Pregenerated sensors for NUDT15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033405Ensembl transcript IDs: ENSMUST00000043813.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCTGTGCAGGACAGAGATGGCACTGGTGAGAAACCACCTCACATaGAGAGCTCAGCAGGGGCCTGCACAGCAGAAGGGCCAGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: HLCRTEMALVRNHLT*RAQQGPAQQKGQSL Trigger: CAGTGACTGGCCCTTCTGCTGTGCAGGCCCCTGCTGAGCTCTTCATGTGAGGTGGTTTCTCACCAGTGCCATCTCTGTCCTGCACAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 90 bp | CCAGGCATGGTGGCACATGCCCGGTACCTGTGTGGCAGAGGCAGGTaGTGTCTTAGGAGTACTAGGCCAGCTGGTGTTGATGCTGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: PGMVAHARYLCGRGR*CLRSTRPAGVDAGF Trigger: GAACCCAGCATCAACACCAGCTGGCCTAGTACTCCTAAGACATCACCTGCCTCTGCCACACAGGTACCGGGCATGTGCCACCATGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 90 bp | GTAAAGGACCCACATGGCACCTGTGCAGGACAGAGATGGCACTGGTaGGAAACCACCTCACATGAAGAGCTCAGCAGGGGCCTGCACAGC | + |
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Preference number: 1 (lower is better) Translates to: VKDPHGTCAGQRWHW*ETTSHEELSRGLHS Trigger: GCTGTGCAGGCCCCTGCTGAGCTCTTCATGTGAGGTGGTTTCTCACCAGTGCCATCTCTGTCCTGCACAGGTGCCATGTGGGTCCTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CCA 90 bp | GCTGTGCCTGACCAGAGAAAGATGAGGGTCCATGCAACCCAAGCCTaGCTGCTGATCGGCATGAATGGGCTGGTCAGAAGCTTTAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AVPDQRKMRVHATQA*LLIGMNGLVRSFSS Trigger: AGAGCTAAAGCTTCTGACCAGCCCATTCATGCCGATCAGCAGCCAGGCTTGGGTTGCATGGACCCTCATCTTTCTCTGGTCAGGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 90 bp | CTGCTCAGTAACAGAAACTACATCAGCAGAAAGCTATGCTGTGCCTaGCCAGAGAAAGATGAGGGTCCATGCAACCCAAGCCTGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: LLSNRNYISRKLCCA*PEKDEGPCNPSLAA Trigger: AGCAGCCAGGCTTGGGTTGCATGGACCCTCATCTTTCTCTGGTCAGGCACAGCATAGCTTTCTGCTGATGTAGTTTCTGTTACTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR GCA 90 bp | CCTCTGTTTGAACTAGCACAAGGCAATCTATTACGCTCGCCTCCATaGAGCGGACAGCGGAAGCCATGCAGAAGTGCAGATAATGAACTG | + |
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Preference number: 1 (lower is better) Translates to: PLFELAQGNLLRSPP*SGQRKPCRSADNEL Trigger: CAGTTCATTATCTGCACTTCTGCATGGCTTCCGCTGTCCGCTGCATGGAGGCGAGCGTAATAGATTGCCTTGTGCTAGTTCAAACAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 90 bp | CTGGGCTGTGCACCGGAGGTGCGGCCAGCACTCTCCAACTATCTTTaGTGTTTTTGCCCTGATCAAAAATTGACCCATGTGAAACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LGCAPEVRPALSNYL*CFCPDQKLTHVKQE Trigger: TTCCTGTTTCACATGGGTCAATTTTTGATCAGGGCAAAAACATCAAAGATAGTTGGAGAGTGCTGGCCGCACCTCCGGTGCACAGCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR GCA 90 bp | GAAGTGCAGATAATGAACTGCAAGCTCCTTACACACCTTATTCTATaGCACCAGGACAATTCAGCGGCACACCCCAGGAAGAGTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: EVQIMNCKLLTHLIL*HQDNSAAHPRKSFL Trigger: TAAGAAACTCTTCCTGGGGTGTGCCGCTGAATTGTCCTGGTGGCATAGAATAAGGTGTGTAAGGAGCTTGCAGTTCATTATCTGCACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 90 bp | CTACAAATGTTCAGAGATGTCAGACAGTTCACAGAAACGAGCTTATaGAAGAGGAGATGTGGGCTAATGCACTCGGAACCCTTTTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: LQMFRDVRQFTETSL*KRRCGLMHSEPFWV Trigger: CACCCAAAAGGGTTCCGAGTGCATTAGCCCACATCTCCTCTTTCATAAGCTCGTTTCTGTGAACTGTCTGACATCTCTGAACATTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR GCA 90 bp | CATCTGCCTGGGCTGTGCACCGGAGGTGCGGCCAGCACTCTCCAACTATCTTTGAGCTCAGCAGGGGCCTaGACAGCAGAAGGGCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: HLPGLCTGGAASTLQLSLSSAGA*TAEGPV Trigger: GACTGGCCCTTCTGCTGTGCAGGCCCCTGCTGAGCT...CAAAGATAGTTGGAGAGTGCTGGCCGCACCTCCGGTGCACAGCCCAGGCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | CATCTGCCTGGGCTGTGCACCGGAGGTGCGGCCAGCACTCTCCAACTATCTTTGGAACACCCTCTGCTTTaGCAGCAGGCAGCACACAAT | + |
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Preference number: 2 (lower is better) Translates to: HLPGLCTGGAASTLQLSLEHPLL*QQAAHN Trigger: ATTGTGTGCTGCCTGCTGTCAAAGCAGAGGGTGTTC...CAAAGATAGTTGGAGAGTGCTGGCCGCACCTCCGGTGCACAGCCCAGGCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | AACTGGGCTGTGCAGGCACAGCTGACATCAACCATCTGCCTGGGCTGTGCACCGAAGCTATGCTGTGCCTaGCCAGAGAAAGATGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: NWAVQAQLTSTICLGCAPKLCCA*PEKDEG Trigger: ACCCTCATCTTTCTCTGGTCAGGCACAGCATAGCTT...CGGTGCACAGCCCAGGCAGATGGTTGATGTCAGCTGTGCCTGCACAGCCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAAGCTATGCTGTGCCTGACCAGAGAAAGATGAGGGTCCATGCAACCCAAATGCATTGCCCTGTGTaGTCCCAGCACACAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: AESYAVPDQRKMRVHATQMHCPV*SQHTRT Trigger: GGTCCTTGTGTGCTGGGATCACACAGGGCAATGCAT...TTGGGTTGCATGGACCCTCATCTTTCTCTGGTCAGGCACAGCATAGCTTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTATAAGGTACCTAGGTTAGTCTGGGACTTGCAGCCACCTGCCTTGGCCTCTAGAAACCACCTCACATaGAGAGCTCAGCAGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LYKVPRLVWDLQPPALASRNHLT*RAQQGP Trigger: AGGCCCCTGCTGAGCTCTTCATGTGAGGTGGTTTCT...AGAGGCCAAGGCAGGTGGCTGCAAGTCCCAGACTAACCTAGGTACCTTATACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTATAAGGTACCTAGGTTAGTCTGGGACTTGCAGCCACCTGCCTTGGCCTCTTGTGGCAGAGGCAGGTaGTGTCTTAGGAGTACTAGG | + |
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Preference number: 2 (lower is better) Translates to: LYKVPRLVWDLQPPALASCGRGR*CLRSTR Trigger: CCTAGTACTCCTAAGACATCACCTGCCTCTGCCACA...AGAGGCCAAGGCAGGTGGCTGCAAGTCCCAGACTAACCTAGGTACCTTATACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | AACTGGGCTGTGCAGGCACAGCTGACATCAACCATCTGCCTGGGCTGTGCACCGTTGATGTTTTTGCCCTaGTCAAAAATTGACCCATGT | + |
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Preference number: 2 (lower is better) Translates to: NWAVQAQLTSTICLGCAPLMFLP*SKIDPC Trigger: ACATGGGTCAATTTTTGATCAGGGCAAAAACATCAA...CGGTGCACAGCCCAGGCAGATGGTTGATGTCAGCTGTGCCTGCACAGCCCAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR GCA 90 bp | GAACCACAAGTAAAGGACCCACATGGCACCTGTGCAGGACAGAGATGGCACTGGACACACCTTATTCTATaGCACCAGGACAATTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: EPQVKDPHGTCAGQRWHWTHLIL*HQDNSA Trigger: CGCTGAATTGTCCTGGTGGCATAGAATAAGGTGTGT...CCAGTGCCATCTCTGTCCTGCACAGGTGCCATGTGGGTCCTTTACTTGTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CAA 90 bp | GTGGCAGAGGCAGGTGATGTCTTAGGAGTACTAGGCCAGCTGGTGTaGATGCTGGGTTCTAAGGACAAGCAGCAAGCACTCTTAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: VAEAGDVLGVLGQLV*MLGSKDKQQALLTN Trigger: ATTTGTTAAGAGTGCTTGCTGCTTGTCCTTAGAACCCAGCATCAACACCAGCTGGCCTAGTACTCCTAAGACATCACCTGCCTCTGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR GCA 90 bp | AAGAAACAGCATAAACCACAAAGTGAACCTGGCCATCTACTCTTGAGTACCCGTCTGACATCAACCATCTaGCTGGGCTGTGCACCGGAG | + |
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Preference number: 2 (lower is better) Translates to: KKQHKPQSEPGHLLLSTRLTSTI*LGCAPE Trigger: CTCCGGTGCACAGCCCAGGCAGATGGTTGATGTCAG...ACGGGTACTCAAGAGTAGATGGCCAGGTTCACTTTGTGGTTTATGCTGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR GCA 90 bp | AAGAAACAGCATAAACCACAAAGTGAACCTGGCCATCTACTCTTGAGTACCCGTGGACAGCGGAAGCCATaGAGAAGTGCAGATAATGAA | + |
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Preference number: 2 (lower is better) Translates to: KKQHKPQSEPGHLLLSTRGQRKP*RSADNE Trigger: TTCATTATCTGCACTTCTGCATGGCTTCCGCTGTCC...ACGGGTACTCAAGAGTAGATGGCCAGGTTCACTTTGTGGTTTATGCTGTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACAGCATAAACCACAAAGTGAACCTGGCCATCTACTCTTGAGTACCCGTCTCTCCAACTATCTTTaGTGTTTTTGCCCTGATCAA | + |
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Preference number: 2 (lower is better) Translates to: KKQHKPQSEPGHLLLSTRLSNYL*CFCPDQ Trigger: TTGATCAGGGCAAAAACATCAAAGATAGTTGGAGAG...ACGGGTACTCAAGAGTAGATGGCCAGGTTCACTTTGTGGTTTATGCTGTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | GAACTCTTCAGTGAGAAAGTCATTTTAGATTTTGGCAAATCTCTTCAATGTCTGCAGAGATGGCACTGGTaGGAAACCACCTCACATGAA | + |
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Preference number: 2 (lower is better) Translates to: ELFSEKVILDFGKSLQCLQRWHW*ETTSHE Trigger: TTCATGTGAGGTGGTTTCTCACCAGTGCCATCTCTG...CAGACATTGAAGAGATTTGCCAAAATCTAAAATGACTTTCTCACTGAAGAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACAGCATAAACCACAAAGTGAACCTGGCCATCTACTCTTGAGTACCCGTTGTAGGTATAAGAGATaGGACATAGATATACAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KKQHKPQSEPGHLLLSTRCRYKR*DIDIQH Trigger: GTGCTGTATATCTATGTCTCATCTCTTATACCTACA...ACGGGTACTCAAGAGTAGATGGCCAGGTTCACTTTGTGGTTTATGCTGTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR GCA 72 bp | GCAGGCACAGCTGACATCAACCATCTGCCTGGGCTGTaGACCGGAGGTGCGGCCAGCACTCTCCAACTATCT | + |
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Preference number: 3 (lower is better) Translates to: AGTADINHLPGL*TGGAASTLQLS Trigger: AGATAGTTGGAGAGTGCTGGCCGCACCTCCGGTGCACAGCCCAGGCAGATGGTTGATGTCAGCTGTGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | GTGATCCCAGCACACAAGGACCCCAGTCTCAGGCTGTaGAAGGGAGATGCAGAGGACCTGGCCGTTAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VIPAHKDPSLRL*KGDAEDLAVSG Trigger: GCCACTAACGGCCAGGTCCTCTGCATCTCCCTTTCACAGCCTGAGACTGGGGTCCTTGTGTGCTGGGATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | GTGGCACATGCCCGGTACCTGTGTGGCAGAGGCAGGTaGTGTCTTAGGAGTACTAGGCCAGCTGGTGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: VAHARYLCGRGR*CLRSTRPAGVD Trigger: ATCAACACCAGCTGGCCTAGTACTCCTAAGACATCACCTGCCTCTGCCACACAGGTACCGGGCATGTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CCA 72 bp | GACCAGAGAAAGATGAGGGTCCATGCAACCCAAGCCTaGCTGCTGATCGGCATGAATGGGCTGGTCAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: DQRKMRVHATQA*LLIGMNGLVRS Trigger: GCTTCTGACCAGCCCATTCATGCCGATCAGCAGCCAGGCTTGGGTTGCATGGACCCTCATCTTTCTCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | CCAAAGTCCTCTCTCAAGCCAGAACACCCTCTGCTTTaGCAGCAGGCAGCACACAATGCAGTCCTCGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: PKSSLKPEHPLL*QQAAHNAVLGD Trigger: GTCTCCGAGGACTGCATTGTGTGCTGCCTGCTGTCAAAGCAGAGGGTGTTCTGGCTTGAGAGAGGACTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR GCA 72 bp | TACTTAAATCCCACATGTTCCAGGCATGGTGGCACATaGCCGGTACCTGTGTGGCAGAGGCAGGTGATGTCT | + |
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Preference number: 3 (lower is better) Translates to: YLNPTCSRHGGT*PVPVWQRQVMS Trigger: AGACATCACCTGCCTCTGCCACACAGGTACCGGGCATGTGCCACCATGCCTGGAACATGTGGGATTTAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTATAAGGTACCTAGGTTAGTCTGGGACTTGCAGCCACCTGCCTTGGCCTCTCTAGGCCAGCTGGTGTaGATGCTGGGTTCTAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LYKVPRLVWDLQPPALASLGQLV*MLGSKD Trigger: GTCCTTAGAACCCAGCATCAACACCAGCTGGCCTAG...AGAGGCCAAGGCAGGTGGCTGCAAGTCCCAGACTAACCTAGGTACCTTATACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CCA 72 bp | AGATTCTTACTTAAATCCCACATGTTCCAGGCATGGTaGCACATGCCCGGTACCTGTGTGGCAGAGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: RFLLKSHMFQAW*HMPGTCVAEAG Trigger: ACCTGCCTCTGCCACACAGGTACCGGGCATGTGCCACCATGCCTGGAACATGTGGGATTTAAGTAAGAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR CAA 90 bp | GCACGATGCGGTCCTCAGGCCAAGAACACGATTCTCTTAAACCCAAAGTCCTCTAGAACACCCTCTGCTTaGACAGCAGGCAGCACACAA | + |
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Preference number: 3 (lower is better) Translates to: ARCGPQAKNTILLNPKSSRTPSA*TAGSTQ Trigger: TTGTGTGCTGCCTGCTGTCAAAGCAGAGGGTGTTCT...AGAGGACTTTGGGTTTAAGAGAATCGTGTTCTTGGCCTGAGGACCGCATCGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR CAA 90 bp | TACTCTCACACTTACACGGGGTCTCTCAGACACCAGGGGAATGTAGCCTACTGCAGGAAAACATCAAGCTaGATGAACTTGGCAGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: YSHTYTGSLRHQGNVAYCRKTSS*MNLAVG Trigger: GCCTACTGCCAAGTTCATCAAGCTTGATGTTTTCCT...GCAGTAGGCTACATTCCCCTGGTGTCTGAGAGACCCCGTGTAAGTGTGAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | GCACCGGAGGTGCGGCCAGCACTCTCCAACTATCTTTaGTGTTTTTGCCCTGATCAAAAATTGACCCATGTG | + |
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Preference number: 3 (lower is better) Translates to: APEVRPALSNYL*CFCPDQKLTHV Trigger: CACATGGGTCAATTTTTGATCAGGGCAAAAACATCAAAGATAGTTGGAGAGTGCTGGCCGCACCTCCGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | GGTGGGCGATGTAGCTTAAATCAGCATCAGGGCAGCTaGGGCAAGACTGGAAGTTCAAGGTTATCCTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: GGRCSLNQHQGS*GKTGSSRLSLA Trigger: AGCTAAGGATAACCTTGAACTTCCAGTCTTGCCTCAGCTGCCCTGATGCTGATTTAAGCTACATCGCCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CCA 72 bp | AATAGATTCTTACTTAAATCCCACATGTTCCAGGCATaGTGGCACATGCCCGGTACCTGTGTGGCAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: NRFLLKSHMFQA*WHMPGTCVAEA Trigger: TGCCTCTGCCACACAGGTACCGGGCATGTGCCACCATGCCTGGAACATGTGGGATTTAAGTAAGAATCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR CAA 90 bp | GCACGATGCGGTCCTCAGGCCAAGAACACGATTCTCTTAAACCCAAAGTCCTCTGTAGGCGCCTTGCTTTaGAACTTGAATGGCCATATT | + |
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Preference number: 3 (lower is better) Translates to: ARCGPQAKNTILLNPKSSVGALL*NLNGHI Trigger: AATATGGCCATTCAAGTTCAAAAGCAAGGCGCCTAC...AGAGGACTTTGGGTTTAAGAGAATCGTGTTCTTGGCCTGAGGACCGCATCGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | AACAGAAACTACATCAGCAGAAAGCTATGCTGTGCCTaGCCAGAGAAAGATGAGGGTCCATGCAACCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: NRNYISRKLCCA*PEKDEGPCNPS Trigger: GCTTGGGTTGCATGGACCCTCATCTTTCTCTGGTCAGGCACAGCATAGCTTTCTGCTGATGTAGTTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR GCA 72 bp | ATAATGAACTGCAAGCTCCTTACACACCTTATTCTATaGCACCAGGACAATTCAGCGGCACACCCCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: IMNCKLLTHLIL*HQDNSAAHPRK Trigger: CTTCCTGGGGTGTGCCGCTGAATTGTCCTGGTGGCATAGAATAAGGTGTGTAAGGAGCTTGCAGTTCATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR GCA 72 bp | AGAACACCCTCTGCTTTGACAGCAGGCAGCACACAATaGAGTCCTCGGAGACATTTCACTGTTCAATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RTPSALTAGSTQ*SPRRHFTVQSL Trigger: AAGAGATTGAACAGTGAAATGTCTCCGAGGACTGCATTGTGTGCTGCCTGCTGTCAAAGCAGAGGGTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | TTCAGAGATGTCAGACAGTTCACAGAAACGAGCTTATaGAAGAGGAGATGTGGGCTAATGCACTCGGAACCC | + |
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Preference number: 3 (lower is better) Translates to: FRDVRQFTETSL*KRRCGLMHSEP Trigger: GGGTTCCGAGTGCATTAGCCCACATCTCCTCTTTCATAAGCTCGTTTCTGTGAACTGTCTGACATCTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGAAAGCTATGCTGTGCCTGACCAGAGAAAGATGAGGGTCCATGCAACCCAAAGTTTCTTAAGGTTCTaGAGTTATATCAGGAGACTG | + |
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Preference number: 3 (lower is better) Translates to: AESYAVPDQRKMRVHATQSFLRF*SYIRRL Trigger: CAGTCTCCTGATATAACTCAAGAACCTTAAGAAACT...TTGGGTTGCATGGACCCTCATCTTTCTCTGGTCAGGCACAGCATAGCTTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR-3UTR CAA 90 bp | GAACTCTTCAGTGAGAAAGTCATTTTAGATTTTGGCAAATCTCTTCAATGTCTGAGTCTGTTATGGCACTaGCCTGTCATGTGCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: ELFSEKVILDFGKSLQCLSLLWH*PVMCQA Trigger: GGCTTGGCACATGACAGGCAAGTGCCATAACAGACT...CAGACATTGAAGAGATTTGCCAAAATCTAAAATGACTTTCTCACTGAAGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | GCCAGCACTCTCCAACTATCTTTGATGTTTTTGCCCTaGTCAAAAATTGACCCATGTGAAACAGGAATACTG | + |
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Preference number: 3 (lower is better) Translates to: ASTLQLSLMFLP*SKIDPCETGIL Trigger: CAGTATTCCTGTTTCACATGGGTCAATTTTTGATCAGGGCAAAAACATCAAAGATAGTTGGAGAGTGCTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR TCA 72 bp | ACCTGGCCATCTACTCTTGAGTACCCGTTAACATTCTaGAATAGATTCTTACTTAAATCCCACATGTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TWPSTLEYPLTF*NRFLLKSHMFQ Trigger: CTGGAACATGTGGGATTTAAGTAAGAATCTATTTCAGAATGTTAACGGGTACTCAAGAGTAGATGGCCAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| CDS-3UTR CCA 90 bp | GAACCACAAGTAAAGGACCCACATGGCACCTGTGCAGGACAGAGATGGCACTGGGCCGACCCCAACTCCTaGCCGCCGCCTCGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: EPQVKDPHGTCAGQRWHWADPNS*PPPRLC Trigger: GCAGAGCCGAGGCGGCGGCCAGGAGTTGGGGTCGGC...CCAGTGCCATCTCTGTCCTGCACAGGTGCCATGTGGGTCCTTTACTTGTGGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| CDS-3UTR CCA 90 bp | ACACAAGGACCCCAGTCTCAGGCTGTGAAAGGGAGATGCAGAGGACCTGGCCGTTGGCCCCCAGGAAGCTaGAAACTGCCGGCTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: TQGPQSQAVKGRCRGPGRWPPGS*KLPAPN Trigger: GTTTGGAGCCGGCAGTTTCCAGCTTCCTGGGGGCCA...ACGGCCAGGTCCTCTGCATCTCCCTTTCACAGCCTGAGACTGGGGTCCTTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CAA 72 bp | GCAGGTGATGTCTTAGGAGTACTAGGCCAGCTGGTGTaGATGCTGGGTTCTAAGGACAAGCAGCAAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: AGDVLGVLGQLV*MLGSKDKQQAL Trigger: GAGTGCTTGCTGCTTGTCCTTAGAACCCAGCATCAACACCAGCTGGCCTAGTACTCCTAAGACATCACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| CDS-3UTR CCA 90 bp | CATCTGCCTGGGCTGTGCACCGGAGGTGCGGCCAGCACTCTCCAACTATCTTTGCAGGTCCTCTTTAAATaGGTCATAACCTTGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HLPGLCTGGAASTLQLSLQVLFK*VITLLF Trigger: AAAGAGCAAGGTTATGACCCATTTAAAGAGGACCTG...CAAAGATAGTTGGAGAGTGCTGGCCGCACCTCCGGTGCACAGCCCAGGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CAA 72 bp | CCCTGCTTGTATAAGGTACCTAGGTTAGTCTGGGACTaGCAGCCACCTGCCTTGGCCTCTTACTGTAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PCLYKVPRLVWD*QPPALASYCSF Trigger: GAAACTACAGTAAGAGGCCAAGGCAGGTGGCTGCAAGTCCCAGACTAACCTAGGTACCTTATACAAGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| CDS-3UTR CCA 90 bp | GCACGATGCGGTCCTCAGGCCAAGAACACGATTCTCTTAAACCCAAAGTCCTCTAGAGCCCAGAAAAGCTaGTCTAAGGGAGGGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: ARCGPQAKNTILLNPKSSRAQKS*SKGGNS Trigger: AGAATTCCCTCCCTTAGACCAGCTTTTCTGGGCTCT...AGAGGACTTTGGGTTTAAGAGAATCGTGTTCTTGGCCTGAGGACCGCATCGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| CDS-3UTR CCA 90 bp | TTGTATAAGGTACCTAGGTTAGTCTGGGACTTGCAGCCACCTGCCTTGGCCTCTCGGTACCCTTCCAGGTaGTTCAGGTCCTCTTTAAAT | + |
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Preference number: 4 (lower is better) Translates to: LYKVPRLVWDLQPPALASRYPSR*FRSSLN Trigger: ATTTAAAGAGGACCTGAACCACCTGGAAGGGTACCG...AGAGGCCAAGGCAGGTGGCTGCAAGTCCCAGACTAACCTAGGTACCTTATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CAA 72 bp | TCTCTAACTGCCTCTGCATTTAGTCTGTTATGGCACTaGCCTGTCATGTGCCAAGCCCCAAGTTCAACCCTA | + |
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Preference number: 4 (lower is better) Translates to: SLTASAFSLLWH*PVMCQAPSSTL Trigger: TAGGGTTGAACTTGGGGCTTGGCACATGACAGGCAAGTGCCATAACAGACTAAATGCAGAGGCAGTTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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| 3UTR CAA 72 bp | TTCACTGTTCAATCTCTTACAGTAAAAGCTTACAATTaGCTAGGGGGAGAAAGCAGCCAACCAACCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: FTVQSLTVKAYN*LGGESSQPTFG Trigger: GCCAAAGGTTGGTTGGCTGCTTTCTCCCCCTAGCAAATTGTAAGCTTTTACTGTAAGAGATTGAACAGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043813.3 |
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