Pregenerated sensors for NUDT12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024228Ensembl transcript IDs: ENSMUST00000025065.12, ENSMUST00000174122.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCAGAAGGGGGTGTTaGATCCCTGAAGTTGTAGTTGCATGTGGTTGTGGCCTACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: YVSVSETPAEARRGC*IPEVVVACGCGLPE Trigger: CTCAGGTAGGCCACAACCACATGCAACTACAACTTCAGGGATCCAACACCCCCTTCTGGCCTCTGCAGGCGTCTCTGACACAGACACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR GCA 90 bp | GGAGTTGGCTTGGGATGTAACTGTGCCGTCCCAGATACAATGGTGTaGACCTGTTCTTTAGTTCTCTACCCATGGGTACAGGATTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: GVGLGCNCAVPDTMV*TCSLVLYPWVQDSE Trigger: CTCAGAATCCTGTACCCATGGGTAGAGAACTAAAGAACAGGTGCACACCATTGTATCTGGGACGGCACAGTTACATCCCAAGCCAACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR GCA 90 bp | GCTGCTGAAAGGGTTGCAGAGGATCGGAACTCAAGTACTCATGCTTaGACAGCAAGCACCTTAATGACAGAGCCATTTTCTGGCTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: AAERVAEDRNSSTHA*TASTLMTEPFSGSL Trigger: TAAGGAGCCAGAAAATGGCTCTGTCATTAAGGTGCTTGCTGTGCAAGCATGAGTACTTGAGTTCCGATCCTCTGCAACCCTTTCAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR TCA 90 bp | GTAGAGGTAGAGGTAGAGGTAGAGGTAGAGGTGTATATTTGCTTATaGACATCATTAATAAGCAGATACTGGCTAAAATGTACACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: VEVEVEVEVEVYICL*TSLISRYWLKCTLV Trigger: CACAAGTGTACATTTTAGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCTACCTCTACCTCTACCTCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR CCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGACTCACCAGACTGTCTaGCCAACAAGCCCCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GVYLDHSSYVSVSETPAETHQTV*PTSPQD Trigger: ATCCTGGGGGCTTGTTGGCCAGACAGTCTGGTGAGT...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGCCAGATACAATGGTGTaGACCTGTTCTTTAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GVYLDHSSYVSVSETPAEPDTMV*TCSLVL Trigger: GAGAACTAAAGAACAGGTGCACACCATTGTATCTGG...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGTCAAGTACTCATGCTTaGACAGCAAGCACCTTAATG | + |
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Preference number: 2 (lower is better) Translates to: GVYLDHSSYVSVSETPAESSTHA*TASTLM Trigger: CATTAAGGTGCTTGCTGTGCAAGCATGAGTACTTGA...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR TCA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCAAATCCGCTCTTTCCATaGGATGAACTAAGGTTTATC | + |
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Preference number: 2 (lower is better) Translates to: CTSIILVMCLCQRRLQRPNPLFP*DELRFI Trigger: GATAAACCTTAGTTCATCTCATGGAAAGAGCGGATT...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGTGTGTCAGAGACGCCTaGAGAGGCCAGAAGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: WATFVHQIKILILSPDMVCVRDA*RGQKGV Trigger: CACCCCCTTCTGGCCTCTGCAGGCGTCTCTGACACA...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR TCA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCATACATGGGAAAACTGTaGAAATCTGCAATAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: CTSIILVMCLCQRRLQRPYMGKL*KSAIAF Trigger: GAAAGCTATTGCAGATTTTCACAGTTTTCCCATGTA...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGACTAAACACAGCTGCTaGAAGGGTTGCAGAGGATCG | + |
|
Preference number: 2 (lower is better) Translates to: WATFVHQIKILILSPDMVTKHSC*KGCRGS Trigger: CGATCCTCTGCAACCCTTTCAGCAGCTGTGTTTAGT...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTCATCGCTCCAGTTTATaGAACTATGAATTCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RGRGVYLLMNIINKQILAHRSSL*NYEFCC Trigger: ACAACAGAATTCATAGTTTCATAAACTGGAGCGATG...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGTTGCCCCTTGCTAACTaGTTAACGATTTATATTTAC | + |
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Preference number: 2 (lower is better) Translates to: WATFVHQIKILILSPDMVLPLAN*LTIYIY Trigger: GTAAATATAAATCGTTAACCAGTTAGCAAGGGGCAA...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR CCA 72 bp | GGCCTGTTATTGCGCTCAGTGACTCACCAGACTGTCTaGCCAACAAGCCCCCAGGATCCTCATACCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GLLLRSVTHQTV*PTSPQDPHTSA Trigger: AGCAGAGGTATGAGGATCCTGGGGGCTTGTTGGCCAGACAGTCTGGTGAGTCACTGAGCGCAATAACAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR CCA 72 bp | GTGTCAGAGACGCCTGCAGAGGCCAGAAGGGGGTGTTaGATCCCTGAAGTTGTAGTTGCATGTGGTTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VSETPAEARRGC*IPEVVVACGCG Trigger: GCCACAACCACATGCAACTACAACTTCAGGGATCCAACACCCCCTTCTGGCCTCTGCAGGCGTCTCTGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR CAA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGATGTAGGAGTTGGCTaGGGATGTAACTGTGCCGTC | + |
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Preference number: 3 (lower is better) Translates to: GVYLDHSSYVSVSETPAEDVGVG*GCNCAV Trigger: GACGGCACAGTTACATCCCAAGCCAACTCCTACATC...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR GCA 72 bp | TTGGGATGTAACTGTGCCGTCCCAGATACAATGGTGTaGACCTGTTCTTTAGTTCTCTACCCATGGGTACAG | + |
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Preference number: 3 (lower is better) Translates to: LGCNCAVPDTMV*TCSLVLYPWVQ Trigger: CTGTACCCATGGGTAGAGAACTAAAGAACAGGTGCACACCATTGTATCTGGGACGGCACAGTTACATCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR CAA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGAGTCAGGTGAAGAATaGGATAGTCATCACGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: GVYLDHSSYVSVSETPAEESGEE*DSHHVS Trigger: AGACACGTGATGACTATCCAATTCTTCACCTGACTC...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR GCA 72 bp | AGGGTTGCAGAGGATCGGAACTCAAGTACTCATGCTTaGACAGCAAGCACCTTAATGACAGAGCCATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: RVAEDRNSSTHA*TASTLMTEPFS Trigger: AGAAAATGGCTCTGTCATTAAGGTGCTTGCTGTGCAAGCATGAGTACTTGAGTTCCGATCCTCTGCAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR CAA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCACCAACATGGTCTTTCTaGGTAGAAATACAGTTAGTT | + |
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Preference number: 3 (lower is better) Translates to: CTSIILVMCLCQRRLQRPPTWSF*VEIQLV Trigger: AACTAACTGTATTTCTACCAAGAAAGACCATGTTGG...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR TCA 72 bp | CCTATCTCCCACAAGGAATCCGCTCTTTCCATGAGATaGACTAAGGTTTATCTCGTTTATGGAGCACACTTC | + |
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Preference number: 3 (lower is better) Translates to: PISHKESALSMR*TKVYLVYGAHF Trigger: GAAGTGTGCTCCATAAACGAGATAAACCTTAGTTCATCTCATGGAAAGAGCGGATTCCTTGTGGGAGATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTCTCAAGTACTCATGCTaGCACAGCAAGCACCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: RGRGVYLLMNIINKQILALKYSC*HSKHLN Trigger: ATTAAGGTGCTTGCTGTGCAAGCATGAGTACTTGAG...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTATTTTTATTGAATACTaGTGTGACACTTGCCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: RGRGVYLLMNIINKQILAIFIEY*CDTCPL Trigger: CAAGGGGCAAGTGTCACACAAGTATTCAATAAAAAT...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR TCA 72 bp | GAGGTAGAGGTAGAGGTAGAGGTGTATATTTGCTTATaGACATCATTAATAAGCAGATACTGGCTAAAATGT | + |
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Preference number: 3 (lower is better) Translates to: EVEVEVEVYICL*TSLISRYWLKC Trigger: ACATTTTAGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCTACCTCTACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR CCA 72 bp | GAGTACCTTGGAGGCATTACAGAAGTAAATTACCAGTaGGCTACATTTGTGCACCAAATCAAAATTTTAATT | + |
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Preference number: 3 (lower is better) Translates to: EYLGGITEVNYQ*ATFVHQIKILI Trigger: AATTAAAATTTTGATTTGGTGCACAAATGTAGCCCACTGGTAATTTACTTCTGTAATGCCTCCAAGGTACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| 3UTR CAA 72 bp | TGCTCTTCACCTCTGGTCCCTCTCCAGCTTTCCGCCTaGTGTGCTGAGACAAGGCCTGTTATTGCGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: CSSPLVPLQLSA*CAETRPVIALS Trigger: ACTGAGCGCAATAACAGGCCTTGTCTCAGCACACAAGGCGGAAAGCTGGAGAGGGACCAGAGGTGAAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGGTCCTCCTCTTCCTCTaGGACTCCTCCCGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMVLLFL*DSSRLG Trigger: GCCCAGGCGGGAGGAGTCCCAGAGGAAGAGGAGGAC...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGCGCACTGCCACAGGTTaGGCAGAACTTGTATCGACT | + |
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Preference number: 4 (lower is better) Translates to: GVYLDHSSYVSVSETPAERTATG*AELVST Trigger: AGTCGATACAAGTTCTGCCCAACCTGTGGCAGTGCG...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTGTCCTCCTCTTCCTCTaGGACTCCTCCCGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FLLYATVLTELYVSYAAFVLLFL*DSSRLG Trigger: GCCCAGGCGGGAGGAGTCCCAGAGGAAGAGGAGGAC...AAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGGAGGGCATTGGCCATaGTTGACAAGAGACATACTG | + |
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Preference number: 4 (lower is better) Translates to: GVYLDHSSYVSVSETPAEGGHWP*LTRDIL Trigger: CAGTATGTCTCTTGTCAACCATGGCCAATGCCCTCC...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGATAGCTCGGCTTGGTaGCACAAAGAATGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GVYLDHSSYVSVSETPAEDSSAW*HKECLL Trigger: CAGCAAGCATTCTTTGTGCCACCAAGCCGAGCTATC...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR GCA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCATGGTGGCACAAAGAATaGTTGCTGCTTCCCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: CTSIILVMCLCQRRLQRPWWHKE*LLLPFG Trigger: ACCAAAGGGAAGCAGCAAGCATTCTTTGTGCCACCA...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGCGGGATGCCCGTTCCTaGCGGCGTACATTAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMRDARS*RRTLKQ Trigger: CTGCTTTAATGTACGCCGCCAGGAACGGGCATCCCG...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR GCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGGAATCGCTTTTGCCTaGCTAGAAGACATTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GVYLDHSSYVSVSETPAEGIAFA*LEDIWF Trigger: GAACCAAATGTCTTCTAGGCAGGCAAAAGCGATTCC...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR GCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGGCACAAAGAATGCTTaGTGCTTCCCTTTGGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: GVYLDHSSYVSVSETPAEGTKNA*CFPLVR Trigger: TCTTACCAAAGGGAAGCAGCAAGCATTCTTTGTGCC...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR GCA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCAACAAAGAATGCTTGCTaGTTCCCTTTGGTAAGAACG | + |
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Preference number: 4 (lower is better) Translates to: CTSIILVMCLCQRRLQRPTKNAC*FPLVRT Trigger: CGTTCTTACCAAAGGGAAGCAGCAAGCATTCTTTGT...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGATTTCCCTCTGCGGCTaGACTGTGGAGTTCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMISLCG*TVEFRN Trigger: ATTTCTGAACTCCACAGTTCAGCCGCAGAGGGAAAT...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR TCA 90 bp | AGTGTTAAAATAACAATCATTGCCAACACTGCTCAGATGACACTAGGAGTGACACAAGGAACACCAAGGTaGTCTTCTCAGGCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SVKITIIANTAQMTLGVTQGTPR*SSQAEP Trigger: TGGCTCAGCCTGAGAAGATCACCTTGGTGTTCCTTG...TGTCACTCCTAGTGTCATCTGAGCAGTGTTGGCAATGATTGTTATTTTAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR TCA 90 bp | TTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTCAAGGAACACCAAGGTaGTCTTCTCAGGCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FCFMPRYLLNCMSHMLPFQGTPR*SSQAEP Trigger: TGGCTCAGCCTGAGAAGATCACCTTGGTGTTCCTTG...AAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR TCA 90 bp | TTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTATGCCAGGCAAGCACTaGTCTTGCTTGAGCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: FFCFMPRYLLNCMSHMLPMPGKH*SCLSYH Trigger: GTGGTAGCTCAAGCAAGATCAGTGCTTGCCTGGCAT...AGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR GCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGCCTATAACCCCAAAATaGAGCAATATCCAGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMPITPK*SNIQGG Trigger: ACCGCCCTGGATATTGCTGCATTTTGGGGTTATAGG...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR GCA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGCAATTTTCATGTCTTTaGTTAAACTCCTCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GVYLDHSSYVSVSETPAEQFSCL*LNSSAA Trigger: TGCTGCTGAGGAGTTTAAGCAAAGACATGAAAATTG...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | AGTGTTAAAATAACAATCATTGCCAACACTGCTCAGATGACACTAGGAGTGACATTCTCAAGCAGAAACTaGACCACATCGGGATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SVKITIIANTAQMTLGVTFSSRN*TTSGCP Trigger: CGGGCATCCCGATGTGGTCCAGTTTCTGCTTGAGAA...TGTCACTCCTAGTGTCATCTGAGCAGTGTTGGCAATGATTGTTATTTTAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTTCTCAAGCAGAAACTaGACCACATCGGGATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FLLYATVLTELYVSYAAFFSSRN*TTSGCP Trigger: CGGGCATCCCGATGTGGTCCAGTTTCTGCTTGAGAA...AAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGCAGAAGAGCTGGCATTaGCGGGTGGAGAAAATAACA | + |
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Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMQKSWH*RVEKIT Trigger: TGTTATTTTCTCCACCCGCCAATGCCAGCTCTTCTG...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTCGCACTGCCACAGGTTaGGCAGAACTTGTATCGACT | + |
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Preference number: 4 (lower is better) Translates to: FLLYATVLTELYVSYAAFRTATG*AELVST Trigger: AGTCGATACAAGTTCTGCCCAACCTGTGGCAGTGCG...AAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGCAGGGGGTTCAAGTCTaGGAAAAGGAGATAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMQGVQV*EKEINC Trigger: ACAGTTTATCTCCTTTTCTCAGACTTGAACCCCCTG...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR GCA 90 bp | AGTGTTAAAATAACAATCATTGCCAACACTGCTCAGATGACACTAGGAGTGACACGGACTTCCGGCTGCTaGGAGCTTTCTTTATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SVKITIIANTAQMTLGVTRTSGC*ELSLLP Trigger: TGGTAATAAAGAAAGCTCGCAGCAGCCGGAAGTCCG...TGTCACTCCTAGTGTCATCTGAGCAGTGTTGGCAATGATTGTTATTTTAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTATTTCCCTCTGCGGCTaGACTGTGGAGTTCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCFMPRYLLNCMSHMLPFISLCG*TVEFRN Trigger: ATTTCTGAACTCCACAGTTCAGCCGCAGAGGGAAAT...AAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGTTTCAGAAGTCTCATTaGGAAGAGATGGAGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMFQKSH*EEMENG Trigger: GCCATTCTCCATCTCTTCTCAATGAGACTTCTGAAA...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR TCA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGATGCCAGGCAAGCACTaGTCTTGCTTGAGCTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WATFVHQIKILILSPDMVMPGKH*SCLSYH Trigger: GTGGTAGCTCAAGCAAGATCAGTGCTTGCCTGGCAT...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCCCTATAACCCCAAAATaGAGCAATATCCAGGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLLYATVLTELYVSYAAPITPK*SNIQGG Trigger: ACCGCCCTGGATATTGCTGCATTTTGGGGTTATAGG...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTAAACGGACTTCCGGCTGCTaGGAGCTTTCTTTATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: CFMPRYLLNCMSHMLPFKRTSGC*ELSLLP Trigger: TGGTAATAAAGAAAGCTCGCAGCAGCCGGAAGTCCG...TTTAAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGAACTTGTATCGACTATaGCAGGCAAGCACTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMNLYRL*QASTDL Trigger: AAGATCAGTGCTTGCCTGGCATAGTCGATACAAGTT...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGTCTGGATGGATGACCTaGATAATTACGACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMSGWMT*IITTGS Trigger: TGATCCAGTCGTAATTATGCAGGTCATCCATCCAGA...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGCTCATTGAGAAGAGATaGAGAATGGCTGAGTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPPNLRKSRGIAPVYETMLIEKR*RMAEYS Trigger: GGAATACTCAGCCATTCTCCATCTCTTCTCAATGAG...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCCAGAAGAGCTGGCATTaGCGGGTGGAGAAAATAACA | + |
|
Preference number: 4 (lower is better) Translates to: IFLLYATVLTELYVSYAAQKSWH*RVEKIT Trigger: TGTTATTTTCTCCACCCGCCAATGCCAGCTCTTCTG...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTAAAATAACAATCATTGCCAACACTGCTCAGATGACACTAGGAGTGACAGAGATGGAGAATGGCTaGGTATTCCTGCTAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVKITIIANTAQMTLGVTEMENG*VFLLTL Trigger: CAAAGTTAGCAGGAATACTCAGCCATTCTCCATCTC...TGTCACTCCTAGTGTCATCTGAGCAGTGTTGGCAATGATTGTTATTTTAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTGAGATGGAGAATGGCTaGGTATTCCTGCTAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLYATVLTELYVSYAAFEMENG*VFLLTL Trigger: CAAAGTTAGCAGGAATACTCAGCCATTCTCCATCTC...AAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCCAGGGGGTTCAAGTCTaGGAAAAGGAGATAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLLYATVLTELYVSYAAQGVQV*EKEINC Trigger: ACAGTTTATCTCCTTTTCTCAGACTTGAACCCCCTG...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTAAAATAACAATCATTGCCAACACTGCTCAGATGACACTAGGAGTGACACAGTGTTTGATTAACTaGTGTGCGATAGCTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVKITIIANTAQMTLGVTQCLIN*CAIARL Trigger: AAGCCGAGCTATCGCACATCAGTTAATCAAACACTG...TGTCACTCCTAGTGTCATCTGAGCAGTGTTGGCAATGATTGTTATTTTAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTGGAATCGCTTTTGCCTaGCTAGAAGACATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFCFMPRYLLNCMSHMLPGIAFA*LEDIWF Trigger: GAACCAAATGTCTTCTAGGCAGGCAAAAGCGATTCC...AGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAAAATAACAATCATTGCCAACACTGCTCAGATGACACTAGGAGTGACAACTCGTCTACTTCATTaGTTAGGAACCAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVKITIIANTAQMTLGVTTRLLH*LGTRAS Trigger: AGAAGCCCTGGTTCCTAACCAATGAAGTAGACGAGT...TGTCACTCCTAGTGTCATCTGAGCAGTGTTGGCAATGATTGTTATTTTAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGTGCGATAGCTCGGCTTaGTGGCACAAAGAATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WATFVHQIKILILSPDMVCDSSA*WHKECL Trigger: CAAGCATTCTTTGTGCCACCAAGCCGAGCTATCGCA...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCCGCTTTATTGACAAGTaGTCTGTCACATCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFLLYATVLTELYVSYAARFIDK*SVTSFL Trigger: GAGAAAGGATGTGACAGATCACTTGTCAATAAAGCG...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTGCCTCGCTTTATTaGCAAGTGATCTGTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: IFLLYATVLTELYVSYAAFASLY*QVICHI Trigger: GATGTGACAGATCACTTGTCAATAAAGCGAGGCAAA...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTGAACATGGCCAACTTTaGCTCCACTTTCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGRGVYLLMNIINKQILAEHGQL*LHFPLP Trigger: TGGAAGAGGAAAGTGGAGTCAAAGTTGGCCATGTTC...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR GCA 90 bp | TTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTAACTTGTATCGACTATaGCAGGCAAGCACTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFCFMPRYLLNCMSHMLPNLYRL*QASTDL Trigger: AAGATCAGTGCTTGCCTGGCATAGTCGATACAAGTT...AGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTTCTGGATGGATGACCTaGATAATTACGACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FCFMPRYLLNCMSHMLPFSGWMT*IITTGS Trigger: TGATCCAGTCGTAATTATGCAGGTCATCCATCCAGA...AAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAAAATAACAATCATTGCCAACACTGCTCAGATGACACTAGGAGTGACAAGAAGAGATGGAGAATaGCTGAGTATTCCTGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVKITIIANTAQMTLGVTRRDGE*LSIPAN Trigger: GTTAGCAGGAATACTCAGCCATTCTCCATCTCTTCT...TGTCACTCCTAGTGTCATCTGAGCAGTGTTGGCAATGATTGTTATTTTAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTAGAAGAGATGGAGAATaGCTGAGTATTCCTGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FFCFMPRYLLNCMSHMLPRRDGE*LSIPAN Trigger: GTTAGCAGGAATACTCAGCCATTCTCCATCTCTTCT...AGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTAAAACTCGTCTACTTCATTaGTTAGGAACCAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFMPRYLLNCMSHMLPFKTRLLH*LGTRAS Trigger: AGAAGCCCTGGTTCCTAACCAATGAAGTAGACGAGT...TTTAAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTTTGGTTCCATCTGGATaGATGACCTGCATAATTACG | + |
|
Preference number: 4 (lower is better) Translates to: FCFMPRYLLNCMSHMLPFLVPSG*MTCIIT Trigger: CGTAATTATGCAGGTCATCCATCCAGATGGAACCAA...AAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTAAACTCATTGAGAAGAGATaGAGAATGGCTGAGTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFMPRYLLNCMSHMLPFKLIEKR*RMAEYS Trigger: GGAATACTCAGCCATTCTCCATCTCTTCTCAATGAG...TTTAAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTACATTTGGTTCCATCTaGATGGATGACCTGCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCFMPRYLLNCMSHMLPFTFGSI*MDDLHN Trigger: ATTATGCAGGTCATCCATCCAGATGGAACCAAATGT...AAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTCGCTTTATTGACAAGTaGTCTGTCACATCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRGVYLLMNIINKQILARFIDK*SVTSFL Trigger: GAGAAAGGATGTGACAGATCACTTGTCAATAAAGCG...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR TCA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTTTTGCCTCGCTTTATTaGCAAGTGATCTGTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: RGRGVYLLMNIINKQILAFASLY*QVICHI Trigger: GATGTGACAGATCACTTGTCAATAAAGCGAGGCAAA...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGTTGGTTCCATCTGGATaGATGACCTGCATAATTACG | + |
|
Preference number: 4 (lower is better) Translates to: WATFVHQIKILILSPDMVLVPSG*MTCIIT Trigger: CGTAATTATGCAGGTCATCCATCCAGATGGAACCAA...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CCA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTACATTTGGTTCCATCTaGATGGATGACCTGCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGRGVYLLMNIINKQILATFGSI*MDDLHN Trigger: ATTATGCAGGTCATCCATCCAGATGGAACCAAATGT...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS TCA 90 bp | CAAACCGTCCTCCTCTTCCTCTGGGACTCCTCCCGCCTGGGCGGGTaGGCCTTTCCTCATCTCAAGCTCGACTCCAAGGAACACCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QTVLLFLWDSSRLGG*AFPHLKLDSKEHQG Trigger: ACCTTGGTGTTCCTTGGAGTCGAGCTTGAGATGAGGAAAGGCTCACCCGCCCAGGCGGGAGGAGTCCCAGAGGAAGAGGAGGACGGTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
||
| CDS TCA 90 bp | GCCACAGGTTGGGCAGAACTTGTATCGACTATGCCAGGCAAGCACTaGTCTTGCTTGAGCTACCACCCCAGCCTCCTTTTCTTTCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: ATGWAELVSTMPGKH*SCLSYHPSLLFFQL Trigger: CAGTTGAAAGAAAAGGAGGCTGGGGTGGTAGCTCAAGCAAGATCAGTGCTTGCCTGGCATAGTCGATACAAGTTCTGCCCAACCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
||
| CDS-3UTR CAA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCAAGGCAAGCACTGATCTaGCTTGAGCTACCACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CTSIILVMCLCQRRLQRPRQALI*LELPPQ Trigger: CTGGGGTGGTAGCTCAAGCAAGATCAGTGCTTGCCT...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS TCA 90 bp | GTGAGCCTTTCCTCATCTCAAGCTCGACTCCAAGGAACACCAAGGTaGTCTTCTCAGGCTGAGCCAAGTAACCCTTTACATCCGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLSSSQARLQGTPR*SSQAEPSNPLHPGS Trigger: ACTACCCGGATGTAAAGGGTTACTTGGCTCAGCCTGAGAAGATCACCTTGGTGTTCCTTGGAGTCGAGCTTGAGATGAGGAAAGGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
||
| CDS-3UTR CAA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCAGCAGAAGAGCTGGCATaGGCGGGTGGAGAAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: CTSIILVMCLCQRRLQRPAEELA*AGGENN Trigger: GTTATTTTCTCCACCCGCCAATGCCAGCTCTTCTGC...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CAA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCACAGGTTGGGCAGAACTaGTATCGACTATGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTSIILVMCLCQRRLQRPQVGQN*YRLCQA Trigger: TGCCTGGCATAGTCGATACAAGTTCTGCCCAACCTG...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CAA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCAGCTTGCTGCTTCCCTTaGGTAAGAACGTCCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: CTSIILVMCLCQRRLQRPACCFP*VRTSTT Trigger: GGTTGTGGACGTTCTTACCAAAGGGAAGCAGCAAGC...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CAA 90 bp | TGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGCCACACTCGTCTACTTCATaGGTTAGGAACCAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTSIILVMCLCQRRLQRPHSSTS*VRNQGF Trigger: GAAGCCCTGGTTCCTAACCAATGAAGTAGACGAGTG...TGGCCTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS-3UTR CAA 90 bp | GGTGTGTACCTCGATCATTCTAGTTATGTGTCTGTGTCAGAGACGCCTGCAGAGGTGGCTCTCTTTAGCTaGCAGCCAGTCAGAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: GVYLDHSSYVSVSETPAEVALFS*QPVRII Trigger: AATAATTCTGACTGGCTGCAAGCTAAAGAGAGCCAC...CTCTGCAGGCGTCTCTGACACAGACACATAACTAGAATGATCGAGGTACACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
||
| CDS CCA 90 bp | GCAGTCCATCCATTTTCAGAAGTCTCATTGAGAAGAGATGGAGAATaGCTGAGTATTCCTGCTAACTTTGCGACATTTCCCTCTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVHPFSEVSLRRDGE*LSIPANFATFPSAA Trigger: AGCCGCAGAGGGAAATGTCGCAAAGTTAGCAGGAATACTCAGCCATTCTCCATCTCTTCTCAATGAGACTTCTGAAAATGGATGGACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
||
| CDS CCA 90 bp | AAGACATTTGGTTCCATCTGGATGGATGACCTGCATAATTACGACTaGATCAACTCTCGGGTAAGATGTGTTGTGGACGCCTTGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: KTFGSIWMDDLHNYD*INSRVRCVVDALET Trigger: AGTCTCCAAGGCGTCCACAACACATCTTACCCGAGAGTTGATCCAGTCGTAATTATGCAGGTCATCCATCCAGATGGAACCAAATGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTAGGCAAGCACTGATCTaGCTTGAGCTACCACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FCFMPRYLLNCMSHMLPFRQALI*LELPPQ Trigger: CTGGGGTGGTAGCTCAAGCAAGATCAGTGCTTGCCT...AAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTCGCACTGCCACAGGTaGGGCAGAACTTGTATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: IFLLYATVLTELYVSYAASHCHR*GRTCID Trigger: GTCGATACAAGTTCTGCCCAACCTGTGGCAGTGCGA...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CAA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGGGGCATTGGCCATGGTaGACAAGAGACATACTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QPPNLRKSRGIAPVYETMGHWPW*TRDILN Trigger: GTTCAGTATGTCTCTTGTCAACCATGGCCAATGCCC...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CAA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCGCAGAAGAGCTGGCATaGGCGGGTGGAGAAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFLLYATVLTELYVSYAAAEELA*AGGENN Trigger: GTTATTTTCTCCACCCGCCAATGCCAGCTCTTCTGC...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTCAGGTTGGGCAGAACTaGTATCGACTATGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FCFMPRYLLNCMSHMLPFQVGQN*YRLCQA Trigger: TGCCTGGCATAGTCGATACAAGTTCTGCCCAACCTG...AAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CAA 90 bp | CAGCCTCCAAATTTACGAAAATCTCGAGGCATCGCTCCAGTTTATGAAACTATGTGGCACAAAGAATGCTaGCTGCTTCCCTTTGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPPNLRKSRGIAPVYETMWHKEC*LLPFGK Trigger: CTTACCAAAGGGAAGCAGCAAGCATTCTTTGTGCCA...CATAGTTTCATAAACTGGAGCGATGCCTCGAGATTTTCGTAAATTTGGAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CAA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTTCGCACTGCCACAGGTaGGGCAGAACTTGTATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RGRGVYLLMNIINKQILASHCHR*GRTCID Trigger: GTCGATACAAGTTCTGCCCAACCTGTGGCAGTGCGA...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CAA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCCTGCCTAGAAGACATTaGGTTCCATCTGGATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: IFLLYATVLTELYVSYAALPRRH*VPSGWM Trigger: CATCCATCCAGATGGAACCAAATGTCTTCTAGGCAG...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS CCA 90 bp | AGTATTCCTGCTAACTTTGCGACATTTCCCTCTGCGGCTGAACTGTaGAGTTCAGAAATCATCTCCTTTTTGGGATTTCTTTTAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIPANFATFPSAAEL*SSEIISFLGFLLTE Trigger: TTCTGTTAAAAGAAATCCCAAAAAGGAGATGATTTCTGAACTCCACAGTTCAGCCGCAGAGGGAAATGTCGCAAAGTTAGCAGGAATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS-3UTR CAA 90 bp | TTATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCACTCGTCTACTTCATaGGTTAGGAACCAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFFCFMPRYLLNCMSHMLHSSTS*VRNQGF Trigger: GAAGCCCTGGTTCCTAACCAATGAAGTAGACGAGTG...CAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CAA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTTTAACGAGGAGGGCATaGGCCATGGTTGACAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGRGVYLLMNIINKQILALTRRA*AMVDKR Trigger: TCTCTTGTCAACCATGGCCAATGCCCTCCTCGTTAA...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CAA 90 bp | ATTTTTCTGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCGTTTGCCTCGCTTTATaGACAAGTGATCTGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: IFLLYATVLTELYVSYAAVCLAL*TSDLSH Trigger: ATGTGACAGATCACTTGTCAATAAAGCGAGGCAAAC...GGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCAGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CAA 90 bp | TGCTTTATGCCACGGTACTTACTGAATTGTATGTCTCATATGCTGCCTTTTAAAGTGGCTCTCTTTAGCTaGCAGCCAGTCAGAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: CFMPRYLLNCMSHMLPFKVALFS*QPVRII Trigger: AATAATTCTGACTGGCTGCAAGCTAAAGAGAGCCAC...TTTAAAAGGCAGCATATGAGACATACAATTCAGTAAGTACCGTGGCATAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174122.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGCTGCCTAGAAGACATTaGGTTCCATCTGGATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WATFVHQIKILILSPDMVLPRRH*VPSGWM Trigger: CATCCATCCAGATGGAACCAAATGTCTTCTAGGCAG...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CAA 90 bp | TGGGCTACATTTGTGCACCAAATCAAAATTTTAATTCTTTCACCAGATATGGTGGTTTGCCTCGCTTTATaGACAAGTGATCTGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: WATFVHQIKILILSPDMVVCLAL*TSDLSH Trigger: ATGTGACAGATCACTTGTCAATAAAGCGAGGCAAAC...CACCATATCTGGTGAAAGAATTAAAATTTTGATTTGGTGCACAAATGTAGCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS-3UTR CAA 90 bp | AGAGGTAGAGGTGTATATTTGCTTATGAACATCATTAATAAGCAGATACTGGCTTCAGAATTATTTCTTTaGTCACTCCTCCGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGRGVYLLMNIINKQILASELFL*SLLRSS Trigger: ACTGGACCGGAGGAGTGACAAAAGAAATAATTCTGA...AGCCAGTATCTGCTTATTAATGATGTTCATAAGCAAATATACACCTCTACCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS TCA 72 bp | CTCCTCTTCCTCTGGGACTCCTCCCGCCTGGGCGGGTaGGCCTTTCCTCATCTCAAGCTCGACTCCAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLFLWDSSRLGG*AFPHLKLDSKE Trigger: TTCCTTGGAGTCGAGCTTGAGATGAGGAAAGGCTCACCCGCCCAGGCGGGAGGAGTCCCAGAGGAAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CCA 72 bp | AAACCGTCCTCCTCTTCCTCTGGGACTCCTCCCGCCTaGGCGGGTGAGCCTTTCCTCATCTCAAGCTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: KPSSSSSGTPPA*AGEPFLISSST Trigger: AGTCGAGCTTGAGATGAGGAAAGGCTCACCCGCCCAGGCGGGAGGAGTCCCAGAGGAAGAGGAGGACGGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS TCA 72 bp | TGGGCAGAACTTGTATCGACTATGCCAGGCAAGCACTaGTCTTGCTTGAGCTACCACCCCAGCCTCCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WAELVSTMPGKH*SCLSYHPSLLF Trigger: GAAAAGGAGGCTGGGGTGGTAGCTCAAGCAAGATCAGTGCTTGCCTGGCATAGTCGATACAAGTTCTGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CCA 72 bp | CAAGCAGAAACTGGACCACATCGGGATGCCCGTTCCTaGCGGCGTACATTAAAGCAGTCCATCCATTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QAETGPHRDARS*RRTLKQSIHFQ Trigger: CTGAAAATGGATGGACTGCTTTAATGTACGCCGCCAGGAACGGGCATCCCGATGTGGTCCAGTTTCTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CCA 72 bp | GCCTCCTTCCTCAATTTTAGTCGCACTGCCACAGGTTaGGCAGAACTTGTATCGACTATGCCAGGCAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ASFLNFSRTATG*AELVSTMPGKH Trigger: GTGCTTGCCTGGCATAGTCGATACAAGTTCTGCCCAACCTGTGGCAGTGCGACTAAAATTGAGGAAGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS GCA 72 bp | GCGATAGCTCGGCTTGGTGGCACAAAGAATGCTTGCTaGTTCCCTTTGGTAAGAACGTCCACAACCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AIARLGGTKNAC*FPLVRTSTTCS Trigger: AGAACAGGTTGTGGACGTTCTTACCAAAGGGAAGCAGCAAGCATTCTTTGTGCCACCAAGCCGAGCTATCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS GCA 72 bp | TGTGCGATAGCTCGGCTTGGTGGCACAAAGAATGCTTaGTGCTTCCCTTTGGTAAGAACGTCCACAACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CAIARLGGTKNA*CFPLVRTSTTC Trigger: ACAGGTTGTGGACGTTCTTACCAAAGGGAAGCAGCAAGCATTCTTTGTGCCACCAAGCCGAGCTATCGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS CAA 72 bp | ATGTGCGATAGCTCGGCTTGGTGGCACAAAGAATGCTaGCTGCTTCCCTTTGGTAAGAACGTCCACAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: MCDSSAWWHKEC*LLPFGKNVHNL Trigger: CAGGTTGTGGACGTTCTTACCAAAGGGAAGCAGCAAGCATTCTTTGTGCCACCAAGCCGAGCTATCGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS CAA 90 bp | AGGTTGGGCAGAACTTGTATCGACTATGCCAGGCAAGCACTGATCTaGCTTGAGCTACCACCCCAGCCTCCTTTTCTTTCAACTGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLGRTCIDYARQALI*LELPPQPPFLSTAE Trigger: TTCTGCAGTTGAAAGAAAAGGAGGCTGGGGTGGTAGCTCAAGCAAGATCAGTGCTTGCCTGGCATAGTCGATACAAGTTCTGCCCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS TCA 72 bp | TTGTATCGACTATGCCAGGCAAGCACTGATCTTGCTTaGGCTACCACCCCAGCCTCCTTTTCTTTCAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LYRLCQASTDLA*ATTPASFSFNC Trigger: GCAGTTGAAAGAAAAGGAGGCTGGGGTGGTAGCTCAAGCAAGATCAGTGCTTGCCTGGCATAGTCGATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CCA 72 bp | GGTTCCATCTGGATGGATGACCTGCATAATTACGACTaGATCAACTCTCGGGTAAGATGTGTTGTGGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSIWMDDLHNYD*INSRVRCVVDA Trigger: GGCGTCCACAACACATCTTACCCGAGAGTTGATCCAGTCGTAATTATGCAGGTCATCCATCCAGATGGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CAA 72 bp | CGGCTTGGTGGCACAAAGAATGCTTGCTGCTTCCCTTaGGTAAGAACGTCCACAACCTGTTCTCTAGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RLGGTKNACCFP*VRTSTTCSLVN Trigger: GTTCACTAGAGAACAGGTTGTGGACGTTCTTACCAAAGGGAAGCAGCAAGCATTCTTTGTGCCACCAAGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS TCA 72 bp | TCCTCATCTCAAGCTCGACTCCAAGGAACACCAAGGTaGTCTTCTCAGGCTGAGCCAAGTAACCCTTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSQARLQGTPR*SSQAEPSNPLH Trigger: ATGTAAAGGGTTACTTGGCTCAGCCTGAGAAGATCACCTTGGTGTTCCTTGGAGTCGAGCTTGAGATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CAA 72 bp | AGAACTTGTATCGACTATGCCAGGCAAGCACTGATCTaGCTTGAGCTACCACCCCAGCCTCCTTTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RTCIDYARQALI*LELPPQPPFLS Trigger: TGAAAGAAAAGGAGGCTGGGGTGGTAGCTCAAGCAAGATCAGTGCTTGCCTGGCATAGTCGATACAAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CAA 72 bp | TCAATTTTAGTCGCACTGCCACAGGTTGGGCAGAACTaGTATCGACTATGCCAGGCAAGCACTGATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SILVALPQVGQN*YRLCQASTDLA Trigger: AGCAAGATCAGTGCTTGCCTGGCATAGTCGATACAAGTTCTGCCCAACCTGTGGCAGTGCGACTAAAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CAA 72 bp | CCACAGCTAAACAGCCAATCATTAACGAGGAGGGCATaGGCCATGGTTGACAAGAGACATACTGAACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQLNSQSLTRRA*AMVDKRHTEHG Trigger: GCCATGTTCAGTATGTCTCTTGTCAACCATGGCCAATGCCCTCCTCGTTAATGATTGGCTGTTTAGCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS TCA 72 bp | AGATTGGGGTTCATTCCCACCCAGTGTTTGATTAACTaGTGTGCGATAGCTCGGCTTGGTGGCACAAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RLGFIPTQCLIN*CAIARLGGTKN Trigger: ATTCTTTGTGCCACCAAGCCGAGCTATCGCACATCAGTTAATCAAACACTGGGTGGGAATGAACCCCAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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| CDS TCA 72 bp | AATATCCAGGGCGGTTTGCCTCGCTTTATTGACAAGTaGTCTGTCACATCCTTTCTCAAGCAGAAACTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: NIQGGLPRFIDK*SVTSFLKQKLD Trigger: GTCCAGTTTCTGCTTGAGAAAGGATGTGACAGATCACTTGTCAATAAAGCGAGGCAAACCGCCCTGGATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS TCA 72 bp | ATGCAGCAATATCCAGGGCGGTTTGCCTCGCTTTATTaGCAAGTGATCTGTCACATCCTTTCTCAAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MQQYPGRFASLY*QVICHILSQAE Trigger: TTCTGCTTGAGAAAGGATGTGACAGATCACTTGTCAATAAAGCGAGGCAAACCGCCCTGGATATTGCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CAA 72 bp | AATGCAGCAATATCCAGGGCGGTTTGCCTCGCTTTATaGACAAGTGATCTGTCACATCCTTTCTCAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NAAISRAVCLAL*TSDLSHPFSSR Trigger: TCTGCTTGAGAAAGGATGTGACAGATCACTTGTCAATAAAGCGAGGCAAACCGCCCTGGATATTGCTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CCA 72 bp | GCTAACTTTGCGACATTTCCCTCTGCGGCTGAACTGTaGAGTTCAGAAATCATCTCCTTTTTGGGATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ANFATFPSAAEL*SSEIISFLGFL Trigger: AAGAAATCCCAAAAAGGAGATGATTTCTGAACTCCACAGTTCAGCCGCAGAGGGAAATGTCGCAAAGTTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CAA 72 bp | CTCTCTTTAGCTTGCAGCCAGTCAGAATTATTTCTTTaGTCACTCCTCCGGTCCAGTAGTGTTCTGCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSLACSQSELFL*SLLRSSSVLLK Trigger: TTTTAGCAGAACACTACTGGACCGGAGGAGTGACAAAAGAAATAATTCTGACTGGCTGCAAGCTAAAGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025065.12 ENSMUST00000174122.2 |
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| CDS CAA 90 bp | ACAACCTGTTCTCTAGTGAACCATCGGGCATCCTCTATTTCATTCTaGTCAACTTTAATTTCTGTAGACACTGCCACAGCTAAACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TTCSLVNHRASSISF*STLISVDTATAKQP Trigger: TGGCTGTTTAGCTGTGGCAGTGTCTACAGAAATTAAAGTTGACAAGAATGAAATAGAGGATGCCCGATGGTTCACTAGAGAACAGGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025065.12 |
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