Pregenerated sensors for NUDT16L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022516Ensembl transcript IDs: ENSMUST00000050881.10, ENSMUST00000229961.2, ENSMUST00000230931.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAAACACACTAGAAGGCACGCGTCTCGGGAATTCCAGGGCCTGTaGGCAGAGACAGCCAAGGGAGGGCAGGGACCTGCACAAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SKHTRRHASREFQGL*AETAKGGQGPAQEA Trigger: TGCTTCTTGTGCAGGTCCCTGCCCTCCCTTGGCTGTCTCTGCCCACAGGCCCTGGAATTCCCGAGACGCGTGCCTTCTAGTGTGTTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR CCA 90 bp | CTTGCCCCACGCTGGGTCAGGCTCTGGGCTAAGGGAAAGAAGGGTTaGTCTAACGTGGGTCATCTCTGTTGGGCAAAACCCATGACCAGT | + |
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Preference number: 1 (lower is better) Translates to: LAPRWVRLWAKGKKG*SNVGHLCWAKPMTS Trigger: ACTGGTCATGGGTTTTGCCCAACAGAGATGACCCACGTTAGACCAACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR TCA 90 bp | AGTCATGAACAGACTCGCACAGGACAGTTTGAGCCCTGGGATGGGTaGGAGCATCTTCAGCTTGAAAAGTTAGGCCCAGGCCCACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: SHEQTRTGQFEPWDG*EHLQLEKLGPGPPP Trigger: TGGGGGTGGGCCTGGGCCTAACTTTTCAAGCTGAAGATGCTCTCACCCATCCCAGGGCTCAAACTGTCCTGTGCGAGTCTGTTCATGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR GCA 90 bp | GGACTGCTTGGGACAGTAATGATGAACAGCTGCCTGCATGTCCCTTaGAGTCAGAAGGGATGCAAAAGCAAACACACTAGAAGGCACGCG | + |
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Preference number: 1 (lower is better) Translates to: GLLGTVMMNSCLHVP*SQKGCKSKHTRRHA Trigger: CGCGTGCCTTCTAGTGTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATCATTACTGTCCCAAGCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR GCA 90 bp | GTAATGATGAACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATaGAAAAGCAAACACACTAGAAGGCACGCGTCTCGGGAATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: VMMNSCLHVPCSQKG*KSKHTRRHASREFQ Trigger: CTGGAATTCCCGAGACGCGTGCCTTCTAGTGTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR CCA 90 bp | ACAGAGAAATCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTaGGTCAGGCTCTGGGCTAAGGGAAAGAAGGGTTGGTCTAACGTG | + |
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Preference number: 1 (lower is better) Translates to: TEKSNKHPNKHLAPR*VRLWAKGKKGWSNV Trigger: CACGTTAGACCAACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGATTTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR TCA 90 bp | TTTTCCGAGGGCATCATGTTGAGTACCTTAAGGGCAAATAGAAGTTaGTATTTGGCAGTGCTGACGAAGGCGTTGCTCAGAAAGTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: FSEGIMLSTLRANRS*YLAVLTKALLRKLG Trigger: TCCTAACTTTCTGAGCAACGCCTTCGTCAGCACTGCCAAATATCAACTTCTATTTGCCCTTAAGGTACTCAACATGATGCCCTCGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGACAGTTTGAGCCCTGGGATGGGTGAGAGCATCTTCAGCTTGAAAAGTGCCCAGGACCCAAGGTaGCTTCTGTGGTGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: AQDSLSPGMGESIFSLKSAQDPR*LLWCQS Trigger: GCTCTGGCACCACAGAAGGCACCTTGGGTCCTGGGC...ACTTTTCAAGCTGAAGATGCTCTCACCCATCCCAGGGCTCAAACTGTCCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAACATCTTGCCCCACGCTGGGTCAGGCTCTGGGCTAAGGGAAAGAAGGGTTGAATTCCAGGGCCTGTaGGCAGAGACAGCCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: INILPHAGSGSGLRERRVEFQGL*AETAKG Trigger: TCCCTTGGCTGTCTCTGCCCACAGGCCCTGGAATTC...AACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTGGAGAGCATCTTCAGCTTaGAAAGTTAGGCCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: KSNKHPNKHLAPRWVRLWRASSA*KVRPRP Trigger: GGGCCTGGGCCTAACTTTTCAAGCTGAAGATGCTCT...CCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR-3UTR CCA 90 bp | AAATCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTGGGTTGCCTTCGAAGAATaGGCTCTAGCTGGGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: KSNKHPNKHLAPRWVRLWVAFEE*ALAGTP Trigger: TGGAGTCCCAGCTAGAGCCCATTCTTCGAAGGCAAC...CCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR-3UTR CCA 90 bp | ATCATGTGGGGCACAGCCATTCTGAAACCAAACCACAGTTCATACACCAAGAACCTTCTGTGTGTACAGTaGGACCCGTACAAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: IMWGTAILKPNHSSYTKNLLCVQ*DPYKAQ Trigger: CTGGGCCTTGTACGGGTCCCACTGTACACACAGAAG...GTTCTTGGTGTATGAACTGTGGTTTGGTTTCAGAATGGCTGTGCCCCACATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCAGAAGGGATGCAAAAGCAAACACACTAGAAGGCACGCGTCTCGGGAATAGGGCAAATAGAAGTTaGTATTTGGCAGTGCTGACG | + |
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Preference number: 2 (lower is better) Translates to: AVRRDAKANTLEGTRLGNRANRS*YLAVLT Trigger: CGTCAGCACTGCCAAATATCAACTTCTATTTGCCCT...ATTCCCGAGACGCGTGCCTTCTAGTGTGTTTGCTTTTGCATCCCTTCTGACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| 3UTR-3UTR CCA 90 bp | ATCATGTGGGGCACAGCCATTCTGAAACCAAACCACAGTTCATACACCAAGAACGTGGGTCATCTCTGTTaGGCAAAACCCATGACCAGT | + |
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Preference number: 2 (lower is better) Translates to: IMWGTAILKPNHSSYTKNVGHLC*AKPMTS Trigger: ACTGGTCATGGGTTTTGCCCAACAGAGATGACCCAC...GTTCTTGGTGTATGAACTGTGGTTTGGTTTCAGAATGGCTGTGCCCCACATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR-3UTR TCA 90 bp | AATCTAACAGAGAAATCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTGGGATATTTGGCAGTGCTaGCGAAGGCGTTGCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: NLTEKSNKHPNKHLAPRWDIWQC*RRRCSE Trigger: TTCTGAGCAACGCCTTCGTCAGCACTGCCAAATATC...CCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGATTTCTCTGTTAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGGGCACAGCCATTCTGAAACCAAACCACAGTTCATACACCAAGAACAAATGCCTGCATGTCCCTTaGAGTCAGAAGGGATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: MWGTAILKPNHSSYTKNKCLHVP*SQKGCK Trigger: TTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCA...TTTGTTCTTGGTGTATGAACTGTGGTTTGGTTTCAGAATGGCTGTGCCCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCACAGTTCATACACCAAGAACAAAATCTAACAGAGAAATCCAACAAGCACAGAGCATCTTCAGCTTaGAAAGTTAGGCCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: KPQFIHQEQNLTEKSNKHRASSA*KVRPRP Trigger: GGGCCTGGGCCTAACTTTTCAAGCTGAAGATGCTCT...GTGCTTGTTGGATTTCTCTGTTAGATTTTGTTCTTGGTGTATGAACTGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR CCA 72 bp | ACTAGAAGGCACGCGTCTCGGGAATTCCAGGGCCTGTaGGCAGAGACAGCCAAGGGAGGGCAGGGACCTGCA | + |
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Preference number: 3 (lower is better) Translates to: TRRHASREFQGL*AETAKGGQGPA Trigger: TGCAGGTCCCTGCCCTCCCTTGGCTGTCTCTGCCCACAGGCCCTGGAATTCCCGAGACGCGTGCCTTCTAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR GCA 72 bp | GATGAGGGCGGGAGCAGCTTTTCTAGAGCCTTCTTCTaGTTCTCTGTTGCTGAGGCCAAGGCCTCGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: DEGGSSFSRAFF*FSVAEAKASAS Trigger: GCTGGCCGAGGCCTTGGCCTCAGCAACAGAGAAGCAGAAGAAGGCTCTAGAAAAGCTGCTCCCGCCCTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| 3UTR CCA 72 bp | CGCTGGGTCAGGCTCTGGGCTAAGGGAAAGAAGGGTTaGTCTAACGTGGGTCATCTCTGTTGGGCAAAACCC | + |
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Preference number: 3 (lower is better) Translates to: RWVRLWAKGKKG*SNVGHLCWAKP Trigger: GGGTTTTGCCCAACAGAGATGACCCACGTTAGACCAACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR TCA 72 bp | CAGACTCGCACAGGACAGTTTGAGCCCTGGGATGGGTaGGAGCATCTTCAGCTTGAAAAGTTAGGCCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: QTRTGQFEPWDG*EHLQLEKLGPG Trigger: GCCTGGGCCTAACTTTTCAAGCTGAAGATGCTCTCACCCATCCCAGGGCTCAAACTGTCCTGTGCGAGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR GCA 72 bp | AACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATaGAAAAGCAAACACACTAGAAGGCACGCGTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: NSCLHVPCSQKG*KSKHTRRHASR Trigger: CCGAGACGCGTGCCTTCTAGTGTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR CCA 72 bp | CCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTaGGCTAAGGGAAAGAAGGGTTGGTCTAACGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: PNKHLAPRWVRL*AKGKKGWSNVG Trigger: ACCCACGTTAGACCAACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR CCA 72 bp | TCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTaGGTCAGGCTCTGGGCTAAGGGAAAGAAGGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: SNKHPNKHLAPR*VRLWAKGKKGW Trigger: CCAACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAATCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTTCTTCTGCTTCTCTGTaGCTGAGGCCAAGGCCTCGG | + |
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Preference number: 3 (lower is better) Translates to: RNPTSTQINILPHAGSGSSSASL*LRPRPR Trigger: CCGAGGCCTTGGCCTCAGCAACAGAGAAGCAGAAGA...AGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| 3UTR GCA 72 bp | TCCCAGGGACTGCTTGGGACAGTAATGATGAACAGCTaGCTGCATGTCCCTTGCAGTCAGAAGGGATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SQGLLGTVMMNS*LHVPCSQKGCK Trigger: TTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATCATTACTGTCCCAAGCAGTCCCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR-3UTR CAA 90 bp | AATCATGTGGGGCACAGCCATTCTGAAACCAAACCACAGTTCATACACCAAGAACTGCCTGCATGTCCCTaGCAGTCAGAAGGGATGCAA | + |
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Preference number: 3 (lower is better) Translates to: NHVGHSHSETKPQFIHQELPACP*QSEGMQ Trigger: TTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAG...TTCTTGGTGTATGAACTGTGGTTTGGTTTCAGAATGGCTGTGCCCCACATGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| 3UTR GCA 72 bp | GGGACAGTAATGATGAACAGCTGCCTGCATGTCCCTTaGAGTCAGAAGGGATGCAAAAGCAAACACACTAGA | + |
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Preference number: 3 (lower is better) Translates to: GTVMMNSCLHVP*SQKGCKSKHTR Trigger: TCTAGTGTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATCATTACTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGAAACCAAACCACAGTTCATACACCAAGAACAAAATCTAACAGAGAAATCCTCCGAGGGCATCATGTaGAGTACCTTAAGGGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: SETKPQFIHQEQNLTEKSSEGIM*STLRAN Trigger: ATTTGCCCTTAAGGTACTCAACATGATGCCCTCGGA...GGATTTCTCTGTTAGATTTTGTTCTTGGTGTATGAACTGTGGTTTGGTTTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| CDS-3UTR TCA 90 bp | AAACATCTTGCCCCACGCTGGGTCAGGCTCTGGGCTAAGGGAAAGAAGGGTTGGATGGCGTGGCATGAATaGCTCCAGCCGGGCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: KHLAPRWVRLWAKGKKGWMAWHE*LQPGPK Trigger: CTTGGGGCCCGGCTGGAGTCATTCATGCCACGCCAT...CCAACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR CCA 90 bp | CTTGCCCCACGCTGGGTCAGGCTCTGGGCTAAGGGAAAGAAGGGTTGGTCTAACAAAGCTGCCCGGGGTTaGCGGCGTATAGCATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LAPRWVRLWAKGKKGWSNKAARG*RRIAWR Trigger: ACGCCATGCTATACGCCGCCAACCCCGGGCAGCTTT...GTTAGACCAACCCTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | CCCACCCCCACTGACCAACCTGAGAGTGTAGCTAGGTCCCAGGGACTGCTTGGGTTGCTTCCTCCCGACTaGTCTGTTTCAGCTCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: PTPTDQPESVARSQGLLGLLPPD*SVSAPE Trigger: TTCCGGAGCTGAAACAGATCAGTCGGGAGGAAGCAA...CCCAAGCAGTCCCTGGGACCTAGCTACACTCTCAGGTTGGTCAGTGGGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | CACCTCAGGATGAGGGCGGGAGCAGCTTTTCTAGAGCCTTCTTCTGCTTCTCTGATGGCGTGGCATGAATaGCTCCAGCCGGGCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: HLRMRAGAAFLEPSSASLMAWHE*LQPGPK Trigger: CTTGGGGCCCGGCTGGAGTCATTCATGCCACGCCAT...CAGAGAAGCAGAAGAAGGCTCTAGAAAAGCTGCTCCCGCCCTCATCCTGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| CDS-3UTR TCA 90 bp | AGACAGCCAAGGGAGGGCAGGGACCTGCACAAGAAGCACCTCAGGATGAGGGCGCATCTGCATCAGCACTaGGAAACGCATGGGGATACG | + |
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Preference number: 4 (lower is better) Translates to: RQPREGRDLHKKHLRMRAHLHQH*ETHGDT Trigger: CGTATCCCCATGCGTTTCTCAGTGCTGATGCAGATG...CGCCCTCATCCTGAGGTGCTTCTTGTGCAGGTCCCTGCCCTCCCTTGGCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| CDS-3UTR TCA 90 bp | AACAGACTCGCACAGGACAGTTTGAGCCCTGGGATGGGTGAGAGCATCTTCAGCCAGACCGTGGTCCCGTaGGTGCACAGCGCTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: NRLAQDSLSPGMGESIFSQTVVP*VHSADL Trigger: GAGATCAGCGCTGTGCACTCACGGGACCACGGTCTG...GCTGAAGATGCTCTCACCCATCCCAGGGCTCAAACTGTCCTGTGCGAGTCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | TCCCTTGCAGTCAGAAGGGATGCAAAAGCAAACACACTAGAAGGCACGCGTCTCCTGCTTCTCTGTTGCTaGGGCCAAGGCCTCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLAVRRDAKANTLEGTRLLLLCC*GQGLGQ Trigger: CTGGCCGAGGCCTTGGCCTCAGCAACAGAGAAGCAG...GAGACGCGTGCCTTCTAGTGTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230931.2 |
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| CDS-3UTR CCA 90 bp | AGTGTAGCTAGGTCCCAGGGACTGCTTGGGACAGTAATGATGAACAGCTGCCTGAAAGCTGCCCGGGGTTaGCGGCGTATAGCATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SVARSQGLLGTVMMNSCLKAARG*RRIAWR Trigger: ACGCCATGCTATACGCCGCCAACCCCGGGCAGCTTT...CAGGCAGCTGTTCATCATTACTGTCCCAAGCAGTCCCTGGGACCTAGCTACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR CCA 90 bp | GCTAGGTCCCAGGGACTGCTTGGGACAGTAATGATGAACAGCTGCCTGCATGTCGAATTCCAGGGCCTGTaGGCAGAGACAGCCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: ARSQGLLGTVMMNSCLHVEFQGL*AETAKG Trigger: TCCCTTGGCTGTCTCTGCCCACAGGCCCTGGAATTC...GACATGCAGGCAGCTGTTCATCATTACTGTCCCAAGCAGTCCCTGGGACCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229961.2 |
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| CDS-3UTR TCA 90 bp | AGAAATCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTCAGACCGTGGTCCCGTaGGTGCACAGCGCTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: RNPTSTQINILPHAGSGSQTVVP*VHSADL Trigger: GAGATCAGCGCTGTGCACTCACGGGACCACGGTCTG...AGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | GATGAACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATGCAAAAGCAAACACAGACCGTGGTCCCGTaGGTGCACAGCGCTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: DEQLPACPLQSEGMQKQTQTVVP*VHSADL Trigger: GAGATCAGCGCTGTGCACTCACGGGACCACGGTCTG...TGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | CCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTGGGCTAAGGGAAAGAAGATACGTCCGAAAAGCTaGCCGGGGTTGGCGGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: PNKHLAPRWVRLWAKGKKIRPKS*PGLAAY Trigger: ATACGCCGCCAACCCCGGGCAGCTTTTCGGACGTAT...CTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | AAGCACCCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTGGGCTAAGGGATTGCTTCCTCCCGACTaGTCTGTTTCAGCTCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: KHPNKHLAPRWVRLWAKGLLPPD*SVSAPE Trigger: TTCCGGAGCTGAAACAGATCAGTCGGGAGGAAGCAA...TCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | CTGCATGTCCCTTGCAGTCAGAAGGGATGCAAAAGCAAACACACTAGAAGGCACCCGTGGTCCCGTGAGTaGACAGCGCTGATCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: LHVPCSQKGCKSKHTRRHPWSRE*TALIST Trigger: TGTGGAGATCAGCGCTGTGCACTCACGGGACCACGG...GTGCCTTCTAGTGTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| CDS-3UTR CCA 90 bp | ATGAACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATGCAAAAGCAAACACAAAGCTGCCCGGGGTTaGCGGCGTATAGCATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: MNSCLHVPCSQKGCKSKHKAARG*RRIAWR Trigger: ACGCCATGCTATACGCCGCCAACCCCGGGCAGCTTT...GTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR CCA 90 bp | CCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTGGGCTAAGGGAAAGAAGCTTCTGTGTGTACAGTaGGACCCGTACAAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PNKHLAPRWVRLWAKGKKLLCVQ*DPYKAQ Trigger: CTGGGCCTTGTACGGGTCCCACTGTACACACAGAAG...CTTCTTTCCCTTAGCCCAGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | AACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATGCAAAAGCAAACACACTATACGTCCGAAAAGCTaGCCGGGGTTGGCGGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: NSCLHVPCSQKGCKSKHTIRPKS*PGLAAY Trigger: ATACGCCGCCAACCCCGGGCAGCTTTTCGGACGTAT...AGTGTGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050881.10 ENSMUST00000230931.2 |
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| 3UTR CAA 72 bp | ACTCCACTAGTCATGAACAGACTCGCACAGGACAGTTaGAGCCCTGGGATGGGTGAGAGCATCTTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TPLVMNRLAQDS*SPGMGESIFSL Trigger: CAAGCTGAAGATGCTCTCACCCATCCCAGGGCTCAAACTGTCCTGTGCGAGTCTGTTCATGACTAGTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | GGGACAGTAATGATGAACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATGCGATATTTGGCAGTGCTaGCGAAGGCGTTGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GTVMMNSCLHVPCSQKGCDIWQC*RRRCSE Trigger: TTCTGAGCAACGCCTTCGTCAGCACTGCCAAATATC...GCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATCATTACTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | CCCACTGACCAACCTGAGAGTGTAGCTAGGTCCCAGGGACTGCTTGGGACAGTAAGGGCAAATAGAAGTTaGTATTTGGCAGTGCTGACG | + |
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Preference number: 4 (lower is better) Translates to: PTDQPESVARSQGLLGTVRANRS*YLAVLT Trigger: CGTCAGCACTGCCAAATATCAACTTCTATTTGCCCT...TACTGTCCCAAGCAGTCCCTGGGACCTAGCTACACTCTCAGGTTGGTCAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | GCTAGGTCCCAGGGACTGCTTGGGACAGTAATGATGAACAGCTGCCTGCATGTCCTGATCTCCACAGCATaGAGTTGTTCCAATGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: ARSQGLLGTVMMNSCLHVLISTA*SCSNVS Trigger: GCTGACATTGGAACAACTGCATGCTGTGGAGATCAG...GACATGCAGGCAGCTGTTCATCATTACTGTCCCAAGCAGTCCCTGGGACCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | AGAAATCCAACAAGCACCCAAATAAACATCTTGCCCCACGCTGGGTCAGGCTCTTTGCTTCCTCCCGACTaGTCTGTTTCAGCTCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: RNPTSTQINILPHAGSGSLLPPD*SVSAPE Trigger: TTCCGGAGCTGAAACAGATCAGTCGGGAGGAAGCAA...AGAGCCTGACCCAGCGTGGGGCAAGATGTTTATTTGGGTGCTTGTTGGATTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | GTGGGGCACAGCCATTCTGAAACCAAACCACAGTTCATACACCAAGAACAAAATCCGTGGTCCCGTGAGTaGACAGCGCTGATCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: VGHSHSETKPQFIHQEQNPWSRE*TALIST Trigger: TGTGGAGATCAGCGCTGTGCACTCACGGGACCACGG...ATTTTGTTCTTGGTGTATGAACTGTGGTTTGGTTTCAGAATGGCTGTGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | AATGATGAACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATGCAAAAGCAACATCTGCATCAGCACTaGGAAACGCATGGGGATACG | + |
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Preference number: 4 (lower is better) Translates to: NDEQLPACPLQSEGMQKQHLHQH*ETHGDT Trigger: CGTATCCCCATGCGTTTCTCAGTGCTGATGCAGATG...TTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | GATGAACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATGCAAAAGCAAACAGATATTTGGCAGTGCTaGCGAAGGCGTTGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DEQLPACPLQSEGMQKQTDIWQC*RRRCSE Trigger: TTCTGAGCAACGCCTTCGTCAGCACTGCCAAATATC...TGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | ATGTGGGGCACAGCCATTCTGAAACCAAACCACAGTTCATACACCAAGAACAAAATACGTCCGAAAAGCTaGCCGGGGTTGGCGGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: MWGTAILKPNHSSYTKNKIRPKS*PGLAAY Trigger: ATACGCCGCCAACCCCGGGCAGCTTTTCGGACGTAT...TTTGTTCTTGGTGTATGAACTGTGGTTTGGTTTCAGAATGGCTGTGCCCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | GATGAACAGCTGCCTGCATGTCCCTTGCAGTCAGAAGGGATGCAAAAGCAAACATCTAGAGCCTTCTTCTaGTTCTCTGTTGCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: DEQLPACPLQSEGMQKQTSRAFF*FSVAEA Trigger: GGCCTCAGCAACAGAGAAGCAGAAGAAGGCTCTAGA...TGTTTGCTTTTGCATCCCTTCTGACTGCAAGGGACATGCAGGCAGCTGTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | GCACAGGACAGTTTGAGCCCTGGGATGGGTGAGAGCATCTTCAGCTTGAAAAGTAGGGCAAATAGAAGTTaGTATTTGGCAGTGCTGACG | + |
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Preference number: 4 (lower is better) Translates to: AQDSLSPGMGESIFSLKSRANRS*YLAVLT Trigger: CGTCAGCACTGCCAAATATCAACTTCTATTTGCCCT...ACTTTTCAAGCTGAAGATGCTCTCACCCATCCCAGGGCTCAAACTGTCCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAACCAAACCACAGTTCATACACCAAGAACAAAATCTAACAGAGAAATCCCCGTGGTCCCGTGAGTaGACAGCGCTGATCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: SETKPQFIHQEQNLTEKSPWSRE*TALIST Trigger: TGTGGAGATCAGCGCTGTGCACTCACGGGACCACGG...GGATTTCTCTGTTAGATTTTGTTCTTGGTGTATGAACTGTGGTTTGGTTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR CCA 90 bp | AAACCACAGTTCATACACCAAGAACAAAATCTAACAGAGAAATCCAACAAGCACCTTCTGTGTGTACAGTaGGACCCGTACAAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KPQFIHQEQNLTEKSNKHLLCVQ*DPYKAQ Trigger: CTGGGCCTTGTACGGGTCCCACTGTACACACAGAAG...GTGCTTGTTGGATTTCTCTGTTAGATTTTGTTCTTGGTGTATGAACTGTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR TCA 90 bp | AAACCACAGTTCATACACCAAGAACAAAATCTAACAGAGAAATCCAACAAGCACCATCTGCATCAGCACTaGGAAACGCATGGGGATACG | + |
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Preference number: 4 (lower is better) Translates to: KPQFIHQEQNLTEKSNKHHLHQH*ETHGDT Trigger: CGTATCCCCATGCGTTTCTCAGTGCTGATGCAGATG...GTGCTTGTTGGATTTCTCTGTTAGATTTTGTTCTTGGTGTATGAACTGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR GCA 90 bp | ACCAAACCACAGTTCATACACCAAGAACAAAATCTAACAGAGAAATCCAACAAGCTGATCTCCACAGCATaGAGTTGTTCCAATGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TKPQFIHQEQNLTEKSNKLISTA*SCSNVS Trigger: GCTGACATTGGAACAACTGCATGCTGTGGAGATCAG...CTTGTTGGATTTCTCTGTTAGATTTTGTTCTTGGTGTATGAACTGTGGTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS TCA 90 bp | CAAGGCCCAGGACCTCCAGACCGTGGTCCCGTGAGTGCACAGCGCTaGTCTCCACAGCATGCAGTTGTTCCAATGTCAGCTGCCGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: QGPGPPDRGPVSAQR*SPQHAVVPMSAAVR Trigger: ACGCACGGCAGCTGACATTGGAACAACTGCATGCTGTGGAGATCAGCGCTGTGCACTCACGGGACCACGGTCTGGAGGTCCTGGGCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS GCA 90 bp | GGGACCCGTACAAGGCCCAGGACCTCCAGACCGTGGTCCCGTGAGTaGACAGCGCTGATCTCCACAGCATGCAGTTGTTCCAATGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GTRTRPRTSRPWSRE*TALISTACSCSNVS Trigger: GCTGACATTGGAACAACTGCATGCTGTGGAGATCAGCGCTGTGCACTCACGGGACCACGGTCTGGAGGTCCTGGGCCTTGTACGGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS GCA 90 bp | TCCAGACCGTGGTCCCGTGAGTGCACAGCGCTGATCTCCACAGCATaGAGTTGTTCCAATGTCAGCTGCCGTGCGTACAGATGTGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SRPWSRECTALISTA*SCSNVSCRAYRCAT Trigger: GGTGGCACATCTGTACGCACGGCAGCTGACATTGGAACAACTGCATGCTGTGGAGATCAGCGCTGTGCACTCACGGGACCACGGTCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS GCA 90 bp | AGCGCTGATCTCCACAGCATGCAGTTGTTCCAATGTCAGCTGCCGTaGGTACAGATGTGCCACCACACGGTGTGGACCCTCAGTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SADLHSMQLFQCQLP*VQMCHHTVWTLSQV Trigger: CACCTGACTGAGGGTCCACACCGTGTGGTGGCACATCTGTACGCACGGCAGCTGACATTGGAACAACTGCATGCTGTGGAGATCAGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS-3UTR CAA 90 bp | GCTAGGTCCCAGGGACTGCTTGGGACAGTAATGATGAACAGCTGCCTGCATGTCTCCGAGGGCATCATGTaGAGTACCTTAAGGGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: ARSQGLLGTVMMNSCLHVSEGIM*STLRAN Trigger: ATTTGCCCTTAAGGTACTCAACATGATGCCCTCGGA...GACATGCAGGCAGCTGTTCATCATTACTGTCCCAAGCAGTCCCTGGGACCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230931.2 |
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| CDS TCA 90 bp | AGAGACAGCCAAGGGAGGGCAGGGACCTTAAGGGCAAATAGAAGTTaGTATTTGGCAGTGCTGACGAAGGCGTTGCTCAGAAAGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: RDSQGRAGTLRANRS*YLAVLTKALLRKLG Trigger: TCCTAACTTTCTGAGCAACGCCTTCGTCAGCACTGCCAAATATCAACTTCTATTTGCCCTTAAGGTCCCTGCCCTCCCTTGGCTGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229961.2 |
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| CDS-3UTR CAA 90 bp | AAACCACAGTTCATACACCAAGAACAAAATCTAACAGAGAAATCCAACAAGCACTCTTCTGCTTCTCTGTaGCTGAGGCCAAGGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: KPQFIHQEQNLTEKSNKHSSASL*LRPRPR Trigger: CCGAGGCCTTGGCCTCAGCAACAGAGAAGCAGAAGA...GTGCTTGTTGGATTTCTCTGTTAGATTTTGTTCTTGGTGTATGAACTGTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230931.2 |
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| CDS TCA 72 bp | CCGGGGTTGGCGGCGTATAGCATGGCGTGGCATGAATaGCTCCAGCCGGGCCCCAAGCGCATTGCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGLAAYSMAWHE*LQPGPKRIASS Trigger: GGAGGAAGCAATGCGCTTGGGGCCCGGCTGGAGTCATTCATGCCACGCCATGCTATACGCCGCCAACCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS CCA 72 bp | AGTGGGACCCGTACAAGGCCCAGGACCTCCAGACCGTaGTCCCGTGAGTGCACAGCGCTGATCTCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SGTRTRPRTSRP*SRECTALISTA Trigger: TGCTGTGGAGATCAGCGCTGTGCACTCACGGGACCACGGTCTGGAGGTCCTGGGCCTTGTACGGGTCCCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS TCA 72 bp | TCCAGCCGGGCCCCAAGCGCATTGCTTCCTCCCGACTaGTCTGTTTCAGCTCCGGAACCGTCGTGGTCGACA | + |
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Preference number: 6 (lower is better) Translates to: SSRAPSALLPPD*SVSAPEPSWST Trigger: TGTCGACCACGACGGTTCCGGAGCTGAAACAGATCAGTCGGGAGGAAGCAATGCGCTTGGGGCCCGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS CCA 72 bp | AGGAAAGCCGCCTACTCGATCCTTCTGTGTGTACAGTaGGACCCGTACAAGGCCCAGGACCTCCAGACCGTG | + |
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Preference number: 6 (lower is better) Translates to: RKAAYSILLCVQ*DPYKAQDLQTV Trigger: CACGGTCTGGAGGTCCTGGGCCTTGTACGGGTCCCACTGTACACACAGAAGGATCGAGTAGGCGGCTTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS TCA 72 bp | CCACCTCCAGACCGTGGTCCCGTGAGTGCACAGCGCTaGTCTCCACAGCATGCAGTTGTTCCAATGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PPPDRGPVSAQR*SPQHAVVPMSA Trigger: AGCTGACATTGGAACAACTGCATGCTGTGGAGATCAGCGCTGTGCACTCACGGGACCACGGTCTGGAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050881.10 |
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| CDS TCA 72 bp | GGACCTCCAGACCGTGGTCCCGTGAGTGCACAGCGCTaGTCTCCACAGCATGCAGTTGTTCCAATGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GPPDRGPVSAQR*SPQHAVVPMSA Trigger: AGCTGACATTGGAACAACTGCATGCTGTGGAGATCAGCGCTGTGCACTCACGGGACCACGGTCTGGAGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS GCA 72 bp | CTCCACAGCATGCAGTTGTTCCAATGTCAGCTGCCGTaGGTACAGATGTGCCACCACACGGTGTGGACCCTC | + |
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Preference number: 6 (lower is better) Translates to: LHSMQLFQCQLP*VQMCHHTVWTL Trigger: GAGGGTCCACACCGTGTGGTGGCACATCTGTACGCACGGCAGCTGACATTGGAACAACTGCATGCTGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS GCA 72 bp | TGGTCCCGTGAGTGCACAGCGCTGATCTCCACAGCATaGAGTTGTTCCAATGTCAGCTGCCGTGCGTACAGA | + |
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Preference number: 6 (lower is better) Translates to: WSRECTALISTA*SCSNVSCRAYR Trigger: TCTGTACGCACGGCAGCTGACATTGGAACAACTGCATGCTGTGGAGATCAGCGCTGTGCACTCACGGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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| CDS GCA 72 bp | CTGATCTCCACAGCATGCAGTTGTTCCAATGTCAGCTaGCGTGCGTACAGATGTGCCACCACACGGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LISTACSCSNVS*RAYRCATTRCG Trigger: TCCACACCGTGTGGTGGCACATCTGTACGCACGGCAGCTGACATTGGAACAACTGCATGCTGTGGAGATCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050881.10 ENSMUST00000229961.2 ENSMUST00000230931.2 |
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