Pregenerated sensors for NUCB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030659Ensembl transcript IDs: ENSMUST00000032895.15, ENSMUST00000183175.8, ENSMUST00000183335.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTCGAGGTGGTCGTGCTGCCGCTGCAGATCCTCCTTCTGTTTCTaGAGCTCTTCCGCCCTCTTCTTAAGCTCGTTCTCTTGGATAGCA | + |
|
Preference number: 1 (lower is better) Translates to: ASRWSCCRCRSSFCF*SSSALFLSSFSWIA Trigger: TGCTATCCAAGAGAACGAGCTTAAGAAGAGGGCGGAAGAGCTGCAGAAACAGAAGGAGGATCTGCAGCGGCAGCACGACCACCTCGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR TCA 90 bp | TTCCTCCAGAGTCACCAATCGGTCTTTGTTGTTATCAATACTCCATaGTCGGGCCTTGAGCTGCTCATGTTCCTTATGTCATCCAGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: FLQSHQSVFVVINTP*SGLELLMFLMSSSE Trigger: CTCACTGGATGACATAAGGAACATGAGCAGCTCAAGGCCCGATCATGGAGTATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR GCA 90 bp | ATAATGCTTTCATACTCTTTAAGCTCGTCCTCGGTGAATAACTGTTaGTGGTCCAGTGTCTCCCAGCTATCAGGCTCCAGGAATTCTTTC | + |
|
Preference number: 1 (lower is better) Translates to: IMLSYSLSSSSVNNC*WSSVSQLSGSRNSF Trigger: GAAAGAATTCCTGGAGCCTGATAGCTGGGAGACACTGGACCAGCAACAGTTATTCACCGAGGACGAGCTTAAAGAGTATGAAAGCATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR CAA 90 bp | TCTGTAGCTCTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTTGTaGTTATCAATACTCCATGATCGGGCCTTGAGCTGCTCATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SVALRNSSRVTNRSL*LSILHDRALSCSCS Trigger: GGAACATGAGCAGCTCAAGGCCCGATCATGGAGTATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAGAGCTACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR CAA 90 bp | TTCTCTGTAGCTCTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTaGTTGTTATCAATACTCCATGATCGGGCCTTGAGCTGCTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: FSVALRNSSRVTNRS*LLSILHDRALSCSC Trigger: ACATGAGCAGCTCAAGGCCCGATCATGGAGTATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAGAGCTACAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTAAGCTCGTTCTCTTGGATAGCAATAATGCTTTCATACTCTTTAAGCTCCCTTATGTCATCCAGTaGGGGATCGCTCCTGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LLKLVLLDSNNAFILFKLPYVIQ*GIAPEA Trigger: GGCTTCAGGAGCGATCCCTCACTGGATGACATAAGG...GAGCTTAAAGAGTATGAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCGCCCTCTTCTTAAGCTCGTTCTCTTGGATAGCAATAATGCTTTCATACTCTGATCGGGCCTTGAGCTaGTCATGTTCCTTATGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SALFLSSFSWIAIMLSYSDRALS*SCSLCH Trigger: ATGACATAAGGAACATGAGCAGCTCAAGGCCCGATC...AGAGTATGAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAGAAGAGGGCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR-3UTR CCA 90 bp | CGCCCTCTTCTTAAGCTCGTTCTCTTGGATAGCAATAATGCTTTCATACTCTTTATCGCTCCTGAAGCCTaGGAATATAGGACACGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RPLLKLVLLDSNNAFILFIAPEA*EYRTRK Trigger: CTTCCGTGTCCTATATTCCCAGGCTTCAGGAGCGAT...AAAGAGTATGAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAGAAGAGGGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR-3UTR CCA 90 bp | CGCCCTCTTCTTAAGCTCGTTCTCTTGGATAGCAATAATGCTTTCATACTCTTTGTGAATAACTGTTGCTaGTCCAGTGTCTCCCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RPLLKLVLLDSNNAFILFVNNCC*SSVSQL Trigger: TAGCTGGGAGACACTGGACCAGCAACAGTTATTCAC...AAAGAGTATGAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAGAAGAGGGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTTAAGCTCGTTCTCTTGGATAGCAATAATGCTTTCATACTCTTTAAGCTCTCGGTGAATAACTGTTaGTGGTCCAGTGTCTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLKLVLLDSNNAFILFKLSVNNC*WSSVSQ Trigger: CTGGGAGACACTGGACCAGCAACAGTTATTCACCGA...GAGCTTAAAGAGTATGAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR GCA 72 bp | TCCTGCTTCTGCGCCTCGAGGTGGTCGTGCTGCCGCTaGAGATCCTCCTTCTGTTTCTGCAGCTCTTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SCFCASRWSCCR*RSSFCFCSSSA Trigger: GGCGGAAGAGCTGCAGAAACAGAAGGAGGATCTGCAGCGGCAGCACGACCACCTCGAGGCGCAGAAGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR GCA 72 bp | TCATACTCTTTAAGCTCGTCCTCGGTGAATAACTGTTaGTGGTCCAGTGTCTCCCAGCTATCAGGCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SYSLSSSSVNNC*WSSVSQLSGSR Trigger: CCTGGAGCCTGATAGCTGGGAGACACTGGACCAGCAACAGTTATTCACCGAGGACGAGCTTAAAGAGTATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR GCA 72 bp | TTGTTGTTATCAATACTCCATGATCGGGCCTTGAGCTaGTCATGTTCCTTATGTCATCCAGTGAGGGATCGC | + |
|
Preference number: 3 (lower is better) Translates to: LLLSILHDRALS*SCSLCHPVRDR Trigger: GCGATCCCTCACTGGATGACATAAGGAACATGAGCAGCTCAAGGCCCGATCATGGAGTATTGATAACAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR TCA 72 bp | AGTCACCAATCGGTCTTTGTTGTTATCAATACTCCATaGTCGGGCCTTGAGCTGCTCATGTTCCTTATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SHQSVFVVINTP*SGLELLMFLMS Trigger: TGACATAAGGAACATGAGCAGCTCAAGGCCCGATCATGGAGTATTGATAACAACAAAGACCGATTGGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| 3UTR CCA 72 bp | TGCAGCTCTTCCGCCCTCTTCTTAAGCTCGTTCTCTTaGATAGCAATAATGCTTTCATACTCTTTAAGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: CSSSALFLSSFS*IAIMLSYSLSS Trigger: CGAGCTTAAAGAGTATGAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAGAAGAGGGCGGAAGAGCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| CDS-3UTR GCA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGGCCTCGAGGTGGTCGTaGTGCCGCTGCAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DEIDVESTVFFQVLADIRASRWS*CRCRSS Trigger: GGAGGATCTGCAGCGGCAGCACGACCACCTCGAGGC...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR GCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAGCCTCGAGGTGGTCGTaGTGCCGCTGCAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKASRWS*CRCRSS Trigger: GGAGGATCTGCAGCGGCAGCACGACCACCTCGAGGC...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| 3UTR CAA 72 bp | GCTCTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTaGTTGTTATCAATACTCCATGATCGGGCCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRNSSRVTNRS*LLSILHDRALS Trigger: GCTCAAGGCCCGATCATGGAGTATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| CDS-3UTR TCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTACTAAGTCCAGCTCTTaGCTCAGCCTCCCGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTTKSSS*LSLPLL Trigger: AAGGAGCGGGAGGCTGAGTCAAGAGCTGGACTTAGT...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR GCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTTCCTCCTTCTGTTTCTaGAGCTCTTCCGCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTSSFCF*SSSALF Trigger: GAAGAGGGCGGAAGAGCTGCAGAAACAGAAGGAGGA...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CCA 90 bp | TTAAGCTCGTCCTCGGTGAATAACTGTTGCTGGTCCAGTGTCTCCCAGCTATCAGTCCTCTGCATTTTGTaGGTTATACACTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSVNNCCWSSVSQLSVLCIL*VIHFLQ Trigger: TTGGAGAAAGTGTATAACCCACAAAATGCAGAGGAC...TGATAGCTGGGAGACACTGGACCAGCAACAGTTATTCACCGAGGACGAGCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| CDS-3UTR TCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAACTAAGTCCAGCTCTTaGCTCAGCCTCCCGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKTKSSS*LSLPLL Trigger: AAGGAGCGGGAGGCTGAGTCAAGAGCTGGACTTAGT...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR TCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTCGTGTTCTCTCATCCTaGGCCTCTCCTCTTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTRVLSS*ASPLPF Trigger: AAATGGAAGAGGAGAGGCTCAGGATGAGAGAACACG...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR GCA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGTCGGTGAATAACTGTTaGTGGTCCAGTGTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DEIDVESTVFFQVLADIRSVNNC*WSSVSQ Trigger: CTGGGAGACACTGGACCAGCAACAGTTATTCACCGA...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| 3UTR CAA 72 bp | CTGCAGCTCTTCCGCCCTCTTCTTAAGCTCGTTCTCTaGGATAGCAATAATGCTTTCATACTCTTTAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQLFRPLLKLVL*DSNNAFILFKL Trigger: GAGCTTAAAGAGTATGAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAGAAGAGGGCGGAAGAGCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGGATAGCAATAATGCTTTCATACTCTTTAAGCTCGTCCTCGGTGAATAACCGTGTTCTCTCATCCTaGGCCTCTCCTCTTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SWIAIMLSYSLSSSSVNNRVLSS*ASPLPF Trigger: AAATGGAAGAGGAGAGGCTCAGGATGAGAGAACACG...GTTATTCACCGAGGACGAGCTTAAAGAGTATGAAAGCATTATTGCTATCCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| CDS-3UTR TCA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGGGAGCAATGCCTTGTTaGAGTTTCTTCTGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DEIDVESTVFFQVLADIRGAMPC*SFFCSR Trigger: CCTGGAACAGAAGAAACTTCAACAAGGCATTGCTCC...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR GCA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGTGGTGGCTCTATCCTTaGATTTTCCACTGGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DEIDVESTVFFQVLADIRWWLYP*IFHWLS Trigger: ACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCA...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR GCA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGTTGGGGTGGTCTTCGTaGTTCCTCTTCATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DEIDVESTVFFQVLADIRLGWSS*FLFISS Trigger: TGAAGAGATGAAGAGGAAGCACGAAGACCACCCCAA...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR GCA 90 bp | AATCACTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATCCTCCTTCTGTTTCTaGAGCTCTTCCGCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHCTIMKAIMWYLRTVHPSSFCF*SSSALF Trigger: GAAGAGGGCGGAAGAGCTGCAGAAACAGAAGGAGGA...TGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAGTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CCA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGGTGAATAACTGTTGCTaGTCCAGTGTCTCCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: DEIDVESTVFFQVLADIRVNNCC*SSVSQL Trigger: TAGCTGGGAGACACTGGACCAGCAACAGTTATTCAC...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR TCA 90 bp | AATCACTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCACGTGTTCTCTCATCCTaGGCCTCTCCTCTTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NHCTIMKAIMWYLRTVHPRVLSS*ASPLPF Trigger: AAATGGAAGAGGAGAGGCTCAGGATGAGAGAACACG...TGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR GCA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGAGTCTTCCTACTTCTTaGCTCTTCAGCTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DEIDVESTVFFQVLADIRSLPTS*LFSSSS Trigger: ACTGGATGAGCTGAAGAGGCAAGAAGTAGGAAGACT...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR GCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAATCGGTGAATAACTGTTaGTGGTCCAGTGTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKSVNNC*WSSVSQ Trigger: CTGGGAGACACTGGACCAGCAACAGTTATTCACCGA...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTGTGTTAGGATTCTGGTaGTTCAGGTGTTCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTVLGFW*FRCSNC Trigger: GCAGTTTGAACACCTGAACCACCAGAATCCTAACAC...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR TCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTTCTGGAGCTTTTCTCTaGAATGTGGATCTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTSGAFL*NVDLFP Trigger: TGGAAACAGATCCACATTTCAGAGAAAAGCTCCAGA...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR TCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAGGAGCAATGCCTTGTTaGAGTTTCTTCTGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKGAMPC*SFFCSR Trigger: CCTGGAACAGAAGAAACTTCAACAAGGCATTGCTCC...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR GCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAATGGTGGCTCTATCCTTaGATTTTCCACTGGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKWWLYP*IFHWLS Trigger: ACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCA...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTCCTTGCATTTTCCACTaGCTCAGTGTTGTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTPCIFH*LSVVYF Trigger: AAAGTACACAACACTGAGCCAGTGGAAAATGCAAGG...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTAAGTCCAGTATCTGGTaGCTCTATCCTTGCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTKSSIW*LYPCIF Trigger: GAAAATGCAAGGATAGAGCCACCAGATACTGGACTT...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CCA 90 bp | AATCACTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCAGTGAATAACTGTTGCTaGTCCAGTGTCTCCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NHCTIMKAIMWYLRTVHPVNNCC*SSVSQL Trigger: TAGCTGGGAGACACTGGACCAGCAACAGTTATTCAC...TGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAGTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR GCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAAGTCTTCCTACTTCTTaGCTCTTCAGCTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKSLPTS*LFSSSS Trigger: ACTGGATGAGCTGAAGAGGCAAGAAGTAGGAAGACT...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTAATGTGTTAGGATTCTaGTGGTTCAGGTGTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTNVLGF*WFRCSN Trigger: GTTTGAACACCTGAACCACCAGAATCCTAACACATT...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTGTCCTCTGCATTTTGTaGGTTATACACTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTVLCIL*VIHFLQ Trigger: TTGGAGAAAGTGTATAACCCACAAAATGCAGAGGAC...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR TCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAATCTGGAGCTTTTCTCTaGAATGTGGATCTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKSGAFL*NVDLFP Trigger: TGGAAACAGATCCACATTTCAGAGAAAAGCTCCAGA...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR TCA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTTCTCCAACTCTCTTGTaGATAGTGCTTCTAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIDVESTVFFQVLADIRTSPTLL*IVLLIL Trigger: AAGAATTAGAAGCACTATTCACAAGAGAGTTGGAGA...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAACCTTGCATTTTCCACTaGCTCAGTGTTGTGTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKPCIFH*LSVVYF Trigger: AAAGTACACAACACTGAGCCAGTGGAAAATGCAAGG...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAAAGTCCAGTATCTGGTaGCTCTATCCTTGCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKKSSIW*LYPCIF Trigger: GAAAATGCAAGGATAGAGCCACCAGATACTGGACTT...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CCA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAAATGTGTTAGGATTCTaGTGGTTCAGGTGTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYHNEGNYVVFENCSPMKNVLGF*WFRCSN Trigger: GTTTGAACACCTGAACCACCAGAATCCTAACACATT...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CCA 90 bp | AATCACTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCAGTCCTCTGCATTTTGTaGGTTATACACTTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NHCTIMKAIMWYLRTVHPVLCIL*VIHFLQ Trigger: TTGGAGAAAGTGTATAACCCACAAAATGCAGAGGAC...TGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAGTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS GCA 90 bp | TGTGTGGCTCAAACTTCAGCTCTCCCGCTGGCCCTGATGGAGCAATaGCTTGTTGAAGTTTCTTCTGTTCCAGGTGCTGGACGGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CVAQTSALPLALMEQ*LVEVSSVPGAGRPD Trigger: ATCAGGCCGTCCAGCACCTGGAACAGAAGAAACTTCAACAAGGCATTGCTCCATCAGGGCCAGCGGGAGAGCTGAAGTTTGAGCCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS GCA 90 bp | TACGTGGCTCAAACTTCAGCTCTCCCGCTGGCCCTGATGGAGCAATaGCTTGTTGAAGTTTCTTCTGTTCCAGGTGCTGGACGGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YVAQTSALPLALMEQ*LVEVSSVPGAGRPD Trigger: ATCAGGCCGTCCAGCACCTGGAACAGAAGAAACTTCAACAAGGCATTGCTCCATCAGGGCCAGCGGGAGAGCTGAAGTTTGAGCCACGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS GCA 90 bp | GTCCAGCTCTTGACTCAGCCTCCCGCTCCTTATCTCCTCTATGTCTaGTTTCTGGAGCTTTTCTCTGAAATGTGGATCTGTTTCCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VQLLTQPPAPYLLYV*FLELFSEMWICFQD Trigger: GTCTTGGAAACAGATCCACATTTCAGAGAAAAGCTCCAGAAAGCAGACATAGAGGAGATAAGGAGCGGGAGGCTGAGTCAAGAGCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGCTGGTGGCTCTATCCTaGCATTTTCCACTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DEIDVESTVFFQVLADIRLVALS*HFPLAQ Trigger: CTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAG...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS GCA 90 bp | ATCATCTCGTACTTCTTAAACTCTTCATGCCGAGTCCGGTCATATTaGTCCAGATCCGCGGTAGCTGCTTTGATTAGCATATCCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: IISYFLNSSCRVRSY*SRSAVAALISISKS Trigger: AGATTTGGATATGCTAATCAAAGCAGCTACCGCGGATCTGGAGCAATATGACCGGACTCGGCATGAAGAGTTTAAGAAGTACGAGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTCAGTCTTCCTACTTCTaGCCTCTTCAGCTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EIDVESTVFFQVLADIRTQSSYF*PLQLIQ Trigger: CTGGATGAGCTGAAGAGGCAAGAAGTAGGAAGACTG...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CAA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGATTCATGCCAGTGTCTaGAAGGGCATCCAGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: DEIDVESTVFFQVLADIRIHASV*KGIQLS Trigger: GCTAAGCTGGATGCCCTTCAAGACACTGGCATGAAT...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTGTAGCTCTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTTGTTGTTATCGTCCTCTGCATTTaGTGGGTTATACACTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLCSSQEFLQSHQSVFVVIVLCI*WVIHFL Trigger: GAGAAAGTGTATAACCCACAAAATGCAGAGGACGAT...AACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAGAGCTACAGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183335.2 |
||
| CDS GCA 90 bp | GAGGTATTCATCATAATAAAGTCCAGTATCTGGTGGCTCTATCCTTaGATTTTCCACTGGCTCAGTGTTGTGTACTTTGGTCTTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EVFIIIKSSIWWLYP*IFHWLSVVYFGLVH Trigger: GTGGACAAGACCAAAGTACACAACACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGACTTTATTATGATGAATACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAACTGGTGGCTCTATCCTaGCATTTTCCACTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LYHNEGNYVVFENCSPMKLVALS*HFPLAQ Trigger: CTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAG...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAACAGTCTTCCTACTTCTaGCCTCTTCAGCTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LYHNEGNYVVFENCSPMKQSSYF*PLQLIQ Trigger: CTGGATGAGCTGAAGAGGCAAGAAGTAGGAAGACTG...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | AATCACTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCAATTCATGCCAGTGTCTaGAAGGGCATCCAGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NHCTIMKAIMWYLRTVHPIHASV*KGIQLS Trigger: GCTAAGCTGGATGCCCTTCAAGACACTGGCATGAAT...TGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGTCCGCGGTAGCTGCTTaGATTAGCATATCCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: DEIDVESTVFFQVLADIRSAVAA*ISISKS Trigger: AGATTTGGATATGCTAATCAAAGCAGCTACCGCGGA...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CAA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGTGGAGCAATGCCTTGTaGAAGTTTCTTCTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DEIDVESTVFFQVLADIRWSNAL*KFLLFQ Trigger: CTGGAACAGAAGAAACTTCAACAAGGCATTGCTCCA...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS CCA 90 bp | TTCAATCACTTGCTTGAGGTATTCATCATAATAAAGTCCAGTATCTaGTGGCTCTATCCTTGCATTTTCCACTGGCTCAGTGTTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FNHLLEVFIIIKSSI*WLYPCIFHWLSVVY Trigger: GTACACAACACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGACTTTATTATGATGAATACCTCAAGCAAGTGATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | GATGAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGAAAACAGTACTGTACTaGGATGATCCTCCACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DEIDVESTVFFQVLADIRKTVLY*DDPPPH Trigger: ATGAGGTGGAGGATCATCCAAGTACAGTACTGTTTT...CCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CAA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTATCGTCCTCTGCATTTaGTGGGTTATACACTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EIDVESTVFFQVLADIRTIVLCI*WVIHFL Trigger: GAGAAAGTGTATAACCCACAAAATGCAGAGGACGAT...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS CCA 90 bp | AATCACTTGCTTGAGGTATTCATCATAATAAAGTCCAGTATCTGGTaGCTCTATCCTTGCATTTTCCACTGGCTCAGTGTTGTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: NHLLEVFIIIKSSIW*LYPCIFHWLSVVYF Trigger: AAAGTACACAACACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGACTTTATTATGATGAATACCTCAAGCAAGTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | AATCACTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATCCGCGGTAGCTGCTTaGATTAGCATATCCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NHCTIMKAIMWYLRTVHPSAVAA*ISISKS Trigger: AGATTTGGATATGCTAATCAAAGCAGCTACCGCGGA...TGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAGTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTCTTAAGCTCGTTCTCTaGGATAGCAATAATGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EIDVESTVFFQVLADIRTLKLVL*DSNNAF Trigger: GAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAG...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CAA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAATGGAGCAATGCCTTGTaGAAGTTTCTTCTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LYHNEGNYVVFENCSPMKWSNAL*KFLLFQ Trigger: CTGGAACAGAAGAAACTTCAACAAGGCATTGCTCCA...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAAAAACAGTACTGTACTaGGATGATCCTCCACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LYHNEGNYVVFENCSPMKKTVLY*DDPPPH Trigger: ATGAGGTGGAGGATCATCCAAGTACAGTACTGTTTT...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | GAAATAGATGTTGAATCAACGGTTTTCTTCCAAGTTCTGGCAGACATCAGGACTCAAGACTTCAATCACTaGCTTGAGGTATTCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: EIDVESTVFFQVLADIRTQDFNH*LEVFII Trigger: TATGATGAATACCTCAAGCAAGTGATTGAAGTCTTG...AGTCCTGATGTCTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS-3UTR CAA 90 bp | CTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCATGAAAATCGTCCTCTGCATTTaGTGGGTTATACACTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LYHNEGNYVVFENCSPMKIVLCI*WVIHFL Trigger: GAGAAAGTGTATAACCCACAAAATGCAGAGGACGAT...TTTCATGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS-3UTR CAA 90 bp | AATCACTGTACCATAATGAAGGCAATTATGTGGTATTTGAGAACTGTTCACCCACTTAAGCTCGTTCTCTaGGATAGCAATAATGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NHCTIMKAIMWYLRTVHPLKLVL*DSNNAF Trigger: GAAAGCATTATTGCTATCCAAGAGAACGAGCTTAAG...TGGGTGAACAGTTCTCAAATACCACATAATTGCCTTCATTATGGTACAGTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS TCA 72 bp | TGTGTGTGGCTCAAACTTCAGCTCTCCCGCTGGCCCTaGTGGAGCAATGCCTTGTTGAAGTTTCTTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CVWLKLQLSRWP*WSNALLKFLLF Trigger: GAACAGAAGAAACTTCAACAAGGCATTGCTCCATCAGGGCCAGCGGGAGAGCTGAAGTTTGAGCCACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032895.15 |
||
| CDS TCA 72 bp | CATACGTGGCTCAAACTTCAGCTCTCCCGCTGGCCCTaGTGGAGCAATGCCTTGTTGAAGTTTCTTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HTWLKLQLSRWP*WSNALLKFLLF Trigger: GAACAGAAGAAACTTCAACAAGGCATTGCTCCATCAGGGCCAGCGGGAGAGCTGAAGTTTGAGCCACGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | GCATTTTCCACTGGCTCAGTGTTGTGTACTTTGGTCTaGTCCACATCGATAGGAACAGCTTCCAGAGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AFSTGSVLCTLV*STSIGTASRAV Trigger: GACCGCTCTGGAAGCTGTTCCTATCGATGTGGACAAGACCAAAGTACACAACACTGAGCCAGTGGAAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | CTGCTTCAGAAGAAGGTGGTGATTCATGCCAGTGTCTaGAAGGGCATCCAGCTTAGCTTTGATGAGCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: LLQKKVVIHASV*KGIQLSFDEHP Trigger: CGGATGCTCATCAAAGCTAAGCTGGATGCCCTTCAAGACACTGGCATGAATCACCACCTTCTTCTGAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 90 bp | GTGTTCAAACTGCTTCAGAAGAAGGTGGTGATTCATGCCAGTGTCTaGAAGGGCATCCAGCTTAGCTTTGATGAGCATCCGCAGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VFKLLQKKVVIHASV*KGIQLSFDEHPQSS Trigger: GGAAGACTGCGGATGCTCATCAAAGCTAAGCTGGATGCCCTTCAAGACACTGGCATGAATCACCACCTTCTTCTGAAGCAGTTTGAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS GCA 72 bp | TTAGCTTTGATGAGCATCCGCAGTCTTCCTACTTCTTaGCTCTTCAGCTCATCCAGTCTCGTCCTCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LALMSIRSLPTS*LFSSSSLVLTL Trigger: CAAAGTGAGGACGAGACTGGATGAGCTGAAGAGGCAAGAAGTAGGAAGACTGCGGATGCTCATCAAAGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | CTTAGCTTTGATGAGCATCCGCAGTCTTCCTACTTCTaGCCTCTTCAGCTCATCCAGTCTCGTCCTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSFDEHPQSSYF*PLQLIQSRPHF Trigger: AAAGTGAGGACGAGACTGGATGAGCTGAAGAGGCAAGAAGTAGGAAGACTGCGGATGCTCATCAAAGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 90 bp | TCTGTAGCTCTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTTGTaGTTATCAATCTCACTCATGACGTGTTCTCTCATCCTGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVALRNSSRVTNRSL*LSISLMTCSLILSL Trigger: GAGGCTCAGGATGAGAGAACACGTCATGAGTGAGATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAGAGCTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CCA 72 bp | TCCAGTATCTGGTGGCTCTATCCTTGCATTTTCCACTaGCTCAGTGTTGTGTACTTTGGTCTTGTCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: SSIWWLYPCIFH*LSVVYFGLVHI Trigger: GATGTGGACAAGACCAAAGTACACAACACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 90 bp | TCATGCCGAGTCCGGTCATATTGCTCCAGATCCGCGGTAGCTGCTTaGATTAGCATATCCAAATCTCTGGATTCAAATGTGTTAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: SCRVRSYCSRSAVAA*ISISKSLDSNVLGF Trigger: GAATCCTAACACATTTGAATCCAGAGATTTGGATATGCTAATCAAAGCAGCTACCGCGGATCTGGAGCAATATGACCGGACTCGGCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 90 bp | TTCTCTGTAGCTCTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTaGTTGTTATCAATCTCACTCATGACGTGTTCTCTCATCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSVALRNSSRVTNRS*LLSISLMTCSLILS Trigger: GCTCAGGATGAGAGAACACGTCATGAGTGAGATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAGAGCTACAGAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | ATCCTTGCATTTTCCACTGGCTCAGTGTTGTGTACTTaGGTCTTGTCCACATCGATAGGAACAGCTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILAFSTGSVLCT*VLSTSIGTASR Trigger: TCTGGAAGCTGTTCCTATCGATGTGGACAAGACCAAAGTACACAACACTGAGCCAGTGGAAAATGCAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | GTCCGGTCATATTGCTCCAGATCCGCGGTAGCTGCTTaGATTAGCATATCCAAATCTCTGGATTCAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VRSYCSRSAVAA*ISISKSLDSNV Trigger: CACATTTGAATCCAGAGATTTGGATATGCTAATCAAAGCAGCTACCGCGGATCTGGAGCAATATGACCGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | GCTCTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTaGTTGTTATCAATCTCACTCATGACGTGTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALRNSSRVTNRS*LLSISLMTCSL Trigger: GAGAGAACACGTCATGAGTGAGATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAGAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | CTCAGGAATTCCTCCAGAGTCACCAATCGGTCTTTGTaGTTATCAATCTCACTCATGACGTGTTCTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LRNSSRVTNRSL*LSISLMTCSLI Trigger: GATGAGAGAACACGTCATGAGTGAGATTGATAACAACAAAGACCGATTGGTGACTCTGGAGGAATTCCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 72 bp | CATCATAATAAAGTCCAGTATCTGGTGGCTCTATCCTaGCATTTTCCACTGGCTCAGTGTTGTGTACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HHNKVQYLVALS*HFPLAQCCVLW Trigger: CCAAAGTACACAACACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGACTTTATTATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS GCA 72 bp | ATCATAATAAAGTCCAGTATCTGGTGGCTCTATCCTTaGATTTTCCACTGGCTCAGTGTTGTGTACTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: IIIKSSIWWLYP*IFHWLSVVYFG Trigger: ACCAAAGTACACAACACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGACTTTATTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CCA 72 bp | CTTGAGGTATTCATCATAATAAAGTCCAGTATCTGGTaGCTCTATCCTTGCATTTTCCACTGGCTCAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LEVFIIIKSSIW*LYPCIFHWLSV Trigger: AACACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGACTTTATTATGATGAATACCTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CCA 72 bp | TTGCTTGAGGTATTCATCATAATAAAGTCCAGTATCTaGTGGCTCTATCCTTGCATTTTCCACTGGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLEVFIIIKSSI*WLYPCIFHWLS Trigger: ACTGAGCCAGTGGAAAATGCAAGGATAGAGCCACCAGATACTGGACTTTATTATGATGAATACCTCAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS CAA 90 bp | GAGCTTTTCTCTGAAATGTGGATCTGTTTCCAAGACTTCAATCACTaGCTTGAGGTATTCATCATAATAAAGTCCAGTATCTGGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELFSEMWICFQDFNH*LEVFIIIKSSIWWL Trigger: GAGCCACCAGATACTGGACTTTATTATGATGAATACCTCAAGCAAGTGATTGAAGTCTTGGAAACAGATCCACATTTCAGAGAAAAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||
| CDS TCA 72 bp | AATGTGGATCTGTTTCCAAGACTTCAATCACTTGCTTaGGGTATTCATCATAATAAAGTCCAGTATCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NVDLFPRLQSLA*GIHHNKVQYLV Trigger: CACCAGATACTGGACTTTATTATGATGAATACCTCAAGCAAGTGATTGAAGTCTTGGAAACAGATCCACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032895.15 ENSMUST00000183175.8 |
||