Pregenerated sensors for NUB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028954Ensembl transcript IDs: ENSMUST00000068825.8, ENSMUST00000197407.5
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGAGGGCAGTTCAGCAGCAGGACAGTGGGCAAAGTGCACAGGATaGCTAGCTGAGAAGACGACAGGAGACAGTCCCAGGCCCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: EEGSSAAGQWAKCTG*LAEKTTGDSPRPSA Trigger: TGCAGAGGGCCTGGGACTGTCTCCTGTCGTCTTCTCAGCTAGCCATCCTGTGCACTTTGCCCACTGTCCTGCTGCTGAACTGCCCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATCTGGGTCCCTGTACCTaGGGAGGAAGCCTACTTAGA | + |
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Preference number: 2 (lower is better) Translates to: RDLHRLPRWEGGWQPVRHLGPCT*GGSLLR Trigger: TCTAAGTAGGCTTCCTCCTCAGGTACAGGGACCCAG...ATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTATCTGCCTGGCCACACCCAGGACTAAGCAACCAAAGGCTGACAGGCCCGCAGGGCAGCAAGGGTaGGAGAAGCTTGCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KAICLATPRTKQPKADRPAGQQG*EKLAQQ Trigger: CTGCTGTGCAAGCTTCTCTCACCCTTGCTGCCCTGC...GGGCCTGTCAGCCTTTGGTTGCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTCGATCAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCACAGGATGGCTAGCTaGGAAGACGACAGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: IFRSRDLHRLPRWEGGWQHRMAS*EDDRRQ Trigger: CTGTCTCCTGTCGTCTTCTCAGCTAGCCATCCTGTG...CTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | ACATCTGGCTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCGCAGGGCAGCAAGGGTaGGAGAAGCTTGCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TSGCYHAWVLEGYLPGHTAGQQG*EKLAQQ Trigger: CTGCTGTGCAAGCTTCTCTCACCCTTGCTGCCCTGC...GGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR GCA 90 bp | ACATCTGGCTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCCAGTCCCAGGCCCTCTaGAGACCTTCTCCGGGACTA | + |
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Preference number: 2 (lower is better) Translates to: TSGCYHAWVLEGYLPGHTQSQAL*RPSPGL Trigger: TAGTCCCGGAGAAGGTCTGCAGAGGGCCTGGGACTG...GGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTATCTGCCTGGCCACACCCAGGACTAAGCAACCAAAGGCTGACAGGCCCGGAAAACCAACAGAGTaGCAGTCTGGGATGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KAICLATPRTKQPKADRPGKPTE*QSGMQA Trigger: GGCCTGCATCCCAGACTGCCACTCTGTTGGTTTTCC...GGGCCTGTCAGCCTTTGGTTGCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAGGACAGTGGGCAAAGTaGACAGGATGGCTAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: AGSLSVIAGLHSTWNEDAGQWAK*TGWLAE Trigger: CTCAGCTAGCCATCCTGTGCACTTTGCCCACTGTCC...TGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | CACACATTGTCTTCTGAGCCCCAGACTCGTGCTGTGGTATGTCTGCCCTATCCCCACAGGATGGCTAGCTaGGAAGACGACAGGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: HTLSSEPQTRAVVCLPYPHRMAS*EDDRRQ Trigger: CTGTCTCCTGTCGTCTTCTCAGCTAGCCATCCTGTG...GGGATAGGGCAGACATACCACAGCACGAGTCTGGGGCTCAGAAGACAATGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR GCA 90 bp | CACACATTGTCTTCTGAGCCCCAGACTCGTGCTGTGGTATGTCTGCCCTATCCCGGACAGTGGGCAAAGTaGACAGGATGGCTAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HTLSSEPQTRAVVCLPYPGQWAK*TGWLAE Trigger: CTCAGCTAGCCATCCTGTGCACTTTGCCCACTGTCC...GGGATAGGGCAGACATACCACAGCACGAGTCTGGGGCTCAGAAGACAATGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | GTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAATGGGTGATGCAGGGCTGGGTCCCTGTACCTaGGGAGGAAGCCTACTTAGA | + |
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Preference number: 2 (lower is better) Translates to: VIAGLHSTWNEDAMGDAGLGPCT*GGSLLR Trigger: TCTAAGTAGGCTTCCTCCTCAGGTACAGGGACCCAG...CCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCTGTGACCCAGTTATAGGAAACCCAGGGAGAGTCCTGAGAAAGCAGATCAGTGGCAGTCTGGGATaGAGGCCTAGAGGAGGACGG | + |
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Preference number: 2 (lower is better) Translates to: VFCDPVIGNPGRVLRKQISGSLG*RPRGGR Trigger: CCGTCCTCCTCTAGGCCTGCATCCCAGACTGCCACT...GATCTGCTTTCTCAGGACTCTCCCTGGGTTTCCTATAACTGGGTCACAGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGCTCTTGGGAACACAGTaGCACTTGGCCCACACCACA | + |
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Preference number: 2 (lower is better) Translates to: HQHHSVPKHSKGASKTIRLLGTQ*HLAHTT Trigger: TGTGGTGTGGGCCAAGTGCCACTGTGTTCCCAAGAG...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | CACACATTGTCTTCTGAGCCCCAGACTCGTGCTGTGGTATGTCTGCCCTATCCCACCCAGGGAGAGTCCTaGGAAAGCAGATCACAATCT | + |
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Preference number: 2 (lower is better) Translates to: HTLSSEPQTRAVVCLPYPTQGES*ESRSQS Trigger: AGATTGTGATCTGCTTTCTCAGGACTCTCCCTGGGT...GGGATAGGGCAGACATACCACAGCACGAGTCTGGGGCTCAGAAGACAATGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | ACATCTGGCTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCTCAGCAAGTCTTCTGTaGCCCAGTTATAGGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: TSGCYHAWVLEGYLPGHTSASLL*PSYRKP Trigger: GGGTTTCCTATAACTGGGTCACAGAAGACTTGCTGA...GGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | TTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCCAGGACTAAGCCCCTGTTACACTGAATaGAAAACCAACAGAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPCLGARRLSAWPHPGLSPCYTE*KTNRVA Trigger: TGCCACTCTGTTGGTTTTCCATTCAGTGTAACAGGG...GCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGGCAAAGTGCACAGGATaGCTAGCTGAGAAGACGACA | + |
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Preference number: 2 (lower is better) Translates to: HQHHSVPKHSKGASKTIRAKCTG*LAEKTT Trigger: TGTCGTCTTCTCAGCTAGCCATCCTGTGCACTTTGC...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAGTGGCAGTCTGGGATaGAGGCCTAGAGGAGGACGG | + |
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Preference number: 2 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSSGSLG*RPRGGR Trigger: CCGTCCTCCTCTAGGCCTGCATCCCAGACTGCCACT...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | ATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGATGCCAAGGCTTCAGCTaGAATGAAAAGCTCTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ISIIQFQSTARGPARPSGCQGFS*NEKLLG Trigger: TCCCAAGAGCTTTTCATTTCAGCTGAAGCCTTGGCA...TCCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | GTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAATGGGTGATGCAGGGCCCTGTTACACTGAATaGAAAACCAACAGAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: VIAGLHSTWNEDAMGDAGPCYTE*KTNRVA Trigger: TGCCACTCTGTTGGTTTTCCATTCAGTGTAACAGGG...CCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCTGTGACCCAGTTATAGGAAACCCAGGGAGAGTCCTGAGAAAGCAGATCGGAATGAAGATGCAATaGGTGATGCAGGGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VFCDPVIGNPGRVLRKQIGMKMQ*VMQGSK Trigger: CTTGCTGCCCTGCATCACCCATTGCATCTTCATTCC...GATCTGCTTTCTCAGGACTCTCCCTGGGTTTCCTATAACTGGGTCACAGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAAGGCCCACACCACATCTaGCTGTTACCATGCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VRSPCLFPSASFSSKAQQGPHHI*LLPCLG Trigger: ACCCAGGCATGGTAACAGCCAGATGTGGTGTGGGCC...TTGCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGAGACTGTCCTCTGACTaGCAAAGTCTCTTCAATACA | + |
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Preference number: 2 (lower is better) Translates to: HQHHSVPKHSKGASKTIRRLSSD*QSLFNT Trigger: TGTATTGAAGAGACTTTGTCAGTCAGAGGACAGTCT...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCTCAGCAGCAGGACAGTaGGCAAAGTGCACAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSSAAGQ*AKCTGW Trigger: CCATCCTGTGCACTTTGCCCACTGTCCTGCTGCTGA...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | AATCATACTTGTCCAGCTTGGTCTGCTGCCAAGGCTTCAGCTGAAATGAAAAGCGGAATGAAGATGCAATaGGTGATGCAGGGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: NHTCPAWSAAKASAEMKSGMKMQ*VMQGSK Trigger: CTTGCTGCCCTGCATCACCCATTGCATCTTCATTCC...GCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGACCAAGCTGGACAAGTATGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CCA 90 bp | AATCATACTTGTCCAGCTTGGTCTGCTGCCAAGGCTTCAGCTGAAATGAAAAGCGGGCTCCACAGCACTTaGAATGAAGATGCAATGGGT | + |
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Preference number: 2 (lower is better) Translates to: NHTCPAWSAAKASAEMKSGLHST*NEDAMG Trigger: ACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCC...GCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGACCAAGCTGGACAAGTATGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCATCTGGCTGTTACCATaGCTGGGTGCTAGAAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSIWLLP*LGARRL Trigger: TAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGAT...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAGGCTTCAGCTGAAATaGAAAGCTCTTGGGAACACA | + |
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Preference number: 2 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSRLQLK*KALGNT Trigger: TGTGTTCCCAAGAGCTTTTCATTTCAGCTGAAGCCT...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGACATTCCCTTTCCTAGACTGTCCTCTGACTGACAAAGTCTCTTCAATATTAGAGAAAAATCGTTaGAAAGCAAGAGGAACGCAA | + |
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Preference number: 2 (lower is better) Translates to: AGTFPFLDCPLTDKVSSILEKNR*KARGTQ Trigger: TTGCGTTCCTCTTGCTTTTCAACGATTTTTCTCTAA...TATTGAAGAGACTTTGTCAGTCAGAGGACAGTCTAGGAAAGGGAATGTCCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR TCA 90 bp | GTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAATTAGAGAAAAATCGTTaGAAAGCAAGAGGAACGCAA | + |
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Preference number: 2 (lower is better) Translates to: VRSPCLFPSASFSSKAQQLEKNR*KARGTQ Trigger: TTGCGTTCCTCTTGCTTTTCAACGATTTTTCTCTAA...TTGCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR GCA 72 bp | ACACTGTCATTTTTCGATCAAGGGATCTGCACCGCCTaGCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTC | + |
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Preference number: 3 (lower is better) Translates to: TLSFFDQGICTA*HGGREAGSLSV Trigger: GACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAATGACAGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR CCA 72 bp | ATTTTTCGATCAAGGGATCTGCACCGCCTGCCACGGTaGGAGGGAGGCTGGCAGCCTGTCCGTCATTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: IFRSRDLHRLPR*EGGWQPVRHCW Trigger: CCAGCAATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR TCA 72 bp | AGCAGGACAGTGGGCAAAGTGCACAGGATGGCTAGCTaGGAAGACGACAGGAGACAGTCCCAGGCCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: SRTVGKVHRMAS*EDDRRQSQALC Trigger: GCAGAGGGCCTGGGACTGTCTCCTGTCGTCTTCTCAGCTAGCCATCCTGTGCACTTTGCCCACTGTCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR GCA 72 bp | GAGGAGGGCAGTTCAGCAGCAGGACAGTGGGCAAAGTaGACAGGATGGCTAGCTGAGAAGACGACAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: EEGSSAAGQWAK*TGWLAEKTTGD Trigger: GTCTCCTGTCGTCTTCTCAGCTAGCCATCCTGTGCACTTTGCCCACTGTCCTGCTGCTGAACTGCCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR CCA 72 bp | GGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCACTTaGAATGAAGATGCAATGGGTGATGCAGGGCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GSLSVIAGLHST*NEDAMGDAGQQ Trigger: TTGCTGCCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGACGGACAGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CAA 90 bp | GTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAATGGGTGATGCAGGGAAGGGTGAGAGAAGCTaGCACAGCAGAGGTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: VIAGLHSTWNEDAMGDAGKGERS*HSRGGG Trigger: CCCACCACCTCTGCTGTGCAAGCTTCTCTCACCCTT...CCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR CCA 72 bp | CTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTaGCCACACCCAGGACTAAGCAACCAAAGGCTGACA | + |
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Preference number: 3 (lower is better) Translates to: LLPCLGARRLSA*PHPGLSNQRLT Trigger: TGTCAGCCTTTGGTTGCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CAA 90 bp | TTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCCAGGACTAAGCACAATCTCAGGTCCCTaGGCTATCAGTAAGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LPCLGARRLSAWPHPGLSTISGP*AISKLP Trigger: TGGAAGCTTACTGATAGCCAAGGGACCTGAGATTGT...GCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR TCA 72 bp | CAAAGGCTGACAGGCCCTTCTTCAGCAAGTCTTCTGTaGCCCAGTTATAGGAAACCCAGGGAGAGTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: QRLTGPSSASLL*PSYRKPRESPE Trigger: CTCAGGACTCTCCCTGGGTTTCCTATAACTGGGTCACAGAAGACTTGCTGAAGAAGGGCCTGTCAGCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR CCA 72 bp | TCTGCTGCCAAGGCTTCAGCTGAAATGAAAAGCTCTTaGGAACACAGTGGCACTTGGCCCACACCACATCTG | + |
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Preference number: 3 (lower is better) Translates to: SAAKASAEMKSS*EHSGTWPTPHL Trigger: CAGATGTGGTGTGGGCCAAGTGCCACTGTGTTCCCAAGAGCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CAA 90 bp | GTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAAGGAACACAGTGGCACTaGGCCCACACCACATCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VRSPCLFPSASFSSKAQQGTQWH*AHTTSG Trigger: GCCAGATGTGGTGTGGGCCAAGTGCCACTGTGTTCC...TTGCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR TCA 72 bp | GGCTGGGACATTCCCTTTCCTAGACTGTCCTCTGACTaGCAAAGTCTCTTCAATACACTGGGTCCCTGTACC | + |
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Preference number: 3 (lower is better) Translates to: GWDIPFPRLSSD*QSLFNTLGPCT Trigger: GGTACAGGGACCCAGTGTATTGAAGAGACTTTGTCAGTCAGAGGACAGTCTAGGAAAGGGAATGTCCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR TCA 72 bp | TACTTGTCCAGCTTGGTCTGCTGCCAAGGCTTCAGCTaGAATGAAAAGCTCTTGGGAACACAGTGGCACTTG | + |
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Preference number: 3 (lower is better) Translates to: YLSSLVCCQGFS*NEKLLGTQWHL Trigger: CAAGTGCCACTGTGTTCCCAAGAGCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGACCAAGCTGGACAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAGTTCAGTCCACACATaGTCTTCTGAGCCCCAGACT | + |
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Preference number: 3 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSSSVHT*SSEPQT Trigger: AGTCTGGGGCTCAGAAGACAATGTGTGGACTGAACT...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCACAATCTCAGGTCCCTaGGCTATCAGTAAGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSTISGP*AISKLP Trigger: TGGAAGCTTACTGATAGCCAAGGGACCTGAGATTGT...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| 3UTR TCA 72 bp | GTACCTGAGGAGGAAGCCTACTTAGAGAAAAATCGTTaGAAAGCAAGAGGAACGCAAAGAAGCATTCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: VPEEEAYLEKNR*KARGTQRSIQP Trigger: TGGTTGAATGCTTCTTTGCGTTCCTCTTGCTTTTCAACGATTTTTCTCTAAGTAGGCTTCCTCCTCAGGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | AGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATGAGCCAGCTGCGACCTaGCGAGTGCCCGGATGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDLHRLPRWEGGWQPVRHEPAAT*RVPGCG Trigger: GCCGCATCCGGGCACTCGGCAGGTCGCAGCTGGCTC...ATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCGGGCATCGTCCAGGTTaGCTCTGGCCTGGTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGICTACHGGREAGSLSVGHRPG*LWPGEG Trigger: CCCTTCACCAGGCCAGAGGCAACCTGGACGATGCCC...GACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATGGAGGAGTCCTCTCCTaGGAACTGCAGGTCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLHRLPRWEGGWQPVRHGGVLS*ELQVGW Trigger: CCACCCGACCTGCAGTTCTCAGGAGAGGACTCCTCC...ATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCCTCTGCAGACCTTCTCCGGGACTACCTACCCTGCCTCAGGAGGTGGGTGCCGAGTGCCCGGATaGGGCAAAGGCCGCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGPLQTFSGTTYPASGGGCRVPG*GKGRRL Trigger: CAAACGGCGGCCTTTGCCGCATCCGGGCACTCGGCA...CCCACCTCCTGAGGCAGGGTAGGTAGTCCCGGAGAAGGTCTGCAGAGGGCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | AGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATCCCTGCAGAGTCAGATaGGGATGTGGACGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLHRLPRWEGGWQPVRHPCRVR*GCGRCG Trigger: CCCACACCGTCCACATCCCCATCTGACTCTGCAGGG...ATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCGGGCCAGTTCCTCTCTaGGGTTGGAAATGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGICTACHGGREAGSLSVGPVPL*GWKCEW Trigger: CCACTCACATTTCCAACCGCAGAGAGGAACTGGCCC...GACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | TGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCTGCAAGGGTCTGAGCTaGCAGCTGGACATTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHGGREAGSLSVIAGLHSCKGLS*QLDIAS Trigger: GGAGGCAATGTCCAGCTGGCAGCTCAGACCCTTGCA...GCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCGGCACTAGAGGTCCCTaGAGAGTCAGATGGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QGICTACHGGREAGSLSVGTRGP*RVRWGC Trigger: ACATCCCCATCTGACTCTGCAGGGACCTCTAGTGCC...GACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | CAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCGTTTGGCAGCTTGTGTaGAGTAGCCCATTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGICTACHGGREAGSLSVVWQLV*SSPFLS Trigger: TGAGAGGAATGGGCTACTCCACACAAGCTGCCAAAC...GACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| 3UTR CAA 72 bp | GCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATaGCTGGGCTCCACAGCACTTGGAATGAAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATVGGRLAACPS*LGSTALGMKMQ Trigger: TTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCCTCTGCAGACCTTCTCCGGGACTACCTACCCTGCCTCAGGAGGTGGGTCTCTACCAGTGACATaGAAGCGGGTCTCCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGPLQTFSGTTYPASGGGSLPVT*KRVSNK Trigger: CTTGTTGGAGACCCGCTTGCATGTCACTGGTAGAGA...CCCACCTCCTGAGGCAGGGTAGGTAGTCCCGGAGAAGGTCTGCAGAGGGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGGAGGACGGGGCACAGCAGAGCTAGGCTGGGACATTCCCTTTCCTAGACCCTGCAGAGTCAGATaGGGATGTGGACGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGGRGTAELGWDIPFPRPCRVR*GCGRCG Trigger: CCCACACCGTCCACATCCCCATCTGACTCTGCAGGG...TCTAGGAAAGGGAATGTCCCAGCCTAGCTCTGCTGTGCCCCGTCCTCCTCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCCTCTGCAGACCTTCTCCGGGACTACCTACCCTGCCTCAGGAGGTGGGGCTCTGCCCTTCTCGTaGTATCCCATAGCTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: PGPLQTFSGTTYPASGGGALPFS*YPIANI Trigger: TATGTTAGCTATGGGATATCACGAGAAGGGCAGAGC...CCCACCTCCTGAGGCAGGGTAGGTAGTCCCGGAGAAGGTCTGCAGAGGGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCTATCTGCCTGGCCACACCCAGGACTAAGCAACCAAAGGCTGACAGGCCCTTGCCTCTGGCCTGGTaGAGGGCTTGTTTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAICLATPRTKQPKADRPLPLAW*RACLAA Trigger: AGCTGCCAAACAAGCCCTTCACCAGGCCAGAGGCAA...GGGCCTGTCAGCCTTTGGTTGCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CACACATTGTCTTCTGAGCCCCAGACTCGTGCTGTGGTATGTCTGCCCTATCCCGGGCATCGTCCAGGTTaGCTCTGGCCTGGTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTLSSEPQTRAVVCLPYPGHRPG*LWPGEG Trigger: CCCTTCACCAGGCCAGAGGCAACCTGGACGATGCCC...GGGATAGGGCAGACATACCACAGCACGAGTCTGGGGCTCAGAAGACAATGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | AACAGAGTGGCAGTCTGGGATGCAGGCCTAGAGGAGGACGGGGCACAGCAGAGCCTGCCAGCTGGACATTaGCTCCAAACACCCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRVAVWDAGLEEDGAQQSLPAGH*LQTPLV Trigger: CACTAAGGGTGTTTGGAGGCAATGTCCAGCTGGCAG...GCTCTGCTGTGCCCCGTCCTCCTCTAGGCCTGCATCCCAGACTGCCACTCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCGATCAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGGTGCTTCCGGAGCCTTaGAGGCAGGAACACCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IFRSRDLHRLPRWEGGWQVLPEP*RQEHLN Trigger: ATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCAC...CTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCCTCTGCAGACCTTCTCCGGGACTACCTACCCTGCCTCAGGAGGTGGGATCGCCTTCACATTGTaGGTGACTCCTTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGPLQTFSGTTYPASGGGIAFTL*VTPCSS Trigger: TGAAGAACAAGGAGTCACTCACAATGTGAAGGCGAT...CCCACCTCCTGAGGCAGGGTAGGTAGTCCCGGAGAAGGTCTGCAGAGGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAAGGGGGAATTCTGAGTaGCCTGCCTGTCTGGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSLSVIAGLHSTWNEDARGNSE*PACLVR Trigger: GCGAACCAGACAGGCAGGTCACTCAGAATTCCCCCT...TGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | TTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCCAGGACTAAGCCTGCGGTTGGAAATGTaGGTGGCTGCATGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LPCLGARRLSAWPHPGLSLRLEM*VAAWST Trigger: CGTGGACCATGCAGCCACTCACATTTCCAACCGCAG...GCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCTATCTGCCTGGCCACACCCAGGACTAAGCAACCAAAGGCTGACAGGCCCACATGTGGGGGTTGCTaGGGAGAACCTTCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAICLATPRTKQPKADRPTCGGC*GEPSGH Trigger: ATGCCCTGAAGGTTCTCCTCAGCAACCCCCACATGT...GGGCCTGTCAGCCTTTGGTTGCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCGATCAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGTGTACACCAGCTGGTTaGTGCTTTCCTGGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IFRSRDLHRLPRWEGGWQCTPAG*CFPGKD Trigger: GTCCTTCCCAGGAAAGCATCAACCAGCTGGTGTACA...CTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGGCTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCTGGTGTGCAAGGGTCTaGGCTGCCAGCTGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: TSGCYHAWVLEGYLPGHTWCARV*AASWTL Trigger: CAATGTCCAGCTGGCAGCTCAGACCCTTGCACACCA...GGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | TGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCGTTCAGCTTTTTCTCTaGATCATCAAGGCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHGGREAGSLSVIAGLHSVQLFL*IIKAFQ Trigger: CTGGAATGCCTTGATGATGCAGAGAAAAAGCTGAAC...GCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | ACATCTGGCTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCTGCAAGGGTCTGAGCTaGCAGCTGGACATTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGCYHAWVLEGYLPGHTCKGLS*QLDIAS Trigger: GGAGGCAATGTCCAGCTGGCAGCTCAGACCCTTGCA...GGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | TTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCCAGGACTAAGCAGTCAGATGGGGATGTaGACGGTGTGGGGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPCLGARRLSAWPHPGLSSQMGM*TVWGRS Trigger: ACTCCTCCCCCACACCGTCCACATCCCCATCTGACT...GCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AACAGAGTGGCAGTCTGGGATGCAGGCCTAGAGGAGGACGGGGCACAGCAGAGCCCTTCACATTGTGAGTaGCTCCTTGTTCTTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRVAVWDAGLEEDGAQQSPSHCE*LLVLQG Trigger: GCCTTGAAGAACAAGGAGTCACTCACAATGTGAAGG...GCTCTGCTGTGCCCCGTCCTCCTCTAGGCCTGCATCCCAGACTGCCACTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | CACACATTGTCTTCTGAGCCCCAGACTCGTGCTGTGGTATGTCTGCCCTATCCCCTGCAGGGGGAATTCTaGGTGACCTGCCTGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTLSSEPQTRAVVCLPYPLQGEF*VTCLSG Trigger: ACCAGACAGGCAGGTCACTCAGAATTCCCCCTGCAG...GGGATAGGGCAGACATACCACAGCACGAGTCTGGGGCTCAGAAGACAATGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AACAGAGTGGCAGTCTGGGATGCAGGCCTAGAGGAGGACGGGGCACAGCAGAGCTTCCTCTCAAAGTGTTaGCATTTTCCAGACGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NRVAVWDAGLEEDGAQQSFLSKC*HFPDGV Trigger: GACGCCGTCTGGAAAATGTCAACACTTTGAGAGGAA...GCTCTGCTGTGCCCCGTCCTCCTCTAGGCCTGCATCCCAGACTGCCACTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGGCTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCACATGTGGGGGTTGCTaGGGAGAACCTTCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSGCYHAWVLEGYLPGHTTCGGC*GEPSGH Trigger: ATGCCCTGAAGGTTCTCCTCAGCAACCCCCACATGT...GGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGGAGGACGGGGCACAGCAGAGCTAGGCTGGGACATTCCCTTTCCTAGAGTCCAGCTGGAGGACTaGATAGTTGTCCACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGGRGTAELGWDIPFPRVQLED*IVVHSV Trigger: GACACTGTGGACAACTATGCAGTCCTCCAGCTGGAC...TCTAGGAAAGGGAATGTCCCAGCCTAGCTCTGCTGTGCCCCGTCCTCCTCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAGGGCCAGTTCCTCTCTaGGGTTGGAAATGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSLSVIAGLHSTWNEDAGPVPL*GWKCEW Trigger: CCACTCACATTTCCAACCGCAGAGAGGAACTGGCCC...TGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAATGGGTGATGCAGGGCAGCGCTTCCTCCATGGTGTaGAAGGGTCTGAGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSTALGMKMQWVMQGSASSMV*KGLSCQ Trigger: CTGGCAGCTCAGACCCTTGCACACCATGGAGGAAGC...GCTGCCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | ATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGATCTTCTGCGCCATCCTaGGCCACTGCCGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISIIQFQSTARGPARPSGSSAPS*ATAEPA Trigger: AGCTGGCTCGGCAGTGGCGCAGGATGGCGCAGAAGA...TCCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | ACATCTGGCTGTTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCGTGCTTCCGGAGCCTTaGAGGCAGGAACACCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TSGCYHAWVLEGYLPGHTVLPEP*RQEHLN Trigger: ATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCAC...GGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAACAGCCAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGAGGGGGAATTCTGAGTaGCCTGCCTGTCTGGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HQHHSVPKHSKGASKTIRRGNSE*PACLVR Trigger: GCGAACCAGACAGGCAGGTCACTCAGAATTCCCCCT...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAATGGGTGATGCAGGGCAGCGGCACTAGAGGTCCCTaGAGAGTCAGATGGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGSTALGMKMQWVMQGSGTRGP*RVRWGC Trigger: ACATCCCCATCTGACTCTGCAGGGACCTCTAGTGCC...GCTGCCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | ATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGATGGTGTGCAAGGGTCTaGGCTGCCAGCTGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: ISIIQFQSTARGPARPSGWCARV*AASWTL Trigger: CAATGTCCAGCTGGCAGCTCAGACCCTTGCACACCA...TCCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | GTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAACTGCGACCTGCCGAGTaGCCGGATGCGGCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRSPCLFPSASFSSKAQQLRPAE*PDAAKA Trigger: GGCCTTTGCCGCATCCGGGCACTCGGCAGGTCGCAG...TTGCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCCTGTTACACTGAATGGAAAACCAACAGAGTGGCAGTCTGGGATGCAGTTGCCTCTGGCCTGGTaGAGGGCTTGTTTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFPVTLNGKPTEWQSGMQLPLAW*RACLAA Trigger: AGCTGCCAAACAAGCCCTTCACCAGGCCAGAGGCAA...CTGCATCCCAGACTGCCACTCTGTTGGTTTTCCATTCAGTGTAACAGGGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AATCATACTTGTCCAGCTTGGTCTGCTGCCAAGGCTTCAGCTGAAATGAAAAGCGGAGGAGTCCTCTCCTaGGAACTGCAGGTCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHTCPAWSAAKASAEMKSGGVLS*ELQVGW Trigger: CCACCCGACCTGCAGTTCTCAGGAGAGGACTCCTCC...GCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGACCAAGCTGGACAAGTATGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGGTCCAGCTGGAGGACTaGATAGTTGTCCACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HQHHSVPKHSKGASKTIRVQLED*IVVHSV Trigger: GACACTGTGGACAACTATGCAGTCCTCCAGCTGGAC...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCTGTTACACTGAATGGAAAACCAACAGAGTGGCAGTCTGGGATGCAGGCTTCCTCCATGGTGTaGAAGGGTCTGAGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFPVTLNGKPTEWQSGMQASSMV*KGLSCQ Trigger: CTGGCAGCTCAGACCCTTGCACACCATGGAGGAAGC...CTGCATCCCAGACTGCCACTCTGTTGGTTTTCCATTCAGTGTAACAGGGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGGAGGACGGGGCACAGCAGAGCTAGGCTGGGACATTCCCTTTCCTAGAGGAGGTTTCCAAAGTTaGATTCTGTCTTCCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRGGRGTAELGWDIPFPRGGFQS*ILSSLR Trigger: TCTAAGGGAAGACAGAATTCAACTTTGGAAACCTCC...TCTAGGAAAGGGAATGTCCCAGCCTAGCTCTGCTGTGCCCCGTCCTCCTCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGTCTCTACCAGTGACATaGAAGCGGGTCTCCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQHHSVPKHSKGASKTIRSLPVT*KRVSNK Trigger: CTTGTTGGAGACCCGCTTGCATGTCACTGGTAGAGA...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCTTCAATACACTGGGTCCCTGTACCTGAGGAGGAAGCCTACTTAGAGAGTCAGATGGGGATGTaGACGGTGTGGGGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSSIHWVPVPEEEAYLESQMGM*TVWGRS Trigger: ACTCCTCCCCCACACCGTCCACATCCCCATCTGACT...CTCTAAGTAGGCTTCCTCCTCAGGTACAGGGACCCAGTGTATTGAAGAGACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAGGAGGTTTCCAAAGTTaGATTCTGTCTTCCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGSLSVIAGLHSTWNEDAGGFQS*ILSSLR Trigger: TCTAAGGGAAGACAGAATTCAACTTTGGAAACCTCC...TGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGGACATTCCCTTTCCTAGACTGTCCTCTGACTGACAAAGTCTCTTCAATACTGCGGTTGGAAATGTaGGTGGCTGCATGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: AGTFPFLDCPLTDKVSSILRLEM*VAAWST Trigger: CGTGGACCATGCAGCCACTCACATTTCCAACCGCAG...TATTGAAGAGACTTTGTCAGTCAGAGGACAGTCTAGGAAAGGGAATGTCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | GTCTTCTGTGACCCAGTTATAGGAAACCCAGGGAGAGTCCTGAGAAAGCAGATCGTTTGGTCCTCTGAATaGGTCTCTCCTTCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFCDPVIGNPGRVLRKQIVWSSE*VSPSAR Trigger: CCGAGCTGAAGGAGAGACGCATTCAGAGGACCAAAC...GATCTGCTTTCTCAGGACTCTCCCTGGGTTTCCTATAACTGGGTCACAGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCCTGCAGGGGGAATTCTaGGTGACCTGCCTGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSLQGEF*VTCLSG Trigger: ACCAGACAGGCAGGTCACTCAGAATTCCCCCTGCAG...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | ATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGATTCCTCTCAAAGTGTTaGCATTTTCCAGACGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISIIQFQSTARGPARPSGFLSKC*HFPDGV Trigger: GACGCCGTCTGGAAAATGTCAACACTTTGAGAGGAA...TCCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTCTTCAATACACTGGGTCCCTGTACCTGAGGAGGAAGCCTACTTAGAGTGTACACCAGCTGGTTaGTGCTTTCCTGGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSSIHWVPVPEEEAYLECTPAG*CFPGKD Trigger: GTCCTTCCCAGGAAAGCATCAACCAGCTGGTGTACA...CTCTAAGTAGGCTTCCTCCTCAGGTACAGGGACCCAGTGTATTGAAGAGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AATCATACTTGTCCAGCTTGGTCTGCTGCCAAGGCTTCAGCTGAAATGAAAAGCCCTCCAGGATTTCGTTaGCAGCCTCCGTCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NHTCPAWSAAKASAEMKSPPGFR*QPPSPC Trigger: ACATGGAGACGGAGGCTGTCAACGAAATCCTGGAGG...GCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGACCAAGCTGGACAAGTATGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGGACATTCCCTTTCCTAGACTGTCCTCTGACTGACAAAGTCTCTTCAATACCTCCAGGATTTCGTTaGCAGCCTCCGTCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AGTFPFLDCPLTDKVSSIPPGFR*QPPSPC Trigger: ACATGGAGACGGAGGCTGTCAACGAAATCCTGGAGG...TATTGAAGAGACTTTGTCAGTCAGAGGACAGTCTAGGAAAGGGAATGTCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGTTTTCAGGAAAGCTCTaGCCTTCTCGTGATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQHHSVPKHSKGASKTIRFSGKL*PSRDIP Trigger: TGGGATATCACGAGAAGGGCAGAGCTTTCCTGAAAA...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTCCCTGTTACACTGAATGGAAAACCAACAGAGTGGCAGTCTGGGATGCAGGTTCCTCTCTGCGGTTaGAAATGTGAGTGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFPVTLNGKPTEWQSGMQVPLCG*KCEWLH Trigger: ATGCAGCCACTCACATTTCCAACCGCAGAGAGGAAC...CTGCATCCCAGACTGCCACTCTGTTGGTTTTCCATTCAGTGTAACAGGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | AATCATACTTGTCCAGCTTGGTCTGCTGCCAAGGCTTCAGCTGAAATGAAAAGCGTTTGGTCCTCTGAATaGGTCTCTCCTTCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NHTCPAWSAAKASAEMKSVWSSE*VSPSAR Trigger: CCGAGCTGAAGGAGAGACGCATTCAGAGGACCAAAC...GCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGACCAAGCTGGACAAGTATGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | GTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAACTGCCAGCTGGACATTaGCTCCAAACACCCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRSPCLFPSASFSSKAQQLPAGH*LQTPLV Trigger: CACTAAGGGTGTTTGGAGGCAATGTCCAGCTGGCAG...TTGCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGGACATTCCCTTTCCTAGACTGTCCTCTGACTGACAAAGTCTCTTCAATACCTTCACATTGTGAGTaGCTCCTTGTTCTTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGTFPFLDCPLTDKVSSIPSHCE*LLVLQG Trigger: GCCTTGAAGAACAAGGAGTCACTCACAATGTGAAGG...TATTGAAGAGACTTTGTCAGTCAGAGGACAGTCTAGGAAAGGGAATGTCCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR TCA 90 bp | AATCATACTTGTCCAGCTTGGTCTGCTGCCAAGGCTTCAGCTGAAATGAAAAGCGCTCTGCCCTTCTCGTaGTATCCCATAGCTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: NHTCPAWSAAKASAEMKSALPFS*YPIANI Trigger: TATGTTAGCTATGGGATATCACGAGAAGGGCAGAGC...GCTTTTCATTTCAGCTGAAGCCTTGGCAGCAGACCAAGCTGGACAAGTATGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCTGTTACACTGAATGGAAAACCAACAGAGTGGCAGTCTGGGATGCAGGTTCAGCTTTTTCTCTaGATCATCAAGGCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFPVTLNGKPTEWQSGMQVQLFL*IIKAFQ Trigger: CTGGAATGCCTTGATGATGCAGAGAAAAAGCTGAAC...CTGCATCCCAGACTGCCACTCTGTTGGTTTTCCATTCAGTGTAACAGGGAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAATGGGTGATGCAGGGCAGCTTTTTAAAGCATTTCTaGGCCAAGTTCAGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGSTALGMKMQWVMQGSFLKHF*AKFSFF Trigger: GAAAAAGCTGAACTTGGCCCAGAAATGCTTTAAAAA...GCTGCCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCGTTTGGCAGCTTGTGTaGAGTAGCCCATTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSVWQLV*SSPFLS Trigger: TGAGAGGAATGGGCTACTCCACACAAGCTGCCAAAC...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTCTTCAATACACTGGGTCCCTGTACCTGAGGAGGAAGCCTACTTAGAGTTTTTAAAGCATTTCTaGGCCAAGTTCAGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSSIHWVPVPEEEAYLEFLKHF*AKFSFF Trigger: GAAAAAGCTGAACTTGGCCCAGAAATGCTTTAAAAA...CTCTAAGTAGGCTTCCTCCTCAGGTACAGGGACCCAGTGTATTGAAGAGACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | AGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATCACCACATGTGGGGGTaGCTGAGGAGAACCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RDLHRLPRWEGGWQPVRHHHMWG*LRRTFR Trigger: CCTGAAGGTTCTCCTCAGCAACCCCCACATGTGGTG...ATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | TGCCACGGTGGGAGGGAGGCTGGCAGCCTGTCCGTCATTGCTGGGCTCCACAGCCACCACATGTGGGGGTaGCTGAGGAGAACCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHGGREAGSLSVIAGLHSHHMWG*LRRTFR Trigger: CCTGAAGGTTCTCCTCAGCAACCCCCACATGTGGTG...GCTGTGGAGCCCAGCAATGACGGACAGGCTGCCAGCCTCCCTCCCACCGTGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 90 bp | CCTTCCGGATTTGGGCCAGTTCCTCTCTGCGGTTGGAAATGTGAGTaGCTGCATGGTCCACGTTTCCATCGCAGGCCCGTAGGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSGFGPVPLCGWKCE*LHGPRFHRRPVGPA Trigger: GGCTGGGCCTACGGGCCTGCGATGGAAACGTGGACCATGCAGCCACTCACATTTCCAACCGCAGAGAGGAACTGGCCCAAATCCGGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS-3UTR CAA 90 bp | ATTTTTCGATCAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCTCTTCCTTCCGGATTaGGGCCAGTTCCTCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: IFRSRDLHRLPRWEGGWQLFLPD*GQFLSA Trigger: CGCAGAGAGGAACTGGCCCAAATCCGGAAGGAAGAG...CTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS TCA 90 bp | TCTTCCTTCCGGATTTGGGCCAGTTCCTCTCTGCGGTTGGAAATGTaGGTGGCTGCATGGTCCACGTTTCCATCGCAGGCCCGTAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSFRIWASSSLRLEM*VAAWSTFPSQARRP Trigger: GGGCCTACGGGCCTGCGATGGAAACGTGGACCATGCAGCCACTCACATTTCCAACCGCAGAGAGGAACTGGCCCAAATCCGGAAGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS TCA 90 bp | AACTGCAGGTCGGGTGGGAGGCTTCCTCCATGGTGTGCAAGGGTCTaGGCTGCCAGCTGGACATTGCCTCCAAACACCCTTAGTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NCRSGGRLPPWCARV*AASWTLPPNTLSAA Trigger: AGCTGCACTAAGGGTGTTTGGAGGCAATGTCCAGCTGGCAGCTCAGACCCTTGCACACCATGGAGGAAGCCTCCCACCCGACCTGCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | AACAGAGTGGCAGTCTGGGATGCAGGCCTAGAGGAGGACGGGGCACAGCAGAGCCTTGCTTGGCGGCTATaGTTTTCAGGGTCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: NRVAVWDAGLEEDGAQQSLAWRL*FSGSAS Trigger: GGATGCAGACCCTGAAAACAATAGCCGCCAAGCAAG...GCTCTGCTGTGCCCCGTCCTCCTCTAGGCCTGCATCCCAGACTGCCACTCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 90 bp | CCAGCTGGAGGACTGCATAGTTGTCCACAGTGTCCAGCAGCTCTTTaGACTCACAGAAGTATCTGTCAGCGTCCAGGAGGCAGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGGLHSCPQCPAAL*THRSICQRPGGRAG Trigger: CCCTGCCCTGCCTCCTGGACGCTGACAGATACTTCTGTGAGTGCAAAGAGCTGCTGGACACTGTGGACAACTATGCAGTCCTCCAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 90 bp | GAAACTGAGTCAGTTTTGCTTGAAGATATTTCTTCTGCGCCATCCTaGGCCACTGCCGAGCCAGCTGCGACCTGCCGAGTGCCCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: ETESVLLEDISSAPS*ATAEPAATCRVPGC Trigger: GCATCCGGGCACTCGGCAGGTCGCAGCTGGCTCGGCAGTGGCGCAGGATGGCGCAGAAGAAATATCTTCAAGCAAAACTGACTCAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
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| CDS CCA 90 bp | CAACCACCATCTCAGCTCTCTCCGCCAGGATCTCCAGTCCCCGTTTaGTCCTCTGAATGCGTCTCTCCTTCAGCTCGGCCTCGTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QPPSQLSPPGSPVPV*SSECVSPSARPRSV Trigger: AACAGAACGAGGCCGAGCTGAAGGAGAGACGCATTCAGAGGACCAAACGGGGACTGGAGATCCTGGCGGAGAGAGCTGAGATGGTGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCGATCAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGCTTGCTTGGCGGCTATaGTTTTCAGGGTCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: IFRSRDLHRLPRWEGGWQLAWRL*FSGSAS Trigger: GGATGCAGACCCTGAAAACAATAGCCGCCAAGCAAG...CTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 90 bp | GGCTTCCTCCATGGTGTGCAAGGGTCTGAGCTGCCAGCTGGACATTaGCTCCAAACACCCTTAGTGCAGCTTCAGCCACCACTGTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GFLHGVQGSELPAGH*LQTPLVQLQPPLCQ Trigger: TTGACACAGTGGTGGCTGAAGCTGCACTAAGGGTGTTTGGAGGCAATGTCCAGCTGGCAGCTCAGACCCTTGCACACCATGGAGGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCGATCAAGGGATCTGCACCGCCTGCCACGGTGGGAGGGAGGCTGGCAGATGTACACCAGCTGGTaGATGCTTTCCTGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IFRSRDLHRLPRWEGGWQMYTSW*MLSWEG Trigger: TCCTTCCCAGGAAAGCATCAACCAGCTGGTGTACAT...CTGCCAGCCTCCCTCCCACCGTGGCAGGCGGTGCAGATCCCTTGATCGAAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 90 bp | TGGCGGCTATTGTTTTCAGGGTCTGCATCCTGTAACCACCACATGTaGGGGTTGCTGAGGAGAACCTTCAGGGCATCGTCCAGGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WRLLFSGSASCNHHM*GLLRRTFRASSRLP Trigger: AGGCAACCTGGACGATGCCCTGAAGGTTCTCCTCAGCAACCCCCACATGTGGTGGTTACAGGATGCAGACCCTGAAAACAATAGCCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 90 bp | CTACCAGTGACATGCAAGCGGGTCTCCAACAAGCTTTTCTTATCGTaGTTCCGGAGCCTTGGAGGCAGGAACACCTCAATGGTGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPVTCKRVSNKLFLS*FRSLGGRNTSMVAI Trigger: GATCGCCACCATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCACGATAAGAAAAGCTTGTTGGAGACCCGCTTGCATGTCACTGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 90 bp | CAAGCGGGTCTCCAACAAGCTTTTCTTATCGTGCTTCCGGAGCCTTaGAGGCAGGAACACCTCAATGGTGGCGATCCCAGTTGTTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QAGLQQAFLIVLPEP*RQEHLNGGDPSCSV Trigger: TACCGAACAACTGGGATCGCCACCATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCACGATAAGAAAAGCTTGTTGGAGACCCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | TTACCATGCCTGGGTGCTAGAAGGCTATCTGCCTGGCCACACCCAGGACTAAGCATGTACACCAGCTGGTaGATGCTTTCCTGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPCLGARRLSAWPHPGLSMYTSW*MLSWEG Trigger: TCCTTCCCAGGAAAGCATCAACCAGCTGGTGTACAT...GCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTTCTAGCACCCAGGCATGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | GTCTTCTGTGACCCAGTTATAGGAAACCCAGGGAGAGTCCTGAGAAAGCAGATCCTCTTCCTTCCGGATTaGGGCCAGTTCCTCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VFCDPVIGNPGRVLRKQILFLPD*GQFLSA Trigger: CGCAGAGAGGAACTGGCCCAAATCCGGAAGGAAGAG...GATCTGCTTTCTCAGGACTCTCCCTGGGTTTCCTATAACTGGGTCACAGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 90 bp | CTGTTCCAGGCGGAAGTAACACCACACAATGTCCAGCTGGAGGACTaGATAGTTGTCCACAGTGTCCAGCAGCTCTTTGCACTCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFQAEVTPHNVQLED*IVVHSVQQLFALTE Trigger: TTCTGTGAGTGCAAAGAGCTGCTGGACACTGTGGACAACTATGCAGTCCTCCAGCTGGACATTGTGTGGTGTTACTTCCGCCTGGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 90 bp | CCCATGTACACCAGCTGGTTGATGCTTTCCTGGGAAGGACTTGCTTaGCGGCTATTGTTTTCAGGGTCTGCATCCTGTAACCACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: PMYTSWLMLSWEGLA*RLLFSGSASCNHHM Trigger: CATGTGGTGGTTACAGGATGCAGACCCTGAAAACAATAGCCGCCAAGCAAGTCCTTCCCAGGAAAGCATCAACCAGCTGGTGTACATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 90 bp | ACCACTGTGTCAAAGCCCATGTACACCAGCTGGTTGATGCTTTCCTaGGAAGGACTTGCTTGGCGGCTATTGTTTTCAGGGTCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TTVSKPMYTSWLMLS*EGLAWRLLFSGSAS Trigger: GGATGCAGACCCTGAAAACAATAGCCGCCAAGCAAGTCCTTCCCAGGAAAGCATCAACCAGCTGGTGTACATGGGCTTTGACACAGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | GTCATTGCTGGGCTCCACAGCACTTGGAATGAAGATGCAATGGGTGATGCAGGGGTGTCCAGCAGCTCTTaGCACTCACAGAAGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VIAGLHSTWNEDAMGDAGVSSSS*HSQKYL Trigger: CAGATACTTCTGTGAGTGCAAAGAGCTGCTGGACAC...CCCTGCATCACCCATTGCATCTTCATTCCAAGTGCTGTGGAGCCCAGCAATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCTATCTGCCTGGCCACACCCAGGACTAAGCAACCAAAGGCTGACAGGCCCTCCACTGTGATAGTTTaGGATTCCCTGAAGCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KAICLATPRTKQPKADRPSTVIV*DSLKQV Trigger: TACTTGCTTCAGGGAATCCAAAACTATCACAGTGGA...GGGCCTGTCAGCCTTTGGTTGCTTAGTCCTGGGTGTGGCCAGGCAGATAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 90 bp | CCTCAATGGTGGCGATCCCAGTTGTTCGGTAGTGTTCATTCCCAGTaGCGCGCTCAATTGCTTTGCGTCGGATTTCCTCGATTATGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQWWRSQLFGSVHSQ*RAQLLCVGFPRLCF Trigger: AAAACATAATCGAGGAAATCCGACGCAAAGCAATTGAGCGCGGCACTGGGAATGAACACTACCGAACAACTGGGATCGCCACCATTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS-3UTR CAA 90 bp | CATCAGCATCATTCAGTTCCAAAGCACAGCAAGGGGGCCAGCAAGACCATCAGGGAAAGTTTCAGCTATTaGACACCTCAGGTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: HQHHSVPKHSKGASKTIRESFSY*TPQVST Trigger: GGTAGAGACCTGAGGTGTCAAATAGCTGAAACTTTC...CCTGATGGTCTTGCTGGCCCCCTTGCTGTGCTTTGGAACTGAATGATGCTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 90 bp | CAGTTGTTCGGTAGTGTTCATTCCCAGTGCCGCGCTCAATTGCTTTaGGTCGGATTTCCTCGATTATGTTTTCCACTTCGTTTTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLFGSVHSQCRAQLL*VGFPRLCFPLRFHS Trigger: GCTGTGAAAACGAAGTGGAAAACATAATCGAGGAAATCCGACGCAAAGCAATTGAGCGCGGCACTGGGAATGAACACTACCGAACAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS-3UTR CAA 90 bp | TGCTTCCCTGTTACACTGAATGGAAAACCAACAGAGTGGCAGTCTGGGATGCAGATTCCTCTCAAAGTGTaGACATTTTCCAGACGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: CFPVTLNGKPTEWQSGMQIPLKV*TFSRRR Trigger: ACGCCGTCTGGAAAATGTCAACACTTTGAGAGGAAT...CTGCATCCCAGACTGCCACTCTGTTGGTTTTCCATTCAGTGTAACAGGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS TCA 90 bp | GAAATCCGAAAGTTTCAGCTATTTGACACCTCAGGTCTCTACCAGTaGCATGCAAGCGGGTCTCCAACAAGCTTTTCTTATCGTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIRKFQLFDTSGLYQ*HASGSPTSFSYRAS Trigger: GGAAGCACGATAAGAAAAGCTTGTTGGAGACCCGCTTGCATGTCACTGGTAGAGACCTGAGGTGTCAAATAGCTGAAACTTTCGGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS-3UTR CAA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCGTGTCCAGCAGCTCTTaGCACTCACAGAAGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSVSSSS*HSQKYL Trigger: CAGATACTTCTGTGAGTGCAAAGAGCTGCTGGACAC...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS TCA 90 bp | CTTCAGACTGTTTCAGCTCCAGTACCATCGCCTTCACATTGTGAGTaGCTCCTTGTTCTTCAAGGCTTTTCCCTAGTTGAAGCTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQTVSAPVPSPSHCE*LLVLQGFSLVEAVS Trigger: AGAAACAGCTTCAACTAGGGAAAAGCCTTGAAGAACAAGGAGTCACTCACAATGTGAAGGCGATGGTACTGGAGCTGAAACAGTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 90 bp | GTAACAGTTTTTAAAGCATTTCTGGGCCAAGTTCAGCTTTTTCTCTaGATCATCAAGGCATTCCAGCTGTTCCAGGCGGAAGTAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: VTVFKAFLGQVQLFL*IIKAFQLFQAEVTP Trigger: TGGTGTTACTTCCGCCTGGAACAGCTGGAATGCCTTGATGATGCAGAGAAAAAGCTGAACTTGGCCCAGAAATGCTTTAAAAACTGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS-3UTR CAA 90 bp | GTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCAAGAAAGTTTCAGCTATTaGACACCTCAGGTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: VRSPCLFPSASFSSKAQQESFSY*TPQVST Trigger: GGTAGAGACCTGAGGTGTCAAATAGCTGAAACTTTC...TTGCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS-3UTR CAA 90 bp | AAGTGCGTTCCCCATGTTTATTTCCATCAGCATCATTCAGTTCCAAAGCACAGCATTCCTCTCAAAGTGTaGACATTTTCCAGACGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KCVPHVYFHQHHSVPKHSIPLKV*TFSRRR Trigger: ACGCCGTCTGGAAAATGTCAACACTTTGAGAGGAAT...GCTGTGCTTTGGAACTGAATGATGCTGATGGAAATAAACATGGGGAACGCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 72 bp | GCGCCATCCTGCGCCACTGCCGAGCCAGCTGCGACCTaGCGAGTGCCCGGATGCGGCAAAGGCCGCCGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: APSCATAEPAAT*RVPGCGKGRRL Trigger: CAAACGGCGGCCTTTGCCGCATCCGGGCACTCGGCAGGTCGCAGCTGGCTCGGCAGTGGCGCAGGATGGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
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| CDS GCA 72 bp | TTCTTCTGCGCCATCCTGCGCCACTGCCGAGCCAGCTaGGACCTGCCGAGTGCCCGGATGCGGCAAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FFCAILRHCRAS*DLPSARMRQRP Trigger: CGGCCTTTGCCGCATCCGGGCACTCGGCAGGTCGCAGCTGGCTCGGCAGTGGCGCAGGATGGCGCAGAAGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
||
| CDS GCA 72 bp | CCTGCGCCACTGCCGAGCCAGCTGCGACCTGCCGAGTaGCCGGATGCGGCAAAGGCCGCCGTTTGTTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAPLPSQLRPAE*PDAAKAAVCFH Trigger: ATGAAAACAAACGGCGGCCTTTGCCGCATCCGGGCACTCGGCAGGTCGCAGCTGGCTCGGCAGTGGCGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
||
| CDS TCA 72 bp | TGGGGATGTGGACGGTGTGGGGGAGGAGTCCTCTCCTaGGAACTGCAGGTCGGGTGGGAGGCTTCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: WGCGRCGGGVLS*ELQVGWEASSM Trigger: CATGGAGGAAGCCTCCCACCCGACCTGCAGTTCTCAGGAGAGGACTCCTCCCCCACACCGTCCACATCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 72 bp | GTGGACGGTGTGGGGGAGGAGTCCTCTCCTGAGAACTaGAGGTCGGGTGGGAGGCTTCCTCCATGGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VDGVGEESSPEN*RSGGRLPPWCA Trigger: TGCACACCATGGAGGAAGCCTCCCACCCGACCTGCAGTTCTCAGGAGAGGACTCCTCCCCCACACCGTCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 72 bp | AGGTCCCTGCAGAGTCAGATGGGGATGTGGACGGTGTaGGGGAGGAGTCCTCTCCTGAGAACTGCAGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLQSQMGMWTV*GRSPLLRTAGR Trigger: CCGACCTGCAGTTCTCAGGAGAGGACTCCTCCCCCACACCGTCCACATCCCCATCTGACTCTGCAGGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS TCA 72 bp | TCGGGTGGGAGGCTTCCTCCATGGTGTGCAAGGGTCTaGGCTGCCAGCTGGACATTGCCTCCAAACACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGGRLPPWCARV*AASWTLPPNTL Trigger: AAGGGTGTTTGGAGGCAATGTCCAGCTGGCAGCTCAGACCCTTGCACACCATGGAGGAAGCCTCCCACCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 72 bp | TCTCAGCTCTCTCCGCCAGGATCTCCAGTCCCCGTTTaGTCCTCTGAATGCGTCTCTCCTTCAGCTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQLSPPGSPVPV*SSECVSPSARP Trigger: AGGCCGAGCTGAAGGAGAGACGCATTCAGAGGACCAAACGGGGACTGGAGATCCTGGCGGAGAGAGCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS TCA 72 bp | CGGATTTGGGCCAGTTCCTCTCTGCGGTTGGAAATGTaGGTGGCTGCATGGTCCACGTTTCCATCGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RIWASSSLRLEM*VAAWSTFPSQA Trigger: GGCCTGCGATGGAAACGTGGACCATGCAGCCACTCACATTTCCAACCGCAGAGAGGAACTGGCCCAAATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 72 bp | GGCATCGTCCAGGTTGCCTCTGGCCTGGTGAAGGGCTaGTTTGGCAGCTTGTGTGGAGTAGCCCATTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GIVQVASGLVKG*FGSLCGVAHSS Trigger: AGAGGAATGGGCTACTCCACACAAGCTGCCAAACAAGCCCTTCACCAGGCCAGAGGCAACCTGGACGATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 90 bp | TCCGGAGCCTTGGAGGCAGGAACACCTCAATGGTGGCGATCCCAGTaGTTCGGTAGTGTTCATTCCCAGTGCCGCGCTCAATTGCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGALEAGTPQWWRSQ*FGSVHSQCRAQLLC Trigger: GCAAAGCAATTGAGCGCGGCACTGGGAATGAACACTACCGAACAACTGGGATCGCCACCATTGAGGTGTTCCTGCCTCCAAGGCTCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 72 bp | TCAGTTTTGCTTGAAGATATTTCTTCTGCGCCATCCTaGGCCACTGCCGAGCCAGCTGCGACCTGCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SVLLEDISSAPS*ATAEPAATCRV Trigger: CACTCGGCAGGTCGCAGCTGGCTCGGCAGTGGCGCAGGATGGCGCAGAAGAAATATCTTCAAGCAAAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197407.5 |
||
| CDS CCA 72 bp | TTTGGGCCAGTTCCTCTCTGCGGTTGGAAATGTGAGTaGCTGCATGGTCCACGTTTCCATCGCAGGCCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: FGPVPLCGWKCE*LHGPRFHRRPV Trigger: TACGGGCCTGCGATGGAAACGTGGACCATGCAGCCACTCACATTTCCAACCGCAGAGAGGAACTGGCCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CCA 72 bp | CGTCCAGGTTGCCTCTGGCCTGGTGAAGGGCTTGTTTaGCAGCTTGTGTGGAGTAGCCCATTCCTCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RPGCLWPGEGLV*QLVWSSPFLSK Trigger: CTTTGAGAGGAATGGGCTACTCCACACAAGCTGCCAAACAAGCCCTTCACCAGGCCAGAGGCAACCTGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 90 bp | GCAAGCGGGTCTCCAACAAGCTTTTCTTATCGTGCTTCCGGAGCCTaGGAGGCAGGAACACCTCAATGGTGGCGATCCCAGTTGTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGSPTSFSYRASGA*EAGTPQWWRSQLFG Trigger: ACCGAACAACTGGGATCGCCACCATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCACGATAAGAAAAGCTTGTTGGAGACCCGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 90 bp | CTATTGTTTTCAGGGTCTGCATCCTGTAACCACCACATGTGGGGGTaGCTGAGGAGAACCTTCAGGGCATCGTCCAGGTTGCCTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLFSGSASCNHHMWG*LRRTFRASSRLPLA Trigger: GGCCAGAGGCAACCTGGACGATGCCCTGAAGGTTCTCCTCAGCAACCCCCACATGTGGTGGTTACAGGATGCAGACCCTGAAAACAATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 72 bp | CCTTCTCTTCCTTCCGGATTTGGGCCAGTTCCTCTCTaGGGTTGGAAATGTGAGTGGCTGCATGGTCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLPSGFGPVPL*GWKCEWLHGPR Trigger: ACGTGGACCATGCAGCCACTCACATTTCCAACCGCAGAGAGGAACTGGCCCAAATCCGGAAGGAAGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 72 bp | TCCTCCTCGTGCTCCGGAATGTCCTCCAGGATTTCGTaGACAGCCTCCGTCTCCATGTCTTCATCTGTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSCSGMSSRIS*TASVSMSSSVE Trigger: CTCGACAGATGAAGACATGGAGACGGAGGCTGTCAACGAAATCCTGGAGGACATTCCGGAGCACGAGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 90 bp | AACCTTCAGGGCATCGTCCAGGTTGCCTCTGGCCTGGTGAAGGGCTaGTTTGGCAGCTTGTGTGGAGTAGCCCATTCCTCTCAAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: NLQGIVQVASGLVKG*FGSLCGVAHSSQSV Trigger: AACACTTTGAGAGGAATGGGCTACTCCACACAAGCTGCCAAACAAGCCCTTCACCAGGCCAGAGGCAACCTGGACGATGCCCTGAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 72 bp | TGGCGATCCCAGTTGTTCGGTAGTGTTCATTCCCAGTaGCGCGCTCAATTGCTTTGCGTCGGATTTCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WRSQLFGSVHSQ*RAQLLCVGFPR Trigger: TCGAGGAAATCCGACGCAAAGCAATTGAGCGCGGCACTGGGAATGAACACTACCGAACAACTGGGATCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 72 bp | GGACTGCATAGTTGTCCACAGTGTCCAGCAGCTCTTTaGACTCACAGAAGTATCTGTCAGCGTCCAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLHSCPQCPAAL*THRSICQRPGG Trigger: GCCTCCTGGACGCTGACAGATACTTCTGTGAGTGCAAAGAGCTGCTGGACACTGTGGACAACTATGCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 72 bp | CTCCAACAAGCTTTTCTTATCGTGCTTCCGGAGCCTTaGAGGCAGGAACACCTCAATGGTGGCGATCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LQQAFLIVLPEP*RQEHLNGGDPS Trigger: ACTGGGATCGCCACCATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCACGATAAGAAAAGCTTGTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 72 bp | TCTCCAACAAGCTTTTCTTATCGTGCTTCCGGAGCCTaGGAGGCAGGAACACCTCAATGGTGGCGATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPTSFSYRASGA*EAGTPQWWRSQ Trigger: CTGGGATCGCCACCATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCACGATAAGAAAAGCTTGTTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS CAA 90 bp | ACCAGCTGGTTGATGCTTTCCTGGGAAGGACTTGCTTGGCGGCTATaGTTTTCAGGGTCTGCATCCTGTAACCACCACATGTGGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSWLMLSWEGLAWRL*FSGSASCNHHMWGL Trigger: CAACCCCCACATGTGGTGGTTACAGGATGCAGACCCTGAAAACAATAGCCGCCAAGCAAGTCCTTCCCAGGAAAGCATCAACCAGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 72 bp | ACATGCAAGCGGGTCTCCAACAAGCTTTTCTTATCGTaGTTCCGGAGCCTTGGAGGCAGGAACACCTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TCKRVSNKLFLS*FRSLGGRNTSM Trigger: CATTGAGGTGTTCCTGCCTCCAAGGCTCCGGAAGCACGATAAGAAAAGCTTGTTGGAGACCCGCTTGCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 72 bp | GCGGAAGTAACACCACACAATGTCCAGCTGGAGGACTaGATAGTTGTCCACAGTGTCCAGCAGCTCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AEVTPHNVQLED*IVVHSVQQLFA Trigger: TGCAAAGAGCTGCTGGACACTGTGGACAACTATGCAGTCCTCCAGCTGGACATTGTGTGGTGTTACTTCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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| CDS GCA 72 bp | GTACACCAGCTGGTTGATGCTTTCCTGGGAAGGACTTaGTTGGCGGCTATTGTTTTCAGGGTCTGCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VHQLVDAFLGRT*LAAIVFRVCIL Trigger: CAGGATGCAGACCCTGAAAACAATAGCCGCCAAGCAAGTCCTTCCCAGGAAAGCATCAACCAGCTGGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CAA 90 bp | ATCGTCCAGGTTGCCTCTGGCCTGGTGAAGGGCTTGTTTGGCAGCTaGTGTGGAGTAGCCCATTCCTCTCAAAGTGTTGACATTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IVQVASGLVKGLFGS*CGVAHSSQSVDIFQ Trigger: CTGGAAAATGTCAACACTTTGAGAGGAATGGGCTACTCCACACAAGCTGCCAAACAAGCCCTTCACCAGGCCAGAGGCAACCTGGACGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CCA 72 bp | ACCAGCTGGTTGATGCTTTCCTGGGAAGGACTTGCTTaGCGGCTATTGTTTTCAGGGTCTGCATCCTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSWLMLSWEGLA*RLLFSGSASCN Trigger: GTTACAGGATGCAGACCCTGAAAACAATAGCCGCCAAGCAAGTCCTTCCCAGGAAAGCATCAACCAGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 72 bp | GGTAGTGTTCATTCCCAGTGCCGCGCTCAATTGCTTTaGGTCGGATTTCCTCGATTATGTTTTCCACTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GSVHSQCRAQLL*VGFPRLCFPLR Trigger: ACGAAGTGGAAAACATAATCGAGGAAATCCGACGCAAAGCAATTGAGCGCGGCACTGGGAATGAACACTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS TCA 72 bp | GTTTCAGCTCCAGTACCATCGCCTTCACATTGTGAGTaGCTCCTTGTTCTTCAAGGCTTTTCCCTAGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSAPVPSPSHCE*LLVLQGFSLVE Trigger: TTCAACTAGGGAAAAGCCTTGAAGAACAAGGAGTCACTCACAATGTGAAGGCGATGGTACTGGAGCTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS GCA 72 bp | TTTAAAGCATTTCTGGGCCAAGTTCAGCTTTTTCTCTaGATCATCAAGGCATTCCAGCTGTTCCAGGCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FKAFLGQVQLFL*IIKAFQLFQAE Trigger: TTCCGCCTGGAACAGCTGGAATGCCTTGATGATGCAGAGAAAAAGCTGAACTTGGCCCAGAAATGCTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS TCA 72 bp | AAGTTTCAGCTATTTGACACCTCAGGTCTCTACCAGTaGCATGCAAGCGGGTCTCCAACAAGCTTTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: KFQLFDTSGLYQ*HASGSPTSFSY Trigger: ATAAGAAAAGCTTGTTGGAGACCCGCTTGCATGTCACTGGTAGAGACCTGAGGTGTCAAATAGCTGAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
||
| CDS CAA 72 bp | GATGTAATTTTCTTGAAATCCGAAAGTTTCAGCTATTaGACACCTCAGGTCTCTACCAGTGACATGCAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: DVIFLKSESFSY*TPQVSTSDMQA Trigger: CGCTTGCATGTCACTGGTAGAGACCTGAGGTGTCAAATAGCTGAAACTTTCGGATTTCAAGAAAATTACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068825.8 ENSMUST00000197407.5 |
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