Pregenerated sensors for NUDCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038736Ensembl transcript IDs: ENSMUST00000038719.8, ENSMUST00000226606.2, ENSMUST00000227843.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCCTGTTGTACAGCACAGTGGACATGGGGGTGGGCTGCCGATAGATaGATACTCGGCGAAGGCACTCACAAAGGGCTGCATACGAGTAGT | + |
Preference number: 1 (lower is better) Translates to: SCCTAQWTWGWAADR*ILGEGTHKGLHTSS Trigger: ACTACTCGTATGCAGCCCTTTGTGAGTGCCTTCGCCGAGTATTCATCTATCGGCAGCCCACCCCCATGTCCACTGTGCTGTACAACAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 90 bp | TTGGTTTCTAGGCTTGCTACCTGCTGCTTAGCAACTTGCCCCACATaGCTGCCTTCCTTCCTGTTGTACAGCACAGTGGACATGGGGGTG | + |
Preference number: 1 (lower is better) Translates to: LVSRLATCCLATCPT*LPSFLLYSTVDMGV Trigger: CACCCCCATGTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCAGGTAGCAAGCCTAGAAACCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CCA 90 bp | TGCTCATTCTGTGCCTTCTCTGATGAGATGGGGTCTCTCAGATCCTaGAGCTCACGGGTTCGGATCAACTGTGTGGACGGCAATGATGCT | + |
Preference number: 1 (lower is better) Translates to: CSFCAFSDEMGSLRS*SSRVRINCVDGNDA Trigger: AGCATCATTGCCGTCCACACAGTTGATCCGAACCCGTGAGCTCCAGGATCTGAGAGACCCCATCTCATCAGAGAAGGCACAGAATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR GCA 90 bp | ATAGGATCATTGGTTTCTAGGCTTGCTACCTGCTGCTTAGCAACTTaGCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTGGAC | + |
Preference number: 1 (lower is better) Translates to: IGSLVSRLATCCLAT*PTCLPSFLLYSTVD Trigger: GTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCAGGTAGCAAGCCTAGAAACCAATGATCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 90 bp | CGAAAGGACCCAGATGTAGCTGTCTCTTGCAAACACAGAAGTGGATaGTCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAG | + |
Preference number: 1 (lower is better) Translates to: RKDPDVAVSCKHRSG*SQSANGWITGLPME Trigger: CTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCAAGAGACAGCTACATCTGGGTCCTTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CCA 90 bp | TCCTGCTTGCTGCAGTGTGGTTGCCAGAGGAGAGCATCGACATCATaGCGTAGACAGAAGCACGGCATTTCTTTAGGATCCACAATGACT | + |
Preference number: 1 (lower is better) Translates to: SCLLQCGCQRRASTS*RRQKHGISLGSTMT Trigger: AGTCATTGTGGATCCTAAAGAAATGCCGTGCTTCTGTCTACGCCATGATGTCGATGCTCTCCTCTGGCAACCACACTGCAGCAAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CCA 90 bp | ATTGACATCAAGTGCTTTGCTCATTCTGTGCCTTCTCTGATGAGATaGGGTCTCTCAGATCCTGGAGCTCACGGGTTCGGATCAACTGTG | + |
Preference number: 1 (lower is better) Translates to: IDIKCFAHSVPSLMR*GLSDPGAHGFGSTV Trigger: CACAGTTGATCCGAACCCGTGAGCTCCAGGATCTGAGAGACCCCATCTCATCAGAGAAGGCACAGAATGAGCAAAGCACTTGATGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CCA 90 bp | ATGTTTAAACAGGCAGAGTTTATTACAAGACAAACAGGGCCTCTCTaGAGGATAAGAAGAGCAAGGGCCAAAGCACTGGGAGGGCTGGGG | + |
Preference number: 1 (lower is better) Translates to: MFKQAEFITRQTGPL*RIRRARAKALGGLG Trigger: CCCCAGCCCTCCCAGTGCTTTGGCCCTTGCTCTTCTTATCCTCCAGAGAGGCCCTGTTTGTCTTGTAATAAACTCTGCCTGTTTAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CCA 90 bp | GTGTGGACACTATGCCCCTCCTTAGAAGTGGGAACAAAACAACCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGAT | + |
Preference number: 1 (lower is better) Translates to: VWTLCPSLEVGTKQP*KELQRQSLELRRKD Trigger: ATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGTTGTTTTGTTCCCACTTCTAAGGAGGGGCATAGTGTCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR TCA 90 bp | GAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACT | + |
Preference number: 1 (lower is better) Translates to: EIPSQMDGPGGHHPE*GNTFTKELTQYVLT Trigger: AGTGAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR TCA 90 bp | AAGAGGTTTTTGGTAGTGAGAACAAATAATCTCTCATTTGTTGCCTaGAAGCCTAAAATAGGATCATTGGTTTCTAGGCTTGCTACCTGC | + |
Preference number: 1 (lower is better) Translates to: KRFLVVRTNNLSFVA*KPKIGSLVSRLATC Trigger: GCAGGTAGCAAGCCTAGAAACCAATGATCCTATTTTAGGCTTTCAGGCAACAAATGAGAGATTATTTGTTCTCACTACCAAAAACCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CAA 90 bp | CCTAGGGCATTGAAGGTGGCAATGTGCTCCCACATGTCGTCCTGCTaGCTGCAGTGTGGTTGCCAGAGGAGAGCATCGACATCATGGCGT | + |
Preference number: 2 (lower is better) Translates to: PRALKVAMCSHMSSC*LQCGCQRRASTSWR Trigger: ACGCCATGATGTCGATGCTCTCCTCTGGCAACCACACTGCAGCAAGCAGGACGACATGTGGGAGCACATTGCCACCTTCAATGCCCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR GCA 90 bp | TGCCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTGGACATGGGGGTGTTGCTGCAGTGTGGTTaGCAGAGGAGAGCATCGACA | + |
Preference number: 2 (lower is better) Translates to: CPTCLPSFLLYSTVDMGVLLQCG*QRRAST Trigger: TGTCGATGCTCTCCTCTGGCAACCACACTGCAGCAA...CACCCCCATGTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR GCA 90 bp | TTAGCAACTTGCCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTGGACTGTCGTCCTGCTTGCTaGAGTGTGGTTGCCAGAGGA | + |
Preference number: 2 (lower is better) Translates to: LATCPTCLPSFLLYSTVDCRPAC*SVVARG Trigger: TCCTCTGGCAACCACACTGCAGCAAGCAGGACGACA...GTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CAA 90 bp | GAGGATAAGAAGAGCAAGGGCCAAAGCACTGGGAGGGCTGGGGTGTaGAAGGTGACAATGTGCAAGTGGGCAATGGTCTCTGTAGACTAC | + |
Preference number: 2 (lower is better) Translates to: EDKKSKGQSTGRAGV*KVTMCKWAMVSVDY Trigger: GTAGTCTACAGAGACCATTGCCCACTTGCACATTGTCACCTTCAACACCCCAGCCCTCCCAGTGCTTTGGCCCTTGCTCTTCTTATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR TCA 90 bp | GAAGGTGGCAATGTGCTCCCACATGTCGTCCTGCTTGCTGCAGTGTGGTTGCCAAGGATCCACAATGACTaGGAACAGGTACTGGTTGCT | + |
Preference number: 2 (lower is better) Translates to: EGGNVLPHVVLLAAVWLPRIHND*EQVLVA Trigger: AGCAACCAGTACCTGTTCTCAGTCATTGTGGATCCT...TGGCAACCACACTGCAGCAAGCAGGACGACATGTGGGAGCACATTGCCACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR TCA 90 bp | ATACTCGGCGAAGGCACTCACAAAGGGCTGCATACGAGTAGTTTGGAGCACATGCGTAACCTAGGGCATTaGAGGTGGCAATGTGCTCCC | + |
Preference number: 2 (lower is better) Translates to: ILGEGTHKGLHTSSLEHMRNLGH*RWQCAP Trigger: GGGAGCACATTGCCACCTTCAATGCCCTAGGTTACG...CATGTGCTCCAAACTACTCGTATGCAGCCCTTTGTGAGTGCCTTCGCCGAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR GCA 90 bp | CCTAGGGCATTGAAGGTGGCAATGTGCTCCCACATGTCGTCCTGCTTGCTGCAGACAGGTACTGGTTGCTaGCAAGATTCACCACATGAG | + |
Preference number: 2 (lower is better) Translates to: PRALKVAMCSHMSSCLLQTGTGC*QDSPHE Trigger: CTCATGTGGTGAATCTTGGCAGCAACCAGTACCTGT...CTGCAGCAAGCAGGACGACATGTGGGAGCACATTGCCACCTTCAATGCCCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR GCA 90 bp | CTGCTTAGCAACTTGCCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTACATGTCGTCCTGCTTaGTGCAGTGTGGTTGCCAGA | + |
Preference number: 2 (lower is better) Translates to: LLSNLPHMPAFLPVVQHSTCRPA*CSVVAR Trigger: TCTGGCAACCACACTGCAGCAAGCAGGACGACATGT...ACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR CCA 90 bp | CTGCTTAGCAACTTGCCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTACTGAGAACAGGTACTaGTTGCTGCCAAGATTCACC | + |
Preference number: 2 (lower is better) Translates to: LLSNLPHMPAFLPVVQHSTENRY*LLPRFT Trigger: GGTGAATCTTGGCAGCAACCAGTACCTGTTCTCAGT...ACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR TCA 90 bp | CACAGTGGACATGGGGGTGGGCTGCCGATAGATGAATACTCGGCGAAGGCACTCCATTCTTCTAATTCTTaGGCATTACATGCAGGCTTT | + |
Preference number: 2 (lower is better) Translates to: HSGHGGGLPIDEYSAKALHSSNS*ALHAGF Trigger: AAAGCCTGCATGTAATGCTCAAGAATTAGAAGAATG...GAGTGCCTTCGCCGAGTATTCATCTATCGGCAGCCCACCCCCATGTCCACTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR GCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCGAAGTGTGGACACTATaGCCCTCCTTAGAAGTGGGA | + |
Preference number: 2 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIEVWTL*PSLEVG Trigger: TCCCACTTCTAAGGAGGGGCATAGTGTCCACACTTC...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR CCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCCCTTCTCTGATGAGATaGGGTCTCTCAGATCCTGGA | + |
Preference number: 2 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIPSLMR*GLSDPG Trigger: TCCAGGATCTGAGAGACCCCATCTCATCAGAGAAGG...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR CCA 90 bp | CCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAATTGAAGGAAGTTTaGAGAGGAAGTCTGAACCAC | + |
Preference number: 2 (lower is better) Translates to: PLDTQTLYAPVQGNARAKKLKEV*RGSLNH Trigger: GTGGTTCAGACTTCCTCTCCAAACTTCCTTCAATTT...TTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR GCA 90 bp | CTGCTTAGCAACTTGCCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTTATTGCCATCAAATCTaGATAAACTGGAGCTCTCTT | + |
Preference number: 2 (lower is better) Translates to: LLSNLPHMPAFLPVVQHSYCHQI*INWSSL Trigger: AAGAGAGCTCCAGTTTATGCAGATTTGATGGCAATA...ACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR TCA 90 bp | TGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTTATGAAATTCCTAGCAGCGACCATGCTCAGTaGGCTACACTGGTAGCTAAC | + |
Preference number: 2 (lower is better) Translates to: WRLCFSLETLTGIYEIPSSDHAQ*ATLVAN Trigger: GTTAGCTACCAGTGTAGCTCACTGAGCATGGTCGCT...GCTAGGAATTTCATAAATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR CCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCCCCTCCAGGTACCACTaGATACTTTTTAGACAAATG | + |
Preference number: 2 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIPSRYH*ILFRQM Trigger: CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGG...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR CCA 90 bp | ATTACAAGACAAACAGGGCCTCTCTGGAGGATAAGAAGAGCAAGGGCCAAAGCAGTCCTTATGCTTATGTaGCAAACACTTTACCAACAG | + |
Preference number: 2 (lower is better) Translates to: ITRQTGPLWRIRRARAKAVLMLM*QTLYQQ Trigger: CTGTTGGTAAAGTGTTTGCCACATAAGCATAAGGAC...TGCTTTGGCCCTTGCTCTTCTTATCCTCCAGAGAGGCCCTGTTTGTCTTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR TCA 90 bp | GAAGGGAAGAGGTTGTGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTGAAACTCAAGAAAAATaGAGACTGAAGTGTGGACAC | + |
Preference number: 2 (lower is better) Translates to: EGKRLWRLCFSLETLTGIETQEK*RLKCGH Trigger: GTGTCCACACTTCAGTCTTCATTTTTCTTGAGTTTC...AATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR GCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATGTGCATGTTTGTATaGATGCATATGAGGACCAAA | + |
Preference number: 2 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIMCMFV*MHMRTK Trigger: TTTGGTCCTCATATGCATGCATACAAACATGCACAT...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR TCA 90 bp | ATATTTAATGTGGGTGACAGGGATCTAAACTCTGGTCCTTATGCTTATGTGGCAAAAATCTATTCTGTGTaGCTGTCCCAACAAGGGCTC | + |
Preference number: 2 (lower is better) Translates to: IFNVGDRDLNSGPYAYVAKIYSV*LSQQGL Trigger: GAGCCCTTGTTGGGACAGTCACACAGAATAGATTTT...TGCCACATAAGCATAAGGACCAGAGTTTAGATCCCTGTCACCCACATTAAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR GCA 90 bp | GAAGGGAAGAGGTTGTGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTAATATTGACATCAAGTaGTTTGCTCATTCTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: EGKRLWRLCFSLETLTGINIDIK*FAHSVP Trigger: AGGCACAGAATGAGCAAAGCACTTGATGTCAATATT...AATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR GCA 90 bp | GAAGGGAAGAGGTTGTGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTGTTTATGAGACTATGTaGATGTTTGTATGCATGCAT | + |
Preference number: 2 (lower is better) Translates to: EGKRLWRLCFSLETLTGIVYETM*MFVCMH Trigger: ATGCATGCATACAAACATGCACATAGTCTCATAAAC...AATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR TCA 72 bp | ACAGCACAGTGGACATGGGGGTGGGCTGCCGATAGATaGATACTCGGCGAAGGCACTCACAAAGGGCTGCAT | + |
Preference number: 3 (lower is better) Translates to: TAQWTWGWAADR*ILGEGTHKGLH Trigger: ATGCAGCCCTTTGTGAGTGCCTTCGCCGAGTATTCATCTATCGGCAGCCCACCCCCATGTCCACTGTGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 72 bp | GCATTGAAGGTGGCAATGTGCTCCCACATGTCGTCCTaGTTGCTGCAGTGTGGTTGCCAGAGGAGAGCATCG | + |
Preference number: 3 (lower is better) Translates to: ALKVAMCSHMSS*LLQCGCQRRAS Trigger: CGATGCTCTCCTCTGGCAACCACACTGCAGCAAGCAGGACGACATGTGGGAGCACATTGCCACCTTCAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CCA 72 bp | TGTGCCTTCTCTGATGAGATGGGGTCTCTCAGATCCTaGAGCTCACGGGTTCGGATCAACTGTGTGGACGGC | + |
Preference number: 3 (lower is better) Translates to: CAFSDEMGSLRS*SSRVRINCVDG Trigger: GCCGTCCACACAGTTGATCCGAACCCGTGAGCTCCAGGATCTGAGAGACCCCATCTCATCAGAGAAGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR GCA 72 bp | AGGTGGCAATGTGCTCCCACATGTCGTCCTGCTTGCTaGAGTGTGGTTGCCAGAGGAGAGCATCGACATCAT | + |
Preference number: 3 (lower is better) Translates to: RWQCAPTCRPAC*SVVARGEHRHH Trigger: ATGATGTCGATGCTCTCCTCTGGCAACCACACTGCAGCAAGCAGGACGACATGTGGGAGCACATTGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 72 bp | AGGCTTGCTACCTGCTGCTTAGCAACTTGCCCCACATaGCTGCCTTCCTTCCTGTTGTACAGCACAGTGGAC | + |
Preference number: 3 (lower is better) Translates to: RLATCCLATCPT*LPSFLLYSTVD Trigger: GTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCAGGTAGCAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR-3UTR CAA 90 bp | GATGAATACTCGGCGAAGGCACTCACAAAGGGCTGCATACGAGTAGTTTGGAGCCACATGTCGTCCTGCTaGCTGCAGTGTGGTTGCCAG | + |
Preference number: 3 (lower is better) Translates to: DEYSAKALTKGCIRVVWSHMSSC*LQCGCQ Trigger: CTGGCAACCACACTGCAGCAAGCAGGACGACATGTG...GCTCCAAACTACTCGTATGCAGCCCTTTGTGAGTGCCTTCGCCGAGTATTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 72 bp | TTGGTTTCTAGGCTTGCTACCTGCTGCTTAGCAACTTaGCCCACATGCCTGCCTTCCTTCCTGTTGTACAGC | + |
Preference number: 3 (lower is better) Translates to: LVSRLATCCLAT*PTCLPSFLLYS Trigger: GCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCAGGTAGCAAGCCTAGAAACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 72 bp | TGGAAAGAGAGACCCATTGGACACGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGG | + |
Preference number: 3 (lower is better) Translates to: WKERPIGHANFI*PSTGERQGQKG Trigger: CCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGGGTCTCTCTTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CCA 72 bp | CTGCAGTGTGGTTGCCAGAGGAGAGCATCGACATCATaGCGTAGACAGAAGCACGGCATTTCTTTAGGATCC | + |
Preference number: 3 (lower is better) Translates to: LQCGCQRRASTS*RRQKHGISLGS Trigger: GGATCCTAAAGAAATGCCGTGCTTCTGTCTACGCCATGATGTCGATGCTCTCCTCTGGCAACCACACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CCA 72 bp | AAGTGCTTTGCTCATTCTGTGCCTTCTCTGATGAGATaGGGTCTCTCAGATCCTGGAGCTCACGGGTTCGGA | + |
Preference number: 3 (lower is better) Translates to: KCFAHSVPSLMR*GLSDPGAHGFG Trigger: TCCGAACCCGTGAGCTCCAGGATCTGAGAGACCCCATCTCATCAGAGAAGGCACAGAATGAGCAAAGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR CAA 90 bp | TGCCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTGGACATGGGGGTGATTTCTTGTCTCTCTTaGAGGCTTGGACGTAACCTA | + |
Preference number: 3 (lower is better) Translates to: CPTCLPSFLLYSTVDMGVISCLS*RLGRNL Trigger: TAGGTTACGTCCAAGCCTCAAAGAGAGACAAGAAAT...CACCCCCATGTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 72 bp | CCTAAAATAGGATCATTGGTTTCTAGGCTTGCTACCTaGTGCTTAGCAACTTGCCCCACATGCCTGCCTTCC | + |
Preference number: 3 (lower is better) Translates to: PKIGSLVSRLAT*CLATCPTCLPS Trigger: GGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCAGGTAGCAAGCCTAGAAACCAATGATCCTATTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR GCA 72 bp | GGAATTCCAGGCCAGCCTGTGCTACATAGTGAGAGCTaGCTCCAAAATGTGATCCTAGACAAGACAGTACCA | + |
Preference number: 3 (lower is better) Translates to: GIPGQPVLHSES*LQNVILDKTVP Trigger: TGGTACTGTCTTGTCTAGGATCACATTTTGGAGGCAGCTCTCACTATGTAGCACAGGCTGGCCTGGAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR GCA 72 bp | CCAGATGTAGCTGTCTCTTGCAAACACAGAAGTGGATaGTCACAGTCAGCTAATGGATGGATCACAGGGCTC | + |
Preference number: 3 (lower is better) Translates to: PDVAVSCKHRSG*SQSANGWITGL Trigger: GAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCAAGAGACAGCTACATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CCA 72 bp | GGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGGAAAGAGAGACCCAT | + |
Preference number: 3 (lower is better) Translates to: GALDSSCICIKR*PSRPSLERETH Trigger: ATGGGTCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR-3UTR CAA 90 bp | GAAGGGAAGAGGTTGTGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTAGTACCCCGGAGCTCTaGACTCTAGCTGCATATGTA | + |
Preference number: 3 (lower is better) Translates to: EGKRLWRLCFSLETLTGISTPEL*TLAAYV Trigger: TACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACT...AATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
||
3UTR-3UTR CAA 90 bp | TTAGCAACTTGCCCCACATGCCTGCCTTCCTTCCTGTTGTACAGCACAGTGGACGATTCACCACATGAGTaGTTTGTAATGTATTGCCAT | + |
Preference number: 3 (lower is better) Translates to: LATCPTCLPSFLLYSTVDDSPHE*FVMYCH Trigger: ATGGCAATACATTACAAACAACTCATGTGGTGAATC...GTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
||
3UTR-3UTR CAA 90 bp | GAAGGGAAGAGGTTGTGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTCTTCTTCTTACTCTTTaGTCTCCTTGCTTGGCCTCC | + |
Preference number: 3 (lower is better) Translates to: EGKRLWRLCFSLETLTGILLLTL*SPCLAS Trigger: GGAGGCCAAGCAAGGAGACAAAAGAGTAAGAAGAAG...AATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
||
3UTR-3UTR CAA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCAGATGTAGCTGTCTCTaGCAAACACAGAAGTGGATG | + |
Preference number: 3 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIRCSCL*QTQKWM Trigger: CATCCACTTCTGTGTTTGCAAGAGACAGCTACATCT...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
||
3UTR TCA 72 bp | ACAGAAGCACGGCATTTCTTTAGGATCCACAATGACTaGGAACAGGTACTGGTTGCTGCCAAGATTCACCAC | + |
Preference number: 3 (lower is better) Translates to: TEARHFFRIHND*EQVLVAAKIHH Trigger: GTGGTGAATCTTGGCAGCAACCAGTACCTGTTCTCAGTCATTGTGGATCCTAAAGAAATGCCGTGCTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CCA 72 bp | AGGCTCATTAGGATTAACCCTGAAGGGAAGAGGTTGTaGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGA | + |
Preference number: 3 (lower is better) Translates to: RLIRINPEGKRL*RLCFSLETLTG Trigger: TCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTCAGGGTTAATCCTAATGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR TCA 72 bp | AACCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACGAAAGGATGGACCATGTAGAGACTGCCATA | + |
Preference number: 3 (lower is better) Translates to: NHGRSYRDKVWS*DERMDHVETAI Trigger: TATGGCAGTCTCTACATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
||
3UTR TCA 72 bp | AGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACACATTCACAAAGGAACTCACACAATAT | + |
Preference number: 3 (lower is better) Translates to: SQMDGPGGHHPE*GNTFTKELTQY Trigger: ATATTGTGTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
||
3UTR CCA 72 bp | AAACCCTCACAGGAATTTATGAAATTCCTAGCCAAATaGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA | + |
Preference number: 3 (lower is better) Translates to: KPSQEFMKFLAK*MDLEGIILSEV Trigger: TACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR TCA 72 bp | CTTGCTAAACACATGAAACTCAAGAAAAATGAAGACTaGAGTGTGGACACTATGCCCCTCCTTAGAAGTGGG | + |
Preference number: 3 (lower is better) Translates to: LAKHMKLKKNED*SVDTMPLLRSG Trigger: CCCACTTCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTTTTCTTGAGTTTCATGTGTTTAGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR GCA 72 bp | AGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTaGAAACACAGAAGTGGATGCTCACAGTCAGCTAAT | + |
Preference number: 3 (lower is better) Translates to: RFYRKDPDVAVS*KHRSGCSQSAN Trigger: ATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
||
3UTR TCA 72 bp | TGCATGTTTGTATGCATGCATATGAGGACCAAATATTaGCATCAAGTGCTTTGCTCATTCTGTGCCTTCTCT | + |
Preference number: 3 (lower is better) Translates to: CMFVCMHMRTKY*HQVLCSFCAFS Trigger: AGAGAAGGCACAGAATGAGCAAAGCACTTGATGTCAATATTTGGTCCTCATATGCATGCATACAAACATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR TCA 72 bp | TTGGTAGTGAGAACAAATAATCTCTCATTTGTTGCCTaGAAGCCTAAAATAGGATCATTGGTTTCTAGGCTT | + |
Preference number: 3 (lower is better) Translates to: LVVRTNNLSFVA*KPKIGSLVSRL Trigger: AAGCCTAGAAACCAATGATCCTATTTTAGGCTTTCAGGCAACAAATGAGAGATTATTTGTTCTCACTACCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CAA 72 bp | TTAGCAACTTGCCCCACATGCCTGCCTTCCTTCCTGTaGTACAGCACAGTGGACATGGGGGTGGGCTGCCGA | + |
Preference number: 4 (lower is better) Translates to: LATCPTCLPSFL*YSTVDMGVGCR Trigger: TCGGCAGCCCACCCCCATGTCCACTGTGCTGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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3UTR CAA 72 bp | TTGAAGGTGGCAATGTGCTCCCACATGTCGTCCTGCTaGCTGCAGTGTGGTTGCCAGAGGAGAGCATCGACA | + |
Preference number: 4 (lower is better) Translates to: LKVAMCSHMSSC*LQCGCQRRAST Trigger: TGTCGATGCTCTCCTCTGGCAACCACACTGCAGCAAGCAGGACGACATGTGGGAGCACATTGCCACCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226606.2 |
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CDS-3UTR TCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCCGTAACCTAGGGCATTaGAGGTGGCAATGTGCTCCC | + |
Preference number: 4 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIRNLGH*RWQCAP Trigger: GGGAGCACATTGCCACCTTCAATGCCCTAGGTTACG...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGACAGCACAGTGGACATaGGGGTGGGCTGCCGATAGA | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRTAQWT*GWAADR Trigger: TCTATCGGCAGCCCACCCCCATGTCCACTGTGCTGT...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGCGTAACCTAGGGCATTaGAGGTGGCAATGTGCTCCC | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRRNLGH*RWQCAP Trigger: GGGAGCACATTGCCACCTTCAATGCCCTAGGTTACG...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | ATTACAAGACAAACAGGGCCTCTCTGGAGGATAAGAAGAGCAAGGGCCAAAGCATTGCTGCAGTGTGGTTaGCAGAGGAGAGCATCGACA | + |
Preference number: 4 (lower is better) Translates to: ITRQTGPLWRIRRARAKALLQCG*QRRAST Trigger: TGTCGATGCTCTCCTCTGGCAACCACACTGCAGCAA...TGCTTTGGCCCTTGCTCTTCTTATCCTCCAGAGAGGCCCTGTTTGTCTTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | GAAGGGAAGAGGTTGTGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTTCCCACATGTCGTCCTaGTTGCTGCAGTGTGGTTGC | + |
Preference number: 4 (lower is better) Translates to: EGKRLWRLCFSLETLTGISHMSS*LLQCGC Trigger: GCAACCACACTGCAGCAAGCAGGACGACATGTGGGA...AATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGGCAACTTGCCCCACATaGCTGCCTTCCTTCCTGTTG | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRATCPT*LPSFLL Trigger: CAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGC...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CTCTGGTCCTTATGCTTATGTGGCAAACACTTTACCAACAGAGCAATCTCCCCAGCAACTTGCCCCACATaGCTGCCTTCCTTCCTGTTG | + |
Preference number: 4 (lower is better) Translates to: LWSLCLCGKHFTNRAISPATCPT*LPSFLL Trigger: CAACAGGAAGGAAGGCAGGCATGTGGGGCAAGTTGC...TGGGGAGATTGCTCTGTTGGTAAAGTGTTTGCCACATAAGCATAAGGACCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGTGCTGCTTAGCAACTTaGCCCACATGCCTGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRCCLAT*PTCLPS Trigger: GGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCA...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGACATGTCGTCCTGCTTaGTGCAGTGTGGTTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRTCRPA*CSVVAR Trigger: TCTGGCAACCACACTGCAGCAAGCAGGACGACATGT...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCGCACTCACAAAGGGCTaGATACGAGTAGTTTGGAGC | + |
Preference number: 4 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIALTKG*IRVVWS Trigger: GCTCCAAACTACTCGTATGCAGCCCTTTGTGAGTGC...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CTCTGGTCCTTATGCTTATGTGGCAAACACTTTACCAACAGAGCAATCTCCCCACTTGCCCCACATGCCTaGCTTCCTTCCTGTTGTACA | + |
Preference number: 4 (lower is better) Translates to: LWSLCLCGKHFTNRAISPLAPHA*LPSCCT Trigger: TGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAG...TGGGGAGATTGCTCTGTTGGTAAAGTGTTTGCCACATAAGCATAAGGACCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CTCTGGTCCTTATGCTTATGTGGCAAACACTTTACCAACAGAGCAATCTCCCCAGTGCATCAAGCGTTCTaGTATTGCAGCACATTGGGC | + |
Preference number: 4 (lower is better) Translates to: LWSLCLCGKHFTNRAISPVHQAF*YCSTLG Trigger: GCCCAATGTGCTGCAATAGCAGAACGCTTGATGCAC...TGGGGAGATTGCTCTGTTGGTAAAGTGTTTGCCACATAAGCATAAGGACCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACTGTCGTCCTGCTTGCTaGAGTGTGGTTGCCAGAGGA | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDCRPAC*SVVARG Trigger: TCCTCTGGCAACCACACTGCAGCAAGCAGGACGACA...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGGCACTCACAAAGGGCTaGATACGAGTAGTTTGGAGC | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRALTKG*IRVVWS Trigger: GCTCCAAACTACTCGTATGCAGCCCTTTGTGAGTGC...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAGAAGGGGATGTGAAATaGATAGATGCACAAAGACGA | + |
Preference number: 4 (lower is better) Translates to: ITGLPMEELEKVPKELKGEGDVK*IDAQRR Trigger: TCGTCTTTGTGCATCTATCCATTTCACATCCCCTTC...TCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCACTGAGAACAGGTACTaGTTGCTGCCAAGATTCACC | + |
Preference number: 4 (lower is better) Translates to: PSQEFMKFLAKWMDLEGITENRY*LLPRFT Trigger: GGTGAATCTTGGCAGCAACCAGTACCTGTTCTCAGT...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | CTCTGGTCCTTATGCTTATGTGGCAAACACTTTACCAACAGAGCAATCTCCCCAGGTCACCTGTTCCAATaGCATACAGTCTTCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: LWSLCLCGKHFTNRAISPGHLFQ*HTVFQF Trigger: GAACTGGAAGACTGTATGTCATTGGAACAGGTGACC...TGGGGAGATTGCTCTGTTGGTAAAGTGTTTGCCACATAAGCATAAGGACCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGAGGATCCACAATGACTaGGAACAGGTACTGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRRIHND*EQVLVA Trigger: AGCAACCAGTACCTGTTCTCAGTCATTGTGGATCCT...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTTATGAAATTCCTAGCTGTCGTCCTGCTTGCTaGAGTGTGGTTGCCAGAGGA | + |
Preference number: 4 (lower is better) Translates to: WRLCFSLETLTGIYEIPSCRPAC*SVVARG Trigger: TCCTCTGGCAACCACACTGCAGCAAGCAGGACGACA...GCTAGGAATTTCATAAATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTCCCACATGTCGTCCTaGTTGCTGCAGTGTGGTTGC | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILSHMSS*LLQCGC Trigger: GCAACCACACTGCAGCAAGCAGGACGACATGTGGGA...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACTTGAAGGTGGCAATGTaGTCCCACATGTCGTCCTGC | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDLKVAM*SHMSSC Trigger: GCAGGACGACATGTGGGAGCACATTGCCACCTTCAA...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACCTTGCCCCACATGCCTaGCTTCCTTCCTGTTGTACA | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDLAPHA*LPSCCT Trigger: TGTACAACAGGAAGGAAGGCAGGCATGTGGGGCAAG...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTGCTGCTTAGCAACTTaGCCCACATGCCTGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILCCLAT*PTCLPS Trigger: GGAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCA...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGTGCTTTCTGGAAGCCTaGCCGTTACTGTCAAATCAT | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRCFLEA*PLLSNH Trigger: ATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGCA...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGCTGCAGTGTGGTTaGCAGAGGAGAGCATCGACA | + |
Preference number: 4 (lower is better) Translates to: YSTTVQPSRYHWILFRQMLLQCG*QRRAST Trigger: TGTCGATGCTCTCCTCTGGCAACCACACTGCAGCAA...CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGATTGAAGGTGGCAATGTaGTCCCACATGTCGTCCTGC | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFRLKVAM*SHMSSC Trigger: GCAGGACGACATGTGGGAGCACATTGCCACCTTCAA...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTCTAGGCTTGCTACCTaGTGCTTAGCAACTTGCCCC | + |
Preference number: 4 (lower is better) Translates to: YSTTVQPSRYHWILFRQMSRLAT*CLATCP Trigger: GGGGCAAGTTGCTAAGCAGCAGGTAGCAAGCCTAGA...CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGATCTAGGCTTGCTACCTaGTGCTTAGCAACTTGCCCC | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFRSRLAT*CLATCP Trigger: GGGGCAAGTTGCTAAGCAGCAGGTAGCAAGCCTAGA...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATTCCTTATCTGGATTTaGATTCAGTTCATCAGAGGT | + |
Preference number: 4 (lower is better) Translates to: ITGLPMEELEKVPKELKGFLIWI*IQFIRG Trigger: ACCTCTGATGAACTGAATCCAAATCCAGATAAGGAA...TCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | CTGCTTGCTGTAAAACAAGGGTTGAAAGCAAATATTGTCAAAACTGCTGTATTCACAGCACAGTGGACATaGGGGTGGGCTGCCGATAGA | + |
Preference number: 4 (lower is better) Translates to: LLAVKQGLKANIVKTAVFTAQWT*GWAADR Trigger: TCTATCGGCAGCCCACCCCCATGTCCACTGTGCTGT...GAATACAGCAGTTTTGACAATATTTGCTTTCAACCCTTGTTTTACAGCAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGACAGAGGTTCTACTTTaGTTTTCTCTGGCCTGTCTT | + |
Preference number: 4 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRTEVLL*FSLACL Trigger: AAGACAGGCCAGAGAAAATCAAAGTAGAACCTCTGT...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGATACTTCTGCCACAGCTaGATCAAGCTCCAGCTGGTA | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFRYFCHS*IKLQLV Trigger: TACCAGCTGGAGCTTGATGCAGCTGTGGCAGAAGTA...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | ATATTTAATGTGGGTGACAGGGATCTAAACTCTGGTCCTTATGCTTATGTGGCATACTTCTGCCACAGCTaGATCAAGCTCCAGCTGGTA | + |
Preference number: 4 (lower is better) Translates to: IFNVGDRDLNSGPYAYVAYFCHS*IKLQLV Trigger: TACCAGCTGGAGCTTGATGCAGCTGTGGCAGAAGTA...TGCCACATAAGCATAAGGACCAGAGTTTAGATCCCTGTCACCCACATTAAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTGTGCATCAAGCGTTCTaGTATTGCAGCACATTGGGC | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILVHQAF*YCSTLG Trigger: GCCCAATGTGCTGCAATAGCAGAACGCTTGATGCAC...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCTTCTTGAGCATTACATaGAGGCTTTTCCTTATCTGG | + |
Preference number: 4 (lower is better) Translates to: PSQEFMKFLAKWMDLEGIFLSIT*RLFLIW Trigger: CCAGATAAGGAAAAGCCTGCATGTAATGCTCAAGAA...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CAA 72 bp | ACAAAACAACCATGGAAGGAGTTACAGAGACAAAGTTaGGAGCTGAGACGAAAGGATGGACCATGTAGAGAC | + |
Preference number: 4 (lower is better) Translates to: TKQPWKELQRQS*ELRRKDGPCRD Trigger: GTCTCTACATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGAGGTCACCTGTTCCAATaGCATACAGTCTTCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFRGHLFQ*HTVFQF Trigger: GAACTGGAAGACTGTATGTCATTGGAACAGGTGACC...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTAGCATAATGTGGCACTaGCTTTCCACGGAGAACATG | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILSIMWH*LSTENM Trigger: CATGTTCTCCGTGGAAAGTCAGTGCCACATTATGCT...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | ATATTTAATGTGGGTGACAGGGATCTAAACTCTGGTCCTTATGCTTATGTGGCAAGCATAATGTGGCACTaGCTTTCCACGGAGAACATG | + |
Preference number: 4 (lower is better) Translates to: IFNVGDRDLNSGPYAYVASIMWH*LSTENM Trigger: CATGTTCTCCGTGGAAAGTCAGTGCCACATTATGCT...TGCCACATAAGCATAAGGACCAGAGTTTAGATCCCTGTCACCCACATTAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | ATTACAAGACAAACAGGGCCTCTCTGGAGGATAAGAAGAGCAAGGGCCAAAGCACATTCTTCTAATTCTTaGGCATTACATGCAGGCTTT | + |
Preference number: 4 (lower is better) Translates to: ITRQTGPLWRIRRARAKAHSSNS*ALHAGF Trigger: AAAGCCTGCATGTAATGCTCAAGAATTAGAAGAATG...TGCTTTGGCCCTTGCTCTTCTTATCCTCCAGAGAGGCCCTGTTTGTCTTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | TATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGAGGATCCACAATGACTaGGAACAGGTACTGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: YSTTVQPSRYHWILFRQMRIHND*EQVLVA Trigger: AGCAACCAGTACCTGTTCTCAGTCATTGTGGATCCT...CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | CTCTGGTCCTTATGCTTATGTGGCAAACACTTTACCAACAGAGCAATCTCCCCACTCTCATTTGTTGCCTaGAAGCCTAAAATAGGATCA | + |
Preference number: 4 (lower is better) Translates to: LWSLCLCGKHFTNRAISPLSFVA*KPKIGS Trigger: TGATCCTATTTTAGGCTTTCAGGCAACAAATGAGAG...TGGGGAGATTGCTCTGTTGGTAAAGTGTTTGCCACATAAGCATAAGGACCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGACAGGTACTGGTTGCTaGCAAGATTCACCACATGAG | + |
Preference number: 4 (lower is better) Translates to: YSTTVQPSRYHWILFRQMTGTGC*QDSPHE Trigger: CTCATGTGGTGAATCTTGGCAGCAACCAGTACCTGT...CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CTGCTTGCTGTAAAACAAGGGTTGAAAGCAAATATTGTCAAAACTGCTGTATTCACATGTCGTCCTGCTTaGTGCAGTGTGGTTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: LLAVKQGLKANIVKTAVFTCRPA*CSVVAR Trigger: TCTGGCAACCACACTGCAGCAAGCAGGACGACATGT...GAATACAGCAGTTTTGACAATATTTGCTTTCAACCCTTGTTTTACAGCAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACCTTAGTACTGCTTTCTaGAAGCCTGACCGTTACTGT | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDLSTAF*KPDRYC Trigger: ACAGTAACGGTCAGGCTTCCAGAAAGCAGTACTAAG...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTACTGAGAACAGGTACTaGTTGCTGCCAAGATTCACC | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILTENRY*LLPRFT Trigger: GGTGAATCTTGGCAGCAACCAGTACCTGTTCTCAGT...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGATGCTTTCTGGAAGCCTaGCCGTTACTGTCAAATCAT | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFRCFLEA*PLLSNH Trigger: ATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGCA...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTCGAAGTTTTACTTCTaGCACAGCTGCATCAAGCTC | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILSKFYF*HSCIKL Trigger: GAGCTTGATGCAGCTGTGGCAGAAGTAAAACTTCGA...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTTATGAAATTCCTAGCTCGAAGTTTTACTTCTaGCACAGCTGCATCAAGCTC | + |
Preference number: 4 (lower is better) Translates to: WRLCFSLETLTGIYEIPSSKFYF*HSCIKL Trigger: GAGCTTGATGCAGCTGTGGCAGAAGTAAAACTTCGA...GCTAGGAATTTCATAAATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGAAGAACAGGTACTGGTTaGTGCCAAGATTCACCACAT | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFRRTGTG*CQDSPH Trigger: ATGTGGTGAATCTTGGCAGCAACCAGTACCTGTTCT...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | ATATTTAATGTGGGTGACAGGGATCTAAACTCTGGTCCTTATGCTTATGTGGCAAGAACAGGTACTGGTTaGTGCCAAGATTCACCACAT | + |
Preference number: 4 (lower is better) Translates to: IFNVGDRDLNSGPYAYVARTGTG*CQDSPH Trigger: ATGTGGTGAATCTTGGCAGCAACCAGTACCTGTTCT...TGCCACATAAGCATAAGGACCAGAGTTTAGATCCCTGTCACCCACATTAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | ATATTTAATGTGGGTGACAGGGATCTAAACTCTGGTCCTTATGCTTATGTGGCACTTAGTACTGCTTTCTaGAAGCCTGACCGTTACTGT | + |
Preference number: 4 (lower is better) Translates to: IFNVGDRDLNSGPYAYVALSTAF*KPDRYC Trigger: ACAGTAACGGTCAGGCTTCCAGAAAGCAGTACTAAG...TGCCACATAAGCATAAGGACCAGAGTTTAGATCCCTGTCACCCACATTAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CAA 72 bp | GTGCATGTTTGTATGCATGCATATGAGGACCAAATATaGACATCAAGTGCTTTGCTCATTCTGTGCCTTCTC | + |
Preference number: 4 (lower is better) Translates to: VHVCMHAYEDQI*TSSALLILCLL Trigger: GAGAAGGCACAGAATGAGCAAAGCACTTGATGTCAATATTTGGTCCTCATATGCATGCATACAAACATGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACCTCTCATTTGTTGCCTaGAAGCCTAAAATAGGATCA | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDLSFVA*KPKIGS Trigger: TGATCCTATTTTAGGCTTTCAGGCAACAAATGAGAG...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGAGAAGGGGATGTGAAATaGATAGATGCACAAAGACGA | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFREGDVK*IDAQRR Trigger: TCGTCTTTGTGCATCTATCCATTTCACATCCCCTTC...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | TATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGAATACAGAGGTTCTTTaGTTTTCTCTGGCCTGTCTT | + |
Preference number: 4 (lower is better) Translates to: YSTTVQPSRYHWILFRQMNTEVL*FSLACL Trigger: AAGACAGGCCAGAGAAAATCAAAGAACCTCTGTATT...CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038719.8 |
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CDS-3UTR GCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTAAGACGATTGTCATATaGTGTCACATCTGTAGGAAG | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILKTIVI*CHICRK Trigger: CTTCCTACAGATGTGACAGCATATGACAATCGTCTT...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTTATGAAATTCCTAGCAAGACGATTGTCATATaGTGTCACATCTGTAGGAAG | + |
Preference number: 4 (lower is better) Translates to: WRLCFSLETLTGIYEIPSKTIVI*CHICRK Trigger: CTTCCTACAGATGTGACAGCATATGACAATCGTCTT...GCTAGGAATTTCATAAATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGATTCTTGAGCATTACATaGAGGCTTTTCCTTATCTGG | + |
Preference number: 4 (lower is better) Translates to: SSYSTTVQPSRYHWILFRFLSIT*RLFLIW Trigger: CCAGATAAGGAAAAGCCTGCATGTAATGCTCAAGAA...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACTTCCTTATCTGGATTTaGATTCAGTTCATCAGAGGT | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDFLIWI*IQFIRG Trigger: ACCTCTGATGAACTGAATCCAAATCCAGATAAGGAA...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAGGCTTTTCCTTATCTaGATTTGGATTCAGTTCATC | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDRLFLI*IWIQFI Trigger: GATGAACTGAATCCAAATCCAGATAAGGAAAAGCCT...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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3UTR CAA 72 bp | ACTTTACCAACAGAGCAATCTCCCCAGACCAAATACTaGTTTAATCTAATCCAGGCAGGTATTTGTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: TLPTEQSPQTKY*FNLIQAGICSR Trigger: TCTGGAACAAATACCTGCCTGGATTAGATTAAACAAGTATTTGGTCTGGGGAGATTGCTCTGTTGGTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR TCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTCATTCTTCTAATTCTTaGGCATTACATGCAGGCTTT | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILHSSNS*ALHAGF Trigger: AAAGCCTGCATGTAATGCTCAAGAATTAGAAGAATG...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACTACATCCCAAAAGCATaGATGTGTTCTAATGTATAC | + |
Preference number: 4 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDYIPKA*MCSNVY Trigger: GTATACATTAGAACACATGCATGCTTTTGGGATGTA...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTATTGCCATCAAATCTaGATAAACTGGAGCTCTCTT | + |
Preference number: 4 (lower is better) Translates to: NLSSYSTTVQPSRYHWILYCHQI*INWSSL Trigger: AAGAGAGCTCCAGTTTATGCAGATTTGATGGCAATA...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CCA 90 bp | TATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTTCCTTCCAAAACTTaGATATCCTTCAGCTTAATG | + |
Preference number: 4 (lower is better) Translates to: YSTTVQPSRYHWILFRQMFPSKT*ISFSLM Trigger: CATTAAGCTGAAGGATATCCAAGTTTTGGAAGGAAA...CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR GCA 90 bp | CTGCTTGCTGTAAAACAAGGGTTGAAAGCAAATATTGTCAAAACTGCTGTATTCTATTGCCATCAAATCTaGATAAACTGGAGCTCTCTT | + |
Preference number: 4 (lower is better) Translates to: LLAVKQGLKANIVKTAVFYCHQI*INWSSL Trigger: AAGAGAGCTCCAGTTTATGCAGATTTGATGGCAATA...GAATACAGCAGTTTTGACAATATTTGCTTTCAACCCTTGTTTTACAGCAAGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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3UTR CAA 72 bp | GAAAATAAAAACACAACAATCCATACTGGATACAAATaGAAGGAAGTTTGGAGAGGAAGTCTGAACCACAAA | + |
Preference number: 4 (lower is better) Translates to: ENKNTTIHTGYK*KEVWRGSLNHK Trigger: TTTGTGGTTCAGACTTCCTCTCCAAACTTCCTTCAATTTGTATCCAGTATGGATTGTTGTGTTTTTATTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAACACATGTCGTCCTGCTaGCTGCAGTGTGGTTGCCAG | + |
Preference number: 5 (lower is better) Translates to: PLDTQTLYAPVQGNARAKHMSSC*LQCGCQ Trigger: CTGGCAACCACACTGCAGCAAGCAGGACGACATGTG...TTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAGAGAACAGGTACTGGTaGCTGCCAAGATTCACCACA | + |
Preference number: 5 (lower is better) Translates to: PLDTQTLYAPVQGNARAKENRYW*LPRFTT Trigger: TGTGGTGAATCTTGGCAGCAACCAGTACCTGTTCTC...TTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CCCTCACAGGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCCTGCTGCTTAGCAACTaGCCCCACATGCCTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: PSQEFMKFLAKWMDLEGILLLSN*PHMPAF Trigger: GAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCAG...GATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCCTGTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGCACATGTCGTCCTGCTaGCTGCAGTGTGGTTGCCAG | + |
Preference number: 5 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRHMSSC*LQCGCQ Trigger: CTGGCAACCACACTGCAGCAAGCAGGACGACATGTG...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGCTGCCTTCCTTCCTGTaGTACAGCACAGTGGACATG | + |
Preference number: 5 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRLPSFL*YSTVDM Trigger: CATGTCCACTGTGCTGTACAACAGGAAGGAAGGCAG...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | GAAGGGAAGAGGTTGTGGCGCCTTTGTTTTTCACTAGAAACCCTCACAGGAATTCTGCCTTCCTTCCTGTaGTACAGCACAGTGGACATG | + |
Preference number: 5 (lower is better) Translates to: EGKRLWRLCFSLETLTGILPSFL*YSTVDM Trigger: CATGTCCACTGTGCTGTACAACAGGAAGGAAGGCAG...AATTCCTGTGAGGGTTTCTAGTGAAAAACAAAGGCGCCACAACCTCTTCCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACCTGCTGCTTAGCAACTaGCCCCACATGCCTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDLLLSN*PHMPAF Trigger: GAAGGCAGGCATGTGGGGCAAGTTGCTAAGCAGCAG...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS TCA 90 bp | TCCACGGTCACCTGTTCCAATGACATACAGTCTTCCAGTTCCATCTaGCAAGGTAACCCAGGAAGGGGATGTGAAATGGATAGATGCACA | + |
Preference number: 5 (lower is better) Translates to: STVTCSNDIQSSSSI*QGNPGRGCEMDRCT Trigger: TGTGCATCTATCCATTTCACATCCCCTTCCTGGGTTACCTTGTCAGATGGAACTGGAAGACTGTATGTCATTGGAACAGGTGACCGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CCA 90 bp | TCATCAGAGGTCAGGTGCATCAAGCGTTCTGCTATTGCAGCACATTaGGCAGGGTCTCTTAAAAGTTCACCTTGTTTATCACCAACCACC | + |
Preference number: 5 (lower is better) Translates to: SSEVRCIKRSAIAAH*AGSLKSSPCLSPTT Trigger: GGTGGTTGGTGATAAACAAGGTGAACTTTTAAGAGACCCTGCCCAATGTGCTGCAATAGCAGAACGCTTGATGCACCTGACCTCTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGACAAATCATCCTCACTTaGTTGCCAGTAATACAGAGG | + |
Preference number: 5 (lower is better) Translates to: ITGLPMEELEKVPKELKGQIILT*LPVIQR Trigger: CCTCTGTATTACTGGCAACAAAGTGAGGATGATTTG...TCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAATTTCCTTATCTGGATTaGGATTCAGTTCATCAGAGG | + |
Preference number: 5 (lower is better) Translates to: PLDTQTLYAPVQGNARAKFPYLD*DSVHQR Trigger: CCTCTGATGAACTGAATCCAAATCCAGATAAGGAAA...TTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS CCA 90 bp | CTTCCAGTTCCATCTGACAAGGTAACCCAGGAAGGGGATGTGAAATaGATAGATGCACAAAGACGATTGTCATATGCTGTCACATCTGTA | + |
Preference number: 5 (lower is better) Translates to: LPVPSDKVTQEGDVK*IDAQRRLSYAVTSV Trigger: TACAGATGTGACAGCATATGACAATCGTCTTTGTGCATCTATCCATTTCACATCCCCTTCCTGGGTTACCTTGTCAGATGGAACTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACGTAGTAGACACTGTCTaGATACCAGGCATCACAGTG | + |
Preference number: 5 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDVVDTV*IPGITV Trigger: CACTGTGATGCCTGGTATCAAGACAGTGTCTACTAC...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | TCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGAGAGAACAGGTACTGGTaGCTGCCAAGATTCACCACA | + |
Preference number: 5 (lower is better) Translates to: SSYSTTVQPSRYHWILFRENRYW*LPRFTT Trigger: TGTGGTGAATCTTGGCAGCAACCAGTACCTGTTCTC...TCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CTCTGGTCCTTATGCTTATGTGGCAAACACTTTACCAACAGAGCAATCTCCCCACCTAAAATAGGATCATaGGTTTCTAGGCTTGCTACC | + |
Preference number: 5 (lower is better) Translates to: LWSLCLCGKHFTNRAISPPKIGS*VSRLAT Trigger: GGTAGCAAGCCTAGAAACCAATGATCCTATTTTAGG...TGGGGAGATTGCTCTGTTGGTAAAGTGTTTGCCACATAAGCATAAGGACCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACGATGCACAAAGACGATaGTCATATGCTGTCACATCT | + |
Preference number: 5 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDDAQRR*SYAVTS Trigger: AGATGTGACAGCATATGACAATCGTCTTTGTGCATC...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACCAAATCATCCTCACTTaGTTGCCAGTAATACAGAGG | + |
Preference number: 5 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDQIILT*LPVIQR Trigger: CCTCTGTATTACTGGCAACAAAGTGAGGATGATTTG...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTGGAGGGATTCACCACATGAGTaGTTTGTAATGTATTGCCAT | + |
Preference number: 5 (lower is better) Translates to: QLFSPPGTTGYFLDKCWRDSPHE*FVMYCH Trigger: ATGGCAATACATTACAAACAACTCATGTGGTGAATC...CCTCCAACATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | ATATTTAATGTGGGTGACAGGGATCTAAACTCTGGTCCTTATGCTTATGTGGCAGATGCACAAAGACGATaGTCATATGCTGTCACATCT | + |
Preference number: 5 (lower is better) Translates to: IFNVGDRDLNSGPYAYVADAQRR*SYAVTS Trigger: AGATGTGACAGCATATGACAATCGTCTTTGTGCATC...TGCCACATAAGCATAAGGACCAGAGTTTAGATCCCTGTCACCCACATTAAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTATTTCTTGTCTCTCTTaGAGGCTTGGACGTAACCTA | + |
Preference number: 5 (lower is better) Translates to: NLSSYSTTVQPSRYHWILISCLS*RLGRNL Trigger: TAGGTTACGTCCAAGCCTCAAAGAGAGACAAGAAAT...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | AACTTATCAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTCCTAAAATAGGATCATaGGTTTCTAGGCTTGCTACC | + |
Preference number: 5 (lower is better) Translates to: NLSSYSTTVQPSRYHWILPKIGS*VSRLAT Trigger: GGTAGCAAGCCTAGAAACCAATGATCCTATTTTAGG...AAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTGATAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | TATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACAAATGTTTCCTTATCTGGATTaGGATTCAGTTCATCAGAGG | + |
Preference number: 5 (lower is better) Translates to: YSTTVQPSRYHWILFRQMFPYLD*DSVHQR Trigger: CCTCTGATGAACTGAATCCAAATCCAGATAAGGAAA...CATTTGTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS-3UTR CAA 90 bp | CAAGTTATAGTACAACTGTTCAGCCCTCCAGGTACCACTGGATACTTTTTAGACGATTCACCACATGAGTaGTTTGTAATGTATTGCCAT | + |
Preference number: 5 (lower is better) Translates to: QVIVQLFSPPGTTGYFLDDSPHE*FVMYCH Trigger: ATGGCAATACATTACAAACAACTCATGTGGTGAATC...GTCTAAAAAGTATCCAGTGGTACCTGGAGGGCTGAACAGTTGTACTATAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CCA 90 bp | ATCAGGCAAAAATTGTATTTGAATATCTTCCTTAGTACTGCTTTCTaGAAGCCTGACCGTTACTGTCAAATCATCCTCACTTTGTTGCCA | + |
Preference number: 5 (lower is better) Translates to: IRQKLYLNIFLSTAF*KPDRYCQIILTLLP Trigger: TGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGCAGTACTAAGGAAGATATTCAAATACAATTTTTGCCTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS TCA 90 bp | ATCATTCTCTTTAATTGTCCATGTGCTGCCTTCGTGATCAATAGATaGATAGAGTTTTCCTTCCAAAACTTGGATATCCTTCAGCTTAAT | + |
Preference number: 5 (lower is better) Translates to: IILFNCPCAAFVINR*IEFSFQNLDILQLN Trigger: ATTAAGCTGAAGGATATCCAAGTTTTGGAAGGAAAACTCTATTCATCTATTGATCACGAAGGCAGCACATGGACAATTAAAGAGAATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CAA 90 bp | GTAACCCAGGAAGGGGATGTGAAATGGATAGATGCACAAAGACGATaGTCATATGCTGTCACATCTGTAGGAAGGCGGAACACCTCTCGG | + |
Preference number: 6 (lower is better) Translates to: VTQEGDVKWIDAQRR*SYAVTSVGRRNTSR Trigger: CCGAGAGGTGTTCCGCCTTCCTACAGATGTGACAGCATATGACAATCGTCTTTGTGCATCTATCCATTTCACATCCCCTTCCTGGGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS GCA 72 bp | TGTGAAATGGATAGATGCACAAAGACGATTGTCATATaGTGTCACATCTGTAGGAAGGCGGAACACCTCTCG | + |
Preference number: 6 (lower is better) Translates to: CEMDRCTKTIVI*CHICRKAEHLS Trigger: CGAGAGGTGTTCCGCCTTCCTACAGATGTGACAGCATATGACAATCGTCTTTGTGCATCTATCCATTTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS GCA 72 bp | TTATCTGGATTTGGATTCAGTTCATCAGAGGTCAGGTaGATCAAGCGTTCTGCTATTGCAGCACATTGGGCA | + |
Preference number: 6 (lower is better) Translates to: LSGFGFSSSEVR*IKRSAIAAHWA Trigger: TGCCCAATGTGCTGCAATAGCAGAACGCTTGATGCACCTGACCTCTGATGAACTGAATCCAAATCCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CCA 72 bp | GTCAGGTGCATCAAGCGTTCTGCTATTGCAGCACATTaGGCAGGGTCTCTTAAAAGTTCACCTTGTTTATCA | + |
Preference number: 6 (lower is better) Translates to: VRCIKRSAIAAH*AGSLKSSPCLS Trigger: TGATAAACAAGGTGAACTTTTAAGAGACCCTGCCCAATGTGCTGCAATAGCAGAACGCTTGATGCACCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CAA 72 bp | GAAGGGGATGTGAAATGGATAGATGCACAAAGACGATaGTCATATGCTGTCACATCTGTAGGAAGGCGGAAC | + |
Preference number: 6 (lower is better) Translates to: EGDVKWIDAQRR*SYAVTSVGRRN Trigger: GTTCCGCCTTCCTACAGATGTGACAGCATATGACAATCGTCTTTGTGCATCTATCCATTTCACATCCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CAA 90 bp | GCTTTCTGGAAGCCTGACCGTTACTGTCAAATCATCCTCACTTTGTaGCCAGTAATACAGAGGTTCTTTGATTTTCTCTGGCCTGTCTTC | + |
Preference number: 6 (lower is better) Translates to: AFWKPDRYCQIILTL*PVIQRFFDFLWPVF Trigger: GAAGACAGGCCAGAGAAAATCAAAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038719.8 |
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CDS CAA 90 bp | ACTGCTTTCTGGAAGCCTGACCGTTACTGTCAAATCATCCTCACTTaGTTGCCAGTAATACAGAGGTTCTTTGATTTTCTCTGGCCTGTC | + |
Preference number: 6 (lower is better) Translates to: TAFWKPDRYCQIILT*LPVIQRFFDFLWPV Trigger: GACAGGCCAGAGAAAATCAAAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038719.8 |
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CDS CAA 90 bp | GCTTTCTGGAAGCCTGACCGTTACTGTCAAATCATCCTCACTTTGTaGCCAGTAATACAGAGGTTCTACTTTGATTTTCTCTGGCCTGTC | + |
Preference number: 6 (lower is better) Translates to: AFWKPDRYCQIILTL*PVIQRFYFDFLWPV Trigger: GACAGGCCAGAGAAAATCAAAGTAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS CCA 72 bp | TTGAGCATTACATGCAGGCTTTTCCTTATCTGGATTTaGATTCAGTTCATCAGAGGTCAGGTGCATCAAGCG | + |
Preference number: 6 (lower is better) Translates to: LSITCRLFLIWI*IQFIRGQVHQA Trigger: CGCTTGATGCACCTGACCTCTGATGAACTGAATCCAAATCCAGATAAGGAAAAGCCTGCATGTAATGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CAA 90 bp | ACTGCTTTCTGGAAGCCTGACCGTTACTGTCAAATCATCCTCACTTaGTTGCCAGTAATACAGAGGTTCTACTTTGATTTTCTCTGGCCT | + |
Preference number: 6 (lower is better) Translates to: TAFWKPDRYCQIILT*LPVIQRFYFDFLWP Trigger: AGGCCAGAGAAAATCAAAGTAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS CCA 72 bp | TACATCCCAAAAGCATGCATGTGTTCTAATGTATACTaGTCATCTCGAAGTTTTACTTCTGCCACAGCTGCA | + |
Preference number: 6 (lower is better) Translates to: YIPKACMCSNVY*SSRSFTSATAA Trigger: TGCAGCTGTGGCAGAAGTAAAACTTCGAGATGACCAGTATACATTAGAACACATGCATGCTTTTGGGATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CAA 72 bp | AAGCCTGACCGTTACTGTCAAATCATCCTCACTTTGTaGCCAGTAATACAGAGGTTCTTTGATTTTCTCTGG | + |
Preference number: 6 (lower is better) Translates to: KPDRYCQIILTL*PVIQRFFDFLW Trigger: CCAGAGAAAATCAAAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038719.8 |
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CDS CAA 72 bp | TGGAAGCCTGACCGTTACTGTCAAATCATCCTCACTTaGTTGCCAGTAATACAGAGGTTCTTTGATTTTCTC | + |
Preference number: 6 (lower is better) Translates to: WKPDRYCQIILT*LPVIQRFFDFL Trigger: GAGAAAATCAAAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038719.8 |
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CDS CAA 72 bp | AAGCCTGACCGTTACTGTCAAATCATCCTCACTTTGTaGCCAGTAATACAGAGGTTCTACTTTGATTTTCTC | + |
Preference number: 6 (lower is better) Translates to: KPDRYCQIILTL*PVIQRFYFDFL Trigger: GAGAAAATCAAAGTAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS CAA 72 bp | TGGAAGCCTGACCGTTACTGTCAAATCATCCTCACTTaGTTGCCAGTAATACAGAGGTTCTACTTTGATTTT | + |
Preference number: 6 (lower is better) Translates to: WKPDRYCQIILT*LPVIQRFYFDF Trigger: AAAATCAAAGTAGAACCTCTGTATTACTGGCAACAAAGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227843.2 |
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CDS CCA 72 bp | AAATTGTATTTGAATATCTTCCTTAGTACTGCTTTCTaGAAGCCTGACCGTTACTGTCAAATCATCCTCACT | + |
Preference number: 6 (lower is better) Translates to: KLYLNIFLSTAF*KPDRYCQIILT Trigger: AGTGAGGATGATTTGACAGTAACGGTCAGGCTTCCAGAAAGCAGTACTAAGGAAGATATTCAAATACAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS TCA 72 bp | ACTGAATGTTCTTCAGCTTTCAGCAGTGAGATACTGTaGATTATAATAAAAGGGTTCCCAAGCTCTTCATTA | + |
Preference number: 6 (lower is better) Translates to: TECSSAFSSEIL*IIIKGFPSSSL Trigger: TAATGAAGAGCTTGGGAACCCTTTTATTATAATTCACAGTATCTCACTGCTGAAAGCTGAAGAACATTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |
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CDS CAA 72 bp | AATTCTTCCAAGGTTATCAATGTAGTAGACACTGTCTaGATACCAGGCATCACAGTGCAGATAATTATACAT | + |
Preference number: 6 (lower is better) Translates to: NSSKVINVVDTV*IPGITVQIIIH Trigger: ATGTATAATTATCTGCACTGTGATGCCTGGTATCAAGACAGTGTCTACTACATTGATAACCTTGGAAGAATT 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038719.8 ENSMUST00000227843.2 |