Pregenerated sensors for NUDT16L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032566Ensembl transcript IDs: ENSMUST00000035180.5, ENSMUST00000190661.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TCAGCTCTCATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCACCAGCCTCCACCGCCTaGAGCTGCTCTAGTGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SALISKAPKAFPFSPALPPASTA*SCSSVR Trigger: CCTAACACTAGAGCAGCTCCAGGCGGTGGAGGCTGG...TGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATGAGAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR GCA 90 bp | AATCTGGTGTCAGCTCTCATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGTCCTTGGCTTGTGGTaGCCCAGCCTCCACCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NLVSALISKAPKAFPFSPVLGLW*PSLHRL Trigger: CAGGCGGTGGAGGCTGGGGCACCACAAGCCAAGGAC...GGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATGAGAGCTGACACCAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR CCA 90 bp | TCTCATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAATACCCTAGCCCATGGTCCTTaGCTTGTGGTGCCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHLQGPKSISLLTRPPNTLAHGP*LVVPQP Trigger: AGGCTGGGGCACCACAAGCCAAGGACCATGGGCTAG...GGTATTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR TCA 90 bp | CATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAATACCAAGGCATACAGCATCACGTaGCAAAGATGCCGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLQGPKSISLLTRPPNTKAYSIT*QRCRQL Trigger: CAGCTGGCGGCATCTTTGTCACGTGATGCTGTATGC...CTTGGTATTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR TCA 90 bp | CAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAATACCAAGTTCTCTTCGTTCCTTGAGGTCTaGGGCAGTTTCGGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGPKSISLLTRPPNTKFSSFLEV*GSFGSQ Trigger: CTGGCTCCCGAAACTGCCTCAGACCTCAAGGAACGA...AGAGAACTTGGTATTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCTCATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAAGCCCATCAAAGCGCATaGACATCAGCACAGCATAGT | + |
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Preference number: 4 (lower is better) Translates to: QLSSPRPQKHFPSHPPSQAHQSA*TSAQHS Trigger: ACTATGCTGTGCTGATGTCCATGCGCTTTGATGGGC...TTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATGAGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR TCA 90 bp | GCTCTCATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAATACCCTGGCGACACCAATaGAGGAATTCTCCAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: ALISKAPKAFPFSPALPIPWRHQ*RNSPEK Trigger: CTTTTCTGGAGAATTCCTTCATTGGTGTCGCCAGGG...TATTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR TCA 90 bp | TCTCATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAATACCCTAGTGTTAGGCATTTaGCATAGAAATGGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SHLQGPKSISLLTRPPNTLVLGI*HRNGPP Trigger: TGGTGGCCCATTTCTATGTCAAATGCCTAACACTAG...GGTATTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR CCA 90 bp | TTTAATCTGGTGTCAGCTCTCATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCACCACTTTTGATTTaGACTCAGCGAGGGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FNLVSALISKAPKAFPFSPPLLI*TQRGSF Trigger: GAAGCTCCCTCGCTGAGTCCAAATCAAAAGTGGTGG...TGAGAAGGGAAATGCTTTTGGGGCCTTGGAGATGAGAGCTGACACCAGATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS CCA 90 bp | AAGGTGTACAGGGGTACCCGCACCAGGCCCAAGACCTCTAGCCCATaGTCCTTGGCTTGTGGTGCCCCAGCCTCCACCGCCTGGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: KVYRGTRTRPKTSSP*SLACGAPASTAWSC Trigger: GCAGCTCCAGGCGGTGGAGGCTGGGGCACCACAAGCCAAGGACCATGGGCTAGAGGTCTTGGGCCTGGTGCGGGTACCCCTGTACACCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR CAA 90 bp | CAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAATACCAAGTTCTCTCCCATGGTCCTTGGCTaGTGGTGCCCCAGCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: QGPKSISLLTRPPNTKFSPMVLG*WCPSLH Trigger: GTGGAGGCTGGGGCACCACAAGCCAAGGACCATGGG...AGAGAACTTGGTATTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS-3UTR CAA 90 bp | ATCTCCAAGGCCCCAAAAGCATTTCCCTTCTCACCCGCCCTCCCAATACCAAGTAATGGGCCACCACTTTaGATTTGGACTCAGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: ISKAPKAFPFSPALPIPSNGPPL*IWTQRG Trigger: CCCTCGCTGAGTCCAAATCAAAAGTGGTGGCCCATT...ACTTGGTATTGGGAGGGCGGGTGAGAAGGGAAATGCTTTTGGGGCCTTGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS CCA 72 bp | AGGGGTACCCGCACCAGGCCCAAGACCTCTAGCCCATaGTCCTTGGCTTGTGGTGCCCCAGCCTCCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: RGTRTRPKTSSP*SLACGAPASTA Trigger: GGCGGTGGAGGCTGGGGCACCACAAGCCAAGGACCATGGGCTAGAGGTCTTGGGCCTGGTGCGGGTACCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS CAA 90 bp | TACAGGGGTACCCGCACCAGGCCCAAGACCTCTAGCCCATGGTCCTaGGCTTGTGGTGCCCCAGCCTCCACCGCCTGGAGCTGCTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: YRGTRTRPKTSSPWS*ACGAPASTAWSCSS Trigger: ACTAGAGCAGCTCCAGGCGGTGGAGGCTGGGGCACCACAAGCCAAGGACCATGGGCTAGAGGTCTTGGGCCTGGTGCGGGTACCCCTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS CCA 72 bp | TCTTCAACAGTTCCTTATTCAGCCCTTCCTCCAGGCTaGGGCTACGATCGTCCACAAAACCACCAGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSTVPYSALPPG*GYDRPQNHQGS Trigger: GCTTCCCTGGTGGTTTTGTGGACGATCGTAGCCCCAGCCTGGAGGAAGGGCTGAATAAGGAACTGTTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035180.5 ENSMUST00000190661.2 |
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| CDS TCA 72 bp | GGTCTGTTTACGTTGAACTGTTCGTTCCTTGAGGTCTaGGGCAGTTTCGGGAGCCAGAATTCCCAAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GLFTLNCSFLEV*GSFGSQNSQVL Trigger: CAGGACTTGGGAATTCTGGCTCCCGAAACTGCCTCAGACCTCAAGGAACGAACAGTTCAACGTAAACAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035180.5 |
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| CDS TCA 72 bp | CCTCCACCGCCTGGAGCTGCTCTAGTGTTAGGCATTTaGCATAGAAATGGGCCACCACTTTTGATTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: PPPPGAALVLGI*HRNGPPLLIWT Trigger: AGTCCAAATCAAAAGTGGTGGCCCATTTCTATGTCAAATGCCTAACACTAGAGCAGCTCCAGGCGGTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035180.5 ENSMUST00000190661.2 |
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