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Pregenerated sensors for NUDT10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073293

Ensembl transcript IDs: ENSMUST00000103006.4

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTCAACCCACAGGTTCAGCCTCCACCTTTTCCTTTCATCCTTGTaGCTAATATACCGAAGAAACTGGATCATCTGTCCTGTGTTTTCT +
Preference number: 1 (lower is better)
Translates to: FSTHRFSLHLFLSSL*LIYRRNWIICPVFS
Trigger: AGAAAACACAGGACAGATGATCCAGTTTCTTCGGTATATTAGTCACAAGGATGAAAGGAAAAGGTGGAGGCTGAACCTGTGGGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR TCA 90 bp GTGCCAAATAGAATTCTGTACAGATACAGTGGTAGTGCAACAACCTaGAGAGTAGCCATTGTTAATACCAGGAAAGAAGTGTCCAAAAGC +
Preference number: 1 (lower is better)
Translates to: VPNRILYRYSGSATT*RVAIVNTRKEVSKS
Trigger: GCTTTTGGACACTTCTTTCCTGGTATTAACAATGGCTACTCTTCAGGTTGTTGCACTACCACTGTATCTGTACAGAATTCTATTTGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR TCA 90 bp ATAAAAAGACTAAGAAAGCACGCTCTTTGCATTCACGGTCAAATCTaGTGGGAAATACAAACAAAAGCACACAAAGGCCACAGGTGCCAA +
Preference number: 1 (lower is better)
Translates to: IKRLRKHALCIHGQI*WEIQTKAHKGHRCQ
Trigger: TTGGCACCTGTGGCCTTTGTGTGCTTTTGTTTGTATTTCCCATCAGATTTGACCGTGAATGCAAAGAGCGTGCTTTCTTAGTCTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR-3UTR TCA 90 bp GGTCAAAATTTTGGCAAATGTAGGAGATACATAATGTCTGGGATAACACAGACAGGTAGTGCAACAACCTaGAGAGTAGCCATTGTTAAT +
Preference number: 2 (lower is better)
Translates to: GQNFGKCRRYIMSGITQTGSATT*RVAIVN
Trigger: ATTAACAATGGCTACTCTTCAGGTTGTTGCACTACC...TGTCTGTGTTATCCCAGACATTATGTATCTCCTACATTTGCCAAAATTTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR-3UTR GCA 90 bp GGTCAAAATTTTGGCAAATGTAGGAGATACATAATGTCTGGGATAACACAGACACTCCTATCTCACAGCTaGCTTGAAATACAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: GQNFGKCRRYIMSGITQTLLSHS*LEIQKP
Trigger: TGGCTTTTGTATTTCAAGGCAGCTGTGAGATAGGAG...TGTCTGTGTTATCCCAGACATTATGTATCTCCTACATTTGCCAAAATTTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR-3UTR TCA 90 bp GGTCAAAATTTTGGCAAATGTAGGAGATACATAATGTCTGGGATAACACAGACAATCTCACAGCTGCCTTaGAATACAAAAGCCACATAT +
Preference number: 2 (lower is better)
Translates to: GQNFGKCRRYIMSGITQTISQLP*NTKATY
Trigger: ATATGTGGCTTTTGTATTTCAAGGCAGCTGTGAGAT...TGTCTGTGTTATCCCAGACATTATGTATCTCCTACATTTGCCAAAATTTTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR CAA 90 bp CAAGTAATGTATGCTAGATATAAAAAGACTAAGAAAGCACGCTCTTaGCATTCACGGTCAAATCTGATGGGAAATACAAACAAAAGCACA +
Preference number: 2 (lower is better)
Translates to: QVMYARYKKTKKARS*HSRSNLMGNTNKST
Trigger: TGTGCTTTTGTTTGTATTTCCCATCAGATTTGACCGTGAATGCAAAGAGCGTGCTTTCTTAGTCTTTTTATATCTAGCATACATTACTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR TCA 72 bp CACAGGTTCAGCCTCCACCTTTTCCTTTCATCCTTGTaGCTAATATACCGAAGAAACTGGATCATCTGTCCT +
Preference number: 3 (lower is better)
Translates to: HRFSLHLFLSSL*LIYRRNWIICP
Trigger: AGGACAGATGATCCAGTTTCTTCGGTATATTAGTCACAAGGATGAAAGGAAAAGGTGGAGGCTGAACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR TCA 72 bp CTAAGAAAGCACGCTCTTTGCATTCACGGTCAAATCTaGTGGGAAATACAAACAAAAGCACACAAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: LRKHALCIHGQI*WEIQTKAHKGH
Trigger: GTGGCCTTTGTGTGCTTTTGTTTGTATTTCCCATCAGATTTGACCGTGAATGCAAAGAGCGTGCTTTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR GCA 72 bp TGGGAAATACAAACAAAAGCACACAAAGGCCACAGGTaGCAAATAGAATTCTGTACAGATACAGTGGTAGTG +
Preference number: 3 (lower is better)
Translates to: WEIQTKAHKGHR*QIEFCTDTVVV
Trigger: CACTACCACTGTATCTGTACAGAATTCTATTTGGCACCTGTGGCCTTTGTGTGCTTTTGTTTGTATTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR TCA 72 bp AGAATTCTGTACAGATACAGTGGTAGTGCAACAACCTaGAGAGTAGCCATTGTTAATACCAGGAAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: RILYRYSGSATT*RVAIVNTRKEV
Trigger: CACTTCTTTCCTGGTATTAACAATGGCTACTCTTCAGGTTGTTGCACTACCACTGTATCTGTACAGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR TCA 72 bp ATGAACAACATTTTTGCTCCTATCTCACAGCTGCCTTaGAATACAAAAGCCACATATATGCTAGAGATATTA +
Preference number: 3 (lower is better)
Translates to: MNNIFAPISQLP*NTKATYMLEIL
Trigger: TAATATCTCTAGCATATATGTGGCTTTTGTATTTCAAGGCAGCTGTGAGATAGGAGCAAAAATGTTGTTCAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
CDS-3UTR GCA 90 bp AATCTGATGGGAAATACAAACAAAAGCACACAAAGGCCACAGGTGCCAAATAGACGTAGGTCCGGTGCTTaGGGTCCTGGTTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: NLMGNTNKSTQRPQVPNRRRSGA*GPGSAR
Trigger: TCGAGCAGAACCAGGACCGCAAGCACCGGACCTACG...TCTATTTGGCACCTGTGGCCTTTGTGTGCTTTTGTTTGTATTTCCCATCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4
3UTR CAA 72 bp TATGCTAGATATAAAAAGACTAAGAAAGCACGCTCTTaGCATTCACGGTCAAATCTGATGGGAAATACAAAC +
Preference number: 4 (lower is better)
Translates to: YARYKKTKKARS*HSRSNLMGNTN
Trigger: GTTTGTATTTCCCATCAGATTTGACCGTGAATGCAAAGAGCGTGCTTTCTTAGTCTTTTTATATCTAGCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103006.4