Pregenerated sensors for NUAK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020032Ensembl transcript IDs: ENSMUST00000020220.15, ENSMUST00000129355.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATTCCATCAACCAGCAATGGCTGCTACACCCGAGACCAGCTGCCTaGTCAGGGGCCAGCAGTGTAGCAGCAGGCGGGGTTGTTCACGAG | + |
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Preference number: 1 (lower is better) Translates to: NSINQQWLLHPRPAA*SGASSVAAGGVVHE Trigger: CTCGTGAACAACCCCGCCTGCTGCTACACTGCTGGCCCCTGAGCAGGCAGCTGGTCTCGGGTGTAGCAGCCATTGCTGGTTGATGGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 90 bp | GACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTaGAACGGAGGACACACCCCACACCCGAGAGCCTCTGTTCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: DLQIKADLDSTQCQP*NGGHTPHPRASVLG Trigger: ACCAAGAACAGAGGCTCTCGGGTGTGGGGTGTGTCCTCCGTTCCAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 90 bp | CAGCGACTTTCCCACTCTGCCCATGGGGTCATCTGTGTCTCTCACTaGGGACTCCGCGGAAATGAGTCAGGCATCCCTTCTTTGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QRLSHSAHGVICVSH*GLRGNESGIPSLAG Trigger: CCCAGCCAAAGAAGGGATGCCTGACTCATTTCCGCGGAGTCCCCAGTGAGAGACACAGATGACCCCATGGGCAGAGTGGGAAAGTCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR TCA 90 bp | GAGAGGCTCCCACAAGGCAGCCACCTTAGAAGAAGGATTCTAATTTaGCTAAGCCAGTGGATTCCGTGGTCAGCCCAGAAAGACCACTTC | + |
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Preference number: 1 (lower is better) Translates to: ERLPQGSHLRRRILI*LSQWIPWSAQKDHF Trigger: GAAGTGGTCTTTCTGGGCTGACCACGGAATCCACTGGCTTAGTCAAATTAGAATCCTTCTTCTAAGGTGGCTGCCTTGTGGGAGCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 90 bp | AGCAGCTCTGTGCCCCATTACACACAAAGCCCTGGGCTCTCACACTaGCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SSSVPHYTQSPGLSH*HLYSCSPSEDPTKE Trigger: TTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAATGGGGCACAGAGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR TCA 90 bp | GCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACATCTAGATaGCTTCTAGGAAACACACCCTTCCCCATAATGCCGCTTCCCATT | + |
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Preference number: 1 (lower is better) Translates to: ADGLSLSSPPPETSR*LLGNTPFPIMPLPI Trigger: AATGGGAAGCGGCATTATGGGGAAGGGTGTGTTTCCTAGAAGTCATCTAGATGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 90 bp | CCACAGTACAGACATTACCAATTGATCACCAATTCACACTCAGGTTaGTGGAGTCTTGCTAGCCCCTGTGTAGTCAGACCAGGCTTGCTA | + |
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Preference number: 1 (lower is better) Translates to: PQYRHYQLITNSHSG*WSLASPCVVRPGLL Trigger: TAGCAAGCCTGGTCTGACTACACAGGGGCTAGCAAGACTCCAGCAACCTGAGTGTGAATTGGTGATCAATTGGTAATGTCTGTACTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 90 bp | AATACTGAGATATTTAAGAAAGTGTTAAGTCGCCCCTTGCTGGCATaGTTCACCGTCAGTCCATTCACTGAGCAAAGGCCCCAGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: NTEIFKKVLSRPLLA*FTVSPFTEQRPQQL Trigger: GAGCTGCTGGGGCCTTTGCTCAGTGAATGGACTGACGGTGAAGCATGCCAGCAAGGGGCGACTTAACACTTTCTTAAATATCTCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 90 bp | CAGTACAGACATTACCAATTGATCACCAATTCACACTCAGGTTGCTaGAGTCTTGCTAGCCCCTGTGTAGTCAGACCAGGCTTGCTAATG | + |
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Preference number: 1 (lower is better) Translates to: QYRHYQLITNSHSGC*SLASPCVVRPGLLM Trigger: CATTAGCAAGCCTGGTCTGACTACACAGGGGCTAGCAAGACTCCAGCAACCTGAGTGTGAATTGGTGATCAATTGGTAATGTCTGTACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 90 bp | GTTAGGACCCCCATTCTAACTGGCACAGGCAGAACTGGTAAAGAATaGTTTCTATCCCTTTTAGGTGCTGACTCAAGGCTGTGTAAACTG | + |
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Preference number: 1 (lower is better) Translates to: VRTPILTGTGRTGKE*FLSLLGADSRLCKL Trigger: CAGTTTACACAGCCTTGAGTCAGCACCTAAAAGGGATAGAAACCATTCTTTACCAGTTCTGCCTGTGCCAGTTAGAATGGGGGTCCTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCCTGGAACGGAGGACACACCCCACACCCGAGAGCCTCTGTTCTTGGTGTTCCCCCAACCCTGTCTaGGAGGCTCCCACAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SALERRTHPTPESLCSWCSPNPV*EAPTRQ Trigger: CTGCCTTGTGGGAGCCTCTCAGACAGGGTTGGGGGA...ACACCAAGAACAGAGGCTCTCGGGTGTGGGGTGTGTCCTCCGTTCCAGGGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGACACCCGAGACCAGCTaGCTGCTCAGGGGCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CLRPPDQGRPGLNSVSALTPETS*LLRGQQ Trigger: CTGCTGGCCCCTGAGCAGGCAGCTGGTCTCGGGTGT...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCTGGGGACTGACTGGCAGGGATAACAGGGCTCCATTGGGAAACTGCTTTGGGCGGGGAGGGCCTTaGGAAACCACTCAGCCACGT | + |
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Preference number: 2 (lower is better) Translates to: FGWGLTGRDNRAPLGNCFGRGGP*ETTQPR Trigger: ACGTGGCTGAGTGGTTTCCCAAGGCCCTCCCCGCCC...AAAGCAGTTTCCCAATGGAGCCCTGTTATCCCTGCCAGTCAGTCCCCAGCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGGCCCCAGCAGCTCTGTaGCCCATTACACACAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: CLRPPDQGRPGLNSVSALAPAAL*PITHKA Trigger: GGCTTTGTGTGTAATGGGGCACAGAGCTGCTGGGGC...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCCTGGAACGGAGGACACACCCCACACCCGAGAGCCTCTGTTCTTGGTGTGACAACTGTCCTCAGTaGAGTGACGGATGCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: SALERRTHPTPESLCSWCDNCPQ*SDGCIL Trigger: GAGGATGCATCCGTCACTGCACTGAGGACAGTTGTC...ACACCAAGAACAGAGGCTCTCGGGTGTGGGGTGTGTCCTCCGTTCCAGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGTCCTCCAGAGCCATCTaGATGGCTCCCGAGGAAACG | + |
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Preference number: 2 (lower is better) Translates to: CLRPPDQGRPGLNSVSALSSRAI*MAPEET Trigger: CGTTTCCTCGGGAGCCATCCAGATGGCTCTGGAGGA...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTGGGCAGAACACGCCTGAATTTCACCCTGCAGCGAGCTCCTTTGGTAAAGCGACTTTCCCACTCTaGCCATGGGGTCATCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RPGQNTPEFHPAASSFGKATFPL*PWGHLC Trigger: ACACAGATGACCCCATGGGCAGAGTGGGAAAGTCGC...TTTACCAAAGGAGCTCGCTGCAGGGTGAAATTCAGGCGTGTTCTGCCCAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCTGGGGACTGACTGGCAGGGATAACAGGGCTCCATTGGGAAACTGCTTTAGAGCAGCATCTCCCTaGCAACTGTCCTCAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: FGWGLTGRDNRAPLGNCFRAASP*QLSSVQ Trigger: CTGCACTGAGGACAGTTGTCAGGGAGATGCTGCTCT...AAAGCAGTTTCCCAATGGAGCCCTGTTATCCCTGCCAGTCAGTCCCCAGCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGCTTTCCCTCGGCCACATATTTCACCTACATACTAACTCCCTAGAAGCACTGTCCTTGTGCAGGTaGGAAGCCAAGAGGCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: TGLSLGHIFHLHTNSLEALSLCR*EAKRRG Trigger: ACCCCGCCTCTTGGCTTCTCACCTGCACAAGGACAG...TGCTTCTAGGGAGTTAGTATGTAGGTGAAATATGTGGCCGAGGGAAAGCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | ATTACACACAAAGCCCTGGGCTCTCACACTGCCATCTTTATTCCTGCTCACCTTGTTCCCCTTCTCCCTTaGCCTCACCCACCCACCCAT | + |
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Preference number: 2 (lower is better) Translates to: ITHKALGSHTAIFIPAHLVPLLP*PHPPTH Trigger: ATGGGTGGGTGGGTGAGGCCAAGGGAGAAGGGGAAC...AAGGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | GCAGCGAGCTCCTTTGGTAAAGAGCACCAGGTAGCAGAGACTAAAATTCAGAGGCTTCCCATTTCTTGCTaGCCAACACCACCTCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: AASSFGKEHQVAETKIQRLPISC*PTPPPP Trigger: CGGGGGAGGTGGTGTTGGCCAGCAAGAAATGGGAAG...CCTCTGAATTTTAGTCTCTGCTACCTGGTGCTCTTTACCAAAGGAGCTCGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CAA 90 bp | AACTGGCCAGGCCAGACATTACTAGTCCTTTCCCAATCCGTTGCCTaGACCAGCAAAGAGGTAACCAGCCTTCAGGCTGAGTTCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: NWPGQTLLVLSQSVA*TSKEVTSLQAEFCS Trigger: GGAACAGAACTCAGCCTGAAGGCTGGTTACCTCTTTGCTGGTCAAGGCAACGGATTGGGAAAGGACTAGTAATGTCTGGCCTGGCCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | ATTACACACAAAGCCCTGGGCTCTCACACTGCCATCTTTATTCCTGCTCACCTTCCGCTTCCCATTTCTTaGTGGCCAACACCACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ITHKALGSHTAIFIPAHLPLPIS*WPTPPP Trigger: GGGAGGTGGTGTTGGCCAGCAAGAAATGGGAAGCGG...AAGGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | TTTGGCTGGGGACTGACTGGCAGGGATAACAGGGCTCCATTGGGAAACTGCTTTCTTCCCACTACATCCTaGTCACTTCAGCCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FGWGLTGRDNRAPLGNCFLPTTS*SLQPKG Trigger: TCCTTTGGGCTGAAGTGAGCAGGATGTAGTGGGAAG...AAAGCAGTTTCCCAATGGAGCCCTGTTATCCCTGCCAGTCAGTCCCCAGCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGGGCAGAACACGCCTGAATTTCACCCTGCAGCGAGCTCCTTTGGTAAATCCATCCAAAGCAGATaGTCTCAGTCTTTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RPGQNTPEFHPAASSFGKSIQSR*SQSFFP Trigger: GGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGA...TTTACCAAAGGAGCTCGCTGCAGGGTGAAATTCAGGCGTGTTCTGCCCAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCAAAAGGGAAAAATTCCATCAACCAGCAATGGCTGCTACACCCGAGACCTCACACTCAGGTTGCTaGAGTCTTGCTAGCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AGKREKFHQPAMAATPETSHSGC*SLASPC Trigger: ACAGGGGCTAGCAAGACTCCAGCAACCTGAGTGTGA...GGTCTCGGGTGTAGCAGCCATTGCTGGTTGATGGAATTTTTCCCTTTTGCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGGTGATCGAGAAGGGGAGAAAGCCGAAGGGCGTGGTTTTCCTAATGGAGTGCCATCTTTATTCCTaGTCACCTTCAGAAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: TLVIEKGRKPKGVVFLMECHLYS*SPSEDP Trigger: GGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCA...CTCCATTAGGAAAACCACGCCCTTCGGCTTTCTCCCCTTCTCGATCACCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR TCA 90 bp | GATACCATGCCAGTAAATCCCTACAAAACATTTCCAGTTTGGCAACAAGCAGTCCTGTCCTCAGTGCAGTaGCGGATGCATCCTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: DTMPVNPYKTFPVWQQAVLSSVQ*RMHPPP Trigger: TGGGGGAGGATGCATCCGTCACTGCACTGAGGACAG...GACTGCTTGTTGCCAAACTGGAAATGTTTTGTAGGGATTTACTGGCATGGTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTTGTGCAGGTGAGAAGCCAAGAGGCGGGGTTCCAGTTAATACTGAGATACCGGTCCTGATTCCCTaGCAGTTATTGGTACTCACT | + |
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Preference number: 2 (lower is better) Translates to: CPCAGEKPRGGVPVNTEIPVLIP*QLLVLT Trigger: AGTGAGTACCAATAACTGCCAGGGAATCAGGACCGG...TATCTCAGTATTAACTGGAACCCCGCCTCTTGGCTTCTCACCTGCACAAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGGTGATCGAGAAGGGGAGAAAGCCGAAGGGCGTGGTTTTCCTAATGGAGGGAAGGATGGATGAATaGAACTTGTTTATTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TLVIEKGRKPKGVVFLMEGRMDE*NLFIPP Trigger: TGGGGGAATAAACAAGTTCCATTCATCCATCCTTCC...CTCCATTAGGAAAACCACGCCCTTCGGCTTTCTCCCCTTCTCGATCACCAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR TCA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACAACCAGCCTTCAGGCTaGGTTCTGTTCCCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNNQPSG*VLFPFS Trigger: GGAGAAGGGGAACAGAACTCAGCCTGAAGGCTGGTT...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | CATCCTGCTCACTTCAGCCCAAAGGAAAGCGCGGGGCCCAAACACAGTGATGCAAGAACTGGTAAAGAATaGTTTCTATCCCTTTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: HPAHFSPKESAGPKHSDARTGKE*FLSLLG Trigger: ACCTAAAAGGGATAGAAACCATTCTTTACCAGTTCT...TGCATCACTGTGTTTGGGCCCCGCGCTTTCCTTTGGGCTGAAGTGAGCAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CCA 90 bp | GCAGCGAGCTCCTTTGGTAAAGAGCACCAGGTAGCAGAGACTAAAATTCAGAGGGAGAGCCTCTGTTCTTaGTGTGAAACATTTGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: AASSFGKEHQVAETKIQRESLCS*CETFGF Trigger: GAAACCAAATGTTTCACACCAAGAACAGAGGCTCTC...CCTCTGAATTTTAGTCTCTGCTACCTGGTGCTCTTTACCAAAGGAGCTCGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTTGTGCAGGTGAGAAGCCAAGAGGCGGGGTTCCAGTTAATACTGAGATATTCTTTAAAACAGCCTaGTTTAACCTAACTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CPCAGEKPRGGVPVNTEIFFKTA*FNLTPR Trigger: CCTGGGAGTTAGGTTAAAGCAGGCTGTTTTAAAGAA...TATCTCAGTATTAACTGGAACCCCGCCTCTTGGCTTCTCACCTGCACAAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR GCA 90 bp | GATACCATGCCAGTAAATCCCTACAAAACATTTCCAGTTTGGCAACAAGCAGTCCCTGGGCTCTCACACTaGCATCTTTATTCCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: DTMPVNPYKTFPVWQQAVPGLSH*HLYSCS Trigger: TGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGG...GACTGCTTGTTGCCAAACTGGAAATGTTTTGTAGGGATTTACTGGCATGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR TCA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACACAGACATTACCAATTaGTCACCAATTCACACTCAG | + |
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Preference number: 2 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNTDITN*SPIHTQ Trigger: CTGAGTGTGAATTGGTGATCAATTGGTAATGTCTGT...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 72 bp | AACCAGCAATGGCTGCTACACCCGAGACCAGCTGCCTaGTCAGGGGCCAGCAGTGTAGCAGCAGGCGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: NQQWLLHPRPAA*SGASSVAAGGV Trigger: AACCCCGCCTGCTGCTACACTGCTGGCCCCTGAGCAGGCAGCTGGTCTCGGGTGTAGCAGCCATTGCTGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 72 bp | CATCAACCAGCAATGGCTGCTACACCCGAGACCAGCTaGCTGCTCAGGGGCCAGCAGTGTAGCAGCAGGCGG | + |
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Preference number: 3 (lower is better) Translates to: HQPAMAATPETS*LLRGQQCSSRR Trigger: CCGCCTGCTGCTACACTGCTGGCCCCTGAGCAGGCAGCTGGTCTCGGGTGTAGCAGCCATTGCTGGTTGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 72 bp | CCACCCGTGGGAAGCAGCCCTCATAGCCACTGCAGGTaGCTGAGACCTCCAGATCAAGGCAGACCTGGACTC | + |
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Preference number: 3 (lower is better) Translates to: PPVGSSPHSHCR*LRPPDQGRPGL Trigger: GAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCACCTGCAGTGGCTATGAGGGCTGCTTCCCACGGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 72 bp | CAGCCTCCACCCGTGGGAAGCAGCCCTCATAGCCACTaGAGGTGCCTGAGACCTCCAGATCAAGGCAGACCT | + |
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Preference number: 3 (lower is better) Translates to: QPPPVGSSPHSH*RCLRPPDQGRP Trigger: AGGTCTGCCTTGATCTGGAGGTCTCAGGCACCTGCAGTGGCTATGAGGGCTGCTTCCCACGGGTGGAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 72 bp | AGGACAGCTCACGCAGCGACTTTCCCACTCTGCCCATaGGGTCATCTGTGTCTCTCACTGGGGACTCCGCGG | + |
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Preference number: 3 (lower is better) Translates to: RTAHAATFPLCP*GHLCLSLGTPR Trigger: CCGCGGAGTCCCCAGTGAGAGACACAGATGACCCCATGGGCAGAGTGGGAAAGTCGCTGCGTGAGCTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR GCA 72 bp | CATCTCCCTGACAACTGTCCTCAGTGCAGTGACGGATaGATCCTCCCCCAACCCTGTCTGAGAGGCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: HLPDNCPQCSDG*ILPQPCLRGSH Trigger: GTGGGAGCCTCTCAGACAGGGTTGGGGGAGGATGCATCCGTCACTGCACTGAGGACAGTTGTCAGGGAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 72 bp | ATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTaGAACGGAGGACACACCCCACACCCGAGAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: IKADLDSTQCQP*NGGHTPHPRAS Trigger: AGAGGCTCTCGGGTGTGGGGTGTGTCCTCCGTTCCAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 72 bp | CTGCAGGTGCCTGAGACCTCCAGATCAAGGCAGACCTaGACTCAACTCAGTGTCAGCCCTGGAACGGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LQVPETSRSRQT*TQLSVSPGTED Trigger: GTCCTCCGTTCCAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCACCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR-3UTR CAA 90 bp | CATCCTGCTCACTTCAGCCCAAAGGAAAGCGCGGGGCCCAAACACAGTGATGCAAGGGCAGGTATGCTGTaGCCTCCGGTCCTGATTCCC | + |
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Preference number: 3 (lower is better) Translates to: HPAHFSPKESAGPKHSDARAGML*PPVLIP Trigger: GGGAATCAGGACCGGAGGCAACAGCATACCTGCCCT...TGCATCACTGTGTTTGGGCCCCGCGCTTTCCTTTGGGCTGAAGTGAGCAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR TCA 72 bp | CTTCCCATTTCTTGCTGGCCAACACCACCTCCCCCGTaGGATGTCACCTGGGAATGCCAGTTAGGACCCCCA | + |
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Preference number: 3 (lower is better) Translates to: LPISCWPTPPPP*DVTWECQLGPP Trigger: TGGGGGTCCTAACTGGCATTCCCAGGTGACATCTCACGGGGGAGGTGGTGTTGGCCAGCAAGAAATGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 72 bp | TCCCACTCTGCCCATGGGGTCATCTGTGTCTCTCACTaGGGACTCCGCGGAAATGAGTCAGGCATCCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SHSAHGVICVSH*GLRGNESGIPS Trigger: AGAAGGGATGCCTGACTCATTTCCGCGGAGTCCCCAGTGAGAGACACAGATGACCCCATGGGCAGAGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| 3UTR CCA 72 bp | CCCCAGCAGCTCTGTGCCCCATTACACACAAAGCCCTaGGCTCTCACACTGCCATCTTTATTCCTGCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: PQQLCAPLHTKP*ALTLPSLFLLT Trigger: GGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAATGGGGCACAGAGCTGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CCA 72 bp | CAGCTGGCAAAAGGGAAAAATTCCATCAACCAGCAATaGCTGCTACACCCGAGACCAGCTGCCTGCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QLAKGKNSINQQ*LLHPRPAACSG Trigger: CCCTGAGCAGGCAGCTGGTCTCGGGTGTAGCAGCCATTGCTGGTTGATGGAATTTTTCCCTTTTGCCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR TCA 72 bp | CTTCAGCCCAAAGGAAAGCGCGGGGCCCAAACACAGTaGTGCAAAGCAGCCTTCTGCTGTATAGAGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQPKGKRGAQTQ*CKAAFCCIEQH Trigger: ATGCTGCTCTATACAGCAGAAGGCTGCTTTGCATCACTGTGTTTGGGCCCCGCGCTTTCCTTTGGGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR GCA 72 bp | GCCAGGCCAGACATTACTAGTCCTTTCCCAATCCGTTaGCTTGACCAGCAAAGAGGTAACCAGCCTTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ARPDITSPFPIR*LDQQRGNQPSG Trigger: GCCTGAAGGCTGGTTACCTCTTTGCTGGTCAAGGCAACGGATTGGGAAAGGACTAGTAATGTCTGGCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR GCA 72 bp | GAAGGAAAAGAATCGAAGCAGCTTCCCACTACATCCTaGTCACTTCAGCCCAAAGGAAAGCGCGGGGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: EGKESKQLPTTS*SLQPKGKRGAQ Trigger: TTGGGCCCCGCGCTTTCCTTTGGGCTGAAGTGAGCAGGATGTAGTGGGAAGCTGCTTCGATTCTTTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTTGTGCAGGTGAGAAGCCAAGAGGCGGGGTTCCAGTTAATACTGAGATAGTGTTAAGTCGCCCCTaGCTGGCATGCTTCACCGTC | + |
|
Preference number: 3 (lower is better) Translates to: CPCAGEKPRGGVPVNTEIVLSRP*LACFTV Trigger: GACGGTGAAGCATGCCAGCAAGGGGCGACTTAACAC...TATCTCAGTATTAACTGGAACCCCGCCTCTTGGCTTCTCACCTGCACAAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CCA 72 bp | CAGACCAGGCTTGCTAATGGATCCATCCAAAGCAGATaGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACATC | + |
|
Preference number: 3 (lower is better) Translates to: QTRLANGSIQSR*SQSFFPSSRNI Trigger: GATGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCATTAGCAAGCCTGGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CCA 72 bp | CATTACCAATTGATCACCAATTCACACTCAGGTTGCTaGAGTCTTGCTAGCCCCTGTGTAGTCAGACCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HYQLITNSHSGC*SLASPCVVRPG Trigger: GCCTGGTCTGACTACACAGGGGCTAGCAAGACTCCAGCAACCTGAGTGTGAATTGGTGATCAATTGGTAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR TCA 72 bp | CTCAGTCTTTCTTCCCCTCCTCCAGAAACATCTAGATaGCTTCTAGGAAACACACCCTTCCCCATAATGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSSPPPETSR*LLGNTPFPIMP Trigger: CGGCATTATGGGGAAGGGTGTGTTTCCTAGAAGTCATCTAGATGTTTCTGGAGGAGGGGAAGAAAGACTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR TCA 72 bp | CCACAAGGCAGCCACCTTAGAAGAAGGATTCTAATTTaGCTAAGCCAGTGGATTCCGTGGTCAGCCCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PQGSHLRRRILI*LSQWIPWSAQK Trigger: TTTCTGGGCTGACCACGGAATCCACTGGCTTAGTCAAATTAGAATCCTTCTTCTAAGGTGGCTGCCTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR GCA 72 bp | ATATTTAAGAAAGTGTTAAGTCGCCCCTTGCTGGCATaGTTCACCGTCAGTCCATTCACTGAGCAAAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IFKKVLSRPLLA*FTVSPFTEQRP Trigger: GGGCCTTTGCTCAGTGAATGGACTGACGGTGAAGCATGCCAGCAAGGGGCGACTTAACACTTTCTTAAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR GCA 72 bp | AGACATTACCAATTGATCACCAATTCACACTCAGGTTaGTGGAGTCTTGCTAGCCCCTGTGTAGTCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: RHYQLITNSHSG*WSLASPCVVRP Trigger: TGGTCTGACTACACAGGGGCTAGCAAGACTCCAGCAACCTGAGTGTGAATTGGTGATCAATTGGTAATGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CCA 72 bp | CCCATTCTAACTGGCACAGGCAGAACTGGTAAAGAATaGTTTCTATCCCTTTTAGGTGCTGACTCAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PILTGTGRTGKE*FLSLLGADSRL Trigger: CAGCCTTGAGTCAGCACCTAAAAGGGATAGAAACCATTCTTTACCAGTTCTGCCTGTGCCAGTTAGAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CCA 72 bp | CACTCTGCTCTCTCAACATCTTATTCTGTGGATGGATaGATGGATGGATGGATGGATGGATGGAAGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSALSTSYSVDG*MDGWMDGWKDG Trigger: TCCATCCTTCCATCCATCCATCCATCCATCCATCCATCCATCCACAGAATAAGATGTTGAGAGAGCAGAGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR TCA 72 bp | CTACTAAACTCAGACCACAGTACAGACATTACCAATTaGTCACCAATTCACACTCAGGTTGCTGGAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLNSDHSTDITN*SPIHTQVAGVL Trigger: CAAGACTCCAGCAACCTGAGTGTGAATTGGTGATCAATTGGTAATGTCTGTACTGTGGTCTGAGTTTAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | AATGCCGCTTCCCATTTCTTGCTGGCCAACACCACCTCCCCCGTGAGATGTCACCTGCCTCGGGGGAGCTaGGGAGGGGGATGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NAASHFLLANTTSPVRCHLPRGS*GGGWQS Trigger: GGACTGCCATCCCCCTCCCCAGCTCCCCCGAGGCAG...GTGACATCTCACGGGGGAGGTGGTGTTGGCCAGCAAGAAATGGGAAGCGGCATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGGCATTTCAGGGCGGGTaGGGGCAGGGTCTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLRPPDQGRPGLNSVSALAFQGG*GQGLCH Trigger: GTGGCACAGACCCTGCCCTCACCCGCCCTGAAATGC...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | TTTGGCTGGGGACTGACTGGCAGGGATAACAGGGCTCCATTGGGAAACTGCTTTCTTCCTGGGCTCCACTaGGGCTGCAGTCGCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FGWGLTGRDNRAPLGNCFLPGLH*GCSRPG Trigger: GCCGGGGCGACTGCAGCCCCAGTGGAGCCCAGGAAG...AAAGCAGTTTCCCAATGGAGCCCTGTTATCCCTGCCAGTCAGTCCCCAGCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | TTTGGCTGGGGACTGACTGGCAGGGATAACAGGGCTCCATTGGGAAACTGCTTTCAGCTGCGGATGCGCTaGCGGGCTGGCCGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGWGLTGRDNRAPLGNCFQLRMR*RAGRFS Trigger: AGAGAACCGGCCAGCCCGCCAGCGCATCCGCAGCTG...AAAGCAGTTTCCCAATGGAGCCCTGTTATCCCTGCCAGTCAGTCCCCAGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | GCAGCGAGCTCCTTTGGTAAAGAGCACCAGGTAGCAGAGACTAAAATTCAGAGGCCCCGTGCGGCTTCCTaGGCTCCACTGGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AASSFGKEHQVAETKIQRPRAAS*APLGLQ Trigger: CTGCAGCCCCAGTGGAGCCCAGGAAGCCGCACGGGG...CCTCTGAATTTTAGTCTCTGCTACCTGGTGCTCTTTACCAAAGGAGCTCGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | ATTACACACAAAGCCCTGGGCTCTCACACTGCCATCTTTATTCCTGCTCACCTTAGACGCAGCTGCGGATaGGCTGGCGGGCTGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITHKALGSHTAIFIPAHLRRSCG*AGGLAG Trigger: ACCGGCCAGCCCGCCAGCGCATCCGCAGCTGCGTCT...AAGGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCTGGAACGGAGGACACACCCCACACCCGAGAGCCTCTGTTCTTGGTGTCAGTTCACCCACCAATaGTTGGCGATGTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SALERRTHPTPESLCSWCQFTHQ*LAMSSM Trigger: CATCGAGGACATCGCCAACCATTGGTGGGTGAACTG...ACACCAAGAACAGAGGCTCTCGGGTGTGGGGTGTGTCCTCCGTTCCAGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | ATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACACAGCAGAGACGCAGCTaGGGATGCGCTGGCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MDPSKADGLSLSSPPPETQQRRS*GCAGGL Trigger: CAGCCCGCCAGCGCATCCGCAGCTGCGTCTCTGCTG...TGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | CTTGCTAATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCCGGCAGGACAGGCTGTaGGAAGTTCCCCTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LANGSIQSRWSQSFFPSSRQDRL*EVPLAG Trigger: CCCAGCCAGGGGAACTTCCCACAGCCTGTCCTGCCG...GGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCATTAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGGATCCGTGCCAAGAGTaGAGACTCAGAGTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLRPPDQGRPGLNSVSALDPCQE*RLRVRK Trigger: CTTCCTGACTCTGAGTCTCCACTCTTGGCACGGATC...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCTCACTTCAGCCCAAAGGAAAGCGCGGGGCCCAAACACAGTGATGCAATAAAGCCAGTGCTGTaGGAGCGGTGTTCGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPAHFSPKESAGPKHSDAIKPVL*ERCSLL Trigger: CAACAGCGAACACCGCTCCCACAGCACTGGCTTTAT...TGCATCACTGTGTTTGGGCCCCGCGCTTTCCTTTGGGCTGAAGTGAGCAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CAA 72 bp | AAACACACCCTTCCCCATAATGCCGCTTCCCATTTCTaGCTGGCCAACACCACCTCCCCCGTGAGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KHTLPHNAASHF*LANTTSPVRCH Trigger: GTGACATCTCACGGGGGAGGTGGTGTTGGCCAGCAAGAAATGGGAAGCGGCATTATGGGGAAGGGTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGTGATCGAGAAGGGGAGAAAGCCGAAGGGCGTGGTTTTCCTAATGGAGAAGTTGTGTTTGTGGTaGTGTCGCTTCACCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLVIEKGRKPKGVVFLMEKLCLW*CRFTPC Trigger: GCACGGGGTGAAGCGACATCACCACAAACACAACTT...CTCCATTAGGAAAACCACGCCCTTCGGCTTTCTCCCCTTCTCGATCACCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | CATCCTGCTCACTTCAGCCCAAAGGAAAGCGCGGGGCCCAAACACAGTGATGCACGGATGAGGTTTTTGTaGTCAAAGCCATCGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPAHFSPKESAGPKHSDARMRFL*SKPSKG Trigger: GCCCTTCGATGGCTTTGATCACAAAAACCTCATCCG...TGCATCACTGTGTTTGGGCCCCGCGCTTTCCTTTGGGCTGAAGTGAGCAGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGTGATCGAGAAGGGGAGAAAGCCGAAGGGCGTGGTTTTCCTAATGGAGGCTGCGCTCTGGGGATaGATAGTAGCCAGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVIEKGRKPKGVVFLMEAALWG*IVARFS Trigger: AGAGAATCTGGCTACTATTCATCCCCAGAGCGCAGC...CTCCATTAGGAAAACCACGCCCTTCGGCTTTCTCCCCTTCTCGATCACCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | ATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACATGTCGCTTCACCCCGTaGGGCTTCCTGGGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MDPSKADGLSLSSPPPETCRFTP*GFLGST Trigger: AGTGGAGCCCAGGAAGCCGCACGGGGTGAAGCGACA...TGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | ACCCTGGTGATCGAGAAGGGGAGAAAGCCGAAGGGCGTGGTTTTCCTAATGGAGTCTTCAGGATGCCCTTaGGCCTCTTGGAACTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVIEKGRKPKGVVFLMESSGCP*ASWNSA Trigger: AGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGA...CTCCATTAGGAAAACCACGCCCTTCGGCTTTCTCCCCTTCTCGATCACCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGGGGTCTTTTTCAAGATaGCTTTCTTGGGCATCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLRPPDQGRPGLNSVSALGSFSR*LSWASW Trigger: CCACGATGCCCAAGAAAGGCATCTTGAAAAAGACCC...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCTCACTTCAGCCCAAAGGAAAGCGCGGGGCCCAAACACAGTGATGCAAAGAACTTGTCCTTCTaGTACAGGTTGGAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPAHFSPKESAGPKHSDAKNLSF*YRLESP Trigger: TGGGCTCTCCAACCTGTACCAGAAGGACAAGTTCTT...TGCATCACTGTGTTTGGGCCCCGCGCTTTCCTTTGGGCTGAAGTGAGCAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | CTATACACCTCCAAGCGCCAGAGCCACTTCTCTACCTATAGATTTTCCTCCCTTCAGCCTGCAGCCCCGTaGAACGGTGATGCCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LYTSKRQSHFSTYRFSSLQPAAP*NGDANR Trigger: TCGATTGGCATCACCGTTCCACGGGGCTGCAGGCTG...AAGGGAGGAAAATCTATAGGTAGAGAAGTGGCTCTGGCGCTTGGAGGTGTATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACTGTGGGAAGTTCCCCTaGCTGGGTCTGGGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNCGKFP*LGLGEG Trigger: CCCCTCCCCCAGACCCAGCCAGGGGAACTTCCCACA...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CAA 72 bp | GGCCAGACATTACTAGTCCTTTCCCAATCCGTTGCCTaGACCAGCAAAGAGGTAACCAGCCTTCAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQTLLVLSQSVA*TSKEVTSLQAE Trigger: CTCAGCCTGAAGGCTGGTTACCTCTTTGCTGGTCAAGGCAACGGATTGGGAAAGGACTAGTAATGTCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | ATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACAAGCAACCACTCGGCCTaGAAACCTCTCGGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MDPSKADGLSLSSPPPETSNHSA*KPLGGS Trigger: AGAGCCACCGAGAGGTTTTCAGGCCGAGTGGTTGCT...TGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGTGATCGAGAAGGGGAGAAAGCCGAAGGGCGTGGTTTTCCTAATGGAGGGTGTCTCAAAGTCCTaGAGCTGGAGGAAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVIEKGRKPKGVVFLMEGVSKS*SWRKFS Trigger: TGAAAACTTCCTCCAGCTTCAGGACTTTGAGACACC...CTCCATTAGGAAAACCACGCCCTTCGGCTTTCTCCCCTTCTCGATCACCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | ATTACACACAAAGCCCTGGGCTCTCACACTGCCATCTTTATTCCTGCTCACCTTTGCCCTTGGGCCTCTTaGAACTCAGCTTGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITHKALGSHTAIFIPAHLCPWAS*NSAWMG Trigger: GCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCA...AAGGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | GCAGCGAGCTCCTTTGGTAAAGAGCACCAGGTAGCAGAGACTAAAATTCAGAGGTCTCGGTGGCTCTCTTaGCTTTGCCGTAGGTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AASSFGKEHQVAETKIQRSRWLS*LCRRYL Trigger: AAGGTACCTACGGCAAAGTCAAGAGAGCCACCGAGA...CCTCTGAATTTTAGTCTCTGCTACCTGGTGCTCTTTACCAAAGGAGCTCGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACTCAGCATCCACCGGATaGGTCCCCGAGCATCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNSASTG*VPEHLR Trigger: CCTCAGATGCTCGGGGACTCATCCGGTGGATGCTGA...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGCTCCCACAAAATGTTTaGAAGAACTTGTCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLRPPDQGRPGLNSVSALLPQNV*KNLSFW Trigger: CCAGAAGGACAAGTTCTTGCAAACATTTTGTGGGAG...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAACCAGAAAGTCACCACCACCAGACTTATTTCGGTAGCAGAGTTCAGCATCATCTGAGGGTTGTGTaGGCTCCCGGTACTCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKPESHHHQTYFGSRVQHHLRVV*APGTLR Trigger: GCGGAGAGTACCGGGAGCCCACACAACCCTCAGATG...ATGCTGAACTCTGCTACCGAAATAAGTCTGGTGGTGGTGACTTTCTGGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | GCAGCGAGCTCCTTTGGTAAAGAGCACCAGGTAGCAGAGACTAAAATTCAGAGGGGAACTCAGCTTGGATaGGCTTTCAGGTACGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AASSFGKEHQVAETKIQRGTQLG*AFRYGV Trigger: GACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCC...CCTCTGAATTTTAGTCTCTGCTACCTGGTGCTCTTTACCAAAGGAGCTCGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CAA 72 bp | CAGTTTGGCAACAAGCAGTCAGTCCATCATTCACATTaGTACTCAAGACAGCAGGCCTGGGCAGAACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFGNKQSVHHSH*YSRQQAWAEHA Trigger: GGCGTGTTCTGCCCAGGCCTGCTGTCTTGAGTACAAATGTGAATGATGGACTGACTGCTTGTTGCCAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | ATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACAAGCGGTGTTCGCTGTTaGTCCGTTTCTTCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MDPSKADGLSLSSPPPETSGVRC*SVSSGC Trigger: GCATCCTGAAGAAACGGAGCAACAGCGAACACCGCT...TGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | CTTGCTAATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGTCGAAAGAGTCGCTaGACAGGACACTGTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LANGSIQSRWSQSFFPSSSRKSR*TGHCHH Trigger: GTGATGACAGTGTCCTGTCCAGCGACTCTTTCGACT...GGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCATTAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTGTGCAGGTGAGAAGCCAAGAGGCGGGGTTCCAGTTAATACTGAGATATCAAGATGCCTTTCTTaGGCATCGTGGCAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CPCAGEKPRGGVPVNTEISRCLS*ASWQTV Trigger: AACAGTCTGCCACGATGCCCAAGAAAGGCATCTTGA...TATCTCAGTATTAACTGGAACCCCGCCTCTTGGCTTCTCACCTGCACAAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | ATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACACATCGTCCATATCAGTaGGAAGGGAGAAGCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MDPSKADGLSLSSPPPETHRPYQ*EGRSYC Trigger: ACAGTAGCTTCTCCCTTCTCACTGATATGGACGATG...TGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | AGAAAACCAGAAAGTCACCACCACCAGACTTATTTCGGTAGCAGAGTTCAGCATCACAGTCACAGACGCTaGTCTTGTAGCCCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKPESHHHQTYFGSRVQHHSHRR*SCSPSS Trigger: TGAACTGGGGCTACAAGAGCAGCGTCTGTGACTGTG...ATGCTGAACTCTGCTACCGAAATAAGTCTGGTGGTGGTGACTTTCTGGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | GATACCATGCCAGTAAATCCCTACAAAACATTTCCAGTTTGGCAACAAGCAGTCGTTCCGAGGACTCGCTaGGCTCTGGGGATGAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTMPVNPYKTFPVWQQAVVPRTR*ALGMNS Trigger: ACTATTCATCCCCAGAGCGCAGCGAGTCCTCGGAAC...GACTGCTTGTTGCCAAACTGGAAATGTTTTGTAGGGATTTACTGGCATGGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CCA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACGGGCGACGCATAGAGTaGGCTCCCACAAAATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNGRRIE*APTKCL Trigger: CAAACATTTTGTGGGAGCCCACTCTATGCGTCGCCC...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | ATTACACACAAAGCCCTGGGCTCTCACACTGCCATCTTTATTCCTGCTCACCTTGTCCGGCACAAATCTTaGTCCATTTTGAAAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITHKALGSHTAIFIPAHLVRHKS*SILKGD Trigger: ATCCCCTTTCAAAATGGAGCAAGATTTGTGCCGGAC...AAGGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | ATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACATACTATGTTTTAAGATaGCCTTCCTCCGGCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: MDPSKADGLSLSSPPPETYYVLR*PSSGRT Trigger: TGTCCTGCCGGAGGAAGGGCATCTTAAAACATAGTA...TGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | GATACCATGCCAGTAAATCCCTACAAAACATTTCCAGTTTGGCAACAAGCAGTCATCTCTCGTCTGATGTaGACCATGTCTAGCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTMPVNPYKTFPVWQQAVISRLM*TMSSSS Trigger: GGACGAGCTAGACATGGTTCACATCAGACGAGAGAT...GACTGCTTGTTGCCAAACTGGAAATGTTTTGTAGGGATTTACTGGCATGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | ATTACACACAAAGCCCTGGGCTCTCACACTGCCATCTTTATTCCTGCTCACCTTGCATCGTTCCATAAATaGGAGTGTAAAGCAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ITHKALGSHTAIFIPAHLASFHK*ECKARH Trigger: GTGTCTTGCTTTACACTCTCATTTATGGAACGATGC...AAGGTGAGCAGGAATAAAGATGGCAGTGTGAGAGCCCAGGGCTTTGTGTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR GCA 90 bp | CTTGCTAATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCCACCATCTGAGTACCTaGTACTATGTTTTAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LANGSIQSRWSQSFFPSSHHLST*YYVLRC Trigger: GCATCTTAAAACATAGTAGCAGGTACTCAGATGGTG...GGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCATTAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR TCA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACTCTCAATCTCTCGTCTaGTGTGAACCATGTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNSQSLV*CEPCLA Trigger: AGCTAGACATGGTTCACATCAGACGAGAGATTGAGA...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CAA 72 bp | AATACTGAGATATTTAAGAAAGTGTTAAGTCGCCCCTaGCTGGCATGCTTCACCGTCAGTCCATTCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTEIFKKVLSRP*LACFTVSPFTE Trigger: CTCAGTGAATGGACTGACGGTGAAGCATGCCAGCAAGGGGCGACTTAACACTTTCTTAAATATCTCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CAA 72 bp | TCTACTAAACTCAGACCACAGTACAGACATTACCAATaGATCACCAATTCACACTCAGGTTGCTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STKLRPQYRHYQ*ITNSHSGCWSL Trigger: AAGACTCCAGCAACCTGAGTGTGAATTGGTGATCAATTGGTAATGTCTGTACTGTGGTCTGAGTTTAGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| 3UTR CAA 72 bp | TACCATGCCAGTAAATCCCTACAAAACATTTCCAGTTaGGCAACAAGCAGTCAGTCCATCATTCACATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YHASKSLQNISS*ATSSQSIIHIC Trigger: ACAAATGTGAATGATGGACTGACTGCTTGTTGCCAAACTGGAAATGTTTTGTAGGGATTTACTGGCATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | TTTGTGGTGATGTCGCTTCACCCCGTGCGGCTTCCTGGGCTCCACTaGGGCTGCAGTCGCCCCGGCCACCGCCTCCAGCGGAGAGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FVVMSLHPVRLPGLH*GCSRPGHRLQRRAR Trigger: CCGGGCTCTCCGCTGGAGGCGGTGGCCGGGGCGACTGCAGCCCCAGTGGAGCCCAGGAAGCCGCACGGGGTGAAGCGACATCACCACAAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS TCA 90 bp | GCGACTGTAGCTCCGAGAGATGCCATCGGAGGGGACACCGGGAGGTaGCAAGGATTCCAGTGTGGGCATTTCAGGGCGGGTGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATVAPRDAIGGDTGR*QGFQCGHFRAGEGR Trigger: CCTGCCCTCACCCGCCCTGAAATGCCCACACTGGAATCCTTGTCACCTCCCGGTGTCCCCTCCGATGGCATCTCTCGGAGCTACAGTCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS TCA 90 bp | CTTCAGCCTCAGCCTGCAGCCCCGTGGAACGGTGATGCCAATCGATaGTCCGTGCCAAGAGTGGAGACTCAGAGTCAGGAAGGGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQPQPAAPWNGDANR*SVPRVETQSQEGHH Trigger: GTGATGCCCTTCCTGACTCTGAGTCTCCACTCTTGGCACGGATCATCGATTGGCATCACCGTTCCACGGGGCTGCAGGCTGAGGCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS TCA 90 bp | CTGGCCAGACTGGGGAAAGTCGTTCTCTTTCTTGGACTTCTTCAGTaGCCGCTGCCGCTCCAACACAACCTCAGAGGCCCCGGGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LARLGKVVLFLGLLQ*PLPLQHNLRGPGFG Trigger: GCCAAACCCGGGGCCTCTGAGGTTGTGTTGGAGCGGCAGCGGTCACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS GCA 90 bp | GACTGGGGAAAGTCGTTCTCTTTCTTGGACTTCTTCAGTGACCGCTaGCGCTCCAACACAACCTCAGAGGCCCCGGGTTTGGCCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: DWGKSFSFLDFFSDR*RSNTTSEAPGLARP Trigger: GGGTCTGGCCAAACCCGGGGCCTCTGAGGTTGTGTTGGAGCGGCAGCGGTCACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS GCA 90 bp | CTGAGTCACATCGTCCATATCAGTGAGAAGGGAGAAGCTACTGTCTaGCAGCCGCTTCAGGTACTGGGGCCGGGGCCGGTTGTGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHIVHISEKGEATV*QPLQVLGPGPVVWC Trigger: ACACCACACAACCGGCCCCGGCCCCAGTACCTGAAGCGGCTGGCAGACAGTAGCTTCTCCCTTCTCACTGATATGGACGATGTGACTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS TCA 90 bp | CACCGGGAGGTGACAAGGATTCCAGTGTGGGCATTTCAGGGCGGGTaGGGGCAGGGTCTGTGCCACCATCTGAGTACCTGCTACTATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HREVTRIPVWAFQGG*GQGLCHHLSTCYYV Trigger: AACATAGTAGCAGGTACTCAGATGGTGGCACAGACCCTGCCCTCACCCGCCCTGAAATGCCCACACTGGAATCCTTGTCACCTCCCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS GCA 90 bp | CTCAGCCTGCAGCCCCGTGGAACGGTGATGCCAATCGATGATCCGTaGCAAGAGTGGAGACTCAGAGTCAGGAAGGGCATCACAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSLQPRGTVMPIDDP*QEWRLRVRKGITVT Trigger: TGTGACTGTGATGCCCTTCCTGACTCTGAGTCTCCACTCTTGGCACGGATCATCGATTGGCATCACCGTTCCACGGGGCTGCAGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS GCA 90 bp | AGTCCTGAAGCTGGAGGAAGTTTTCAGCAGAGACGCAGCTGCGGATaGGCTGGCGGGCTGGCCGGTTCTCTTGAAGCTCTAACAAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPEAGGSFQQRRSCG*AGGLAGSLEALTSR Trigger: TCGACTTGTTAGAGCTTCAAGAGAACCGGCCAGCCCGCCAGCGCATCCGCAGCTGCGTCTCTGCTGAAAACTTCCTCCAGCTTCAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | CAGCCCCGTGGAACGGTGATGCCAATCGATGATCCGTGCCAAGAGTaGAGACTCAGAGTCAGGAAGGGCATCACAGTCACAGACGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPRGTVMPIDDPCQE*RLRVRKGITVTDAA Trigger: AGCAGCGTCTGTGACTGTGATGCCCTTCCTGACTCTGAGTCTCCACTCTTGGCACGGATCATCGATTGGCATCACCGTTCCACGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | GGTGTTCGCTGTTGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTTaGAACTCAGCTTGGATGGGCTTTCAGGTACGGAGTCCTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVRCCSVSSGCPWAS*NSAWMGFQVRSPGQ Trigger: CTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS GCA 90 bp | CAGTGCTGTGGGAGCGGTGTTCGCTGTTGCTCCGTTTCTTCAGGATaGCCTTGGGCCTCTTGGAACTCAGCTTGGATGGGCTTTCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QCCGSGVRCCSVSSG*PWASWNSAWMGFQV Trigger: TACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACCGCTCCCACAGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS GCA 90 bp | CAGGGTCTGTGCCACCATCTGAGTACCTGCTACTATGTTTTAAGATaGCCTTCCTCCGGCAGGACAGGCTGTGGGAAGTTCCCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGLCHHLSTCYYVLR*PSSGRTGCGKFPWL Trigger: CAGCCAGGGGAACTTCCCACAGCCTGTCCTGCCGGAGGAAGGGCATCTTAAAACATAGTAGCAGGTACTCAGATGGTGGCACAGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | CAGGTACGGAGTCCTGGCCAGACTGGGGAAAGTCGTTCTCTTTCTTaGACTTCTTCAGTGACCGCTGCCGCTCCAACACAACCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QVRSPGQTGESRSLS*TSSVTAAAPTQPQR Trigger: CCTCTGAGGTTGTGTTGGAGCGGCAGCGGTCACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | CCGTTTCTTCAGGATGCCCTTGGGCCTCTTGGAACTCAGCTTGGATaGGCTTTCAGGTACGGAGTCCTGGCCAGACTGGGGAAAGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PFLQDALGPLGTQLG*AFRYGVLARLGKVV Trigger: AACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | TGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTTGGAACTCAGCTTaGATGGGCTTTCAGGTACGGAGTCCTGGCCAGACTGGGGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSGCPWASWNSA*MGFQVRSPGQTGES Trigger: ACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | TGTGGGAGCGGTGTTCGCTGTTGCTCCGTTTCTTCAGGATGCCCTTaGGCCTCTTGGAACTCAGCTTGGATGGGCTTTCAGGTACGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CGSGVRCCSVSSGCP*ASWNSAWMGFQVRS Trigger: ACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACCGCTCCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | AATGCCGCTTCCCATTTCTTGCTGGCCAACACCACCTCCCCCGTGAGATGTCACTTCACCCACCAATGGTaGGCGATGTCCTCGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NAASHFLLANTTSPVRCHFTHQW*AMSSMV Trigger: CACCATCGAGGACATCGCCAACCATTGGTGGGTGAA...GTGACATCTCACGGGGGAGGTGGTGTTGGCCAGCAAGAAATGGGAAGCGGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS GCA 90 bp | AGAGTGGAGACTCAGAGTCAGGAAGGGCATCACAGTCACAGACGCTaGTCTTGTAGCCCCAGTTCACCCACCAATGGTTGGCGATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RVETQSQEGHHSHRR*SCSPSSPTNGWRCP Trigger: AGGACATCGCCAACCATTGGTGGGTGAACTGGGGCTACAAGAGCAGCGTCTGTGACTGTGATGCCCTTCCTGACTCTGAGTCTCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | GATGGTAAGGCAGGGCTCACAATGCCTTCGATAAAGCCAGTGCTGTaGGAGCGGTGTTCGCTGTTGCTCCGTTTCTTCAGGATGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGKAGLTMPSIKPVL*ERCSLLLRFFRMPL Trigger: CAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACCGCTCCCACAGCACTGGCTTTATCGAAGGCATTGTGAGCCCTGCCTTACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | GAACTCAGCTTGGATGGGCTTTCAGGTACGGAGTCCTGGCCAGACTaGGGAAAGTCGTTCTCTTTCTTGGACTTCTTCAGTGACCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELSLDGLSGTESWPD*GKSFSFLDFFSDRC Trigger: GCAGCGGTCACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | TGCCTGAGACCTCCAGATCAAGGCAGACCTGGACTCAACTCAGTGTCAGCCCTGTTCAAGATGCCTTTCTaGGGCATCGTGGCAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLRPPDQGRPGLNSVSALFKMPF*GIVADC Trigger: ACAGTCTGCCACGATGCCCAAGAAAGGCATCTTGAA...CAGGGCTGACACTGAGTTGAGTCCAGGTCTGCCTTGATCTGGAGGTCTCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS TCA 90 bp | ATCGTTGCTGTCCAGCAGTTCCGAGGACTCGCTGCGCTCTGGGGATaGATAGTAGCCAGATTCTCTCTGCTGGGTCTTTTTCAAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVAVQQFRGLAALWG*IVARFSLLGLFQDA Trigger: GGCATCTTGAAAAAGACCCAGCAGAGAGAATCTGGCTACTATTCATCCCCAGAGCGCAGCGAGTCCTCGGAACTGCTGGACAGCAACGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS CCA 90 bp | GGCCTCTTGGAACTCAGCTTGGATGGGCTTTCAGGTACGGAGTCCTaGCCAGACTGGGGAAAGTCGTTCTCTTTCTTGGACTTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLLELSLDGLSGTES*PDWGKSFSFLDFFS Trigger: ACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS TCA 90 bp | TCTCCAGCGCTTTCTTATACACCTGAGTCACATCGTCCATATCAGTaGGAAGGGAGAAGCTACTGTCTGCCAGCCGCTTCAGGTACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPALSYTPESHRPYQ*EGRSYCLPAASGTG Trigger: CCCAGTACCTGAAGCGGCTGGCAGACAGTAGCTTCTCCCTTCTCACTGATATGGACGATGTGACTCAGGTGTATAAGAAAGCGCTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAACCAGAAAGTCACCACCACCAGACTTATTTCGGTAGCAGAGTTCAGCATGCCAGACCCTTCATCTaGGCTTCAGCCTCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKPESHHHQTYFGSRVQHARPFI*ASASAC Trigger: GCAGGCTGAGGCTGAAGCCAAGATGAAGGGTCTGGC...ATGCTGAACTCTGCTACCGAAATAAGTCTGGTGGTGGTGACTTTCTGGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | GCAGCGAGCTCCTTTGGTAAAGAGCACCAGGTAGCAGAGACTAAAATTCAGAGGCTCTTGGAACTCAGCTaGGATGGGCTTTCAGGTACG | + |
|
Preference number: 5 (lower is better) Translates to: AASSFGKEHQVAETKIQRLLELS*DGLSGT Trigger: CGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAG...CCTCTGAATTTTAGTCTCTGCTACCTGGTGCTCTTTACCAAAGGAGCTCGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACATGCCCTTGGGCCTCTaGGAACTCAGCTTGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNMPLGL*ELSLDG Trigger: CCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCAT...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | AATGCCGCTTCCCATTTCTTGCTGGCCAACACCACCTCCCCCGTGAGATGTCACATCTTAATGTTGCAGTaGTCATCAAGCAGTATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NAASHFLLANTTSPVRCHILMLQ*SSSSMF Trigger: GAACATACTGCTTGATGACAACTGCAACATTAAGAT...GTGACATCTCACGGGGGAGGTGGTGTTGGCCAGCAAGAAATGGGAAGCGGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAACCAGAAAGTCACCACCACCAGACTTATTTCGGTAGCAGAGTTCAGCATTTCTTCAGGATGCCCTaGGGCCTCTTGGAACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKPESHHHQTYFGSRVQHFFRMP*GLLELS Trigger: GCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAA...ATGCTGAACTCTGCTACCGAAATAAGTCTGGTGGTGGTGACTTTCTGGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAACCAGAAAGTCACCACCACCAGACTTATTTCGGTAGCAGAGTTCAGCATGAGCGGTGTTCGCTGTaGCTCCGTTTCTTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKPESHHHQTYFGSRVQHERCSL*LRFFRM Trigger: CATCCTGAAGAAACGGAGCAACAGCGAACACCGCTC...ATGCTGAACTCTGCTACCGAAATAAGTCTGGTGGTGGTGACTTTCTGGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | TTTGGCTGGGGACTGACTGGCAGGGATAACAGGGCTCCATTGGGAAACTGCTTTTCAGCAATCTTAATGTaGCAGTTGTCATCAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FGWGLTGRDNRAPLGNCFSAILM*QLSSSS Trigger: ACTGCTTGATGACAACTGCAACATTAAGATTGCTGA...AAAGCAGTTTCCCAATGGAGCCCTGTTATCCCTGCCAGTCAGTCCCCAGCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
||
| CDS-3UTR CAA 90 bp | CACACTGCCATCTTTATTCCTGCTCACCTTCAGAAGATCCCACTAAAGAAGAACTCCTTCTGGTACAGGTaGGAGAGCCCAAAGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTAIFIPAHLQKIPLKKNSFWYR*ESPKSA Trigger: TGCTGACTTTGGGCTCTCCAACCTGTACCAGAAGGA...GTTCTTCTTTAGTGGGATCTTCTGAAGGTGAGCAGGAATAAAGATGGCAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS-3UTR CAA 90 bp | TGGTTTCTATCCCTTTTAGGTGCTGACTCAAGGCTGTGTAAACTGGCCAGGCCAAATGTTTGCAAGAACTaGTCCTTCTGGTACAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: WFLSLLGADSRLCKLARPNVCKN*SFWYRL Trigger: CAACCTGTACCAGAAGGACAAGTTCTTGCAAACATT...TGGCCTGGCCAGTTTACACAGCCTTGAGTCAGCACCTAAAAGGGATAGAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS-3UTR CAA 90 bp | ATGGATCCATCCAAAGCAGATGGTCTCAGTCTTTCTTCCCCTCCTCCAGAAACAGCTCCCACAAAATGTTaGCAAGAACTTGTCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: MDPSKADGLSLSSPPPETAPTKC*QELVLL Trigger: CAGAAGGACAAGTTCTTGCAAACATTTTGTGGGAGC...TGTTTCTGGAGGAGGGGAAGAAAGACTGAGACCATCTGCTTTGGATGGATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS-3UTR CAA 90 bp | AGAAAACCAGAAAGTCACCACCACCAGACTTATTTCGGTAGCAGAGTTCAGCATTCATACAGCTCTCCTTaGCTGGCATATTCCATGATG | + |
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Preference number: 5 (lower is better) Translates to: RKPESHHHQTYFGSRVQHSYSSP*LAYSMM Trigger: CATCATGGAATATGCCAGCAAAGGAGAGCTGTATGA...ATGCTGAACTCTGCTACCGAAATAAGTCTGGTGGTGGTGACTTTCTGGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | ATGTCGCTTCACCCCGTGCGGCTTCCTGGGCTCCACTaGGGCTGCAGTCGCCCCGGCCACCGCCTCCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: MSLHPVRLPGLH*GCSRPGHRLQR Trigger: CCGCTGGAGGCGGTGGCCGGGGCGACTGCAGCCCCAGTGGAGCCCAGGAAGCCGCACGGGGTGAAGCGACAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS TCA 72 bp | GCTCCGAGAGATGCCATCGGAGGGGACACCGGGAGGTaGCAAGGATTCCAGTGTGGGCATTTCAGGGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: APRDAIGGDTGR*QGFQCGHFRAG Trigger: ACCCGCCCTGAAATGCCCACACTGGAATCCTTGTCACCTCCCGGTGTCCCCTCCGATGGCATCTCTCGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | GCTGCCGCTCCAACACAACCTCAGAGGCCCCGGGTTTaGCCAGACCCTTCATCTTGGCTTCAGCCTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: AAAPTQPQRPRV*PDPSSWLQPQP Trigger: AGGCTGAGGCTGAAGCCAAGATGAAGGGTCTGGCCAAACCCGGGGCCTCTGAGGTTGTGTTGGAGCGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | AGGGAGAAGCTACTGTCTGCCAGCCGCTTCAGGTACTaGGGCCGGGGCCGGTTGTGTGGTGTCTCAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: REKLLSASRFRY*GRGRLCGVSKS Trigger: GGACTTTGAGACACCACACAACCGGCCCCGGCCCCAGTACCTGAAGCGGCTGGCAGACAGTAGCTTCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS TCA 72 bp | CTCTGCGATCGGGATTCACCATCAGCATCCACCGGATaGGTCCCCGAGCATCTGAGGGTTGTGTGGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LCDRDSPSASTG*VPEHLRVVWAP Trigger: GGGAGCCCACACAACCCTCAGATGCTCGGGGACTCATCCGGTGGATGCTGATGGTGAATCCCGATCGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020220.15 ENSMUST00000129355.2 |
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| CDS TCA 72 bp | CAGCTGCGGATGCGCTGGCGGGCTGGCCGGTTCTCTTaGAGCTCTAACAAGTCGAAAGAGTCGCTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: QLRMRWRAGRFS*SSNKSKESLDR Trigger: CCTGTCCAGCGACTCTTTCGACTTGTTAGAGCTTCAAGAGAACCGGCCAGCCCGCCAGCGCATCCGCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | GCTGGAGGAAGTTTTCAGCAGAGACGCAGCTGCGGATaGGCTGGCGGGCTGGCCGGTTCTCTTGAAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: AGGSFQQRRSCG*AGGLAGSLEAL Trigger: TAGAGCTTCAAGAGAACCGGCCAGCCCGCCAGCGCATCCGCAGCTGCGTCTCTGCTGAAAACTTCCTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | CCTGAAGCTGGAGGAAGTTTTCAGCAGAGACGCAGCTaGGGATGCGCTGGCGGGCTGGCCGGTTCTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: PEAGGSFQQRRS*GCAGGLAGSLE Trigger: TTCAAGAGAACCGGCCAGCCCGCCAGCGCATCCGCAGCTGCGTCTCTGCTGAAAACTTCCTCCAGCTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | CAGGATGCCCTTGGGCCTCTTGGAACTCAGCTTGGATaGGCTTTCAGGTACGGAGTCCTGGCCAGACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QDALGPLGTQLG*AFRYGVLARLG Trigger: CCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | ATCGTCCATATCAGTGAGAAGGGAGAAGCTACTGTCTaGCAGCCGCTTCAGGTACTGGGGCCGGGGCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: IVHISEKGEATV*QPLQVLGPGPV Trigger: AACCGGCCCCGGCCCCAGTACCTGAAGCGGCTGGCAGACAGTAGCTTCTCCCTTCTCACTGATATGGACGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 90 bp | CGGTGTTCGCTGTTGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTaGGAACTCAGCTTGGATGGGCTTTCAGGTACGGAGTCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RCSLLLRFFRMPLGL*ELSLDGLSGTESWP Trigger: TGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS TCA 72 bp | CAGCCTGCAGCCCCGTGGAACGGTGATGCCAATCGATaGTCCGTGCCAAGAGTGGAGACTCAGAGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: QPAAPWNGDANR*SVPRVETQSQE Trigger: TTCCTGACTCTGAGTCTCCACTCTTGGCACGGATCATCGATTGGCATCACCGTTCCACGGGGCTGCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | CAGCCCCGTGGAACGGTGATGCCAATCGATGATCCGTaGCAAGAGTGGAGACTCAGAGTCAGGAAGGGCATC | + |
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Preference number: 6 (lower is better) Translates to: QPRGTVMPIDDP*QEWRLRVRKGI Trigger: GATGCCCTTCCTGACTCTGAGTCTCCACTCTTGGCACGGATCATCGATTGGCATCACCGTTCCACGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | CCCAGTTCACCCACCAATGGTTGGCGATGTCCTCGATaGTGGCTCTGCGATCGGGATTCACCATCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: PSSPTNGWRCPR*WLCDRDSPSAS Trigger: GGATGCTGATGGTGAATCCCGATCGCAGAGCCACCATCGAGGACATCGCCAACCATTGGTGGGTGAACTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 90 bp | TTGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTTGGAACTCAGCTaGGATGGGCTTTCAGGTACGGAGTCCTGGCCAGACTGGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLRFFRMPLGLLELS*DGLSGTESWPDWGK Trigger: CTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | AGTTCACCCACCAATGGTTGGCGATGTCCTCGATGGTaGCTCTGCGATCGGGATTCACCATCAGCATCCACC | + |
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Preference number: 6 (lower is better) Translates to: SSPTNGWRCPRW*LCDRDSPSAST Trigger: GGTGGATGCTGATGGTGAATCCCGATCGCAGAGCCACCATCGAGGACATCGCCAACCATTGGTGGGTGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020220.15 ENSMUST00000129355.2 |
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| CDS CCA 72 bp | GCAGGGCTCACAATGCCTTCGATAAAGCCAGTGCTGTaGGAGCGGTGTTCGCTGTTGCTCCGTTTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: AGLTMPSIKPVL*ERCSLLLRFFR Trigger: CCTGAAGAAACGGAGCAACAGCGAACACCGCTCCCACAGCACTGGCTTTATCGAAGGCATTGTGAGCCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 72 bp | TCGATAAAGCCAGTGCTGTGGGAGCGGTGTTCGCTGTaGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SIKPVLWERCSL*LRFFRMPLGLL Trigger: CAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACCGCTCCCACAGCACTGGCTTTATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 90 bp | TCAGGTACGGAGTCCTGGCCAGACTGGGGAAAGTCGTTCTCTTTCTaGGACTTCTTCAGTGACCGCTGCCGCTCCAACACAACCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SGTESWPDWGKSFSF*DFFSDRCRSNTTSE Trigger: CTCTGAGGTTGTGTTGGAGCGGCAGCGGTCACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 90 bp | ACAATGCCTTCGATAAAGCCAGTGCTGTGGGAGCGGTGTTCGCTGTaGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTTGGAACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TMPSIKPVLWERCSL*LRFFRMPLGLLELS Trigger: GCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACAGCGAACACCGCTCCCACAGCACTGGCTTTATCGAAGGCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 90 bp | TGGGTCTTTTTCAAGATGCCTTTCTTGGGCATCGTGGCAGACTGTTaGAGGCTGAGCTTCCCTGACATATCTGCCTCGGGGGAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: WVFFKMPFLGIVADC*RLSFPDISASGELG Trigger: CCCCAGCTCCCCCGAGGCAGATATGTCAGGGAAGCTCAGCCTCAAACAGTCTGCCACGATGCCCAAGAAAGGCATCTTGAAAAAGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | AAGTCGTTCTCTTTCTTGGACTTCTTCAGTGACCGCTaGCGCTCCAACACAACCTCAGAGGCCCCGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: KSFSFLDFFSDR*RSNTTSEAPGL Trigger: CAAACCCGGGGCCTCTGAGGTTGTGTTGGAGCGGCAGCGGTCACTGAAGAAGTCCAAGAAAGAGAACGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | CCACATCGTTGCTGTCCAGCAGTTCCGAGGACTCGCTaGGCTCTGGGGATGAATAGTAGCCAGATTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PHRCCPAVPRTR*ALGMNSSQILS Trigger: AGAGAGAATCTGGCTACTATTCATCCCCAGAGCGCAGCGAGTCCTCGGAACTGCTGGACAGCAACGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | TTCTCCAGCTTCAAGTCCCGGTGGACCACACCATTCTaGAACGAGGAAACGGAAGAACTGAGCAGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: FSSFKSRWTTPF*NEETEELSRSR Trigger: CCTGCTCCTGCTCAGTTCTTCCGTTTCCTCGTTGCAGAATGGTGTGGTCCACCGGGACTTGAAGCTGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129355.2 |
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| CDS CAA 72 bp | GAGTCCTGGCCAGACTGGGGAAAGTCGTTCTCTTTCTaGGACTTCTTCAGTGACCGCTGCCGCTCCAACACA | + |
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Preference number: 6 (lower is better) Translates to: ESWPDWGKSFSF*DFFSDRCRSNT Trigger: TGTGTTGGAGCGGCAGCGGTCACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 72 bp | CTGTTGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTaGGAACTCAGCTTGGATGGGCTTTCAGGTACGGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLRFFRMPLGL*ELSLDGLSGTE Trigger: CTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS TCA 72 bp | GTCCAGCAGTTCCGAGGACTCGCTGCGCTCTGGGGATaGATAGTAGCCAGATTCTCTCTGCTGGGTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VQQFRGLAALWG*IVARFSLLGLF Trigger: AAAAAGACCCAGCAGAGAGAATCTGGCTACTATTCATCCCCAGAGCGCAGCGAGTCCTCGGAACTGCTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | GGAACGGTGATGCCAATCGATGATCCGTGCCAAGAGTaGAGACTCAGAGTCAGGAAGGGCATCACAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: GTVMPIDDPCQE*RLRVRKGITVT Trigger: TGTGACTGTGATGCCCTTCCTGACTCTGAGTCTCCACTCTTGGCACGGATCATCGATTGGCATCACCGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | GAACTCAGCTTGGATGGGCTTTCAGGTACGGAGTCCTaGCCAGACTGGGGAAAGTCGTTCTCTTTCTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: ELSLDGLSGTES*PDWGKSFSFLD Trigger: GTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | TGTTGCTCCGTTTCTTCAGGATGCCCTTGGGCCTCTTaGAACTCAGCTTGGATGGGCTTTCAGGTACGGAGT | + |
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Preference number: 6 (lower is better) Translates to: CCSVSSGCPWAS*NSAWMGFQVRS Trigger: ACTCCGTACCTGAAAGCCCATCCAAGCTGAGTTCCAAGAGGCCCAAGGGCATCCTGAAGAAACGGAGCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 72 bp | TTCAAGATGCCTTTCTTGGGCATCGTGGCAGACTGTTaGAGGCTGAGCTTCCCTGACATATCTGCCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: FKMPFLGIVADC*RLSFPDISASG Trigger: CCCCGAGGCAGATATGTCAGGGAAGCTCAGCCTCAAACAGTCTGCCACGATGCCCAAGAAAGGCATCTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS GCA 72 bp | TGCCACCATCTGAGTACCTGCTACTATGTTTTAAGATaGCCTTCCTCCGGCAGGACAGGCTGTGGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CHHLSTCYYVLR*PSSGRTGCGKF Trigger: GAACTTCCCACAGCCTGTCCTGCCGGAGGAAGGGCATCTTAAAACATAGTAGCAGGTACTCAGATGGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CCA 72 bp | TTGGATGGGCTTTCAGGTACGGAGTCCTGGCCAGACTaGGGAAAGTCGTTCTCTTTCTTGGACTTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LDGLSGTESWPD*GKSFSFLDFFS Trigger: ACTGAAGAAGTCCAAGAAAGAGAACGACTTTCCCCAGTCTGGCCAGGACTCCGTACCTGAAAGCCCATCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS CAA 72 bp | GATTCTCTCTGCTGGGTCTTTTTCAAGATGCCTTTCTaGGGCATCGTGGCAGACTGTTTGAGGCTGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DSLCWVFFKMPF*GIVADCLRLSF Trigger: GAAGCTCAGCCTCAAACAGTCTGCCACGATGCCCAAGAAAGGCATCTTGAAAAAGACCCAGCAGAGAGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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| CDS TCA 72 bp | CTTTCTTATACACCTGAGTCACATCGTCCATATCAGTaGGAAGGGAGAAGCTACTGTCTGCCAGCCGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSYTPESHRPYQ*EGRSYCLPAAS Trigger: TGAAGCGGCTGGCAGACAGTAGCTTCTCCCTTCTCACTGATATGGACGATGTGACTCAGGTGTATAAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020220.15 |
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