Pregenerated sensors for NUBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039183Ensembl transcript IDs: ENSMUST00000044252.7, ENSMUST00000234261.2, ENSMUST00000234293.2, ENSMUST00000234352.2, ENSMUST00000234489.2, ENSMUST00000234579.2, ENSMUST00000234583.2, ENSMUST00000234597.2, ENSMUST00000234598.2, ENSMUST00000234674.2, ENSMUST00000234928.2, ENSMUST00000234968.2, ENSMUST00000235055.2
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGCCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGG | + |
Preference number: 1 (lower is better) Translates to: SLKRELQPAGPAPPH*RWRRHWCTQRSVGR Trigger: CCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR CCA 90 bp | GGGGCGCAGGGCTTCCATAGTGGCCATGTGCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAGATAATCCAGCTGCCCCCAGGCCAC | + |
Preference number: 1 (lower is better) Translates to: GAQGFHSGHVLIRGP*RCVHNQIIQLPPGH Trigger: GTGGCCTGGGGGCAGCTGGATTATCTGGTTGTGGACACACCTCCAGGGACCTCTGATGAGCACATGGCCACTATGGAAGCCCTGCGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR GCA 90 bp | CCACAAAGACAGGCACCCAGCCATTGTCACACTGGTGCACGGCCTTaGCTTGTGCACGGAGCATGTGTGGTATGCTGGGACCGCACAGGT | + |
Preference number: 1 (lower is better) Translates to: PQRQAPSHCHTGARP*LVHGACVVCWDRTG Trigger: ACCTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTGACAATGGCTGGGTGCCTGTCTTTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR TCA 90 bp | AGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTaGCCTGGGGCAGAAGTGACTAGGGCTGGACGAAAGCCTATAGGC | + |
Preference number: 1 (lower is better) Translates to: STGQLLCGVAMRAAC*PGAEVTRAGRKPIG Trigger: GCCTATAGGCTTTCGTCCAGCCCTAGTCACTTCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR GCA 90 bp | TGTGGGCAGGTGAAGCCGCTCATGTTCTCTATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAGAAGGTCAGCTCCCGCCTCACATCC | + |
Preference number: 1 (lower is better) Translates to: CGQVKPLMFSMTPIT*SPVFLQKVSSRLTS Trigger: GGATGTGAGGCGGGAGCTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCGGCTTCACCTGCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR CCA 90 bp | GGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGAAAGCACTaGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACC | + |
Preference number: 1 (lower is better) Translates to: GTQHSMCGSVSMRKH*PAPVWCGYESSLLT Trigger: GGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR TCA 90 bp | TTTTCCAGCAGGAACCCCACAGACATAAGGGAGATGCTCTGCTCCTaGTCCACAAAGACAGGCACCCAGCCATTGTCACACTGGTGCACG | + |
Preference number: 1 (lower is better) Translates to: FSSRNPTDIREMLCS*STKTGTQPLSHWCT Trigger: CGTGCACCAGTGTGACAATGGCTGGGTGCCTGTCTTTGTGGATCAGGAGCAGAGCATCTCCCTTATGTCTGTGGGGTTCCTGCTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR TCA 90 bp | GTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATaGGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCA | + |
Preference number: 1 (lower is better) Translates to: VSQKAHNTACVGQSR*ESTGQLLCGVAMRA Trigger: TGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR CCA 90 bp | AATTCCTGGATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTaGGAATCCAGGGGGACAGAGCCTGCAATGACAAAGGCCAGGAAA | + |
Preference number: 1 (lower is better) Translates to: NSWMKSRPSSKLLVS*ESRGTEPAMTKARK Trigger: TTTCCTGGCCTTTGTCATTGCAGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCATCCAGGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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3UTR GCA 90 bp | CAGGGCAGACATCCTGTGCACAACTCTCTGGGCTATGGACGTGAGTaGGGAATATGCAGTGCTTTTGGGAAATTCCTGGATGAAGTCACG | + |
Preference number: 1 (lower is better) Translates to: QGRHPVHNSLGYGRE*GICSAFGKFLDEVT Trigger: CGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTCCGCACTCACGTCCATAGCCCAGAGAGTTGTGCACAGGATGTCTGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | ACAGAGCCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTGCCGCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 2 (lower is better) Translates to: TEPKKGTPASRASSSPLPPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...CGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGCTCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | GGTCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCCAGGGGGACAGAGCCTaGAATGACAAAGGCCAGGAA | + |
Preference number: 2 (lower is better) Translates to: GPTGMQHQKAARRSGAQGQGDRA*NDKGQE Trigger: TTCCTGGCCTTTGTCATTGCAGGCTCTGTCCCCCTG...GCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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3UTR-3UTR CCA 90 bp | CAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCTGTGCACTGTCAGCCAAGGACATaGGGGCCTGCAGATCTCTGC | + |
Preference number: 2 (lower is better) Translates to: QHQKAARRSGAQGRHPVHCQPRT*GPADLC Trigger: GCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACA...GTGCACAGGATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR CCA 90 bp | CTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACTGTCAGCCAAGGACATaGGGGCCTGCAGATCTCTGC | + |
Preference number: 2 (lower is better) Translates to: LQACSTRRLPGGQEHRADCQPRT*GPADLC Trigger: GCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACA...GTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR GCA 90 bp | GCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCTGAAGGTCCTACAGGCATaGAGCACCAGAAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: ACSTRRLPGGQEHRADILKVLQA*STRRLP Trigger: TGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCTT...CAGGATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | TCCAGGGGGACAGAGCCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCTGGAGAAGACATTGGTaGACTCAGCGCAGTGTGGGC | + |
Preference number: 2 (lower is better) Translates to: SRGTEPKKGTPASRASSSWRRHW*TQRSVG Trigger: GCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCA...GGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGCTCTGTCCCCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | CTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 2 (lower is better) Translates to: LQACSTRRLPGGQEHRADLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...GTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR CAA 90 bp | TCCACAAAGACAGGCACCCAGCCATTGTCACACTGGTGCACGGCCTaGCCTTGTGCACGGAGCATGTGTGGTATGCTGGGACCGCACAGG | + |
Preference number: 2 (lower is better) Translates to: STKTGTQPLSHWCTA*PCARSMCGMLGPHR Trigger: CCTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTGACAATGGCTGGGTGCCTGTCTTTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | TCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGAGCCTCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 2 (lower is better) Translates to: SRPSSKLLVSWESRGTEPPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...AGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | TGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCAGATGTCAGCCAAGGACATaGGGGCCTGCAGATCTCTGC | + |
Preference number: 2 (lower is better) Translates to: WPAPVWCGYESSLLTWGRCQPRT*GPADLC Trigger: GCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACA...TCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR CCA 90 bp | GCCGCTGGAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGGTGAAGCCGCTCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 2 (lower is better) Translates to: AAGEDIGALSAVWAGEAALIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...AGCGGCTTCACCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | CACATCCCCAATAGACACCGCCTGTGGTGTGGTGACTACAAGAGCCCCAAGGGGGCACTCAGCGCAGTGTaGGCAGGTGAAGCCGCTCAT | + |
Preference number: 2 (lower is better) Translates to: HIPNRHRLWCGDYKSPKGALSAV*AGEAAH Trigger: ATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGC...CCCCTTGGGGCTCTTGTAGTCACCACACCACAGGCGGTGTCTATTGGGGATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR TCA 90 bp | GTCAGCTCCCGCCTCACATCCCCAATAGACACCGCCTGTGGTGTGGTGACTACAGTCCCAAAACAGTCCTaGGGGCCTCTGCTCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: VSSRLTSPIDTACGVVTTVPKQS*GPLLPK Trigger: CTTTGGGAGCAGAGGCCCTCAGGACTGTTTTGGGAC...TGTAGTCACCACACCACAGGCGGTGTCTATTGGGGATGTGAGGCGGGAGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR TCA 90 bp | CACATCCCCAATAGACACCGCCTGTGGTGTGGTGACTACAAGAGCCCCAAGGGGCGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 2 (lower is better) Translates to: HIPNRHRLWCGDYKSPKGRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...CCCCTTGGGGCTCTTGTAGTCACCACACCACAGGCGGTGTCTATTGGGGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR TCA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCTGGGAAATTCCTGGATaGAGTCACGCCCTTCCTCCA | + |
Preference number: 2 (lower is better) Translates to: HWPAPVWCGYESSLLTWGWEIPG*SHALPP Trigger: TGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCA...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR GCA 90 bp | GAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGGTGAAGCCGCTCATGTTCCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 2 (lower is better) Translates to: EKTLVHSAQCGQVKPLMFPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...GAACATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | GAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGACCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 2 (lower is better) Translates to: EVTPFLQAPGKLGIQGDRPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | GAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGGTGAAGCCGCTCATGTTCGCACTCAGCGCAGTGTaGGCAGGTGAAGCCGCTCAT | + |
Preference number: 2 (lower is better) Translates to: EKTLVHSAQCGQVKPLMFALSAV*AGEAAH Trigger: ATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGC...GAACATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR TCA 90 bp | CACATCCCCAATAGACACCGCCTGTGGTGTGGTGACTACAAGAGCCCCAAGGGGCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 2 (lower is better) Translates to: HIPNRHRLWCGDYKSPKGRSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...CCCCTTGGGGCTCTTGTAGTCACCACACCACAGGCGGTGTCTATTGGGGATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | CCCAATAGACACCGCCTGTGGTGTGGTGACTACAAGAGCCCCAAGGGGCCTGTAAAGGTCCTACAGGCATaGAGCACCAGAAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: PNRHRLWCGDYKSPKGPVKVLQA*STRRLP Trigger: TGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCTT...TACAGGCCCCTTGGGGCTCTTGTAGTCACCACACCACAGGCGGTGTCTATTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | GAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGATGTCAGCCAAGGACATaGGGGCCTGCAGATCTCTGC | + |
Preference number: 2 (lower is better) Translates to: EVTPFLQAPGKLGIQGDRCQPRT*GPADLC Trigger: GCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACA...TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR CCA 90 bp | TCAGTCTCGATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCGCACTCAGCGCAGTGTaGGCAGGTGAAGCCGCTCAT | + |
Preference number: 2 (lower is better) Translates to: SVSMRKHWPAPVWCGYESALSAV*AGEAAH Trigger: ATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGC...GCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR CCA 90 bp | ACAGAGCCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTGCCGCTTTTGGGAAATTCCTaGATGAAGTCACGCCCTTCC | + |
Preference number: 2 (lower is better) Translates to: TEPKKGTPASRASSSPLPLLGNS*MKSRPS Trigger: GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAG...CGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGCTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR TCA 90 bp | CTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCCGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 2 (lower is better) Translates to: LVSAKDMGACRSLHGCNRRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...GCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR TCA 90 bp | TCAGTCTCGATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCCGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 2 (lower is better) Translates to: SVSMRKHWPAPVWCGYESRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...GCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR GCA 90 bp | TCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 2 (lower is better) Translates to: SYRHAAPEGCQAVRSTGQRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...CTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | GAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGACTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 2 (lower is better) Translates to: EVTPFLQAPGKLGIQGDRLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | TGGATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGCGCTGGAGAAGACATTaGTGCACTCAGCGCAGTGTG | + |
Preference number: 2 (lower is better) Translates to: WMKSRPSSKLLVSWESRGRWRRH*CTQRSV Trigger: CACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCG...CCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | CACATCCCCAATAGACACCGCCTGTGGTGTGGTGACTACAAGAGCCCCAAGGGGTCAGTGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 2 (lower is better) Translates to: HIPNRHRLWCGDYKSPKGSVHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGA...CCCCTTGGGGCTCTTGTAGTCACCACACCACAGGCGGTGTCTATTGGGGATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | GAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGATCAGTGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 2 (lower is better) Translates to: EVTPFLQAPGKLGIQGDRSVHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGA...TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR TCA 90 bp | CCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCGTGGGTCAGTCTCGATaGGAAAGCACTGGCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: PVNHSVTKGTQHSMCGSVVGQSR*ESTGQL Trigger: GAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCAC...GACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCTGCTTGTTCCAGACATaGAATGTAGGGGAATCAAGA | + |
Preference number: 2 (lower is better) Translates to: HWPAPVWCGYESSLLTWGCLFQT*NVGESR Trigger: TCTTGATTCCCCTACATTTCATGTCTGGAACAAGCA...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | CTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCTGGGAAATTCCTGGATaGAGTCACGCCCTTCCTCCA | + |
Preference number: 2 (lower is better) Translates to: LVSAKDMGACRSLHGCNRWEIPG*SHALPP Trigger: TGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCA...GCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR CCA 90 bp | AGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTAATTGTCAGCCAAGGACATaGGGGCCTGCAGATCTCTGC | + |
Preference number: 2 (lower is better) Translates to: RTKGLDAGSFLRRGGMFNCQPRT*GPADLC Trigger: GCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACA...ATTAAACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR CCA 90 bp | ACTAGTTTGGTGAAGCTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 2 (lower is better) Translates to: TSLVKLVSAKDMGACRSLLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...CAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAGCTTCACCAAACTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 |
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3UTR CAA 90 bp | AAATTCCTGGATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGAGCCTGCAATGACAAAGGCCAGGAA | + |
Preference number: 2 (lower is better) Translates to: KFLDEVTPFLQAPGK*GIQGDRACNDKGQE Trigger: TTCCTGGCCTTTGTCATTGCAGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCATCCAGGAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | ACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGGTCCCAAAACAGTCCTaGGGGCCTCTGCTCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: TRCAGKPQCHKRHTTQHVVPKQS*GPLLPK Trigger: CTTTGGGAGCAGAGGCCCTCAGGACTGTTTTGGGAC...CACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | AGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCCCAAAACAGTCCTaGGGGCCTCTGCTCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: RCAGKPQCHKRHTTQHVWVPKQS*GPLLPK Trigger: CTTTGGGAGCAGAGGCCCTCAGGACTGTTTTGGGAC...CCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | CATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTCAGGTCCCAAAACAGTCCTaGGGGCCTCTGCTCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: HVLYDPYHLQPSLLTEGQVPKQS*GPLLPK Trigger: CTTTGGGAGCAGAGGCCCTCAGGACTGTTTTGGGAC...CTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR TCA 90 bp | CCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 2 (lower is better) Translates to: PQCHKRHTTQHVWVSLDERSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...CTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR GCA 90 bp | AGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTAATAAGGTCCTACAGGCATaGAGCACCAGAAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: RTKGLDAGSFLRRGGMFNKVLQA*STRRLP Trigger: TGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCTT...ATTAAACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR GCA 90 bp | AGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTAATTGGAGAAGACATTGGTaGACTCAGCGCAGTGTGGGC | + |
Preference number: 2 (lower is better) Translates to: RTKGLDAGSFLRRGGMFNWRRHW*TQRSVG Trigger: GCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCA...ATTAAACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR GCA 90 bp | TCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGAGCCTGTGCGGAATATGCAGTaGTTTTGGGAAATTCCTGGA | + |
Preference number: 2 (lower is better) Translates to: SRPSSKLLVSWESRGTEPVRNMQ*FWEIPG Trigger: TCCAGGAATTTCCCAAAAGCACTGCATATTCCGCAC...AGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | AGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTAATCGCTGGAGAAGACATTaGTGCACTCAGCGCAGTGTG | + |
Preference number: 2 (lower is better) Translates to: RTKGLDAGSFLRRGGMFNRWRRH*CTQRSV Trigger: CACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCG...ATTAAACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR CCA 90 bp | GAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGGTGAAGCCGCTCATGTTCCTTTTGGGAAATTCCTaGATGAAGTCACGCCCTTCC | + |
Preference number: 2 (lower is better) Translates to: EKTLVHSAQCGQVKPLMFLLGNS*MKSRPS Trigger: GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAG...GAACATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR TCA 90 bp | GAATATGCAGTGCTTTTGGGAAATTCCTGGATGAAGTCACGCCCTTCCTCCAAGGTCCCAAAACAGTCCTaGGGGCCTCTGCTCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: EYAVLLGNSWMKSRPSSKVPKQS*GPLLPK Trigger: CTTTGGGAGCAGAGGCCCTCAGGACTGTTTTGGGAC...CTTGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | AGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACGCAGGCTATCCCGTGGGTCAGTCTCGATaGGAAAGCACTGGCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: RLKVKAAIISRNQDAGYPVGQSR*ESTGQL Trigger: GAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCAC...GGGATAGCCTGCGTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | ACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 2 (lower is better) Translates to: TRCAGKPQCHKRHTTQHVRSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...CACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR GCA 90 bp | TGCGGAATATGCAGTGCTTTTGGGAAATTCCTGGATGAAGTCACGCCCTTCCTCAAGGTCCTACAGGCATaGAGCACCAGAAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: CGICSAFGKFLDEVTPFLKVLQA*STRRLP Trigger: TGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCTT...GAGGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTCCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | CATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTCAGCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 2 (lower is better) Translates to: HVLYDPYHLQPSLLTEGQLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...CTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CCA 90 bp | TGCGGAATATGCAGTGCTTTTGGGAAATTCCTGGATGAAGTCACGCCCTTCCTCCGCTGGAGAAGACATTaGTGCACTCAGCGCAGTGTG | + |
Preference number: 2 (lower is better) Translates to: CGICSAFGKFLDEVTPFLRWRRH*CTQRSV Trigger: CACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCG...GAGGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTCCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR TCA 90 bp | GCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGGTGGGTCAGTCTCGATaGGAAAGCACTGGCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: AEFCKVTRCAGKPQCHKRVGQSR*ESTGQL Trigger: GAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCAC...CCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | GGGGCGGTATGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAAGTGGGTCAGTCTCGATaGGAAAGCACTGGCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: GAVCLIAEFCKVTRCAGKVGQSR*ESTGQL Trigger: GAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCAC...TTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACATACCGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR TCA 90 bp | TGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 2 (lower is better) Translates to: CKVTRCAGKPQCHKRHTTRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...TGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR GCA 90 bp | CACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGAATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 2 (lower is better) Translates to: HSVTKGTQHSMCGSVSMRMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...TCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR GCA 90 bp | ACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 2 (lower is better) Translates to: TRCAGKPQCHKRHTTQHVMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...CACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR GCA 90 bp | AGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTAATCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 2 (lower is better) Translates to: RTKGLDAGSFLRRGGMFNRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...ATTAAACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR GCA 90 bp | TCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGAGCCTAAAAAGGGAACTCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 2 (lower is better) Translates to: SKLLVSWESRGTEPKKGTRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...AGTTCCCTTTTTAGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | GTCTTCTTACAGAAGGTCAGCTCCCGCCTCACATCCCCAATAGACACCGCCTGTAAACTGCTTTATCAGTaGATGTTTCTTGGGACCTCT | + |
Preference number: 2 (lower is better) Translates to: VFLQKVSSRLTSPIDTACKLLYQ*MFLGTS Trigger: AGAGGTCCCAAGAAACATGCACTGATAAAGCAGTTT...ACAGGCGGTGTCTATTGGGGATGTGAGGCGGGAGCTGACCTTCTGTAAGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR GCA 90 bp | ATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAAGGTCCTACAGGCATaGAGCACCAGAAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: IAEFCKVTRCAGKPQCHKKVLQA*STRRLP Trigger: TGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCTT...TTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR-3UTR GCA 90 bp | GTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 2 (lower is better) Translates to: VNHSVTKGTQHSMCGSVSRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...CGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
||
3UTR-3UTR TCA 90 bp | ATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAATGGGAAATTCCTGGATaGAGTCACGCCCTTCCTCCA | + |
Preference number: 2 (lower is better) Translates to: IAEFCKVTRCAGKPQCHKWEIPG*SHALPP Trigger: TGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCA...TTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
||
3UTR-3UTR GCA 90 bp | CTAATACTGCTTGTTCCAGACATGAAATGTAGGGGAATCAAGAGTCACCTCGCTATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 2 (lower is better) Translates to: LILLVPDMKCRGIKSHLAMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...AGCGAGGTGACTCTTGATTCCCCTACATTTCATGTCTGGAACAAGCAGTATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
||
3UTR-3UTR GCA 90 bp | GGCTGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 2 (lower is better) Translates to: GWTKAYRLKVKAAIISRNMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...ATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
||
3UTR-3UTR GCA 90 bp | TTACTAATACTGCTTGTTCCAGACATGAAATGTAGGGGAATCAAGAGTCACCTCTGGAGAAGACATTGGTaGACTCAGCGCAGTGTGGGC | + |
Preference number: 2 (lower is better) Translates to: LLILLVPDMKCRGIKSHLWRRHW*TQRSVG Trigger: GCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCA...GAGGTGACTCTTGATTCCCCTACATTTCATGTCTGGAACAAGCAGTATTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
||
3UTR-3UTR GCA 90 bp | TGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGTGCGGAATATGCAGTaGTTTTGGGAAATTCCTGGA | + |
Preference number: 2 (lower is better) Translates to: WTKAYRLKVKAAIISRNQVRNMQ*FWEIPG Trigger: TCCAGGAATTTCCCAAAAGCACTGCATATTCCGCAC...CTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
||
3UTR-3UTR TCA 90 bp | ATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAATGCTTGTTCCAGACATaGAATGTAGGGGAATCAAGA | + |
Preference number: 2 (lower is better) Translates to: IAEFCKVTRCAGKPQCHKCLFQT*NVGESR Trigger: TCTTGATTCCCCTACATTTCATGTCTGGAACAAGCA...TTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
||
3UTR-3UTR GCA 90 bp | TTACTAATACTGCTTGTTCCAGACATGAAATGTAGGGGAATCAAGAGTCACCTCGTGCGGAATATGCAGTaGTTTTGGGAAATTCCTGGA | + |
Preference number: 2 (lower is better) Translates to: LLILLVPDMKCRGIKSHLVRNMQ*FWEIPG Trigger: TCCAGGAATTTCCCAAAAGCACTGCATATTCCGCAC...GAGGTGACTCTTGATTCCCCTACATTTCATGTCTGGAACAAGCAGTATTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
||
3UTR GCA 72 bp | AGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGGTGCACTCAGCGCAGT | + |
Preference number: 3 (lower is better) Translates to: RELQPAGPAPPH*RWRRHWCTQRS Trigger: ACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCCCGCTGGAGAAGACATaGGTGCACTCAGCGCAGTGT | + |
Preference number: 3 (lower is better) Translates to: HWPAPVWCGYESSLLTWGPLEKT*VHSAQC Trigger: ACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGG...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
||
3UTR-3UTR CAA 90 bp | CCCAATAGACACCGCCTGTGGTGTGGTGACTACAAGAGCCCCAAGGGGCCTGTACACTGGTGCACGGCCTaGCCTTGTGCACGGAGCATG | + |
Preference number: 3 (lower is better) Translates to: PNRHRLWCGDYKSPKGPVHWCTA*PCARSM Trigger: CATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTG...TACAGGCCCCTTGGGGCTCTTGTAGTCACCACACCACAGGCGGTGTCTATTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR GCA 72 bp | CCAGCCATTGTCACACTGGTGCACGGCCTTGCCTTGTaGACGGAGCATGTGTGGTATGCTGGGACCGCACAG | + |
Preference number: 3 (lower is better) Translates to: PAIVTLVHGLAL*TEHVWYAGTAQ Trigger: CTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTGACAATGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR GCA 72 bp | CAGGCACCCAGCCATTGTCACACTGGTGCACGGCCTTaGCTTGTGCACGGAGCATGTGTGGTATGCTGGGAC | + |
Preference number: 3 (lower is better) Translates to: QAPSHCHTGARP*LVHGACVVCWD Trigger: GTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTGACAATGGCTGGGTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | ACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTCAGCTCCCGCCTCACAGTGCACGGCCTTGCCTaGTGCACGGAGCATGTGTGG | + |
Preference number: 3 (lower is better) Translates to: TPITCSPVFLQKVSSRLTVHGLA*CTEHVW Trigger: CCACACATGCTCCGTGCACAAGGCAAGGCCGTGCAC...TGTGAGGCGGGAGCTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | AGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGA | + |
Preference number: 3 (lower is better) Translates to: SHLAEDKGLGCWVLPKTGQAPGK*GIQGDR Trigger: TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTG...CCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR TCA 72 bp | CAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTaGCCTGGGGCAGAAGTGACTAGGGCTGGACGAAAG | + |
Preference number: 3 (lower is better) Translates to: QLLCGVAMRAAC*PGAEVTRAGRK Trigger: CTTTCGTCCAGCCCTAGTCACTTCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR GCA 72 bp | TCCACAAAGACAGGCACCCAGCCATTGTCACACTGGTaGACGGCCTTGCCTTGTGCACGGAGCATGTGTGGT | + |
Preference number: 3 (lower is better) Translates to: STKTGTQPLSHW*TALPCARSMCG Trigger: ACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTGACAATGGCTGGGTGCCTGTCTTTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR CCA 72 bp | CACAGCATGTGTGGGTCAGTCTCGATGAGAAAGCACTaGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGC | + |
Preference number: 3 (lower is better) Translates to: HSMCGSVSMRKH*PAPVWCGYESS Trigger: GCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCACACATGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR CCA 72 bp | GGCTTCCATAGTGGCCATGTGCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAGATAATCCAGCTGCCC | + |
Preference number: 3 (lower is better) Translates to: GFHSGHVLIRGP*RCVHNQIIQLP Trigger: GGGCAGCTGGATTATCTGGTTGTGGACACACCTCCAGGGACCTCTGATGAGCACATGGCCACTATGGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | ACTAGTTTGGTGAAGCTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCCGCTGGAGAAGACATaGGTGCACTCAGCGCAGTGT | + |
Preference number: 3 (lower is better) Translates to: TSLVKLVSAKDMGACRSLPLEKT*VHSAQC Trigger: ACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGG...CAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAGCTTCACCAAACTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR-3UTR CAA 90 bp | CAGGCCACGTCAGACACAAACTGCTTTATCAGTGCATGTTTCTTGGGACCTCTCGTGCACGGCCTTGCCTaGTGCACGGAGCATGTGTGG | + |
Preference number: 3 (lower is better) Translates to: QATSDTNCFISACFLGPLVHGLA*CTEHVW Trigger: CCACACATGCTCCGTGCACAAGGCAAGGCCGTGCAC...GAGAGGTCCCAAGAAACATGCACTGATAAAGCAGTTTGTGTCTGACGTGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | GAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGGTGAAGCCGCTCATGTTCATCAGTGCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 3 (lower is better) Translates to: EKTLVHSAQCGQVKPLMFISACF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGAT...GAACATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR GCA 72 bp | GTGAAGCCGCTCATGTTCTCTATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAGAAGGTCAGCTCCCGC | + |
Preference number: 3 (lower is better) Translates to: VKPLMFSMTPIT*SPVFLQKVSSR Trigger: GCGGGAGCTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCGGCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | AGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTAATCCGCTGGAGAAGACATaGGTGCACTCAGCGCAGTGT | + |
Preference number: 3 (lower is better) Translates to: RTKGLDAGSFLRRGGMFNPLEKT*VHSAQC Trigger: ACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGG...ATTAAACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 |
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3UTR TCA 72 bp | AGGAACCCCACAGACATAAGGGAGATGCTCTGCTCCTaGTCCACAAAGACAGGCACCCAGCCATTGTCACAC | + |
Preference number: 3 (lower is better) Translates to: RNPTDIREMLCS*STKTGTQPLSH Trigger: GTGTGACAATGGCTGGGTGCCTGTCTTTGTGGATCAGGAGCAGAGCATCTCCCTTATGTCTGTGGGGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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3UTR GCA 72 bp | AACAACTACAGGTCCCAAAACAGTCCTGAGGGCCTCTaGTCCCAAAGGTCCTACAGGCATGCAGCACCAGAA | + |
Preference number: 3 (lower is better) Translates to: NNYRSQNSPEGL*SQRSYRHAAPE Trigger: TTCTGGTGCTGCATGCCTGTAGGACCTTTGGGAGCAGAGGCCCTCAGGACTGTTTTGGGACCTGTAGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234583.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR CCA 72 bp | CCACAGTGTCACAAAAGGCACACAACACAGCATGTGTaGGTCAGTCTCGATGAGAAAGCACTGGCCAGCTCC | + |
Preference number: 3 (lower is better) Translates to: PQCHKRHTTQHV*VSLDEKALASS Trigger: GGAGCTGGCCAGTGCTTTCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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3UTR CCA 72 bp | ATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTaGGAATCCAGGGGGACAGAGCCTGCAATGACAAAG | + |
Preference number: 3 (lower is better) Translates to: MKSRPSSKLLVS*ESRGTEPAMTK Trigger: CTTTGTCATTGCAGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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3UTR CCA 72 bp | ATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTaGGAATCCAGGGGGACAGAGCCTAAAAAGGGAACT | + |
Preference number: 3 (lower is better) Translates to: MKSRPSSKLLVS*ESRGTEPKKGT Trigger: AGTTCCCTTTTTAGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | GTAGGGGAATCAAGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCGAATATGCAGTGCTTTaGGGAAATTCCTGGATGAAG | + |
Preference number: 3 (lower is better) Translates to: VGESRVTSLRTKGLDAGSEYAVL*GNSWMK Trigger: CTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC...GGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCTTGATTCCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR CCA 72 bp | GTGAGTGCGGAATATGCAGTGCTTTTGGGAAATTCCTaGATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTA | + |
Preference number: 3 (lower is better) Translates to: VSAEYAVLLGNS*MKSRPSSKLLV Trigger: TACCAGGAGCTTGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTCCGCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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3UTR GCA 72 bp | CACAACTCTCTGGGCTATGGACGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTCCTGGATGAAGTCACG | + |
Preference number: 3 (lower is better) Translates to: HNSLGYGRECGI*SAFGKFLDEVT Trigger: CGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTCCGCACTCACGTCCATAGCCCAGAGAGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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3UTR-3UTR CAA 90 bp | TTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACACAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGA | + |
Preference number: 3 (lower is better) Translates to: FCKVTRCAGKPQCHKRHTQAPGK*GIQGDR Trigger: TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTG...TGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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3UTR-3UTR CAA 90 bp | GGCTGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATGAATATGCAGTGCTTTaGGGAAATTCCTGGATGAAG | + |
Preference number: 3 (lower is better) Translates to: GWTKAYRLKVKAAIISRNEYAVL*GNSWMK Trigger: CTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC...ATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | CAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCCCACCTTCTTGCCCTaGTGGCGCAGAGCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: QACSTRRLPGGQEHRADIPTFLP*WRRARA Trigger: GGCCCTGGCTCTGCGCCACCAGGGCAAGAAGGTGGG...GATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | ACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCCACCTTCTTGCCCTaGTGGCGCAGAGCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: TGMQHQKAARRSGAQGRHPTFLP*WRRARA Trigger: GGCCCTGGCTCTGCGCCACCAGGGCAAGAAGGTGGG...ATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | GGTCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCGGATTCCCACCTTCTTaGCCTGGTGGCGCAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: GPTGMQHQKAARRSGAQGGFPPS*PGGAEP Trigger: TGGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCC...GCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | CAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCTGCTTCTTGCCCTGGTaGCGCAGAGCCAGGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: QACSTRRLPGGQEHRADICFLPW*RRARAN Trigger: GTTGGCCCTGGCTCTGCGCCACCAGGGCAAGAAGCA...GATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000235055.2 |
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CDS-3UTR TCA 90 bp | CAGAGCCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTGCCGCGTTCCCGGGTTCTGGTaGGAAACAGGAGTTGGGGTG | + |
Preference number: 4 (lower is better) Translates to: QSLKRELQPAGPAPPHCRVPGFW*ETGVGV Trigger: CACCCCAACTCCTGTTTCTCACCAGAACCCGGGAAC...GCGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000234261.2 ENSMUST00000234579.2 |
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CDS-3UTR CCA 90 bp | ACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATTGCTTCTTGCCCTGGTaGCGCAGAGCCAGGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: TGMQHQKAARRSGAQGRHCFLPW*RRARAN Trigger: GTTGGCCCTGGCTCTGCGCCACCAGGGCAAGAAGCA...ATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000235055.2 |
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CDS-3UTR GCA 90 bp | AAGGTCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGGATTCCCACCTTCTTaGCCTGGTGGCGCAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: KVLQACSTRRLPGGQEHRGFPPS*PGGAEP Trigger: TGGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCC...CCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | TACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACAGGATTCCCACCTTCTTaGCCTGGTGGCGCAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: YRHAAPEGCQAVRSTGQTGFPPS*PGGAEP Trigger: TGGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCC...TGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 4 (lower is better) Translates to: HWPAPVWCGYESSLLTWGPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AAGGTCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 4 (lower is better) Translates to: KVLQACSTRRLPGGQEHRPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...CCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GTAGGGGAATCAAGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCCCCACCTTCTTGCCCTaGTGGCGCAGAGCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: VGESRVTSLRTKGLDAGSPTFLP*WRRARA Trigger: GGCCCTGGCTCTGCGCCACCAGGGCAAGAAGGTGGG...GGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCTTGATTCCCCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | ACAGAGCCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTGCCGCCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: TEPKKGTPASRASSSPLPPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...CGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGCTCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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CDS-3UTR CCA 90 bp | CAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: QACSTRRLPGGQEHRADIPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...GATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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CDS-3UTR CCA 90 bp | TCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 4 (lower is better) Translates to: SYRHAAPEGCQAVRSTGQLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...CTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGCGCTGGAGAAGACATTaGTGCACTCAGCGCAGTGTG | + |
Preference number: 4 (lower is better) Translates to: SYRHAAPEGCQAVRSTGQRWRRH*CTQRSV Trigger: CACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCG...CTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | CAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCTGTGCACTGGGAAATTCCTGGATaGAGTCACGCCCTTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: QHQKAARRSGAQGRHPVHWEIPG*SHALPP Trigger: TGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCA...GTGCACAGGATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234598.2 |
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CDS-3UTR CCA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCCCAACTCCGTGGAGATaGTGCTTTTCCCAACGCCAC | + |
Preference number: 4 (lower is better) Translates to: HWPAPVWCGYESSLLTWGPTPWR*CFSQRH Trigger: GTGGCGTTGGGAAAAGCACCATCTCCACGGAGTTGG...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCCCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: HWPAPVWCGYESSLLTWGPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | CCCAGTCTTCTTACAGAAGGTCAGCTCCCGCCTCACATCCCCAATAGACACCGCTGCTTCTTGCCCTGGTaGCGCAGAGCCAGGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: PSLLTEGQLPPHIPNRHRCFLPW*RRARAN Trigger: GTTGGCCCTGGCTCTGCGCCACCAGGGCAAGAAGCA...GCGGTGTCTATTGGGGATGTGAGGCGGGAGCTGACCTTCTGTAAGAAGACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000235055.2 |
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3UTR CAA 72 bp | ACAGGCACCCAGCCATTGTCACACTGGTGCACGGCCTaGCCTTGTGCACGGAGCATGTGTGGTATGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: TGTQPLSHWCTA*PCARSMCGMLG Trigger: TCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTGACAATGGCTGGGTGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234579.2 ENSMUST00000235055.2 |
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CDS-3UTR GCA 90 bp | AGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGATTCCCACCTTCTTaGCCTGGTGGCGCAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: RVTSLRTKGLDAGSFLRRGFPPS*PGGAEP Trigger: TGGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCC...CCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AGGTCCTACAGGCATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 4 (lower is better) Translates to: RSYRHAAPEGCQAVRSTGMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...CCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCATGCCTGTAGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | GAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGACTGCAAGGAGGAGGATaGTTCTTGCCCTGGTGGCGC | + |
Preference number: 4 (lower is better) Translates to: EVTPFLQAPGKLGIQGDRLQGGG*FLPWWR Trigger: GCGCCACCAGGGCAAGAAGCATCCTCCTCCTTGCAG...TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235055.2 |
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CDS-3UTR CCA 90 bp | GATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGCCCACCTTCTTGCCCTaGTGGCGCAGAGCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: DVPVNHSVTKGTQHSMCGPTFLP*WRRARA Trigger: GGCCCTGGCTCTGCGCCACCAGGGCAAGAAGGTGGG...CCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCAGACTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 4 (lower is better) Translates to: WPAPVWCGYESSLLTWGRLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...TCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | AGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGCACTCAGCGCAGTGTaGGCAGGTGAAGCCGCTCAT | + |
Preference number: 4 (lower is better) Translates to: RVTSLRTKGLDAGSFLRRALSAV*AGEAAH Trigger: ATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGC...CCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | TCACGCCCTTCCTCCAAGCTCCTGGTAAGTTGGGAATCCAGGGGGACAGAGCCTACTCCGTGGAGATGGTaGTTTTCCCAACGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: SRPSSKLLVSWESRGTEPTPWRW*FSQRHP Trigger: AGGGTGGCGTTGGGAAAAGCACCATCTCCACGGAGT...AGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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CDS-3UTR GCA 90 bp | TCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGACTCCGTGGAGATGGTaGTTTTCCCAACGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: SLRTKGLDAGSFLRRGGMTPWRW*FSQRHP Trigger: AGGGTGGCGTTGGGAAAAGCACCATCTCCACGGAGT...CATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGTGGAGAAGACATTGGTaGACTCAGCGCAGTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: SHLAEDKGLGCWVLPKTGWRRHW*TQRSVG Trigger: GCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCA...CCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | ACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTTCAGTGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 4 (lower is better) Translates to: TSLRTKGLDAGSFLRRGGSVHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGA...ACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCAGAAGTGACCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 4 (lower is better) Translates to: APVWCGYESSLLTWGRSDLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...GTCACTTCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCATAGTCCAGGCACTCAGCGCAGTGTaGGCAGGTGAAGCCGCTCAT | + |
Preference number: 4 (lower is better) Translates to: AKDMGACRSLHGCNRIVQALSAV*AGEAAH Trigger: ATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGC...CTGGACTATGCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | GTCTTCTTACAGAAGGTCAGCTCCCGCCTCACATCCCCAATAGACACCGCCTGTGTTCCCGGGTTCTGGTaGGAAACAGGAGTTGGGGTG | + |
Preference number: 4 (lower is better) Translates to: VFLQKVSSRLTSPIDTACVPGFW*ETGVGV Trigger: CACCCCAACTCCTGTTTCTCACCAGAACCCGGGAAC...ACAGGCGGTGTCTATTGGGGATGTGAGGCGGGAGCTGACCTTCTGTAAGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234261.2 ENSMUST00000234579.2 |
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CDS-3UTR GCA 90 bp | GCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTGGAGAAGACATTGGTaGACTCAGCGCAGTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: AEDKGLGCWVLPKTGRYVWRRHW*TQRSVG Trigger: GCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCA...AACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | CCCAATAGACACCGCCTGTGGTGTGGTGACTACAAGAGCCCCAAGGGGCCTGTATTTATCAGTGCTTCTTaGCCTGGTGGCGCAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: PNRHRLWCGDYKSPKGPVFISAS*PGGAEP Trigger: TGGCTCTGCGCCACCAGGGCAAGAAGCACTGATAAA...TACAGGCCCCTTGGGGCTCTTGTAGTCACCACACCACAGGCGGTGTCTATTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234261.2 |
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CDS-3UTR CCA 90 bp | AGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGCCAACTCCGTGGAGATaGTGCTTTTCCCAACGCCAC | + |
Preference number: 4 (lower is better) Translates to: RVTSLRTKGLDAGSFLRRPTPWR*CFSQRH Trigger: GTGGCGTTGGGAAAAGCACCATCTCCACGGAGTTGG...CCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGGTGAAGCCGCTCATGTTCCCAACTCCGTGGAGATaGTGCTTTTCCCAACGCCAC | + |
Preference number: 4 (lower is better) Translates to: EKTLVHSAQCGQVKPLMFPTPWR*CFSQRH Trigger: GTGGCGTTGGGAAAAGCACCATCTCCACGGAGTTGG...GAACATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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CDS-3UTR TCA 90 bp | GGAATCAAGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: GIKSHLAEDKGLGCWVLPRSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...AGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCTTGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | ATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: MRKHWPAPVWCGYESSLLRSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...CAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | ATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGTGGAGAAGACATTGGTaGACTCAGCGCAGTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: MRKHWPAPVWCGYESSLLWRRHW*TQRSVG Trigger: GCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCA...CAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | ATGCAGCACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCTGTGAAACTGCTTTATCAGTaGTGCAAAGACCCCAAAGCC | + |
Preference number: 4 (lower is better) Translates to: MQHQKAARRSGAQGRHPVKLLYQ*CKDPKA Trigger: GGCTTTGGGGTCTTTGCAGCACTGATAAAGCAGTTT...CACAGGATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGTGCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234489.2 |
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CDS-3UTR CCA 90 bp | GTCTCGATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCTCAGTGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 4 (lower is better) Translates to: VSMRKHWPAPVWCGYESSSVHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGA...GCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | ACCAGAAGGCTGCCAGGCGGTCAGGAGCACAGGGCAGACATCCTGTGCACAACTCTTTTGGGAAATTCCTaGATGAAGTCACGCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: TRRLPGGQEHRADILCTTLLGNS*MKSRPS Trigger: GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAG...AGTTGTGCACAGGATGTCTGCCCTGTGCTCCTGACCGCCTGGCAGCCTTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234598.2 |
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CDS-3UTR CCA 90 bp | CATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTCAGTGCTTCTTGCCCTGGTaGCGCAGAGCCAGGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: HVLYDPYHLQPSLLTEGQCFLPW*RRARAN Trigger: GTTGGCCCTGGCTCTGCGCCACCAGGGCAAGAAGCA...CTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000235055.2 |
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CDS-3UTR TCA 90 bp | AGTTTGGTGAAGCTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGAGATGCTCTGCTCCTaGTCCACAAAGACAGGCACC | + |
Preference number: 4 (lower is better) Translates to: SLVKLVSAKDMGACRSLHEMLCS*STKTGT Trigger: GGTGCCTGTCTTTGTGGATCAGGAGCAGAGCATCTC...ATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAGCTTCACCAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | ATCAAGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: IKSHLAEDKGLGCWVLPKRSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...CTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | ACTAGTTTGGTGAAGCTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: TSLVKLVSAKDMGACRSLRSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...CAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAGCTTCACCAAACTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 4 (lower is better) Translates to: RVTSLRTKGLDAGSFLRRMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...CCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | GTCTCGATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 4 (lower is better) Translates to: VSMRKHWPAPVWCGYESSMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...GCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | ACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTGTGCGGAATATGCAGTaGTTTTGGGAAATTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: TSLRTKGLDAGSFLRRGGVRNMQ*FWEIPG Trigger: TCCAGGAATTTCCCAAAAGCACTGCATATTCCGCAC...ACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR GCA 90 bp | ATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTCAGCGAGGAGGATGCTTCTTaGCCTGGTGGCGCAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: MFSMTPITCSPVFLQKVSEEDAS*PGGAEP Trigger: TGGCTCTGCGCCACCAGGGCAAGAAGCATCCTCCTC...GCTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235055.2 |
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CDS-3UTR CCA 90 bp | AATGTAGGGGAATCAAGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 4 (lower is better) Translates to: NVGESRVTSLRTKGLDAGLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...CCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCTTGATTCCCCTACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCATAGTCCTCATCAGAGGTCCCTaGAGGTGTGTCCACAACCAG | + |
Preference number: 4 (lower is better) Translates to: SAKDMGACRSLHGCNRIVLIRGP*RCVHNQ Trigger: CTGGTTGTGGACACACCTCCAGGGACCTCTGATGAG...GACTATGCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | ACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGGCACTCAGCGCAGTGTaGGCAGGTGAAGCCGCTCAT | + |
Preference number: 4 (lower is better) Translates to: TRCAGKPQCHKRHTTQHVALSAV*AGEAAH Trigger: ATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGC...CACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCATAGTCCGCTGGAGAAGACATTaGTGCACTCAGCGCAGTGTG | + |
Preference number: 4 (lower is better) Translates to: SAKDMGACRSLHGCNRIVRWRRH*CTQRSV Trigger: CACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCG...GACTATGCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCAGAAGTGACCTTTTGGGAAATTCCTaGATGAAGTCACGCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: APVWCGYESSLLTWGRSDLLGNS*MKSRPS Trigger: GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAG...GTCACTTCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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3UTR CAA 72 bp | GATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGAGCCTGCAATGACAAA | + |
Preference number: 4 (lower is better) Translates to: DEVTPFLQAPGK*GIQGDRACNDK Trigger: TTTGTCATTGCAGGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | CCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTCGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: PDVPVNHSVTKGTQHSMCRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...ACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | TTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 4 (lower is better) Translates to: LPDVPVNHSVTKGTQHSMPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...CATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | GCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCAGAAGTGACCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 4 (lower is better) Translates to: APVWCGYESSLLTWGRSDRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...GTCACTTCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR TCA 90 bp | CATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTCAGGAGATGCTCTGCTCCTaGTCCACAAAGACAGGCACC | + |
Preference number: 4 (lower is better) Translates to: HVLYDPYHLQPSLLTEGQEMLCS*STKTGT Trigger: GGTGCCTGTCTTTGTGGATCAGGAGCAGAGCATCTC...CTGACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234489.2 ENSMUST00000234674.2 |
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CDS-3UTR TCA 90 bp | ACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGGAGATGCTCTGCTCCTaGTCCACAAAGACAGGCACC | + |
Preference number: 4 (lower is better) Translates to: TRCAGKPQCHKRHTTQHVEMLCS*STKTGT Trigger: GGTGCCTGTCTTTGTGGATCAGGAGCAGAGCATCTC...CACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | CAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGAAACGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: QCHKRHTTQHVWVSLDEKRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...TTTCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AGTGCGGAATATGCAGTGCTTTTGGGAAATTCCTGGATGAAGTCACGCCCTTCCACTCCGTGGAGATGGTaGTTTTCCCAACGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: SAEYAVLLGNSWMKSRPSTPWRW*FSQRHP Trigger: AGGGTGGCGTTGGGAAAAGCACCATCTCCACGGAGT...GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTCCGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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CDS-3UTR GCA 90 bp | GCTCATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTACTCCGTGGAGATGGTaGTTTTCCCAACGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: AHVLYDPYHLQPSLLTEGTPWRW*FSQRHP Trigger: AGGGTGGCGTTGGGAAAAGCACCATCTCCACGGAGT...ACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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CDS-3UTR GCA 90 bp | GCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTGTGCGGAATATGCAGTaGTTTTGGGAAATTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: AEDKGLGCWVLPKTGRYVVRNMQ*FWEIPG Trigger: TCCAGGAATTTCCCAAAAGCACTGCATATTCCGCAC...AACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CCA 90 bp | CTCATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTCCCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: LMFSMTPITCSPVFLQKVPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...GACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000235055.2 |
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CDS-3UTR CCA 90 bp | CCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGTCAGTGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 4 (lower is better) Translates to: PQCHKRHTTQHVWVSLDESVHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGA...CTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | AGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTTAATTCAGTGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 4 (lower is better) Translates to: RTKGLDAGSFLRRGGMFNSVHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGA...ATTAAACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 4 (lower is better) Translates to: DVPVNHSVTKGTQHSMCGSVHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGA...CCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCATAGTCCAGCTTTTGGGAAATTCCTaGATGAAGTCACGCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: AKDMGACRSLHGCNRIVQLLGNS*MKSRPS Trigger: GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAG...CTGGACTATGCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR TCA 90 bp | GAATATGCAGTGCTTTTGGGAAATTCCTGGATGAAGTCACGCCCTTCCTCCAAGGAGATGCTCTGCTCCTaGTCCACAAAGACAGGCACC | + |
Preference number: 4 (lower is better) Translates to: EYAVLLGNSWMKSRPSSKEMLCS*STKTGT Trigger: GGTGCCTGTCTTTGTGGATCAGGAGCAGAGCATCTC...CTTGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234489.2 ENSMUST00000234674.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | CACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGATGGGAAATTCCTGGATaGAGTCACGCCCTTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: HSVTKGTQHSMCGSVSMRWEIPG*SHALPP Trigger: TGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCA...TCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CCA 90 bp | GCTCATGTTCTCTATGACCCCTATCACCTGCAGCCCAGTCTTCTTACAGAAGGTATCCAGCATGTTTCTTaGGACCTCTCCACACCACGG | + |
Preference number: 4 (lower is better) Translates to: AHVLYDPYHLQPSLLTEGIQHVS*DLSTPR Trigger: CCGTGGTGTGGAGAGGTCCCAAGAAACATGCTGGAT...ACCTTCTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCATAGAGAACATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234674.2 |
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CDS-3UTR TCA 90 bp | AGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACGCAGGCTATCCCTGGGAAATTCCTGGATaGAGTCACGCCCTTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: RLKVKAAIISRNQDAGYPWEIPG*SHALPP Trigger: TGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCA...GGGATAGCCTGCGTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR GCA 90 bp | ACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGG | + |
Preference number: 4 (lower is better) Translates to: TKAYRLKVKAAIISRNQDPAPPH*RWRRHW Trigger: CCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGG...GTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AGTTTGGTGAAGCTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 4 (lower is better) Translates to: SLVKLVSAKDMGACRSLHRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...ATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAGCTTCACCAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CCA 90 bp | GCGGTATGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCAGCACTCAGCGCAGTGTaGGCAGGTGAAGCCGCTCAT | + |
Preference number: 4 (lower is better) Translates to: AVCLIAEFCKVTRCAGKPALSAV*AGEAAH Trigger: ATGAGCGGCTTCACCTGCCCACACTGCGCTGAGTGC...TGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACATACCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | GGGGCGGTATGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAAGAGATGCTCTGCTCCTaGTCCACAAAGACAGGCACC | + |
Preference number: 4 (lower is better) Translates to: GAVCLIAEFCKVTRCAGKEMLCS*STKTGT Trigger: GGTGCCTGTCTTTGTGGATCAGGAGCAGAGCATCTC...TTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACATACCGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234674.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | TATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACGCAGGCTATCGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: YRLKVKAAIISRNQDAGYRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...ATAGCCTGCGTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | GCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCATAGTCCAGACGTCAGACACAAACTaGTTTATCAGTGCATGTTTC | + |
Preference number: 4 (lower is better) Translates to: AKDMGACRSLHGCNRIVQTSDTN*FISACF Trigger: GAAACATGCACTGATAAAGCAGTTTGTGTCTGACGT...CTGGACTATGCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | TTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 4 (lower is better) Translates to: LPDVPVNHSVTKGTQHSMMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...CATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | CAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGAAAATGACCCCTATCACCTaGAGCCCAGTCTTCTTACAG | + |
Preference number: 4 (lower is better) Translates to: QCHKRHTTQHVWVSLDEKMTPIT*SPVFLQ Trigger: CTGTAAGAAGACTGGGCTGCAGGTGATAGGGGTCAT...TTTCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | CTAATACTGCTTGTTCCAGACATGAAATGTAGGGGAATCAAGAGTCACCTCGCTCCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: LILLVPDMKCRGIKSHLAPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...AGCGAGGTGACTCTTGATTCCCCTACATTTCATGTCTGGAACAAGCAGTATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GGGGCGGTATGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: GAVCLIAEFCKVTRCAGKPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...TTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACATACCGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GGCTGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCGCTGGAGAAGACATTaGTGCACTCAGCGCAGTGTG | + |
Preference number: 4 (lower is better) Translates to: GWTKAYRLKVKAAIISRNRWRRH*CTQRSV Trigger: CACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCG...ATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | TTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACCGCTCATGTTCTCTATaGCCCCTATCACCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: LIAEFCKVTRCAGKPQCHRSCSL*PLSPAA Trigger: GGCTGCAGGTGATAGGGGTCATAGAGAACATGAGCG...GTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | TGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCGCAGTGTGGGCAGGTaGAGCCGCTCATGTTCTCTA | + |
Preference number: 4 (lower is better) Translates to: CLIAEFCKVTRCAGKPQCRSVGR*SRSCSL Trigger: TAGAGAACATGAGCGGCTTCACCTGCCCACACTGCG...ACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | ATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAACTCCGTGGAGATGGTaGTTTTCCCAACGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: IAEFCKVTRCAGKPQCHKTPWRW*FSQRHP Trigger: AGGGTGGCGTTGGGAAAAGCACCATCTCCACGGAGT...TTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | GTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCATAACGTCAGACACAAACTaGTTTATCAGTGCATGTTTC | + |
Preference number: 4 (lower is better) Translates to: VSAKDMGACRSLHGCNRITSDTN*FISACF Trigger: GAAACATGCACTGATAAAGCAGTTTGTGTCTGACGT...TATGCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | TGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGTGGAGAAGACATTGGTaGACTCAGCGCAGTGTGGGC | + |
Preference number: 4 (lower is better) Translates to: WTKAYRLKVKAAIISRNQWRRHW*TQRSVG Trigger: GCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCA...CTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGCCAACTCCGTGGAGATaGTGCTTTTCCCAACGCCAC | + |
Preference number: 4 (lower is better) Translates to: WTKAYRLKVKAAIISRNQPTPWR*CFSQRH Trigger: GTGGCGTTGGGAAAAGCACCATCTCCACGGAGTTGG...CTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACGCAGGCTATCCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: YRLKVKAAIISRNQDAGYPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...ATAGCCTGCGTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACCGCTGGAGAAGACATTaGTGCACTCAGCGCAGTGTG | + |
Preference number: 4 (lower is better) Translates to: LIAEFCKVTRCAGKPQCHRWRRH*CTQRSV Trigger: CACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCG...GTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | GTATGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGCCAACTCCGTGGAGATaGTGCTTTTCCCAACGCCAC | + |
Preference number: 4 (lower is better) Translates to: VCLIAEFCKVTRCAGKPQPTPWR*CFSQRH Trigger: GTGGCGTTGGGAAAAGCACCATCTCCACGGAGTTGG...CTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCCAGGGCCAACTCCGTaGAGATGGTGCTTTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: CLIAEFCKVTRCAGKPQCPGPTP*RWCFSQ Trigger: TTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGG...ACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR TCA 90 bp | TTACTAATACTGCTTGTTCCAGACATGAAATGTAGGGGAATCAAGAGTCACCTCTGGGAAATTCCTGGATaGAGTCACGCCCTTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: LLILLVPDMKCRGIKSHLWEIPG*SHALPP Trigger: TGGAGGAAGGGCGTGACTTCATCCAGGAATTTCCCA...GAGGTGACTCTTGATTCCCCTACATTTCATGTCTGGAACAAGCAGTATTAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR GCA 90 bp | CCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTAAACTGCTTTATCAGTaGATGTTTCTTGGGACCTCT | + |
Preference number: 4 (lower is better) Translates to: PDVPVNHSVTKGTQHSMCKLLYQ*MFLGTS Trigger: AGAGGTCCCAAGAAACATGCACTGATAAAGCAGTTT...ACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGACGTCAGACACAAACTaGTTTATCAGTGCATGTTTC | + |
Preference number: 4 (lower is better) Translates to: RCAGKPQCHKRHTTQHVWTSDTN*FISACF Trigger: GAAACATGCACTGATAAAGCAGTTTGTGTCTGACGT...CCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | AGTGCGGAATATGCAGTGCTTTTGGGAAATTCCTGGATGAAGTCACGCCCTTCCACGTCAGACACAAACTaGTTTATCAGTGCATGTTTC | + |
Preference number: 4 (lower is better) Translates to: SAEYAVLLGNSWMKSRPSTSDTN*FISACF Trigger: GAAACATGCACTGATAAAGCAGTTTGTGTCTGACGT...GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAGCACTGCATATTCCGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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CDS-3UTR CCA 90 bp | TGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACTTTTGGGAAATTCCTaGATGAAGTCACGCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: CKVTRCAGKPQCHKRHTTLLGNS*MKSRPS Trigger: GGAAGGGCGTGACTTCATCCAGGAATTTCCCAAAAG...TGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR GCA 90 bp | TGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACAGTGCGGAATATGCAGTaGTTTTGGGAAATTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: CKVTRCAGKPQCHKRHTTVRNMQ*FWEIPG Trigger: TCCAGGAATTTCCCAAAAGCACTGCATATTCCGCAC...TGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR GCA 90 bp | GGCTGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 4 (lower is better) Translates to: GWTKAYRLKVKAAIISRNRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...ATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR GCA 90 bp | TGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACAAAACTGCTTTATCAGTaGATGTTTCTTGGGACCTCT | + |
Preference number: 4 (lower is better) Translates to: CKVTRCAGKPQCHKRHTTKLLYQ*MFLGTS Trigger: AGAGGTCCCAAGAAACATGCACTGATAAAGCAGTTT...TGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | TTACTAATACTGCTTGTTCCAGACATGAAATGTAGGGGAATCAAGAGTCACCTCCGTGAGTGCGGAATATaGAGTGCTTTTGGGAAATTC | + |
Preference number: 4 (lower is better) Translates to: LLILLVPDMKCRGIKSHLRECGI*SAFGKF Trigger: GAATTTCCCAAAAGCACTGCATATTCCGCACTCACG...GAGGTGACTCTTGATTCCCCTACATTTCATGTCTGGAACAAGCAGTATTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR GCA 90 bp | ACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACAAACTGCTTTATCAGTaGATGTTTCTTGGGACCTCT | + |
Preference number: 4 (lower is better) Translates to: TKAYRLKVKAAIISRNQDKLLYQ*MFLGTS Trigger: AGAGGTCCCAAGAAACATGCACTGATAAAGCAGTTT...GTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR GCA 90 bp | TGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTAAACTGCTTTATCAGTaGATGTTTCTTGGGACCTCT | + |
Preference number: 4 (lower is better) Translates to: CLIAEFCKVTRCAGKPQCKLLYQ*MFLGTS Trigger: AGAGGTCCCAAGAAACATGCACTGATAAAGCAGTTT...ACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS GCA 90 bp | GACCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTaGCGCTGGAGAAGACATTGGTGCACTCAGCGCAGTGTGGGCAGG | + |
Preference number: 5 (lower is better) Translates to: DLKRELQPAGPAPPH*RWRRHWCTQRSVGR Trigger: CCTGCCCACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGCACTGGTGCACGGCCTaGCCTTGTGCACGGAGCATG | + |
Preference number: 5 (lower is better) Translates to: HLAEDKGLGCWVLPKTGRHWCTA*PCARSM Trigger: CATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTG...CCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS TCA 90 bp | AACAAGGATGATGTGTCGCACCCCGGCCAGGTTCCCGGGTTCTGGTaGGAAACAGGAGTTGGGGTGTCTGCACGCTCACCGGCAGCAGCC | + |
Preference number: 5 (lower is better) Translates to: NKDDVSHPGQVPGFW*ETGVGVSARSPAAA Trigger: GGCTGCTGCCGGTGAGCGTGCAGACACCCCAACTCCTGTTTCTCACCAGAACCCGGGAACCTGGCCGGGGTGCGACACATCATCCTTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234261.2 ENSMUST00000234579.2 |
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CDS GCA 90 bp | GACAGGCACCCAGCCATTGTCACACTGGTGCACGGCCTTGCCTTGTaGACGGAGCATGTGTGGTATGCTGGGACCGCACAGGTCCACATC | + |
Preference number: 5 (lower is better) Translates to: DRHPAIVTLVHGLAL*TEHVWYAGTAQVHI Trigger: GATGTGGACCTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTGACAATGGCTGGGTGCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234583.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CAGAGCCTAAAAAGGGAACTCCAGCCAGCCGGGCCAGCTCCTCCCCACTGCCGCGTAATCCCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 5 (lower is better) Translates to: QSLKRELQPAGPAPPHCRVIPCF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGGGATTAC...GCGGCAGTGGGGAGGAGCTGGCCCGGCTGGCTGGAGTTCCCTTTTTAGGCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234489.2 |
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CDS-3UTR CAA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCGGTGAGAAACAGGAGTaGGGGTGTCTGCACGCTCAC | + |
Preference number: 5 (lower is better) Translates to: HWPAPVWCGYESSLLTWGGEKQE*GCLHAH Trigger: GTGAGCGTGCAGACACCCCAACTCCTGTTTCTCACC...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234261.2 ENSMUST00000234579.2 |
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CDS TCA 90 bp | AGATGGTGCTTTTCCCAACGCCACCCTTTCCAGAAAGAACAAGGATaGTGTGTCGCACCCCGGCCAGGTTCCCGGGTTCGGCAGCAGCCT | + |
Preference number: 5 (lower is better) Translates to: RWCFSQRHPFQKEQG*CVAPRPGSRVRQQP Trigger: AGGCTGCTGCCGAACCCGGGAACCTGGCCGGGGTGCGACACATCATCCTTGTTCTTTCTGGAAAGGGTGGCGTTGGGAAAAGCACCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234293.2 |
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CDS GCA 90 bp | CACACTGGTGCACGGCCTTGCCTTGTGCACGGAGCATGTGTGGTATaGTGGGACCGCACAGGTCCACATCTAGGATTCCCACCTTCTTGC | + |
Preference number: 5 (lower is better) Translates to: HTGARPCLVHGACVV*WDRTGPHLGFPPSC Trigger: GCAAGAAGGTGGGAATCCTAGATGTGGACCTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234583.2 ENSMUST00000234968.2 |
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CDS CCA 90 bp | ACTGGTGCACGGCCTTGCCTTGTGCACGGAGCATGTGTGGTATGCTaGGACCGCACAGGTCCACATCTAGGATTCCCACCTTCTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: TGARPCLVHGACVVC*DRTGPHLGFPPSCP Trigger: AGGGCAAGAAGGTGGGAATCCTAGATGTGGACCTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234583.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCAGGATTCCCACCTTCTaGCCCTGGTGGCGCAGAGCC | + |
Preference number: 5 (lower is better) Translates to: LVSAKDMGACRSLHGCNRRIPTF*PWWRRA Trigger: GGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCCT...GCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | ATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGAGGATTCCCACCTTCTaGCCCTGGTGGCGCAGAGCC | + |
Preference number: 5 (lower is better) Translates to: MRKHWPAPVWCGYESSLLRIPTF*PWWRRA Trigger: GGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCCT...CAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234968.2 |
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CDS TCA 90 bp | AGATGGTGCTTTTCCCAACGCCACCCTTTCCAGAAAGAACAAGGATaGTGTGTCGCACCCCGGCCAGGTTCCCGGGTTCTGCACGCTCAC | + |
Preference number: 5 (lower is better) Translates to: RWCFSQRHPFQKEQG*CVAPRPGSRVLHAH Trigger: GTGAGCGTGCAGAACCCGGGAACCTGGCCGGGGTGCGACACATCATCCTTGTTCTTTCTGGAAAGGGTGGCGTTGGGAAAAGCACCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000044252.7 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234583.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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CDS-3UTR CAA 90 bp | AGTTTGGTGAAGCTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGTGCACGGCCTTGCCTaGTGCACGGAGCATGTGTGG | + |
Preference number: 5 (lower is better) Translates to: SLVKLVSAKDMGACRSLHVHGLA*CTEHVW Trigger: CCACACATGCTCCGTGCACAAGGCAAGGCCGTGCAC...ATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAGCTTCACCAAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | GCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGGGCGGTATGTTCCGCTGGAGAAGACATaGGTGCACTCAGCGCAGTGT | + |
Preference number: 5 (lower is better) Translates to: AEDKGLGCWVLPKTGRYVPLEKT*VHSAQC Trigger: ACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGG...AACATACCGCCCCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | GTCTCGATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCCGCTGGAGAAGACATaGGTGCACTCAGCGCAGTGT | + |
Preference number: 5 (lower is better) Translates to: VSMRKHWPAPVWCGYESSPLEKT*VHSAQC Trigger: ACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGG...GCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CTTACAGAAGGTCAGCTCCCGCCTCACATCCCCAATAGACACCGCCTGTGGTGTGGTGAGAAACAGGAGTaGGGGTGTCTGCACGCTCAC | + |
Preference number: 5 (lower is better) Translates to: LTEGQLPPHIPNRHRLWCGEKQE*GCLHAH Trigger: GTGAGCGTGCAGACACCCCAACTCCTGTTTCTCACC...ACACCACAGGCGGTGTCTATTGGGGATGTGAGGCGGGAGCTGACCTTCTGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234261.2 ENSMUST00000234579.2 |
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CDS-3UTR CAA 90 bp | GCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCAGAAGTGACATCAGTGCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 5 (lower is better) Translates to: APVWCGYESSLLTWGRSDISACF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGAT...GTCACTTCTGCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS TCA 90 bp | AGATGGTGCTTTTCCCAACGCCACCCTTTCCAGAAAGAACAAGGATaGTGTGTCGCACCCCGGCCAGGTTCCCGGGTTCTGGTGAGAAAC | + |
Preference number: 5 (lower is better) Translates to: RWCFSQRHPFQKEQG*CVAPRPGSRVLVRN Trigger: GTTTCTCACCAGAACCCGGGAACCTGGCCGGGGTGCGACACATCATCCTTGTTCTTTCTGGAAAGGGTGGCGTTGGGAAAAGCACCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234261.2 ENSMUST00000234579.2 |
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CDS CCA 90 bp | GGTCCCTGGAGGTGTGTCCACAACCAGATAATCCAGCATGTTTCTTaGGACCTCTCCACACCACGGCCTCATCAGGGTTTTCCAGCAGGA | + |
Preference number: 5 (lower is better) Translates to: GPWRCVHNQIIQHVS*DLSTPRPHQGFPAG Trigger: TCCTGCTGGAAAACCCTGATGAGGCCGTGGTGTGGAGAGGTCCCAAGAAACATGCTGGATTATCTGGTTGTGGACACACCTCCAGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234674.2 |
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CDS-3UTR CAA 90 bp | ACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGCACTGGTGCACGGCCTaGCCTTGTGCACGGAGCATG | + |
Preference number: 5 (lower is better) Translates to: TRCAGKPQCHKRHTTQHVHWCTA*PCARSM Trigger: CATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTG...CACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCTCGATGAGACACTGGTGCACGGCCTaGCCTTGTGCACGGAGCATG | + |
Preference number: 5 (lower is better) Translates to: HSVTKGTQHSMCGSVSMRHWCTA*PCARSM Trigger: CATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTG...TCTCATCGAGACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | AGAGTCACCTCGCTGAGGACAAAGGGCTTGGATGCTGGGTCCTTCCTAAGACGGAATCCAGCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 5 (lower is better) Translates to: RVTSLRTKGLDAGSFLRRNPACF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGCTGGATT...CCGTCTTAGGAAGGACCCAGCATCCAAGCCCTTTGTCCTCAGCGAGGTGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234674.2 |
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CDS-3UTR CAA 90 bp | ACGTCAGACACAAACTGCTTTATCAGTGCATGTTTCTTGGGACCTCTCCACACCAGGATTCCCACCTTCTaGCCCTGGTGGCGCAGAGCC | + |
Preference number: 5 (lower is better) Translates to: TSDTNCFISACFLGPLHTRIPTF*PWWRRA Trigger: GGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCCT...GGTGTGGAGAGGTCCCAAGAAACATGCACTGATAAAGCAGTTTGTGTCTGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234579.2 |
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CDS-3UTR CAA 90 bp | AGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACGCAGGCTATCCCCACTGGTGCACGGCCTaGCCTTGTGCACGGAGCATG | + |
Preference number: 5 (lower is better) Translates to: RLKVKAAIISRNQDAGYPHWCTA*PCARSM Trigger: CATGCTCCGTGCACAAGGCAAGGCCGTGCACCAGTG...GGGATAGCCTGCGTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | TCAGTCTCGATGAGAAAGCACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCATCAGTGCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 5 (lower is better) Translates to: SVSMRKHWPAPVWCGYESISACF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGAT...GCTCTCATAGCCACACCACACAGGAGCTGGCCAGTGCTTTCTCATCGAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CACTGGCCAGCTCCTGTGTGGTGTGGCTATGAGAGCAGCCTGTTGACCTGGGGCGAATATGCAGTGCTTTaGGGAAATTCCTGGATGAAG | + |
Preference number: 5 (lower is better) Translates to: HWPAPVWCGYESSLLTWGEYAVL*GNSWMK Trigger: CTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC...GCCCCAGGTCAACAGGCTGCTCTCATAGCCACACCACACAGGAGCTGGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CAA 90 bp | GATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGCAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGA | + |
Preference number: 5 (lower is better) Translates to: DVPVNHSVTKGTQHSMCGQAPGK*GIQGDR Trigger: TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTG...CCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CAA 90 bp | GCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGTGGGTCAGTCAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGA | + |
Preference number: 5 (lower is better) Translates to: AGKPQCHKRHTTQHVWVSQAPGK*GIQGDR Trigger: TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTG...ACTGACCCACACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CAA 90 bp | TGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACAGTGCACGGCCTTGCCTaGTGCACGGAGCATGTGTGG | + |
Preference number: 5 (lower is better) Translates to: CKVTRCAGKPQCHKRHTTVHGLA*CTEHVW Trigger: CCACACATGCTCCGTGCACAAGGCAAGGCCGTGCAC...TGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAACTTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | TTACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGATCAGTGCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 5 (lower is better) Translates to: LPDVPVNHSVTKGTQHSMISACF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGAT...CATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | GGCTGGACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCCGCTGGAGAAGACATaGGTGCACTCAGCGCAGTGT | + |
Preference number: 5 (lower is better) Translates to: GWTKAYRLKVKAAIISRNPLEKT*VHSAQC Trigger: ACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGG...ATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CTAATACTGCTTGTTCCAGACATGAAATGTAGGGGAATCAAGAGTCACCTCGCTCCGCTGGAGAAGACATaGGTGCACTCAGCGCAGTGT | + |
Preference number: 5 (lower is better) Translates to: LILLVPDMKCRGIKSHLAPLEKT*VHSAQC Trigger: ACACTGCGCTGAGTGCACCAATGTCTTCTCCAGCGG...AGCGAGGTGACTCTTGATTCCCCTACATTTCATGTCTGGAACAAGCAGTATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | CTAGTGTCAGCCAAGGACATGGGGGCCTGCAGATCTCTGCATGGATGTAATCGCGAATATGCAGTGCTTTaGGGAAATTCCTGGATGAAG | + |
Preference number: 5 (lower is better) Translates to: LVSAKDMGACRSLHGCNREYAVL*GNSWMK Trigger: CTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC...GCGATTACATCCATGCAGAGATCTGCAGGCCCCCATGTCCTTGGCTGACACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CAA 90 bp | GCGGTATGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCAATCAGTGCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 5 (lower is better) Translates to: AVCLIAEFCKVTRCAGKPISACF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGAT...TGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACATACCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | ACGAAAGCCTATAGGCTAAAGGTTAAGGCTGCTATTATCTCAAGGAATCAGGACATCAGTGCATGTTTCTaGGGACCTCTCCACACCACG | + |
Preference number: 5 (lower is better) Translates to: TKAYRLKVKAAIISRNQDISACF*GPLHTT Trigger: CGTGGTGTGGAGAGGTCCCAAGAAACATGCACTGAT...GTCCTGATTCCTTGAGATAATAGCAGCCTTAACCTTTAGCCTATAGGCTTTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 ENSMUST00000234968.2 |
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CDS-3UTR CAA 90 bp | TGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGTGTCAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGA | + |
Preference number: 5 (lower is better) Translates to: CLIAEFCKVTRCAGKPQCQAPGK*GIQGDR Trigger: TCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTG...ACACTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CAA 90 bp | ACCAGATGTGCCGGTAAACCACAGTGTCACAAAAGGCACACAACACAGCATGTGGAATATGCAGTGCTTTaGGGAAATTCCTGGATGAAG | + |
Preference number: 5 (lower is better) Translates to: TRCAGKPQCHKRHTTQHVEYAVL*GNSWMK Trigger: CTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC...CACATGCTGTGTTGTGTGCCTTTTGTGACACTGTGGTTTACCGGCACATCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS-3UTR CAA 90 bp | GTATGTTTAATAGCAGAGTTCTGTAAAGTTACCAGATGTGCCGGTAAACCACAGGAATATGCAGTGCTTTaGGGAAATTCCTGGATGAAG | + |
Preference number: 5 (lower is better) Translates to: VCLIAEFCKVTRCAGKPQEYAVL*GNSWMK Trigger: CTTCATCCAGGAATTTCCCAAAAGCACTGCATATTC...CTGTGGTTTACCGGCACATCTGGTAACTTTACAGAACTCTGCTATTAAACATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234597.2 ENSMUST00000234598.2 ENSMUST00000234928.2 |
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CDS TCA 72 bp | GATGTGTCGCACCCCGGCCAGGTTCCCGGGTTCTGGTaGGAAACAGGAGTTGGGGTGTCTGCACGCTCACCG | + |
Preference number: 6 (lower is better) Translates to: DVSHPGQVPGFW*ETGVGVSARSP Trigger: CGGTGAGCGTGCAGACACCCCAACTCCTGTTTCTCACCAGAACCCGGGAACCTGGCCGGGGTGCGACACATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234261.2 ENSMUST00000234579.2 |
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CDS GCA 72 bp | GACCGCACAGGTCCACATCTAGGATTCCCACCTTCTTaGCCTGGTGGCGCAGAGCCAGGGCCAACTCCGTGG | + |
Preference number: 6 (lower is better) Translates to: DRTGPHLGFPPS*PGGAEPGPTPW Trigger: CCACGGAGTTGGCCCTGGCTCTGCGCCACCAGGGCAAGAAGGTGGGAATCCTAGATGTGGACCTGTGCGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234583.2 ENSMUST00000234968.2 |
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CDS GCA 72 bp | GCACGGCCTTGCCTTGTGCACGGAGCATGTGTGGTATaGTGGGACCGCACAGGTCCACATCTAGGATTCCCA | + |
Preference number: 6 (lower is better) Translates to: ARPCLVHGACVV*WDRTGPHLGFP Trigger: TGGGAATCCTAGATGTGGACCTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234583.2 ENSMUST00000234598.2 ENSMUST00000234968.2 |
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CDS CCA 72 bp | CCTGGTGGCGCAGAGCCAGGGCCAACTCCGTGGAGATaGTGCTTTTCCCAACGCCACCCTTTCCAGAAAGAA | + |
Preference number: 6 (lower is better) Translates to: PGGAEPGPTPWR*CFSQRHPFQKE Trigger: TTCTTTCTGGAAAGGGTGGCGTTGGGAAAAGCACCATCTCCACGGAGTTGGCCCTGGCTCTGCGCCACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000044252.7 ENSMUST00000234261.2 ENSMUST00000234293.2 ENSMUST00000234352.2 ENSMUST00000234489.2 ENSMUST00000234579.2 ENSMUST00000234583.2 ENSMUST00000234968.2 ENSMUST00000235055.2 |
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CDS CCA 72 bp | CGGCCTTGCCTTGTGCACGGAGCATGTGTGGTATGCTaGGACCGCACAGGTCCACATCTAGGATTCCCACCT | + |
Preference number: 6 (lower is better) Translates to: RPCLVHGACVVC*DRTGPHLGFPP Trigger: AGGTGGGAATCCTAGATGTGGACCTGTGCGGTCCCAGCATACCACACATGCTCCGTGCACAAGGCAAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044252.7 ENSMUST00000234489.2 ENSMUST00000234583.2 ENSMUST00000234968.2 |
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CDS CCA 72 bp | ATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTTaGGAATCCAGGGGGACAGAGCAGCGCAGTGTGGGC | + |
Preference number: 6 (lower is better) Translates to: MKSRPSSKLLVS*ESRGTEQRSVG Trigger: GCCCACACTGCGCTGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234598.2 |
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CDS CAA 72 bp | GATGAAGTCACGCCCTTCCTCCAAGCTCCTGGTAAGTaGGGAATCCAGGGGGACAGAGCAGCGCAGTGTGGG | + |
Preference number: 6 (lower is better) Translates to: DEVTPFLQAPGK*GIQGDRAAQCG Trigger: CCCACACTGCGCTGCTCTGTCCCCCTGGATTCCCAACTTACCAGGAGCTTGGAGGAAGGGCGTGACTTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234598.2 |
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CDS CAA 90 bp | TCAGTGCTGCAAAGACCCCAAAGCCCAGCAGTAATCCCATGTTTCTaGGGACCTCTCCACACCACGGCCTCATCAGGGTTTTCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: SVLQRPQSPAVIPCF*GPLHTTASSGFSSR Trigger: CCTGCTGGAAAACCCTGATGAGGCCGTGGTGTGGAGAGGTCCCAAGAAACATGGGATTACTGCTGGGCTTTGGGGTCTTTGCAGCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234489.2 |
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CDS CAA 90 bp | AGGTCCCTGGAGGTGTGTCCACAACCAGATAATCCAGCATGTTTCTaGGGACCTCTCCACACCACGGCCTCATCAGGGTTTTCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: RSLEVCPQPDNPACF*GPLHTTASSGFSSR Trigger: CCTGCTGGAAAACCCTGATGAGGCCGTGGTGTGGAGAGGTCCCAAGAAACATGCTGGATTATCTGGTTGTGGACACACCTCCAGGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234674.2 |
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CDS CAA 72 bp | CAAAGACCCCAAAGCCCAGCAGTAATCCCATGTTTCTaGGGACCTCTCCACACCACGGCCTCATCAGGGTTT | + |
Preference number: 6 (lower is better) Translates to: QRPQSPAVIPCF*GPLHTTASSGF Trigger: AAACCCTGATGAGGCCGTGGTGTGGAGAGGTCCCAAGAAACATGGGATTACTGCTGGGCTTTGGGGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234489.2 |
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CDS CAA 72 bp | GAGGTGTGTCCACAACCAGATAATCCAGCATGTTTCTaGGGACCTCTCCACACCACGGCCTCATCAGGGTTT | + |
Preference number: 6 (lower is better) Translates to: EVCPQPDNPACF*GPLHTTASSGF Trigger: AAACCCTGATGAGGCCGTGGTGTGGAGAGGTCCCAAGAAACATGCTGGATTATCTGGTTGTGGACACACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234674.2 |
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CDS CCA 72 bp | AGGTGTGTCCACAACCAGATAATCCAGCATGTTTCTTaGGACCTCTCCACACCACGGCCTCATCAGGGTTTT | + |
Preference number: 6 (lower is better) Translates to: RCVHNQIIQHVS*DLSTPRPHQGF Trigger: AAAACCCTGATGAGGCCGTGGTGTGGAGAGGTCCCAAGAAACATGCTGGATTATCTGGTTGTGGACACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234674.2 |