RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NUCB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030824

Ensembl transcript IDs: ENSMUST00000033096.16, ENSMUST00000209436.2, ENSMUST00000210449.2, ENSMUST00000211343.2, ENSMUST00000211682.2, ENSMUST00000211765.2

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCTCCTGGCAGGGAAAGTCATGTGCCCTAGGATACCAGGGAGGTaGGCAGGTGGCGTGCGTGCAGGCAGGGCTTGGAAGAGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: SLLAGKVMCPRIPGR*AGGVRAGRAWKRAG
Trigger: TCCTGCCCTCTTCCAAGCCCTGCCTGCACGCACGCCACCTGCTCACCTCCCTGGTATCCTAGGGCACATGACTTTCCCTGCCAGGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 90 bp GTTCTGCTCCCAGGAGGCCATGAGGGCGTTGGTCCCCAGGGAGGCTaGAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTG +
Preference number: 1 (lower is better)
Translates to: VLLPGGHEGVGPQGG*KATSSGFHTVCGNL
Trigger: CAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAGCCTCCCTGGGGACCAACGCCCTCATGGCCTCCTGGGAGCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR GCA 90 bp TGGAACAGAGAAGAGCAAAGTAGGCAGGTGGGCAGGCCTGGAGTGTaGACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACTTCAGCTCC +
Preference number: 1 (lower is better)
Translates to: WNREEQSRQVGRPGV*TPGEVSELSCNFSS
Trigger: GGAGCTGAAGTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCACCTGCCTACTTTGCTCTTCTCTGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR TCA 90 bp TCAGAGCACATGTTGAGACAGAACCTGTGGTTGAGGCTTGAATTGTaGTCCCAGGGTGTGGCCTGCTTCTGCCTCCCTGTTGCTGGGGTC +
Preference number: 1 (lower is better)
Translates to: SEHMLRQNLWLRLEL*SQGVACFCLPVAGV
Trigger: GACCCCAGCAACAGGGAGGCAGAAGCAGGCCACACCCTGGGATCACAATTCAAGCCTCAACCACAGGTTCTGTCTCAACATGTGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 90 bp GTGCAGGTCAGAGCACATGTTGAGACAGAACCTGTGGTTGAGGCTTaGATTGTGATCCCAGGGTGTGGCCTGCTTCTGCCTCCCTGTTGC +
Preference number: 1 (lower is better)
Translates to: VQVRAHVETEPVVEA*IVIPGCGLLLPPCC
Trigger: GCAACAGGGAGGCAGAAGCAGGCCACACCCTGGGATCACAATTCAAGCCTCAACCACAGGTTCTGTCTCAACATGTGCTCTGACCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 90 bp TGGGACATTTCCTGTAATCCTGGCGCTGTCGCGCTGCACACACTGTaGAGGTCAGAGCACATGTTGAGACAGAACCTGTGGTTGAGGCTT +
Preference number: 1 (lower is better)
Translates to: WDISCNPGAVALHTL*RSEHMLRQNLWLRL
Trigger: AAGCCTCAACCACAGGTTCTGTCTCAACATGTGCTCTGACCTGCACAGTGTGTGCAGCGCGACAGCGCCAGGATTACAGGAAATGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 90 bp GTTAATCAAATGAGTGTGAGTTTCAGTAACCTGGAGGCTAGGGTATaGTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCAC +
Preference number: 1 (lower is better)
Translates to: VNQMSVSFSNLEARV*CLFPRLAFALARAH
Trigger: GTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCCTAGCCTCCAGGTTACTGAAACTCACACTCATTTGATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 90 bp GCACACACTTTTAATCATAGGATGCAATTGGCAGGTAGATTTCAGTaGGTTGAAGGCCAGCCTGGTCCACAGAGTTCCAAGGTCGCTGGA +
Preference number: 1 (lower is better)
Translates to: AHTFNHRMQLAGRFQ*VEGQPGPQSSKVAG
Trigger: TCCAGCGACCTTGGAACTCTGTGGACCAGGCTGGCCTTCAACTCACTGAAATCTACCTGCCAATTGCATCCTATGATTAAAAGTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 90 bp AACTGTAACTCCGGCTCCTGGGGATCTGATGCCCTCTCTGAATTCTaGGGACTCCTGCATTCTTATGGCATACACACAAAAACACACACA +
Preference number: 1 (lower is better)
Translates to: NCNSGSWGSDALSEF*GLLHSYGIHTKTHT
Trigger: TGTGTGTGTTTTTGTGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATTCAGAGAGGGCATCAGATCCCCAGGAGCCGGAGTTACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 90 bp CTTAATGCAGGCAGGACTTGGTGGCACACACTTTTAATCATAGGATaGAATTGGCAGGTAGATTTCAGTGAGTTGAAGGCCAGCCTGGTC +
Preference number: 1 (lower is better)
Translates to: LNAGRTWWHTLLIIG*NWQVDFSELKASLV
Trigger: GACCAGGCTGGCCTTCAACTCACTGAAATCTACCTGCCAATTGCATCCTATGATTAAAAGTGTGTGCCACCAAGTCCTGCCTGCATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 90 bp GTTGGCTTTGAACTTATAACACAGCCTAGGATGACAATGAACTCCTaGTCTTCCTGCCTCTACCTCCCAAGCACTAGGATTACGGGCATT +
Preference number: 1 (lower is better)
Translates to: VGFELITQPRMTMNS*SSCLYLPSTRITGI
Trigger: AATGCCCGTAATCCTAGTGCTTGGGAGGTAGAGGCAGGAAGATCAGGAGTTCATTGTCATCCTAGGCTGTGTTATAAGTTCAAAGCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 90 bp GTGGACTGTGGGATACAGGGCCTCCGTCATGCTAGGCACACATTATaGCAACTGAGCCACAGACCCTTAATAATATATATTTTTAATTAT +
Preference number: 1 (lower is better)
Translates to: VDCGIQGLRHARHTL*QLSHRPLIIYIFNY
Trigger: ATAATTAAAAATATATATTATTAAGGGTCTGTGGCTCAGTTGGCATAATGTGTGCCTAGCATGACGGAGGCCCTGTATCCCACAGTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACGCTCCCAGGAGGCCATaGGGGCGTTGGTCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNAPRRP*GRWSPG
Trigger: CCCTGGGGACCAACGCCCTCATGGCCTCCTGGGAGC...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACGGCAGGCCTGGAGTGTaGACTCCAGGTGAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: GYAACSQGWHLHSRARTHGRPGV*TPGEVS
Trigger: GCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCC...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACCTTCCACACTGTCTGTaGGAACCTGAGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: GYAACSQGWHLHSRARTHLPHCL*EPEGWG
Trigger: ACCCCAGCCCTCAGGTTCCCACAGACAGTGTGGAAG...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCAGCTCCCAGGAGGCCATaGGGGCGTTGGTCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: PHILVASSHQKELRSLAPAPRRP*GRWSPG
Trigger: CCCTGGGGACCAACGCCCTCATGGCCTCCTGGGAGC...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp CCAATGGGACTTGAGTGGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGTCTCGGTGTGGCCTGCTTCTaGCTCCCTGTTGCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: PMGLEWEAAWACALGSSLGVACF*LPVAGV
Trigger: GACCCCAGCAACAGGGAGGCAGAAGCAGGCCACACC...GAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACGCTAGGCACACATTATaGCAACTGAGCCACAGACCC +
Preference number: 2 (lower is better)
Translates to: GYAACSQGWHLHSRARTHARHTL*QLSHRP
Trigger: GGGTCTGTGGCTCAGTTGGCATAATGTGTGCCTAGC...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACGCAAAACAAACAGAATaGGCCTTGGTGTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GYAACSQGWHLHSRARTHAKQTE*ALVWEE
Trigger: CTCCTCCCACACCAAGGCCCATTCTGTTTGTTTTGC...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACACTGTCTGTGGGAACCTaGGGGCTGGGGTCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTLSVGT*GLGSLR
Trigger: CCTCAGAGACCCCAGCCCTCAGGTTCCCACAGACAG...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGGCACTCCAGGTGAGGTaGGCGAGCTCTCCTGCAACT +
Preference number: 2 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRALQVR*ASSPAT
Trigger: AGTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGC...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp CCAATGGGACTTGAGTGGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGTCTCAGGAAGCAGAGAGGCTaGGCCTGGAACAGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: PMGLEWEAAWACALGSSLRKQRG*AWNREE
Trigger: CTCTTCTCTGTTCCAGGCTCAGCCTCTCTGCTTCCT...GAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGCTGTCTGTGGGAACCTaGGGGCTGGGGTCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: DTKPRSCDPVTLGTGSRELSVGT*GLGSLR
Trigger: CCTCAGAGACCCCAGCCCTCAGGTTCCCACAGACAG...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCAGAGGGAGGCAGAACCTaGACCCAGAGGCTGAGAGCA +
Preference number: 2 (lower is better)
Translates to: PHILVASSHQKELRSLAPEGGRT*TQRLRA
Trigger: TGCTCTCAGCCTCTGGGTCCAGGTTCTGCCTCCCTC...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCACTTCCACACTGTCTGTaGGAACCTGAGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: PHILVASSHQKELRSLAPLPHCL*EPEGWG
Trigger: ACCCCAGCCCTCAGGTTCCCACAGACAGTGTGGAAG...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACAAAAAGTCTGGATGTTaGTGCAGTCTGGAGTTGTCA +
Preference number: 2 (lower is better)
Translates to: GYAACSQGWHLHSRARTHKKSGC*CSLELS
Trigger: TGACAACTCCAGACTGCACCAACATCCAGACTTTTT...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 90 bp ACTTTTCCAACTGAGCCATCTCCATGGCCCCTAAACATGTCTGGCTaGAACTCAAAGGACCCACCCACATCTCTCAGCCTCCCTGCCTGG +
Preference number: 2 (lower is better)
Translates to: TFPTEPSPWPLNMSG*NSKDPPTSLSLPAW
Trigger: CCAGGCAGGGAGGCTGAGAGATGTGGGTGGGTCCTTTGAGTTCAAGCCAGACATGTTTAGGGGCCATGGAGATGGCTCAGTTGGAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGGGCAGGCCTGGAGTGTaGACTCCAGGTGAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRGRPGV*TPGEVS
Trigger: GCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCC...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGCAAGGCCACTTCATCTaGCTTCCACACTGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRQGHFI*LPHCLW
Trigger: CCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTG...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CAA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATaGGCTCCACAGAAGGCAGAGTCAGAGACACTAAGCCAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: PHILVASSHQKELRS*APQKAESETLSQGP
Trigger: AGGACCTTGGCTTAGTGTCTCTGACTCTGCCTTCTGTGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp CTGGAAAGGGACCTTTCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGAGCCGCATGGGCATGTaGTTTGGGGAGCAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: LERDLSDLGKVTCAVRSWSRMGM*FGEQSP
Trigger: GGGAGACTGCTCCCCAAAGCACATGCCCATGCGGCT...CCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGAAAGGTCCCTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp CTGGAAAGGGACCTTTCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGCAAGGTCGCTGGAGCTaGACAGTGACAGCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: LERDLSDLGKVTCAVRSWQGRWS*TVTACL
Trigger: GAGGCAGGCTGTCACTGTGCAGCTCCAGCGACCTTG...CCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGAAAGGTCCCTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGGCAGCGAGGCCCTTGTaGCAAGAGCACACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMAARPL*QEHTES
Trigger: GCTTTCTGTGTGCTCTTGCCACAAGGGCCTCGCTGC...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACAGATTCAAGATAATATaGAGAGTGGGAGATAAGGGA +
Preference number: 2 (lower is better)
Translates to: GYAACSQGWHLHSRARTHRFKII*RVGDKG
Trigger: TCCCTTATCTCCCACTCTCCATATTATCTTGAATCT...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGCCTGGACCCAGAGGCTaGGAGCAGAGAATGGTAGAC +
Preference number: 2 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRPGPRG*EQRMVD
Trigger: GTCTACCATTCTCTGCTCTCAGCCTCTGGGTCCAGG...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp CTGGAAAGGGACCTTTCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGGGAGTTAGGGTAGGCTaGTGGGGTGGTGGTAAAGGC +
Preference number: 2 (lower is better)
Translates to: LERDLSDLGKVTCAVRSWGVRVG*WGGGKG
Trigger: GCCTTTACCACCACCCCATCAGCCTACCCTAACTCC...CCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGAAAGGTCCCTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGTGAGCGAGCTCTCCTaGAACTTCAGCTCCTGTAGT +
Preference number: 2 (lower is better)
Translates to: DTKPRSCDPVTLGTGSREVSELS*NFSSCS
Trigger: ACTACAGGAGCTGAAGTTGCAGGAGAGCTCGCTCAC...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGGGTGAGCAGGTGGCGTaGGTGCAGGCAGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRGEQVA*VQAGLG
Trigger: TCCAAGCCCTGCCTGCACGCACGCCACCTGCTCACC...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp CTGGAAAGGGACCTTTCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGGCCTGGCAAGTCTCCTaGCAGGGAAAGTCATGTGCC +
Preference number: 2 (lower is better)
Translates to: LERDLSDLGKVTCAVRSWAWQVS*QGKSCA
Trigger: GGCACATGACTTTCCCTGCCAGGAGACTTGCCAGGC...CCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGAAAGGTCCCTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGTGTCCCCATCCAAGATaGGGACAAAGCACCACAGGT +
Preference number: 2 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMCPHPR*GQSTTG
Trigger: ACCTGTGGTGCTTTGTCCTCATCTTGGATGGGGACA...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGAGCCAGGGAAGTTGGTaGACCAATTTTCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRSQGSW*TNFQEP
Trigger: GGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCT...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACAGCCAGGGAAGTTGGTaGACCAATTTTCAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDSQGSW*TNFQEP
Trigger: GGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCT...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGTCCCAGGGTGTGGCCTaGTTCTGCCTCCCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRSQGVA*FCLPVA
Trigger: AGCAACAGGGAGGCAGAAGCAGGCCACACCCTGGGA...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGGTGGGAGATAAGGGATaGACAGCTCCTGTGACATCA +
Preference number: 2 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMVGDKG*TAPVTS
Trigger: TGATGTCACAGGAGCTGTGCATCCCTTATCTCCCAC...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACCAAGGCCACTTCATCTaGCTTCCACACTGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDQGHFI*LPHCLW
Trigger: CCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTG...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CAA 90 bp GATATTCACACAGATACACTAATGTTTATTTGTGCCGGGCTATATTaGGATGGAACTGGGGCACAGAGCAGGACACAGCAGTGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: DIHTDTLMFICAGLY*DGTGAQSRTQQCGL
Trigger: CAGGCCACACTGCTGTGTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAGTGTATCTGTGTGAATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp CTGGAAAGGGACCTTTCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGGAGACTTGGTCTGGGTaGAGCTGTTTATGCCCTTAT +
Preference number: 2 (lower is better)
Translates to: LERDLSDLGKVTCAVRSWETWSG*SCLCPY
Trigger: ATAAGGGCATAAACAGCTGCACCCAGACCAAGTCTC...CCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGAAAGGTCCCTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGCTGGGATTAAAGGCATaGACCACCTGTAGCTATTGT +
Preference number: 2 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMLGLKA*TTCSYC
Trigger: ACAATAGCTACAGGTGGTGCATGCCTTTAATCCCAG...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp CTGGAAAGGGACCTTTCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGAACCACAGCTTCAGGTaGTCTTGGGAGATTCAAGAT +
Preference number: 2 (lower is better)
Translates to: LERDLSDLGKVTCAVRSWNHSFR*SWEIQD
Trigger: ATCTTGAATCTCCCAAGATCACCTGAAGCTGTGGTT...CCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGAAAGGTCCCTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGAATTCTGCGGACTCCTaGATTCTTATGGCATACACA +
Preference number: 2 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMNSADS*ILMAYT
Trigger: TGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATT...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGGAGTGGGAAGCCGCATaGGCATGTGCTTTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: TLNCLFFIIKEWAIIIAREWEAA*ACALGS
Trigger: GCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTC...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGAAACCTGCCTGCCTCTaGCTCCCGAGTGCTGGGATT +
Preference number: 2 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARKPACL*LPSAGI
Trigger: AATCCCAGCACTCGGGAGGCAGAGGCAGGCAGGTTT...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGAGCAAAGTAGGCAGGTaGGCAGGCCTGGAGTGTGCA +
Preference number: 2 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARSKVGR*AGLECA
Trigger: TGCACACTCCAGGCCTGCCCACCTGCCTACTTTGCT...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR TCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGAATTTTCAGGAGCCCTaGGCAGGGTTGGACCTCAGC +
Preference number: 2 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARNFQEP*AGLDLS
Trigger: GCTGAGGTCCAACCCTGCTCAGGGCTCCTGAAAATT...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR GCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGGTGAGCGAGCTCTCCTaGAACTTCAGCTCCTGTAGT +
Preference number: 2 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARVSELS*NFSSCS
Trigger: ACTACAGGAGCTGAAGTTGCAGGAGAGCTCGCTCAC...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGCAGAAGATAGGAGACTaGGACATTTCCTGTAATCCT +
Preference number: 2 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARQKIGD*DISCNP
Trigger: AGGATTACAGGAAATGTCCCAGTCTCCTATCTTCTG...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 90 bp TTTATTGTTTTGTTTTTCTCTCTAAATCACGTATGTGGTGCCATCTaGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACC +
Preference number: 2 (lower is better)
Translates to: FIVLFFSLNHVCGAI*GNKNIFTQKPWLLT
Trigger: GGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGCACCACATACGTGATTTAGAGAGAAAAACAAAACAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACGAGGCCATGAGGGCGTaGGTCCCCAGGGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNEAMRA*VPREAA
Trigger: TGCAGCCTCCCTGGGGACCAACGCCCTCATGGCCTC...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR TCA 72 bp GCAGGGAAAGTCATGTGCCCTAGGATACCAGGGAGGTaGGCAGGTGGCGTGCGTGCAGGCAGGGCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: AGKVMCPRIPGR*AGGVRAGRAWK
Trigger: CTTCCAAGCCCTGCCTGCACGCACGCCACCTGCTCACCTCCCTGGTATCCTAGGGCACATGACTTTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp CCAGGAGGCCATGAGGGCGTTGGTCCCCAGGGAGGCTaGAAGGCCACTTCATCTGGCTTCCACACTGTCTGT +
Preference number: 3 (lower is better)
Translates to: PGGHEGVGPQGG*KATSSGFHTVC
Trigger: ACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAGCCTCCCTGGGGACCAACGCCCTCATGGCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CCA 72 bp ACCTGGAGGCTAGGGTATGCTGCCTGTTCCCAAGGCTaGCATTTGCACTCGCGCGCGCGCACACACACACAC +
Preference number: 3 (lower is better)
Translates to: TWRLGYAACSQG*HLHSRARTHTH
Trigger: GTGTGTGTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCCTAGCCTCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp TGGCCACGGGAGGCCTCAAGACCAATGGGACTTGAGTaGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: WPREASRPMGLE*EAAWACALGSS
Trigger: ACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGGTCTTGAGGCCTCCCGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp AGGTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTaGGCGAGCTCTCCTGCAACTTCAGCTCCTGTAGTT +
Preference number: 3 (lower is better)
Translates to: RWAGLECALQVR*ASSPATSAPVV
Trigger: AACTACAGGAGCTGAAGTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR GCA 72 bp CCAGGTTGGCCTCGAACTCAGAAACCTGCCTGCCTCTaGCTCCCGAGTGCTGGGATTAAAGGCATGCACCAC +
Preference number: 3 (lower is better)
Translates to: PGWPRTQKPACL*LPSAGIKGMHH
Trigger: GTGGTGCATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGGTTTCTGAGTTCGAGGCCAACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGAGGCCATGAGGGCGTaGGTCCCCAGGGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: DTKPRSCDPVTLGTGSREEAMRA*VPREAA
Trigger: TGCAGCCTCCCTGGGGACCAACGCCCTCATGGCCTC...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACAGGTCAGAGCACATGTaGAGACAGAACCTGTGGTTG +
Preference number: 3 (lower is better)
Translates to: GYAACSQGWHLHSRARTHRSEHM*RQNLWL
Trigger: CAACCACAGGTTCTGTCTCAACATGTGCTCTGACCT...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp GGCAAGAGCACACAGAAAGCCGCCTGGCAAGTCTCCTaGCAGGGAAAGTCATGTGCCCTAGGATACCAGGGA +
Preference number: 3 (lower is better)
Translates to: GKSTQKAAWQVS*QGKSCALGYQG
Trigger: TCCCTGGTATCCTAGGGCACATGACTTTCCCTGCCAGGAGACTTGCCAGGCGGCTTTCTGTGTGCTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp GCCTCAAGACCAATGGGACTTGAGTGGGAAGCCGCATaGGCATGTGCTTTGGGGAGCAGTCTCCCACTGACA +
Preference number: 3 (lower is better)
Translates to: ASRPMGLEWEAA*ACALGSSLPLT
Trigger: TGTCAGTGGGAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGGTCTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp TCCTGTAATCCTGGCGCTGTCGCGCTGCACACACTGTaGAGGTCAGAGCACATGTTGAGACAGAACCTGTGG +
Preference number: 3 (lower is better)
Translates to: SCNPGAVALHTL*RSEHMLRQNLW
Trigger: CCACAGGTTCTGTCTCAACATGTGCTCTGACCTGCACAGTGTGTGCAGCGCGACAGCGCCAGGATTACAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp CCAGCCTGGTCCACAGAGTTCCAAGGTCGCTGGAGCTaGACAGTGACAGCCTGCCTCGGAAAACAAAAAGCA +
Preference number: 3 (lower is better)
Translates to: PAWSTEFQGRWS*TVTACLGKQKA
Trigger: TGCTTTTTGTTTTCCGAGGCAGGCTGTCACTGTGCAGCTCCAGCGACCTTGGAACTCTGTGGACCAGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp AAAGCACCACAGGTAGCCACCATCCTGGTGTTCTCATaGCCACGGGAGGCCTCAAGACCAATGGGACTTGAG +
Preference number: 3 (lower is better)
Translates to: KAPQVATILVFS*PREASRPMGLE
Trigger: CTCAAGTCCCATTGGTCTTGAGGCCTCCCGTGGCCATGAGAACACCAGGATGGTGGCTACCTGTGGTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp TGTTCCCATGGCAAAAATGAAGCAGCGAGGCCCTTGTaGCAAGAGCACACAGAAAGCCGCCTGGCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: CSHGKNEAARPL*QEHTESRLASL
Trigger: GAGACTTGCCAGGCGGCTTTCTGTGTGCTCTTGCCACAAGGGCCTCGCTGCTTCATTTTTGCCATGGGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp CTGAGCTCCTCATGCCTGCACGAGCACTTTTCCAACTaGGCCATCTCCATGGCCCCTAAACATGTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: LSSSCLHEHFSN*AISMAPKHVWL
Trigger: AAGCCAGACATGTTTAGGGGCCATGGAGATGGCTCAGTTGGAAAAGTGCTCGTGCAGGCATGAGGAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp CCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTaGGATCATTGGCTCCACAGAAGGCAGAGTCAGAGA +
Preference number: 3 (lower is better)
Translates to: PTSWWPLATKRN*DHWLHRRQSQR
Trigger: TCTCTGACTCTGCCTTCTGTGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR TCA 72 bp AGAGCACATGTTGAGACAGAACCTGTGGTTGAGGCTTaGATTGTGATCCCAGGGTGTGGCCTGCTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: RAHVETEPVVEA*IVIPGCGLLLP
Trigger: AGGCAGAAGCAGGCCACACCCTGGGATCACAATTCAAGCCTCAACCACAGGTTCTGTCTCAACATGTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp GGGATGCACAGCTCCTGTGACATCAACGTGATGTGGTaGGACTTGGTCTGGGTGCAGCTGTTTATGCCCTTA +
Preference number: 3 (lower is better)
Translates to: GMHSSCDINVMW*DLVWVQLFMPL
Trigger: TAAGGGCATAAACAGCTGCACCCAGACCAAGTCTCACCACATCACGTTGATGTCACAGGAGCTGTGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp GCCTGCACGAGCACTTTTCCAACTGAGCCATCTCCATaGCCCCTAAACATGTCTGGCTTGAACTCAAAGGAC +
Preference number: 3 (lower is better)
Translates to: ACTSTFPTEPSP*PLNMSGLNSKD
Trigger: GTCCTTTGAGTTCAAGCCAGACATGTTTAGGGGCCATGGAGATGGCTCAGTTGGAAAAGTGCTCGTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp CCTCCTAATTTCTTCAGAGACTGTCCCCATCCAAGATaGGGACAAAGCACCACAGGTAGCCACCATCCTGGT +
Preference number: 3 (lower is better)
Translates to: PPNFFRDCPHPR*GQSTTGSHHPG
Trigger: ACCAGGATGGTGGCTACCTGTGGTGCTTTGTCCTCATCTTGGATGGGGACAGTCTCTGAAGAAATTAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp TCCGGCTCCTGGGGATCTGATGCCCTCTCTGAATTCTaGGGACTCCTGCATTCTTATGGCATACACACAAAA +
Preference number: 3 (lower is better)
Translates to: SGSWGSDALSEF*GLLHSYGIHTK
Trigger: TTTTGTGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATTCAGAGAGGGCATCAGATCCCCAGGAGCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGCTAAACATGTCTGGCTaGAACTCAAAGGACCCACCC +
Preference number: 3 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMLNMSG*NSKDPP
Trigger: GGGTGGGTCCTTTGAGTTCAAGCCAGACATGTTTAG...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp AGCTGGCGGGATGACTCAGTAGTTAAGAACATGTGCTaGTCCTACAGAGAACCTGCATTTGGTTTCCAGCGT +
Preference number: 3 (lower is better)
Translates to: SWRDDSVVKNMC*SYREPAFGFQR
Trigger: ACGCTGGAAACCAAATGCAGGTTCTCTGTAGGAGCAGCACATGTTCTTAACTACTGAGTCATCCCGCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp GACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGTaGAGTTTTACAGCTGGCCACAGCTGTCTGGGAACA +
Preference number: 3 (lower is better)
Translates to: DLGKVTCAVRSW*SFTAGHSCLGT
Trigger: TGTTCCCAGACAGCTGTGGCCAGCTGTAAAACTGCACCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTaGGGCACAGAGCAGGACACAGCAGTGTGGCCTGAA +
Preference number: 3 (lower is better)
Translates to: NVYLCRAIFGWN*GTEQDTAVWPE
Trigger: TTCAGGCCACACTGCTGTGTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CCA 72 bp TCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTaGTGCAGTTTTACAGCTGGCCACAGCTGTCTGGGA +
Preference number: 3 (lower is better)
Translates to: SDLGKVTCAVRS*CSFTAGHSCLG
Trigger: TCCCAGACAGCTGTGGCCAGCTGTAAAACTGCACCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp TTTCAAGCCGTGGCATTACAGGAGAGGATAAAGGAATaGCGCCCTCAAACCTGTAACATTTCTTCAGACGGG +
Preference number: 3 (lower is better)
Translates to: FQAVALQERIKE*RPQTCNISSDG
Trigger: CCCGTCTGAAGAAATGTTACAGGTTTGAGGGCGGCATTCCTTTATCCTCTCCTGTAATGCCACGGCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp TACACTAATGTTTATTTGTGCCGGGCTATATTTGGATaGAACTGGGGCACAGAGCAGGACACAGCAGTGTGG +
Preference number: 3 (lower is better)
Translates to: YTNVYLCRAIFG*NWGTEQDTAVW
Trigger: CCACACTGCTGTGTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACAAGGAATTGAGATCATaGGCTCCACAGAAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDKELRS*APQKAE
Trigger: CTCTGCCTTCTGTGGAGCCAATGATCTCAATTCCTT...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp TCTCTGAATTCTGCGGACTCCTGCATTCTTATGGCATACACACAAAAACACACAGTAGATTTCAGTGAGTaGAAGGCCAGCCTGGTCCAC +
Preference number: 3 (lower is better)
Translates to: SLNSADSCILMAYTQKHTVDFSE*KASLVH
Trigger: GTGGACCAGGCTGGCCTTCAACTCACTGAAATCTAC...TGTGTGTTTTTGTGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATTCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp ACAGCTTCAGGTGATCTTGGGAGATTCAAGATAATATaGAGAGTGGGAGATAAGGGATGCACAGCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: TASGDLGRFKII*RVGDKGCTAPV
Trigger: CACAGGAGCTGTGCATCCCTTATCTCCCACTCTCCATATTATCTTGAATCTCCCAAGATCACCTGAAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp GAACTTATAACACAGCCTAGGATGACAATGAACTCCTaGTCTTCCTGCCTCTACCTCCCAAGCACTAGGATT +
Preference number: 3 (lower is better)
Translates to: ELITQPRMTMNS*SSCLYLPSTRI
Trigger: AATCCTAGTGCTTGGGAGGTAGAGGCAGGAAGATCAGGAGTTCATTGTCATCCTAGGCTGTGTTATAAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp TTGGTCTGGGTGCAGCTGTTTATGCCCTTATGTAAATaGAGGCCTCCTAATTTCTTCAGAGACTGTCCCCAT +
Preference number: 3 (lower is better)
Translates to: LVWVQLFMPLCK*RPPNFFRDCPH
Trigger: ATGGGGACAGTCTCTGAAGAAATTAGGAGGCCTTCATTTACATAAGGGCATAAACAGCTGCACCCAGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR TCA 72 bp TTTAATCATAGGATGCAATTGGCAGGTAGATTTCAGTaGGTTGAAGGCCAGCCTGGTCCACAGAGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: FNHRMQLAGRFQ*VEGQPGPQSSK
Trigger: CTTGGAACTCTGTGGACCAGGCTGGCCTTCAACTCACTGAAATCTACCTGCCAATTGCATCCTATGATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp GGGATACAGGGCCTCCGTCATGCTAGGCACACATTATaGCAACTGAGCCACAGACCCTTAATAATATATATT +
Preference number: 3 (lower is better)
Translates to: GIQGLRHARHTL*QLSHRPLIIYI
Trigger: AATATATATTATTAAGGGTCTGTGGCTCAGTTGGCATAATGTGTGCCTAGCATGACGGAGGCCCTGTATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGAGAGCTGATAGCTACTaGAAGAACACCCCACATCCT +
Preference number: 3 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRRADSY*KNTPHP
Trigger: AGGATGTGGGGTGTTCTTCAAGTAGCTATCAGCTCT...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR GCA 72 bp GCAGGATATTCACACAGATACACTAATGTTTATTTGTaGCGGGCTATATTTGGATGGAACTGGGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: AGYSHRYTNVYL*RAIFGWNWGTE
Trigger: CTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAGTGTATCTGTGTGAATATCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp GAAGCTGGTGCAGTTTTACAGCTGGCCACAGCTGTCTaGGAACACTTAATTGTCTCTTTTTCATCATCAAAG +
Preference number: 3 (lower is better)
Translates to: EAGAVLQLATAV*EHLIVSFSSSK
Trigger: CTTTGATGATGAAAAAGAGACAATTAAGTGTTCCCAGACAGCTGTGGCCAGCTGTAAAACTGCACCAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGTGGTGCAGTCTGGAGTaGTCACAGCTATGTGGGATC +
Preference number: 3 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARWCSLE*SQLCGI
Trigger: GATCCCACATAGCTGTGACAACTCCAGACTGCACCA...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR-3UTR CAA 90 bp TCTCTGAATTCTGCGGACTCCTGCATTCTTATGGCATACACACAAAAACACACATACACTAATGTTTATTaGTGCCGGGCTATATTTGGA +
Preference number: 3 (lower is better)
Translates to: SLNSADSCILMAYTQKHTYTNVY*CRAIFG
Trigger: TCCAAATATAGCCCGGCACAAATAAACATTAGTGTA...TGTGTGTTTTTGTGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATTCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CCA 72 bp GGAACACTTAATTGTCTCTTTTTCATCATCAAAGAGTaGGCTATTATCATTGCAAGGGTATTGGCTTATTTT +
Preference number: 3 (lower is better)
Translates to: GTLNCLFFIIKE*AIIIARVLAYF
Trigger: AAAATAAGCCAATACCCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGTTCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACGCCTCCAGGCGGTCCTaGGAGCGCCCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GYAACSQGWHLHSRARTHASRRS*ERPRAS
Trigger: AGAGGCCCTGGGGCGCTCCCAGGACCGCCTGGAGGC...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACCCGAACTCCTTCCTCTaGGTGGATGCCAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNPNSFL*VDARNS
Trigger: GGAGTTCCTGGCATCCACCCAGAGGAAGGAGTTCGG...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACTTTCTGGTCACCTGCTaGAGCTGGGACAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: GYAACSQGWHLHSRARTHFLVTC*SWDRSV
Trigger: GACGCTCCTGTCCCAGCTCCAGCAGGTGACCAGAAA...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGCCTCTGTCTCCTGGCTaGGGCGCTGGGCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRPLSPG*GAGPWH
Trigger: ATGCCAGGGCCCAGCGCCTCAGCCAGGAGACAGAGG...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCATCGGCCTCCTTCCGCTaGTCCTCTCCCAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPSASFR*SSPRDS
Trigger: GGAGTCTCTGGGAGAGGAGCAGCGGAAGGAGGCCGA...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACTGCAGAACAGCCTGCTaGAGCTCTCTCTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNCRTAC*SSLFCA
Trigger: GGCACAGAAGAGAGAGCTGCAGCAGGCTGTTCTGCA...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CCAATGGGACTTGAGTGGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGTCTCTGTCCGGGGTCTCAGTaGCCTGGCTGTCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PMGLEWEAAWACALGSSLCPGSQ*PGCPPE
Trigger: CTCAGGAGGACAGCCAGGCCACTGAGACCCCGGACA...GAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 72 bp AGGCTAGGGTATGCTGCCTGTTCCCAAGGCTGGCATTaGCACTCGCGCGCGCGCACACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: RLGYAACSQGWH*HSRARTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCCTAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCATCAGCGTTGGCAGCCTaGAGCTTCTCCCGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPSALAA*SFSRKC
Trigger: GCACTTCCGGGAGAAGCTGCAGGCTGCCAACGCTGA...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACGTTGGGCTCCTGCTTTaGATCCATCTTGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNVGLLL*IHLGLE
Trigger: CTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAAC...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCATCTCGGGTGGCCGTCTaGATCAGCAGCTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPSRVAV*ISSSRS
Trigger: GGACCTAGAGCTGCTGATCCAGACGGCCACCCGAGA...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGCTGCGCTGTTGCTCTTaGAGCTTCCTCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWLRCCS*SFLSAS
Trigger: GGAGGCCGAGAGGAAGCTCCAAGAGCAACAGCGCAG...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACGCATCTCGTAGCGTTTaGACTCTTCATGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GYAACSQGWHLHSRARTHASRSV*TLHGVQ
Trigger: CTGCACACCATGAAGAGTTCAAACGCTACGAGATGC...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACTTCATGTGGTCCACCTaGAAGTTGGGCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GYAACSQGWHLHSRARTHFMWST*KLGSCF
Trigger: AAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAA...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCACGGTGTCTGCGCTGTTaGTCTTGGAGCTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPRCLRC*SWSFLS
Trigger: CGAGAGGAAGCTCCAAGAGCAACAGCGCAGACACCG...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp CCAATGGGACTTGAGTGGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGTCTCCTTCCTCTGGGTGGATaGCAGGAACTCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PMGLEWEAAWACALGSSLLPLGG*QELLQG
Trigger: ACCCTGGAGGAGTTCCTGGCATCCACCCAGAGGAAG...GAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGTGTCCGGGGTCTCAGTaGCCTGGCTGTCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRCPGSQ*PGCPPE
Trigger: CTCAGGAGGACAGCCAGGCCACTGAGACCCCGGACA...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACGCCTCCAGGCGGTCCTaGGAGCGCCCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDASRRS*ERPRAS
Trigger: AGAGGCCCTGGGGCGCTCCCAGGACCGCCTGGAGGC...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGTTTCTGGTCACCTGCTaGAGCTGGGACAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWFLVTC*SWDRSV
Trigger: GACGCTCCTGTCCCAGCTCCAGCAGGTGACCAGAAA...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCAACACCTCCTGTCGCTTaGGCTCATCCAGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPTPPVA*AHPAWF
Trigger: GAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGT...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACATCGGCCTCCTTCCGCTaGTCCTCTCCCAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTSASFR*SSPRDS
Trigger: GGAGTCTCTGGGAGAGGAGCAGCGGAAGGAGGCCGA...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCAACTCCTTCCTCTGGGTaGATGCCAGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPTPSSG*MPGTPP
Trigger: TGGAGGAGTTCCTGGCATCCACCCAGAGGAAGGAGT...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCACTGGGAATCCAGCTGTaGCAGCTCAGGGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKELRSLAPLGIQL*QLRGLL
Trigger: GAGCAGCCCCCTGAGCTGCCACAGCTGGATTCCCAG...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp GGGTATGCTGCCTGTTCCCAAGGCTGGCATTTGCACTCGCGCGCGCGCACACACAGAGCTTCCAGTTCTTaGTCATCTAGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: GYAACSQGWHLHSRARTHRASSS*SSRTPS
Trigger: TGATGGTGTCCTAGATGAGCAAGAACTGGAAGCTCT...GTGTGTGCGCGCGCGCGAGTGCAAATGCCAGCCTTGGGAACAGGCAGCATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCACAGCTCTCTCTTCTGTaGCTCCAGGCGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKELRSLAPQLSLL*LQAVLG
Trigger: TCCCAGGACCGCCTGGAGGCACAGAAGAGAGAGCTG...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCAGTCACAAGCCGGTCCTaGTTGGTGTCCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPVTSRS*LVSTFF
Trigger: GAAGAATGTGGACACCAACCAGGACCGGCTTGTGAC...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACATTCGGACGTTGTGGCTaGCGAAGTCCAGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTFGRCG*RSPALG
Trigger: GCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAA...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACACTTCCTCTGGGTGGATaGCAGGAACTCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTLPLGG*QELLQG
Trigger: ACCCTGGAGGAGTTCCTGGCATCCACCCAGAGGAAG...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGCTCTGCTCCATCTGCTaGAGCTCTCTCTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRLCSIC*SSLFCA
Trigger: GGCACAGAAGAGAGAGCTGCAGCAGATGGAGCAGAG...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS-3UTR GCA 90 bp CCAATGGGACTTGAGTGGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGTCTCTGTTCTTGCAGTTGCTaGTTCCTCTGCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: PMGLEWEAAWACALGSSLCSCSC*FLCSIC
Trigger: GCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACA...GAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGCTCTGTTCTTGCAGTTaGTGCTTCCTCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWLCSCS*CFLCSI
Trigger: GATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAG...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGTCCTTCAACTGGGCTTaGCTGCCAGGAACATTGACT +
Preference number: 4 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWSFNWA*LPGTLT
Trigger: AGTCAATGTTCCTGGCAGCCAAGCCCAGTTGAAGGA...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCACCGAACTCCTTCCTCTaGGTGGATGCCAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKELRSLAPPNSFL*VDARNS
Trigger: GGAGTTCCTGGCATCCACCCAGAGGAAGGAGTTCGG...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGTCCTGGCTGAGGCGCTaGGCCCTGGCATTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMSWLRR*ALAFSS
Trigger: TGAGCTGAATGCCAGGGCCCAGCGCCTCAGCCAGGA...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACAGTCACCTGCTGGAGCTaGGACAGGAGCGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTVTCWS*DRSVIC
Trigger: ACAGATGACGCTCCTGTCCCAGCTCCAGCAGGTGAC...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CAA 72 bp AGCAGGACACAGCAGTGTGGCCTGAAGCCAGGGAAGTaGGTGAACCAATTTTCAGGAGCCCTGAGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SRTQQCGLKPGK*VNQFSGALSRV
Trigger: AACCCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACACTGCTGTGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCAAACGTGTGCTGGTTCTaGGGGTCCAGGTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKELRSLAPNVCWF*GSRCSN
Trigger: GTTTGAGCACCTGGACCCTCAGAACCAGCACACGTT...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGCAGCTCTCTCTTCTGTaGCTCCAGGCGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMQLSLL*LQAVLG
Trigger: TCCCAGGACCGCCTGGAGGCACAGAAGAGAGAGCTG...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCAGGAGCGCTCTGTTCTTaGAGTTGCTGCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKELRSLAPGALCS*SCCFLC
Trigger: GCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCC...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGTCTCGGGTGGCCGTCTaGATCAGCAGCTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMSRVAV*ISSSRS
Trigger: GGACCTAGAGCTGCTGATCCAGACGGCCACCCGAGA...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGCGTTTGAACTCTTCATaGTGTGCAGCGTCATACTGG +
Preference number: 4 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWRLNSS*CAASYW
Trigger: CCAGTATGACGCTGCACACCATGAAGAGTTCAAACG...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACAACTCCTTCCTCTGGGTaGATGCCAGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTTPSSG*MPGTPP
Trigger: TGGAGGAGTTCCTGGCATCCACCCAGAGGAAGGAGT...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGTCCTGGCTGAGGCGCTaGGCCCTGGCATTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRSWLRR*ALAFSS
Trigger: TGAGCTGAATGCCAGGGCCCAGCGCCTCAGCCAGGA...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CAA 72 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATaGAGATCATTGGCTCCACAGAAGGCAGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKE*RSLAPQKAESE
Trigger: CTCTGACTCTGCCTTCTGTGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACCATCCATCTTGGCCTTaGGCAGCATCCGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDHPSWP*AASAAS
Trigger: CGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATG...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp GCAGGGCTTGGAAGAGGGCAGGATATTCACACAGATACACTAATGTTTATTTGTCCTCTGTCTCCTGGCTaGGGCGCTGGGCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGLGRGQDIHTDTLMFICPLSPG*GAGPWH
Trigger: ATGCCAGGGCCCAGCGCCTCAGCCAGGAGACAGAGG...ACAAATAAACATTAGTGTATCTGTGTGAATATCCTGCCCTCTTCCAAGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGTCCAGGTGCTCAAACTaGTTCAGGAGGTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRSRCSN*FRRFMW
Trigger: CCACATGAACCTCCTGAAGCAGTTTGAGCACCTGGA...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGAGAGCTTCCAGTTCTTaGTCATCTAGGACACCATCA +
Preference number: 4 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWRASSS*SSRTPS
Trigger: TGATGGTGTCCTAGATGAGCAAGAACTGGAAGCTCT...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCAACATTCTTCATCACGTaGTCCCGCATGCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKELRSLAPTFFIT*SRMRSR
Trigger: ACGGCTTCGCATGCGGGAGCACGTGATGAAGAATGT...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGCTGCGCTGTTGCTCTTaGAGCTTCCTCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRLRCCS*SFLSAS
Trigger: GGAGGCCGAGAGGAAGCTCCAAGAGCAACAGCGCAG...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACGGCTGCCAGGAACATTaGCTTTGGGGTGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDGCQEH*LWGVPG
Trigger: ACCGGGAACACCCCAAAGTCAATGTTCCTGGCAGCC...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGGGAGCGCTCTGTTCTTaGAGTTGCTGCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMGALCS*SCCFLC
Trigger: GCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCC...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGACGAAGTCCAGCTCTTaGCTCAGCTTTCCACTCTTA +
Preference number: 4 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRTKSSS*LSFPLL
Trigger: TAAGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGT...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGTCACAAGCCGGTCCTaGTTGGTGTCCACATTCTTC +
Preference number: 4 (lower is better)
Translates to: DTKPRSCDPVTLGTGSREVTSRS*LVSTFF
Trigger: GAAGAATGTGGACACCAACCAGGACCGGCTTGTGAC...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACGTCACCTGCTGGAGCTaGGACAGGAGCGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDVTCWS*DRSVIC
Trigger: ACAGATGACGCTCCTGTCCCAGCTCCAGCAGGTGAC...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACCTCAGGGGGCTGCTCTaGGACCTTCTTCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDLRGLL*DLLLRS
Trigger: GCTTCTGAGAAGAAGGTCCCAGAGCAGCCCCCTGAG...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACACCTCCTGTCGCTTaGGCTCATCCAGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRTPPVA*AHPAWF
Trigger: GAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGT...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCATCTCGTAGCGTTTaGACTCTTCATGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: DTKPRSCDPVTLGTGSREASRSV*TLHGVQ
Trigger: CTGCACACCATGAAGAGTTCAAACGCTACGAGATGC...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGAGAAGGTCTTGGGGTTaGACCTGTTGGGGTCCAATC +
Preference number: 4 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMRRSWG*TCWGPI
Trigger: GATTGGACCCCAACAGGTTCAACCCCAAGACCTTCT...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACAACGAAGTCCAGCTCTTaGCTCAGCTTTCCACTCTTA +
Preference number: 4 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTTKSSS*LSFPLL
Trigger: TAAGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGT...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCACGTTTGAACTCTTCATaGTGTGCAGCGTCATACTGG +
Preference number: 4 (lower is better)
Translates to: PHILVASSHQKELRSLAPRLNSS*CAASYW
Trigger: CCAGTATGACGCTGCACACCATGAAGAGTTCAAACG...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CAA 72 bp CTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATaGGCTCCACAGAAGGCAGAGTCAGAGACACTAAGC +
Preference number: 4 (lower is better)
Translates to: LVASSHQKELRS*APQKAESETLS
Trigger: GCTTAGTGTCTCTGACTCTGCCTTCTGTGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGAGAAGGTCTTGGGGTTaGACCTGTTGGGGTCCAATC +
Preference number: 4 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRRRSWG*TCWGPI
Trigger: GATTGGACCCCAACAGGTTCAACCCCAAGACCTTCT...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGTCAGCGTTGGCAGCCTaGAGCTTCTCCCGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRSALAA*SFSRKC
Trigger: GCACTTCCGGGAGAAGCTGCAGGCTGCCAACGCTGA...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACAGTTGCTGCTTCCTCTaGTCCATCTGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDSCCFL*SICCSS
Trigger: AGAGCTGCAGCAGATGGAGCAGAGGAAGCAGCAACT...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS-3UTR GCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACAGTTGCTGCTTCCTCTaGTCCATCTGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDSCCFL*SICRTA
Trigger: GGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACT...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACTTGGTTCGGACGTTGTaGCTGACGAAGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDLVRTL*LTKSSS
Trigger: AGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAA...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp TCTCTGAATTCTGCGGACTCCTGCATTCTTATGGCATACACACAAAAACACACATTCGGACGTTGTGGCTaGCGAAGTCCAGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLNSADSCILMAYTQKHTFGRCG*RSPALG
Trigger: GCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAA...TGTGTGTTTTTGTGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATTCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGTTCATGTGGTCCACCTaGAAGTTGGGCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRFMWST*KLGSCF
Trigger: AAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAA...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp TCTCTGAATTCTGCGGACTCCTGCATTCTTATGGCATACACACAAAAACACACACGGTGTCTGCGCTGTTaGTCTTGGAGCTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SLNSADSCILMAYTQKHTRCLRC*SWSFLS
Trigger: CGAGAGGAAGCTCCAAGAGCAACAGCGCAGACACCG...TGTGTGTTTTTGTGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATTCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACTGTTCTTGCAGTTGCTaGTTCCTCTGCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDCSCSC*FLCSIC
Trigger: GCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACA...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGCTCAGGGGGCTGCTCTaGGACCTTCTTCTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRLRGLL*DLLLRS
Trigger: GCTTCTGAGAAGAAGGTCCCAGAGCAGCCCCCTGAG...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR TCA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGAACGTGTGCTGGTTCTaGGGGTCCAGGTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRNVCWF*GSRCSN
Trigger: GTTTGAGCACCTGGACCCTCAGAACCAGCACACGTT...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGCTGGGAATCCAGCTGTaGCAGCTCAGGGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARLGIQL*QLRGLL
Trigger: GAGCAGCCCCCTGAGCTGCCACAGCTGGATTCCCAG...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 72 bp ACAGATACACTAATGTTTATTTGTGCCGGGCTATATTaGGATGGAACTGGGGCACAGAGCAGGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: TDTLMFICAGLY*DGTGAQSRTQQ
Trigger: CTGCTGTGTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAGTGTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
3UTR CAA 72 bp AGGGCAGGATATTCACACAGATACACTAATGTTTATTaGTGCCGGGCTATATTTGGATGGAACTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: RAGYSHRYTNVY*CRAIFGWNWGT
Trigger: TGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAGTGTATCTGTGTGAATATCCTGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 72 bp TTAAGAACATGTGCTGCTCCTACAGAGAACCTGCATTaGGTTTCCAGCGTGTATCCACATTGCTCACAATCA +
Preference number: 4 (lower is better)
Translates to: LRTCAAPTENLH*VSSVYPHCSQS
Trigger: TGATTGTGAGCAATGTGGATACACGCTGGAAACCAAATGCAGGTTCTCTGTAGGAGCAGCACATGTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGACATTCTTCATCACGTaGTCCCGCATGCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARTFFIT*SRMRSR
Trigger: ACGGCTTCGCATGCGGGAGCACGTGATGAAGAATGT...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 72 bp TTTTCAAGGGCAGGAGCCATCTGCACTGGAGAAATGTaGGTTGTTAATCAAATGAGTGTGAGTTTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: FSRAGAICTGEM*VVNQMSVSFSN
Trigger: GTTACTGAAACTCACACTCATTTGATTAACAACCAACATTTCTCCAGTGCAGATGGCTCCTGCCCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 72 bp TCTTTATTCAAGTTTGAGCTTAGGTCCCCAACCTTCTaGATGGAACAGGAAAGAGTGAAGCCTCTAAGTGAA +
Preference number: 4 (lower is better)
Translates to: SLFKFELRSPTF*MEQERVKPLSE
Trigger: TTCACTTAGAGGCTTCACTCTTTCCTGTTCCATCAAGAAGGTTGGGGACCTAAGCTCAAACTTGAATAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGTCCAGGTGCTCAAACTaGTTCAGGAGGTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARSRCSN*FRRFMW
Trigger: CCACATGAACCTCCTGAAGCAGTTTGAGCACCTGGA...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR GCA 90 bp ACACTTAATTGTCTCTTTTTCATCATCAAAGAGTGGGCTATTATCATTGCAAGGCTCTGTTCTTGCAGTTaGTGCTTCCTCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: TLNCLFFIIKEWAIIIARLCSCS*CFLCSI
Trigger: GATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAG...CCTTGCAATGATAATAGCCCACTCTTTGATGATGAAAAAGAGACAATTAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
3UTR CAA 72 bp TTGTTTTTCTCTCTAAATCACGTATGTGGTGCCATCTaGGGTAATAAGAATATATTTACTCAGAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: LFFSLNHVCGAI*GNKNIFTQKPW
Trigger: CCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGCACCACATACGTGATTTAGAGAGAAAAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS GCA 90 bp GCCCGTGTCCGGGGTCTCAGTGGCCTGGCTGTCCTCCTGAGGAGGTaGTGCGCGGTCCACGGGCACTGCCAGCACAGCAGACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: ARVRGLSGLAVLLRR*CAVHGHCQHSRQHQ
Trigger: CTGATGCTGTCTGCTGTGCTGGCAGTGCCCGTGGACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCGGACACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CCA 90 bp CCTGGAGGTACCGGTGGTAGTACAGGCCCGTGTCCGGGGTCTCAGTaGCCTGGCTGTCCTCCTGAGGAGGTGCTGCGCGGTCCACGGGCA +
Preference number: 5 (lower is better)
Translates to: PGGTGGSTGPCPGSQ*PGCPPEEVLRGPRA
Trigger: TGCCCGTGGACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCGGACACGGGCCTGTACTACCACCGGTACCTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS TCA 90 bp TGGCTCAGCTTTCCACTCGGGGTCTCAGTGGCCTGGCTGTCCTCCTaGGGAGGTGCTGCGCGGTCCACGGGCACTGCCAGCACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: WLSFPLGVSVAWLSS*GGAARSTGTASTAD
Trigger: GTCTGCTGTGCTGGCAGTGCCCGTGGACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCGAGTGGAAAGCTGAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211343.2
CDS-3UTR CAA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACTCTGCGCTGTTGCTCTaGGAGCTTCCTCTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNSALLL*ELPLGL
Trigger: GAGGCCGAGAGGAAGCTCCAAGAGCAACAGCGCAGA...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACTGGTCCACCTGCAAGTaGGGCTCCTGCTTTGCATCC +
Preference number: 5 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNWSTCK*GSCFAS
Trigger: GGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCA...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS CCA 90 bp TCATGGTGTGCAGCGTCATACTGGGCGAGGTCTCGGGTGGCCGTCTaGATCAGCAGCTCTAGGTCCCGAGCCTCAAACGTGTGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SWCAASYWARSRVAV*ISSSRSRASNVCWF
Trigger: GAACCAGCACACGTTTGAGGCTCGGGACCTAGAGCTGCTGATCCAGACGGCCACCCGAGACCTCGCCCAGTATGACGCTGCACACCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GTGGGCAGGCCTGGAGTGTGCACTCCAGGTGAGGTGAGCGAGCTCTCCTGCAACTTAATGTCCTCAGCGTaGGCAGCCTGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VGRPGVCTPGEVSELSCNLMSSA*AACSFS
Trigger: GGAGAAGCTGCAGGCTGCCAACGCTGAGGACATTAA...GTTGCAGGAGAGCTCGCTCACCTCACCTGGAGTGCACACTCCAGGCCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS GCA 90 bp GGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTGCTGCTTCCTCTaGTCCATCTGCTGCAGCTCTCTCTTCTGTGCCTCCAGGCGGTCC +
Preference number: 5 (lower is better)
Translates to: GLEGGALCSCSCCFL*SICCSSLFCASRRS
Trigger: GGACCGCCTGGAGGCACAGAAGAGAGAGCTGCAGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS-3UTR CAA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGGCATCCATCTTGGCCTaGAGCAGCATCCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWASILA*SSIRSL
Trigger: GAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGC...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS GCA 90 bp AGCTGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTaGTGCTTCCTCTGCTCCATCTGCTGCAGCTCTCTCTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SCPSGLEGGALCSCS*CFLCSICCSSLFCA
Trigger: GGCACAGAAGAGAGAGCTGCAGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS GCA 90 bp AGCTGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTaGTGCTTCCTCTGCTCCATCTGCAGAACAGCCTGCTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SCPSGLEGGALCSCS*CFLCSICRTACCSS
Trigger: AGAGCTGCAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS GCA 90 bp AACTGCAGCTGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTaGAGTTGCTGCTTCCTCTGCTCCATCTGCAGAACAGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NCSCPSGLEGGALCS*SCCFLCSICRTACC
Trigger: GCAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAGCTGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CCA 90 bp GACACCTCCTGTCGCTTGAGCTCATCCAGCTTGGTTCGGACGTTGTaGCTGACGAAGTCCAGCTCTTGGCTCAGCTTTCCACTCGGGGTC +
Preference number: 5 (lower is better)
Translates to: DTSCRLSSSSLVRTL*LTKSSSWLSFPLGV
Trigger: GACCCCGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211343.2
CDS-3UTR CAA 90 bp CCAATGGGACTTGAGTGGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGTCTCCGGAGCGCTCTGTTCTaGCAGTTGCTGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PMGLEWEAAWACALGSSLRSALF*QLLLPL
Trigger: CAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCG...GAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS GCA 90 bp CTCTTAATGTCCTCAGCGTTGGCAGCCTGCAGCTTCTCCCGGAAGTaGCCATCTGTCTCTAGCACGTTGATGACCTCCTGGAGGTACCGG +
Preference number: 5 (lower is better)
Translates to: LLMSSALAACSFSRK*PSVSSTLMTSWRYR
Trigger: CCGGTACCTCCAGGAGGTCATCAACGTGCTAGAGACAGATGGGCACTTCCGGGAGAAGCTGCAGGCTGCCAACGCTGAGGACATTAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 90 bp CTTCAGGAGGTTCATGTGGTCCACCTGCAAGTTGGGCTCCTGCTTTaGATCCATCTTGGCCTTGAGCAGCATCCGCAGCCTCGACACCTC +
Preference number: 5 (lower is better)
Translates to: LQEVHVVHLQVGLLL*IHLGLEQHPQPRHL
Trigger: GAGGTGTCGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAACCTCCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 90 bp GGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTGCTGCTTCCTCTaGTCCATCTGCAGAACAGCCTGCTGCAGCTCTCTCTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GLEGGALCSCSCCFL*SICRTACCSSLFCA
Trigger: GGCACAGAAGAGAGAGCTGCAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CCA 90 bp CTTCTTCTCAGAAGCAGGCACATCTTTCTGGTCACCTGCTGGAGCTaGGACAGGAGCGTCATCTGTGTCTGCACGGAACTGCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LLLRSRHIFLVTCWS*DRSVICVCTELQLP
Trigger: GGGCAGCTGCAGTTCCGTGCAGACACAGATGACGCTCCTGTCCCAGCTCCAGCAGGTGACCAGAAAGATGTGCCTGCTTCTGAGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGTTGAGCTCATCCAGCTaGGTTCGGACGTTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWLSSSS*VRTLWL
Trigger: CAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAA...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CCAATGGGACTTGAGTGGGAAGCCGCATGGGCATGTGCTTTGGGGAGCAGTCTCTTGAGCTCATCCAGCTaGGTTCGGACGTTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PMGLEWEAAWACALGSSLLSSSS*VRTLWL
Trigger: CAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAA...GAGACTGCTCCCCAAAGCACATGCCCATGCGGCTTCCCACTCAAGTCCCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGGACACCTCCTGTCGCTaGAGCTCATCCAGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWDTSCR*SSSSLV
Trigger: AACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTC...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACAAGCTGCCCGTCAGGTTaGGAAGGCGGAGCGCTCTGT +
Preference number: 5 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTSCPSG*EGGALC
Trigger: ACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAGCT...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS TCA 90 bp TGGATCAGCAGCTCTAGGTCCCGAGCCTCAAACGTGTGCTGGTTCTaGGGGTCCAGGTGCTCAAACTGCTTCAGGAGGTTCATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: WISSSRSRASNVCWF*GSRCSNCFRRFMWS
Trigger: GGACCACATGAACCTCCTGAAGCAGTTTGAGCACCTGGACCCTCAGAACCAGCACACGTTTGAGGCTCGGGACCTAGAGCTGCTGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 90 bp AACTGCTTCAGGAGGTTCATGTGGTCCACCTGCAAGTTGGGCTCCTaGTTTGCATCCATCTTGGCCTTGAGCAGCATCCGCAGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: NCFRRFMWSTCKLGS*FASILALSSIRSLD
Trigger: GTCGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAACCTCCTGAAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCACCGGTGTCTGCGCTGTaGCTCTTGGAGCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: PHILVASSHQKELRSLAPPVSAL*LLELPL
Trigger: GAGAGGAAGCTCCAAGAGCAACAGCGCAGACACCGG...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS GCA 90 bp CTCATGTTCCTTGAGCATCTCGTAGCGTTTGAACTCTTCATGGTGTaGAGCGTCATACTGGGCGAGGTCTCGGGTGGCCGTCTGGATCAG +
Preference number: 5 (lower is better)
Translates to: LMFLEHLVAFELFMV*SVILGEVSGGRLDQ
Trigger: CTGATCCAGACGGCCACCCGAGACCTCGCCCAGTATGACGCTGCACACCATGAAGAGTTCAAACGCTACGAGATGCTCAAGGAACATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CCA 90 bp TCATCCAGCTTGGTTCGGACGTTGTGGCTGACGAAGTCCAGCTCTTaGCTCAGCTTTCCACTCTTAATGTCCTCAGCGTTGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSSLVRTLWLTKSSS*LSFPLLMSSALAAC
Trigger: GCAGGCTGCCAACGCTGAGGACATTAAGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGTTAATGTCCTCAGCGTaGGCAGCCTGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRLMSSA*AACSFS
Trigger: GGAGAAGCTGCAGGCTGCCAACGCTGAGGACATTAA...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCATCCATCTTGGCCTaGAGCAGCATCCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: DTKPRSCDPVTLGTGSREASILA*SSIRSL
Trigger: GAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGC...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGTGCTTTGCATCCATCTaGGCCTTGAGCAGCATCCGC +
Preference number: 5 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRCFASI*ALSSIR
Trigger: GCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCA...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACATGGTCCACCTGCAAGTaGGGCTCCTGCTTTGCATCC +
Preference number: 5 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTWSTCK*GSCFAS
Trigger: GGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCA...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGCTCCTTCAACTGGGCTaGGCTGCCAGGAACATTGAC +
Preference number: 5 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRLLQLG*AARNID
Trigger: GTCAATGTTCCTGGCAGCCAAGCCCAGTTGAAGGAG...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCAAAGAAGGTCTTGGGGTaGAACCTGTTGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPKKVLG*NLLGSN
Trigger: ATTGGACCCCAACAGGTTCAACCCCAAGACCTTCTT...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp AGCAGAAGCACATCTGAGGAACAGGGTAGCCCCTGTTCTGCTCCCAGGAGGCCAACCTTCTCCAGCTCCTaGGTAAAGAGAGCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SRSTSEEQGSPCSAPRRPTFSSS*VKRASS
Trigger: ACTGGAAGCTCTCTTTACCAAGGAGCTGGAGAAGGT...TGGCCTCCTGGGAGCAGAACAGGGGCTACCCTGTTCCTCAGATGTGCTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CCCCACATCCTGGTGGCCTCTAGCCACCAAAAGGAATTGAGATCATTGGCTCCACGGAGCGCTCTGTTCTaGCAGTTGCTGCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PHILVASSHQKELRSLAPRSALF*QLLLPL
Trigger: CAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCG...TGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCCACCAGGATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS CCA 90 bp GACACCTCCTGTCGCTTGAGCTCATCCAGCTTGGTTCGGACGTTGTaGCTGACGAAGTCCAGCTCTTGGCTCAGCTTTCCACTCTTAATG +
Preference number: 5 (lower is better)
Translates to: DTSCRLSSSSLVRTL*LTKSSSWLSFPLLM
Trigger: CATTAAGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GTGTATCCACATTGCTCACAATCAACTGTAACTCCGGCTCCTGGGGATCTGATGTCTGCGCTGTTGCTCTaGGAGCTTCCTCTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: VYPHCSQSTVTPAPGDLMSALLL*ELPLGL
Trigger: GAGGCCGAGAGGAAGCTCCAAGAGCAACAGCGCAGA...CATCAGATCCCCAGGAGCCGGAGTTACAGTTGATTGTGAGCAATGTGGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTGGAAAGGGACCTTTCTGACCTGGGAAAAGTAACTTGTGCTGTTAGAAGCTGGAGCTGCCCGTCAGGTTaGGAAGGCGGAGCGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LERDLSDLGKVTCAVRSWSCPSG*EGGALC
Trigger: ACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAGCT...CCAGCTTCTAACAGCACAAGTTACTTTTCCCAGGTCAGAAAGGTCCCTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS GCA 90 bp CTCATGTTCCTTGAGCATCTCGTAGCGTTTGAACTCTTCATGGTGTaGAGCGTCATACTGGGCGAGGTCTCGGGTGGCCTTAATGTCCTC +
Preference number: 5 (lower is better)
Translates to: LMFLEHLVAFELFMV*SVILGEVSGGLNVL
Trigger: GAGGACATTAAGGCCACCCGAGACCTCGCCCAGTATGACGCTGCACACCATGAAGAGTTCAAACGCTACGAGATGCTCAAGGAACATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210449.2
CDS-3UTR CAA 90 bp AATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGACCCGGTGTCTGCGCTGTaGCTCTTGGAGCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: NVYLCRAIFGWNWGTEQDPVSAL*LLELPL
Trigger: GAGAGGAAGCTCCAAGAGCAACAGCGCAGACACCGG...GTCCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TGTGGCCTGAAGCCAGGGAAGTTGGTGAACCAATTTTCAGGAGCCCTGAGCAGGAGTATGAAGAAGGTCTaGGGGTTGAACCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: CGLKPGKLVNQFSGALSRSMKKV*GLNLLG
Trigger: CCCCAACAGGTTCAACCCCAAGACCTTCTTCATACT...CCTGCTCAGGGCTCCTGAAAATTGGTTCACCAACTTCCCTGGCTTCAGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTGCAAGGCCACTTCATCTGGCTTCCACACTGTCTGTGGGAACCTGAGGGCTGGAGGACACCATCACTGTaGATGTCATGCAGTATGAAG +
Preference number: 5 (lower is better)
Translates to: LQGHFIWLPHCLWEPEGWRTPSL*MSCSMK
Trigger: CTTCATACTGCATGACATCAACAGTGATGGTGTCCT...CCAGCCCTCAGGTTCCCACAGACAGTGTGGAAGCCAGATGAAGTGGCCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACAGCTCTGTTCTTGCAGTaGCTGCTTCCTCTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTALFLQ*LLPLLH
Trigger: ATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGC...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGACGAAGTCCAGCTCTaGGCTCAGCTTTCCACTCTT +
Preference number: 5 (lower is better)
Translates to: DTKPRSCDPVTLGTGSREDEVQL*AQLSTL
Trigger: AAGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTC...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGGCTGAGCCTGGAACAACCTTCTCCAGCTCCTaGGTAAAGAGAGCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SCDPVTLGTGSREAEPGTTFSSS*VKRASS
Trigger: ACTGGAAGCTCTCTTTACCAAGGAGCTGGAGAAGGT...TGTTCCAGGCTCAGCCTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGTGCTTTGCATCCATCTaGGCCTTGAGCAGCATCCGC +
Preference number: 5 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRCFASI*ALSSIR
Trigger: GCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCA...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGCTCCTTCAACTGGGCTaGGCTGCCAGGAACATTGAC +
Preference number: 5 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRLLQLG*AARNID
Trigger: GTCAATGTTCCTGGCAGCCAAGCCCAGTTGAAGGAG...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GACACTAAGCCAAGGTCCTGTGATCCAGTGACACTAGGTACAGGAAGCAGAGAGAGTATGAAGAAGGTCTaGGGGTTGAACCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: DTKPRSCDPVTLGTGSRESMKKV*GLNLLG
Trigger: CCCCAACAGGTTCAACCCCAAGACCTTCTTCATACT...CTCTCTGCTTCCTGTACCTAGTGTCACTGGATCACAGGACCTTGGCTTAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGTCTGTCTCTAGCACGTaGATGACCTCCTGGAGGTAC +
Preference number: 5 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRSVSST*MTSWRY
Trigger: GTACCTCCAGGAGGTCATCAACGTGCTAGAGACAGA...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp CTAATGTTTATTTGTGCCGGGCTATATTTGGATGGAACTGGGGCACAGAGCAGGAAGAAGGTCTTGGGGTaGAACCTGTTGGGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: LMFICAGLYLDGTGAQSRKKVLG*NLLGSN
Trigger: ATTGGACCCCAACAGGTTCAACCCCAAGACCTTCTT...CCTGCTCTGTGCCCCAGTTCCATCCAAATATAGCCCGGCACAAATAAACATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GCAGGGCTTGGAAGAGGGCAGGATATTCACACAGATACACTAATGTTTATTTGTGACACCTCCTGTCGCTaGAGCTCATCCAGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: AGLGRGQDIHTDTLMFICDTSCR*SSSSLV
Trigger: AACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTC...ACAAATAAACATTAGTGTATCTGTGTGAATATCCTGCCCTCTTCCAAGCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp TCTCTGAATTCTGCGGACTCCTGCATTCTTATGGCATACACACAAAAACACACATCTGTCTCTAGCACGTaGATGACCTCCTGGAGGTAC +
Preference number: 5 (lower is better)
Translates to: SLNSADSCILMAYTQKHTSVSST*MTSWRY
Trigger: GTACCTCCAGGAGGTCATCAACGTGCTAGAGACAGA...TGTGTGTTTTTGTGTGTATGCCATAAGAATGCAGGAGTCCGCAGAATTCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGGCTCTGTTCTTGCAGTaGCTGCTTCCTCTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRALFLQ*LLPLLH
Trigger: ATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGC...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS-3UTR CAA 90 bp GCCATCTTGGGTAATAAGAATATATTTACTCAGAAGCCATGGCTGCTAACCAGGAGGACACCATCACTGTaGATGTCATGCAGTATGAAG +
Preference number: 5 (lower is better)
Translates to: AILGNKNIFTQKPWLLTRRTPSL*MSCSMK
Trigger: CTTCATACTGCATGACATCAACAGTGATGGTGTCCT...CCTGGTTAGCAGCCATGGCTTCTGAGTAAATATATTCTTATTACCCAAGATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS TCA 72 bp CCCGTGTCCGGGGTCTCAGTGGCCTGGCTGTCCTCCTaGGGAGGTGCTGCGCGGTCCACGGGCACTGCCAGC +
Preference number: 6 (lower is better)
Translates to: PVSGVSVAWLSS*GGAARSTGTAS
Trigger: GCTGGCAGTGCCCGTGGACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCGGACACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS TCA 72 bp GGTCCTGGGAGCGCCCCAGGGCCTCTGTCTCCTGGCTaGGGCGCTGGGCCCTGGCATTCAGCTCAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: GPGSAPGPLSPG*GAGPWHSAQLP
Trigger: GGGAAGCTGAGCTGAATGCCAGGGCCCAGCGCCTCAGCCAGGAGACAGAGGCCCTGGGGCGCTCCCAGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211765.2
CDS GCA 72 bp CGGGGTCTCAGTGGCCTGGCTGTCCTCCTGAGGAGGTaGTGCGCGGTCCACGGGCACTGCCAGCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: RGLSGLAVLLRR*CAVHGHCQHSR
Trigger: TCTGCTGTGCTGGCAGTGCCCGTGGACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS TCA 72 bp TTTCCACTCGGGGTCTCAGTGGCCTGGCTGTCCTCCTaGGGAGGTGCTGCGCGGTCCACGGGCACTGCCAGC +
Preference number: 6 (lower is better)
Translates to: FPLGVSVAWLSS*GGAARSTGTAS
Trigger: GCTGGCAGTGCCCGTGGACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCGAGTGGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211343.2
CDS GCA 72 bp GGTCTCAGTGGCCTGGCTGTCCTCCTGAGGAGGTGCTaGGCGGTCCACGGGCACTGCCAGCACAGCAGACAG +
Preference number: 6 (lower is better)
Translates to: GLSGLAVLLRRC*AVHGHCQHSRQ
Trigger: CTGTCTGCTGTGCTGGCAGTGCCCGTGGACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CCA 72 bp ACCGGTGGTAGTACAGGCCCGTGTCCGGGGTCTCAGTaGCCTGGCTGTCCTCCTGAGGAGGTGCTGCGCGGT +
Preference number: 6 (lower is better)
Translates to: TGGSTGPCPGSQ*PGCPPEEVLRG
Trigger: ACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCGGACACGGGCCTGTACTACCACCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CCA 72 bp CCAGCTCTTGGCTCAGCTTTCCACTCGGGGTCTCAGTaGCCTGGCTGTCCTCCTGAGGAGGTGCTGCGCGGT +
Preference number: 6 (lower is better)
Translates to: PALGSAFHSGSQ*PGCPPEEVLRG
Trigger: ACCGCGCAGCACCTCCTCAGGAGGACAGCCAGGCCACTGAGACCCCGAGTGGAAAGCTGAGCCAAGAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211343.2
CDS CCA 72 bp GCAGCGTCATACTGGGCGAGGTCTCGGGTGGCCGTCTaGATCAGCAGCTCTAGGTCCCGAGCCTCAAACGTG +
Preference number: 6 (lower is better)
Translates to: AASYWARSRVAV*ISSSRSRASNV
Trigger: CACGTTTGAGGCTCGGGACCTAGAGCTGCTGATCCAGACGGCCACCCGAGACCTCGCCCAGTATGACGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CCA 72 bp CATGGTGTGCAGCGTCATACTGGGCGAGGTCTCGGGTaGCCGTCTGGATCAGCAGCTCTAGGTCCCGAGCCT +
Preference number: 6 (lower is better)
Translates to: HGVQRHTGRGLG*PSGSAALGPEP
Trigger: AGGCTCGGGACCTAGAGCTGCTGATCCAGACGGCCACCCGAGACCTCGCCCAGTATGACGCTGCACACCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp TGGGCGAGGTCTCGGGTGGCCTTAATGTCCTCAGCGTaGGCAGCCTGCAGCTTCTCCCGGAAGTGCCCATCT +
Preference number: 6 (lower is better)
Translates to: WARSRVALMSSA*AACSFSRKCPS
Trigger: AGATGGGCACTTCCGGGAGAAGCTGCAGGCTGCCAACGCTGAGGACATTAAGGCCACCCGAGACCTCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210449.2
CDS GCA 72 bp ACCTGCTGGAGCTGGGACAGGAGCGTCATCTGTGTCTaGACGGAACTGCAGCTGCCCGTCAGGTTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: TCWSWDRSVICV*TELQLPVRFGR
Trigger: CCTTCCAAACCTGACGGGCAGCTGCAGTTCCGTGCAGACACAGATGACGCTCCTGTCCCAGCTCCAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS CAA 90 bp AGCATCCGCAGCCTCGACACCTCCTGTCGCTTGAGCTCATCCAGCTaGGTTCGGACGTTGTGGCTGACGAAGTCCAGCTCTTGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SIRSLDTSCRLSSSS*VRTLWLTKSSSWLS
Trigger: GCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTCGAGGCTGCGGATGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 90 bp CAGCTGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTaGCTGCTTCCTCTGCTCCATCTGCAGAACAGCCTGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: QLPVRFGRRSALFLQ*LLPLLHLQNSLLQL
Trigger: GAGCTGCAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS TCA 72 bp GCAAGTTGGGCTCCTGCTTTGCATCCATCTTGGCCTTaGGCAGCATCCGCAGCCTCGACACCTCCTGTCGCT +
Preference number: 6 (lower is better)
Translates to: ASWAPALHPSWP*AASAASTPPVA
Trigger: AGCGACAGGAGGTGTCGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp ACATTGACTTTGGGGTGTTCCCGGTGTCTGCGCTGTTaGTCTTGGAGCTTCCTCTCGGCCTCCTTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: TLTLGCSRCLRC*SWSFLSASFRC
Trigger: GCAGCGGAAGGAGGCCGAGAGGAAGCTCCAAGAGCAACAGCGCAGACACCGGGAACACCCCAAAGTCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp GGCGGAGCGCTCTGTTCTTGCAGTTGCTGCTTCCTCTaGTCCATCTGCTGCAGCTCTCTCTTCTGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: GGALCSCSCCFL*SICCSSLFCAS
Trigger: GGAGGCACAGAAGAGAGAGCTGCAGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS GCA 72 bp TCTCGGGTGGCCTTAATGTCCTCAGCGTTGGCAGCCTaGAGCTTCTCCCGGAAGTGCCCATCTGTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: SRVALMSSALAA*SFSRKCPSVSS
Trigger: GCTAGAGACAGATGGGCACTTCCGGGAGAAGCTGCAGGCTGCCAACGCTGAGGACATTAAGGCCACCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210449.2
CDS GCA 72 bp GGCGGAGCGCTCTGTTCTTGCAGTTGCTGCTTCCTCTaGTCCATCTGCAGAACAGCCTGCTGCAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: GGALCSCSCCFL*SICRTACCSSL
Trigger: GAGAGAGCTGCAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CCA 72 bp GATGCCAGGAACTCCTCCAGGGTCACAAGCCGGTCCTaGTTGGTGTCCACATTCTTCATCACGTGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: DARNSSRVTSRS*LVSTFFITCSR
Trigger: GCGGGAGCACGTGATGAAGAATGTGGACACCAACCAGGACCGGCTTGTGACCCTGGAGGAGTTCCTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211765.2
CDS CCA 72 bp TTGGTTCGGACGTTGTGGCTGACGAAGTCCAGCTCTTaGCTCAGCTTTCCACTCGGGGTCTCAGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LVRTLWLTKSSS*LSFPLGVSVAW
Trigger: CCAGGCCACTGAGACCCCGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211343.2
CDS CAA 72 bp TTGAGCAGCATCCGCAGCCTCGACACCTCCTGTCGCTaGAGCTCATCCAGCTTGGTTCGGACGTTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: LSSIRSLDTSCR*SSSSLVRTLWL
Trigger: CAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTCGAGGCTGCGGATGCTGCTCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp TGCAAGTTGGGCTCCTGCTTTGCATCCATCTTGGCCTaGAGCAGCATCCGCAGCCTCGACACCTCCTGTCGC +
Preference number: 6 (lower is better)
Translates to: CKLGSCFASILA*SSIRSLDTSCR
Trigger: GCGACAGGAGGTGTCGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp TCCACCTGCAAGTTGGGCTCCTGCTTTGCATCCATCTaGGCCTTGAGCAGCATCCGCAGCCTCGACACCTCC +
Preference number: 6 (lower is better)
Translates to: STCKLGSCFASI*ALSSIRSLDTS
Trigger: GGAGGTGTCGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp CTGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTaGCAGTTGCTGCTTCCTCTGCTCCATCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: LPVRFGRRSALF*QLLLPLLHLLQ
Trigger: CTGCAGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS CAA 90 bp ATCTTGGCCTTGAGCAGCATCCGCAGCCTCGACACCTCCTGTCGCTaGAGCTCATCCAGCTTGGTTCGGACGTTGTGGCTGACGAAGTCC +
Preference number: 6 (lower is better)
Translates to: ILALSSIRSLDTSCR*SSSSLVRTLWLTKS
Trigger: GGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTCGAGGCTGCGGATGCTGCTCAAGGCCAAGAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 90 bp TGGTCCACCTGCAAGTTGGGCTCCTGCTTTGCATCCATCTTGGCCTaGAGCAGCATCCGCAGCCTCGACACCTCCTGTCGCTTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: WSTCKLGSCFASILA*SSIRSLDTSCRLSS
Trigger: TGAGCTCAAGCGACAGGAGGTGTCGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 90 bp CTCGACACCTCCTGTCGCTTGAGCTCATCCAGCTTGGTTCGGACGTaGTGGCTGACGAAGTCCAGCTCTTGGCTCAGCTTTCCACTCGGG +
Preference number: 6 (lower is better)
Translates to: LDTSCRLSSSSLVRT*WLTKSSSWLSFPLG
Trigger: CCCGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211343.2
CDS CAA 90 bp GAACTGCAGCTGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTaGCAGTTGCTGCTTCCTCTGCTCCATCTGCAGAACAGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: ELQLPVRFGRRSALF*QLLLPLLHLQNSLL
Trigger: CAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAGCTGCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CAA 90 bp TTCATGTGGTCCACCTGCAAGTTGGGCTCCTGCTTTGCATCCATCTaGGCCTTGAGCAGCATCCGCAGCCTCGACACCTCCTGTCGCTTG +
Preference number: 6 (lower is better)
Translates to: FMWSTCKLGSCFASI*ALSSIRSLDTSCRL
Trigger: CAAGCGACAGGAGGTGTCGAGGCTGCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp GGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTGCTaGTTCCTCTGCTCCATCTGCAGAACAGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GLEGGALCSCSC*FLCSICRTACC
Trigger: GCAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CAA 72 bp AGCCTCGACACCTCCTGTCGCTTGAGCTCATCCAGCTaGGTTCGGACGTTGTGGCTGACGAAGTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SLDTSCRLSSSS*VRTLWLTKSSS
Trigger: AGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTCGAGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp AACATTGACTTTGGGGTGTTCCCGGTGTCTGCGCTGTaGCTCTTGGAGCTTCCTCTCGGCCTCCTTCCGCTG +
Preference number: 6 (lower is better)
Translates to: NIDFGVFPVSAL*LLELPLGLLPL
Trigger: CAGCGGAAGGAGGCCGAGAGGAAGCTCCAAGAGCAACAGCGCAGACACCGGGAACACCCCAAAGTCAATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp CACACCTCCTTCAACTGGGCTTGGCTGCCAGGAACATaGACTTTGGGGTGTTCCCGGTGTCTGCGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: HTSFNWAWLPGT*TLGCSRCLRCC
Trigger: GCAACAGCGCAGACACCGGGAACACCCCAAAGTCAATGTTCCTGGCAGCCAAGCCCAGTTGAAGGAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211765.2
CDS CAA 72 bp CTGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTaGCAGTTGCTGCTTCCTCTGCTCCATCTGCAGAAC +
Preference number: 6 (lower is better)
Translates to: LPVRFGRRSALF*QLLLPLLHLQN
Trigger: GTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS TCA 72 bp AGCTCTAGGTCCCGAGCCTCAAACGTGTGCTGGTTCTaGGGGTCCAGGTGCTCAAACTGCTTCAGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: SSRSRASNVCWF*GSRCSNCFRRF
Trigger: GAACCTCCTGAAGCAGTTTGAGCACCTGGACCCTCAGAACCAGCACACGTTTGAGGCTCGGGACCTAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp AGGAGGTTCATGTGGTCCACCTGCAAGTTGGGCTCCTaGTTTGCATCCATCTTGGCCTTGAGCAGCATCCGC +
Preference number: 6 (lower is better)
Translates to: RRFMWSTCKLGS*FASILALSSIR
Trigger: GCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAACCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp CTTGAGCATCTCGTAGCGTTTGAACTCTTCATGGTGTaGAGCGTCATACTGGGCGAGGTCTCGGGTGGCCGT +
Preference number: 6 (lower is better)
Translates to: LEHLVAFELFMV*SVILGEVSGGR
Trigger: ACGGCCACCCGAGACCTCGCCCAGTATGACGCTGCACACCATGAAGAGTTCAAACGCTACGAGATGCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp GGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTGCTaGTTCCTCTGCTCCATCTGCTGCAGCTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: GLEGGALCSCSC*FLCSICCSSLF
Trigger: GAAGAGAGAGCTGCAGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS GCA 72 bp TCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTaGTGCTTCCTCTGCTCCATCTGCTGCAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SGLEGGALCSCS*CFLCSICCSSL
Trigger: GAGAGAGCTGCAGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033096.16
CDS GCA 72 bp AAATGCTGGGAATCCAGCTGTGGCAGCTCAGGGGGCTaGTCTGGGACCTTCTTCTCAGAAGCAGGCACATCT +
Preference number: 6 (lower is better)
Translates to: KCWESSCGSSGG*SGTFFSEAGTS
Trigger: AGATGTGCCTGCTTCTGAGAAGAAGGTCCCAGAGCAGCCCCCTGAGCTGCCACAGCTGGATTCCCAGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS GCA 72 bp TCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTTaGTGCTTCCTCTGCTCCATCTGCAGAACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: SGLEGGALCSCS*CFLCSICRTAC
Trigger: GCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS GCA 72 bp TGCCCGTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTaGAGTTGCTGCTTCCTCTGCTCCATCTGCAGAACA +
Preference number: 6 (lower is better)
Translates to: CPSGLEGGALCS*SCCFLCSICRT
Trigger: TGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGACGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CCA 72 bp GGGTCCAGGTGCTCAAACTGCTTCAGGAGGTTCATGTaGTCCACCTGCAAGTTGGGCTCCTGCTTTGCATCC +
Preference number: 6 (lower is better)
Translates to: GSRCSNCFRRFM*STCKLGSCFAS
Trigger: GGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAACCTCCTGAAGCAGTTTGAGCACCTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CCA 72 bp AGAAGCAGGCACATCTTTCTGGTCACCTGCTGGAGCTaGGACAGGAGCGTCATCTGTGTCTGCACGGAACTG +
Preference number: 6 (lower is better)
Translates to: RSRHIFLVTCWS*DRSVICVCTEL
Trigger: CAGTTCCGTGCAGACACAGATGACGCTCCTGTCCCAGCTCCAGCAGGTGACCAGAAAGATGTGCCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033096.16
ENSMUST00000211765.2
CDS CAA 72 bp TCCTTCAACTGGGCTTGGCTGCCAGGAACATTGACTTaGGGGTGTTCCCGGTGTCTGCGCTGTTGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SFNWAWLPGTLT*GCSRCLRCCSW
Trigger: CCAAGAGCAACAGCGCAGACACCGGGAACACCCCAAAGTCAATGTTCCTGGCAGCCAAGCCCAGTTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211765.2
CDS CAA 72 bp GTCAGGTTTGGAAGGCGGAGCGCTCTGTTCTTGCAGTaGCTGCTTCCTCTGCTCCATCTGCAGAACAGCCTG +
Preference number: 6 (lower is better)
Translates to: VRFGRRSALFLQ*LLPLLHLQNSL
Trigger: CAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAGCGCTCCGCCTTCCAAACCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CAA 90 bp CTCGACACCTCCTGTCGCTTGAGCTCATCCAGCTTGGTTCGGACGTaGTGGCTGACGAAGTCCAGCTCTTGGCTCAGCTTTCCACTCTTA +
Preference number: 6 (lower is better)
Translates to: LDTSCRLSSSSLVRT*WLTKSSSWLSFPLL
Trigger: TAAGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACAGGAGGTGTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 90 bp AGGTGCTCAAACTGCTTCAGGAGGTTCATGTGGTCCACCTGCAAGTaGGGCTCCTGCTTTGCATCCATCTTGGCCTTGAGCAGCATCCGC +
Preference number: 6 (lower is better)
Translates to: RCSNCFRRFMWSTCK*GSCFASILALSSIR
Trigger: GCGGATGCTGCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAACCTCCTGAAGCAGTTTGAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp AGCTTTCCACTCTTAATGTCCTCAGCGTTGGCAGCCTaGAGCTTCTCCCGGAAGTGCCCATCTGTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: SFPLLMSSALAA*SFSRKCPSVSS
Trigger: GCTAGAGACAGATGGGCACTTCCGGGAGAAGCTGCAGGCTGCCAACGCTGAGGACATTAAGAGTGGAAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS GCA 72 bp CTTGAGCATCTCGTAGCGTTTGAACTCTTCATGGTGTaGAGCGTCATACTGGGCGAGGTCTCGGGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: LEHLVAFELFMV*SVILGEVSGGL
Trigger: AAGGCCACCCGAGACCTCGCCCAGTATGACGCTGCACACCATGAAGAGTTCAAACGCTACGAGATGCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210449.2
CDS GCA 72 bp CTCTGTTCTTGCAGTTGCTGCTTCCTCTGCTCCATCTaGAGAACAGCCTGCTGCAGCTCTCTCTTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: LCSCSCCFLCSI*RTACCSSLFCA
Trigger: GGCACAGAAGAGAGAGCTGCAGCAGGCTGTTCTGCAGATGGAGCAGAGGAAGCAGCAACTGCAAGAACAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211765.2
CDS CCA 72 bp TGTCGCTTGAGCTCATCCAGCTTGGTTCGGACGTTGTaGCTGACGAAGTCCAGCTCTTGGCTCAGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: CRLSSSSLVRTL*LTKSSSWLSFP
Trigger: TGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAAGCTGGATGAGCTCAAGCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp TCTTGGCTCAGCTTTCCACTCTTAATGTCCTCAGCGTaGGCAGCCTGCAGCTTCTCCCGGAAGTGCCCATCT +
Preference number: 6 (lower is better)
Translates to: SWLSFPLLMSSA*AACSFSRKCPS
Trigger: AGATGGGCACTTCCGGGAGAAGCTGCAGGCTGCCAACGCTGAGGACATTAAGAGTGGAAAGCTGAGCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 72 bp AACTGCTTCAGGAGGTTCATGTGGTCCACCTGCAAGTaGGGCTCCTGCTTTGCATCCATCTTGGCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: NCFRRFMWSTCK*GSCFASILALS
Trigger: GCTCAAGGCCAAGATGGATGCAAAGCAGGAGCCCAACTTGCAGGTGGACCACATGAACCTCCTGAAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000211343.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CCA 72 bp TTGGTTCGGACGTTGTGGCTGACGAAGTCCAGCTCTTaGCTCAGCTTTCCACTCTTAATGTCCTCAGCGTTG +
Preference number: 6 (lower is better)
Translates to: LVRTLWLTKSSS*LSFPLLMSSAL
Trigger: CAACGCTGAGGACATTAAGAGTGGAAAGCTGAGCCAAGAGCTGGACTTCGTCAGCCACAACGTCCGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000033096.16
ENSMUST00000209436.2
ENSMUST00000211682.2
ENSMUST00000211765.2
CDS CAA 90 bp TCTAGGACACCATCACTGTTGATGTCATGCAGTATGAAGAAGGTCTaGGGGTTGAACCTGTTGGGGTCCAATCCATCCAACTCCTCCCAC +
Preference number: 6 (lower is better)
Translates to: SRTPSLLMSCSMKKV*GLNLLGSNPSNSSH
Trigger: GTGGGAGGAGTTGGATGGATTGGACCCCAACAGGTTCAACCCCAAGACCTTCTTCATACTGCATGACATCAACAGTGATGGTGTCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211765.2
CDS CAA 72 bp CTGTTGATGTCATGCAGTATGAAGAAGGTCTTGGGGTaGAACCTGTTGGGGTCCAATCCATCCAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: LLMSCSMKKVLG*NLLGSNPSNSS
Trigger: GGAGGAGTTGGATGGATTGGACCCCAACAGGTTCAACCCCAAGACCTTCTTCATACTGCATGACATCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211765.2
CDS CAA 72 bp CCATCACTGTTGATGTCATGCAGTATGAAGAAGGTCTaGGGGTTGAACCTGTTGGGGTCCAATCCATCCAAC +
Preference number: 6 (lower is better)
Translates to: PSLLMSCSMKKV*GLNLLGSNPSN
Trigger: GTTGGATGGATTGGACCCCAACAGGTTCAACCCCAAGACCTTCTTCATACTGCATGACATCAACAGTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033096.16
ENSMUST00000210449.2
ENSMUST00000211765.2