Pregenerated sensors for NTSR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027568Ensembl transcript IDs: ENSMUST00000029084.9, ENSMUST00000170448.2
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTaGTTTTCCAGGCGCCTAGAACCTGGGCCAGGGTGGCTGCTTGGC | + |
Preference number: 1 (lower is better) Translates to: WACLVWRQLPEMKGA*FSRRLEPGPGWLLG Trigger: GCCAAGCAGCCACCCTGGCCCAGGTTCTAGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGACAGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | CCCCTTACCTGTGGAGTCTCAGACACTGGCATCTTGCTGAGGACCTaGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCTGAAGCCAGCTGC | + |
Preference number: 1 (lower is better) Translates to: PLTCGVSDTGILLRT*LSAPSQKSQPEASC Trigger: GCAGCTGGCTTCAGGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTGTCTGAGACTCCACAGGTAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | TATGCCTCAGTCCAGGGCTGCTGGCCAGCTAGATGCTGGGGTGCTTaGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCATCTTGCTG | + |
Preference number: 1 (lower is better) Translates to: YASVQGCWPARCWGA*PPLTCGVSDTGILL Trigger: CAGCAAGATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAGCTGGCCAGCAGCCCTGGACTGAGGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 90 bp | CTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCATCTTGCTaGGGACCTGGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCTGAAG | + |
Preference number: 1 (lower is better) Translates to: LGLPLPVESQTLASC*GPGSVPLLRSPSLK Trigger: CTTCAGGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | GTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTaGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCA | + |
Preference number: 1 (lower is better) Translates to: VHGILGLSPSAQPAC*LEAEWACLVWRQLP Trigger: TGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | TGGCGGCTGGTTAACAAATTGACATATGCCTCAGTCCAGGGCTGCTaGCCAGCTAGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGA | + |
Preference number: 1 (lower is better) Translates to: WRLVNKLTYASVQGC*PARCWGAWPPLTCG Trigger: TCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAGCTGGCCAGCAGCCCTGGACTGAGGCATATGTCAATTTGTTAACCAGCCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 90 bp | GGCAGGAGTAGAGGCATAAAGGGGCTGAGATGGAGCCTGTGTCTCTaGACCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCA | + |
Preference number: 1 (lower is better) Translates to: GRSRGIKGLRWSLCL*TQVQHQTLSRPASA Trigger: TGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATGCCTCTACTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | CATCCAGGTGTGGCATGGATTCCCACAGCTTCCAGCTGTGGGCCCTaGACCTTACACAGTAATTTTGGGGCTTCTCTGGACCACTCTGGG | + |
Preference number: 1 (lower is better) Translates to: HPGVAWIPTASSCGP*TLHSNFGASLDHSG Trigger: CCCAGAGTGGTCCAGAGAAGCCCCAAAATTACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGCCACACCTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | GGAATTGGGGTCTCTTTAGTGGGCCATAGCCATCCAGGTGTGGCATaGATTCCCACAGCTTCCAGCTGTGGGCCCTGGACCTTACACAGT | + |
Preference number: 1 (lower is better) Translates to: GIGVSLVGHSHPGVA*IPTASSCGPWTLHS Trigger: ACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGCCACACCTGGATGGCTATGGCCCACTAAAGAGACCCCAATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | CACTTGACTCTCCTGCTACTTCTACCTTGTTGGTGCATGGCATCCTaGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTG | + |
Preference number: 1 (lower is better) Translates to: HLTLLLLLPCWCMAS*DCLQVPSQLVGWRL Trigger: CAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | CAGCCTGCCAAGAAAGGGTCTGGACATAAGGCTCAGAGAGTGCTATaGTATCTGCTGGACCAGGGCAGGAGTAGAGGCATAAAGGGGCTG | + |
Preference number: 1 (lower is better) Translates to: QPAKKGSGHKAQRVL*YLLDQGRSRGIKGL Trigger: CAGCCCCTTTATGCCTCTACTCCTGCCCTGGTCCAGCAGATACCATAGCACTCTCTGAGCCTTATGTCCAGACCCTTTCTTGGCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 90 bp | GAGGTGAAGGTCCCCGTGCAAAGCCACTTGAAGCTTGTCCTGTGTTaGTTCCAGGCCAGCCCTTTTATCCTTCCTGGGCATGTGGGAATT | + |
Preference number: 1 (lower is better) Translates to: EVKVPVQSHLKLVLC*FQASPFILPGHVGI Trigger: AATTCCCACATGCCCAGGAAGGATAAAAGGGCTGGCCTGGAATCAACACAGGACAAGCTTCAAGTGGCTTTGCACGGGGACCTTCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 90 bp | TTGTTTTATAGTTCAGAGGGAGCAGAGGCTAGCCTGGGCTGTGACTaGGCCTCCCATGTCCCGTGGCAATTTCATCCTTACAGAGCAGCT | + |
Preference number: 1 (lower is better) Translates to: LFYSSEGAEASLGCD*ASHVPWQFHPYRAA Trigger: AGCTGCTCTGTAAGGATGAAATTGCCACGGGACATGGGAGGCTCAGTCACAGCCCAGGCTAGCCTCTGCTCCCTCTGAACTATAAAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR GCA 90 bp | ACCTGGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCTGAAGCCAGCTaGTGTCAGACCTTAGTCTATACATCTGTATATGAGACGCAGAAC | + |
Preference number: 1 (lower is better) Translates to: TWLSAPSQKSQPEAS*CQTLVYTSVYETQN Trigger: GTTCTGCGTCTCATATACAGATGTATAGACTAAGGTCTGACAGCAGCTGGCTTCAGGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | TCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCTGTTATaGTTACAACAGCTCATCTGTCCAGGCCCAATGTGGTGCTTTCAT | + |
Preference number: 1 (lower is better) Translates to: SDTVSPCQCSSKVLL*LQQLICPGPMWCFH Trigger: ATGAAAGCACCACATTGGGCCTGGACAGATGAGCTGTTGTAACCATAACAGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR GCA 90 bp | TCTCTGAACCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTaGAGTTCCAAGGTGCTGTTATGGTTACAACAGCTCATCTGTCCA | + |
Preference number: 1 (lower is better) Translates to: SLNPSPTSDTVSPCQ*SSKVLLWLQQLICP Trigger: TGGACAGATGAGCTGTTGTAACCATAACAGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGGTTCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 90 bp | TTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTTGTTaGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTT | + |
Preference number: 1 (lower is better) Translates to: FCKRLHLTLLLLLPC*CMASWDCLQVPSQL Trigger: AAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 90 bp | GAGGAGGGTGTTCTTTTATTGAAGTGTGGAGGGTGGGTGGCATTCTaGCAGATATTTGGGGCACACGACTTGTTTCCACATCACGACTGG | + |
Preference number: 1 (lower is better) Translates to: EEGVLLLKCGGWVAF*QIFGAHDLFPHHDW Trigger: CCAGTCGTGATGTGGAAACAAGTCGTGTGCCCCAAATATCTGTCAGAATGCCACCCACCCTCCACACTTCAATAAAAGAACACCCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR CCA 90 bp | AGCATAGGATACCCAGCCAGGGTCACAGGTGTGTCTGGTGGTGCATaGATGTATGTCCCTAATTACACCAAGCACACAGACAAGATGCTA | + |
Preference number: 1 (lower is better) Translates to: SIGYPARVTGVSGGA*MYVPNYTKHTDKML Trigger: TAGCATCTTGTCTGTGTGCTTGGTGTAATTAGGGACATACATCCATGCACCACCAGACACACCTGTGACCCTGGCTGGGTATCCTATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR CCA 90 bp | TCCAGGGCTGCTGGCCAGCTAGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGCCCAGCAAAGCCACCTaGACTGGGGAGGCTGGACCC | + |
Preference number: 2 (lower is better) Translates to: SRAAGQLDAGVLGLPLPVPSKAT*TGEAGP Trigger: GGGTCCAGCCTCCCCAGTCCAGGTGGCTTTGCTGGG...CACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAGCTGGCCAGCAGCCCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 90 bp | GGTGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCATCTaGCTGAGGACCTGGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCT | + |
Preference number: 2 (lower is better) Translates to: GAWPPLTCGVSDTGI*LRTWLSAPSQKSQP Trigger: AGGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR GCA 90 bp | CTTGTTGGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCCTCAGTCCAGGGCTaGTGGCCAGCTAGATGCTGG | + |
Preference number: 2 (lower is better) Translates to: LVGAWHPGTVSKCPASLLASVQG*WPARCW Trigger: CCAGCATCTAGCTGGCCAGCAGCCCTGGACTGAGGC...CAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR CCA 90 bp | GGGGCTTCCCTCTTGGGTGATCACATCTTCCTGGTGTCAGCCTTGATCCGGACTGCCCAGCCAGCTTGTTaGCTGGAGGCTGAATGGGCC | + |
Preference number: 2 (lower is better) Translates to: GASLLGDHIFLVSALIRTAQPAC*LEAEWA Trigger: GGCCCATTCAGCCTCCAGCCAACAAGCTGGCTGGGC...AGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGGAAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR CAA 90 bp | GGAGGGGCTTCCCTCTTGGGTGATCACATCTTCCTGGTGTCAGCCTaGATCCGGACTCACCCAGGTCCTGCCCTTGATGGCCTGAGGAAT | + |
Preference number: 2 (lower is better) Translates to: GGASLLGDHIFLVSA*IRTHPGPALDGLRN Trigger: ATTCCTCAGGCCATCAAGGGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGGAAGCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR CCA 90 bp | TGTCCCACTTCTGTGTACTCCAGGCTGAGTCCTTCAAGACAGTCCCGGTCCGCCCACAGCTTCCAGCTGTaGGCCCTGGACCTTACACAG | + |
Preference number: 2 (lower is better) Translates to: CPTSVYSRLSPSRQSRSAHSFQL*ALDLTQ Trigger: CTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTG...GGCGGACCGGGACTGTCTTGAAGGACTCAGCCTGGAGTACACAGAAGTGGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR CCA 90 bp | CATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTATCTTGCTGAGGACCTaGCTCAGTGCCCCTTCTCAG | + |
Preference number: 2 (lower is better) Translates to: HGILGLSPSAQPACWLEAILLRT*LSAPSQ Trigger: CTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGAT...AGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR TCA 90 bp | CTGGTGTCAGCCTTGATCCGGACTCACCCAGGTCCTGCCCTTGATGGCCTGAGGTGGGGTTCAAGTACTTaGACACCCTCCCCATTTCTC | + |
Preference number: 2 (lower is better) Translates to: LVSALIRTHPGPALDGLRWGSST*TPSPFL Trigger: GAGAAATGGGGAGGGTGTTCAAGTACTTGAACCCCA...CCTCAGGCCATCAAGGGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR GCA 90 bp | TCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCTGTTATGGGGGGTTGGGGGAGTTaGTGCCCTGTGCACAGGCTA | + |
Preference number: 2 (lower is better) Translates to: SNIRHCLALPVQFQGAVMGGWGS*CPVHRL Trigger: TAGCCTGTGCACAGGGCAGCAACTCCCCCAACCCCC...CATAACAGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR CCA 90 bp | AGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCATCGCTCAGAGAGTGCTATaGTATCTGCTGGACCAGGGC | + |
Preference number: 2 (lower is better) Translates to: RCWGAWPPLTCGVSDTGIAQRVL*YLLDQG Trigger: GCCCTGGTCCAGCAGATACCATAGCACTCTCTGAGC...GATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR CCA 90 bp | GTGTCAGCCTTGATCCGGACTCACCCAGGTCCTGCCCTTGATGGCCTGAGGAATCATCCAGGTGTGGCATaGATTCCCACAGCTTCCAGC | + |
Preference number: 2 (lower is better) Translates to: VSALIRTHPGPALDGLRNHPGVA*IPTASS Trigger: GCTGGAAGCTGTGGGAATCCATGCCACACCTGGATG...ATTCCTCAGGCCATCAAGGGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR CCA 90 bp | GTGTCAGCCTTGATCCGGACTCACCCAGGTCCTGCCCTTGATGGCCTGAGGAATATCTTGCTGAGGACCTaGCTCAGTGCCCCTTCTCAG | + |
Preference number: 2 (lower is better) Translates to: VSALIRTHPGPALDGLRNILLRT*LSAPSQ Trigger: CTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGAT...ATTCCTCAGGCCATCAAGGGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR CAA 90 bp | GAGGGGCTCCCATGCAGACATTTCTTAGGAGGAGGGGCTTCCCTCTaGGGTGATCACATCTTCCTGGTGTCAGCCTTGATCCGGACTCAC | + |
Preference number: 2 (lower is better) Translates to: EGLPCRHFLGGGASL*GDHIFLVSALIRTH Trigger: GTGAGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGGAAGCCCCTCCTCCTAAGAAATGTCTGCATGGGAGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR TCA 90 bp | ATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTGAAGCTTGTCCTGTGTTaGTTCCAGGCCAGCCCTTTT | + |
Preference number: 2 (lower is better) Translates to: MASWDCLQVPSQLVGWRLKLVLC*FQASPF Trigger: AAAAGGGCTGGCCTGGAATCAACACAGGACAAGCTT...CAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR TCA 90 bp | CCTCCCATGTCCCGTGGCAATTTCATCCTTACAGAGCAGCTGCATGTCCAGCCATCAGAAGTCCCAGCCTaGAGCCAGCTGCTGTCAGAC | + |
Preference number: 2 (lower is better) Translates to: PPMSRGNFILTEQLHVQPSEVPA*SQLLSD Trigger: GTCTGACAGCAGCTGGCTTCAGGCTGGGACTTCTGA...TGGCTGGACATGCAGCTGCTCTGTAAGGATGAAATTGCCACGGGACATGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR GCA 90 bp | CATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTCAGCCTGAAGCCAGCTaGTGTCAGACCTTAGTCTAT | + |
Preference number: 2 (lower is better) Translates to: HGILGLSPSAQPACWLEAQPEAS*CQTLVY Trigger: ATAGACTAAGGTCTGACAGCAGCTGGCTTCAGGCTG...AGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR CCA 90 bp | CATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTCCCTTTTATCCTTCCTaGGCATGTGGGAATTGGGGT | + |
Preference number: 2 (lower is better) Translates to: HGILGLSPSAQPACWLEAPFYPS*ACGNWG Trigger: ACCCCAATTCCCACATGCCCAGGAAGGATAAAAGGG...AGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR GCA 90 bp | GACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATCCAAGAGGTGGCAGTGTACCAGCCTaGCAAGAAAGGGTCTGGACA | + |
Preference number: 2 (lower is better) Translates to: DWGGWTPLIFHPSADPRGGSVPA*QERVWT Trigger: TGTCCAGACCCTTTCTTGGCAGGCTGGTACACTGCC...ACCTCTTGGATCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR CCA 90 bp | GGGGCTTCCCTCTTGGGTGATCACATCTTCCTGGTGTCAGCCTTGATCCGGACTTGCTATGGTATCTGCTaGACCAGGGCAGGAGTAGAG | + |
Preference number: 2 (lower is better) Translates to: GASLLGDHIFLVSALIRTCYGIC*TRAGVE Trigger: CTCTACTCCTGCCCTGGTCCAGCAGATACCATAGCA...AGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGGAAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR CCA 90 bp | TCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTTTCTCTGGACCACTCTaGGAAGGGCAGTGTACCAGC | + |
Preference number: 2 (lower is better) Translates to: SCLETAPRDEGCLLFQAPFSGPL*EGQCTS Trigger: GCTGGTACACTGCCCTTCCCAGAGTGGTCCAGAGAA...AGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR CCA 90 bp | TGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCTTCTCTGGACCACTCTaGGAAGGGCAGTGTACCAGC | + |
Preference number: 2 (lower is better) Translates to: WACLVWRQLPEMKGACFSFSGPL*EGQCTS Trigger: GCTGGTACACTGCCCTTCCCAGAGTGGTCCAGAGAA...GGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGACAGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR TCA 90 bp | GGTGATCACATCTTCCTGGTGTCAGCCTTGATCCGGACTCACCCAGGTCCTGCCGGAGACCGTCCTTGGTaGGTGCTAATTTCTTCTTGT | + |
Preference number: 2 (lower is better) Translates to: GDHIFLVSALIRTHPGPAGDRPW*VLISSC Trigger: ACAAGAAGAAATTAGCACTCACCAAGGACGGTCTCC...GGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR GCA 90 bp | CTGTCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGGAGTGCTATGGTATCTaGTGGACCAGGGCAGGAGTA | + |
Preference number: 2 (lower is better) Translates to: LSCLETAPRDEGCLLFQAECYGI*WTRAGV Trigger: TACTCCTGCCCTGGTCCAGCAGATACCATAGCACTC...CGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 90 bp | AGCCAGGATGCTCAGGACAGCCTCCAGAACTATTTTCATCTTCACTaGGCCCAGAGCATAGGATACCCAGCCAGGGTCACAGGTGTGTCT | + |
Preference number: 2 (lower is better) Translates to: SQDAQDSLQNYFHLH*AQSIGYPARVTGVS Trigger: AGACACACCTGTGACCCTGGCTGGGTATCCTATGCTCTGGGCCAAGTGAAGATGAAAATAGTTCTGGAGGCTGTCCTGAGCATCCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR-3UTR TCA 90 bp | CTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTAAAGCTTGTCCTGTGTTaGTTCCAGGCCAGCCCTTTT | + |
Preference number: 2 (lower is better) Translates to: LVWRQLPEMKGACFSRRLKLVLC*FQASPF Trigger: AAAAGGGCTGGCCTGGAATCAACACAGGACAAGCTT...TAGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR CCA 90 bp | TGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTGAATGGGCCTTCCAAGGTGCTGTTATaGTTACAACAGCTCATCTGT | + |
Preference number: 2 (lower is better) Translates to: WDCLQVPSQLVGWRLNGPSKVLL*LQQLIC Trigger: ACAGATGAGCTGTTGTAACCATAACAGCACCTTGGA...AGGCCCATTCAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 90 bp | CTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTTGTaGGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCT | + |
Preference number: 2 (lower is better) Translates to: LLQKATLDSPATSTL*VHGILGLSPSAQPA Trigger: AGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR-3UTR GCA 90 bp | CTTGTTGGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGAGTGCAGTTCCAAGGTaGTGTTATGGTTACAACAGC | + |
Preference number: 2 (lower is better) Translates to: LVGAWHPGTVSKCPASLLSAVPR*CYGYNS Trigger: GCTGTTGTAACCATAACAGCACCTTGGAACTGCACT...CAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR-3UTR GCA 90 bp | TCTGAGGAATCATGTAAGAGGGCATTGGCTCTACCCAGCCTCAGGTGTCCCACTCTTCTACCTTGTTGGTaGATGGCATCCTGGGACTGT | + |
Preference number: 2 (lower is better) Translates to: SEESCKRALALPSLRCPTLLPCW*MASWDC Trigger: ACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAG...AGTGGGACACCTGAGGCTGGGTAGAGCCAATGCCCTCTTACATGATTCCTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR-3UTR GCA 90 bp | CTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGAAGTGCAGTTCCAAGGTaGTGTTATGGTTACAACAGC | + |
Preference number: 2 (lower is better) Translates to: LVGWRLNGPVLFGDSSQRSAVPR*CYGYNS Trigger: GCTGTTGTAACCATAACAGCACCTTGGAACTGCACT...TCTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR-3UTR TCA 90 bp | AGAGCTAAGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTTGTTGGCTGGAGGCTaGATGGGCCTGTCTTGTTTG | + |
Preference number: 2 (lower is better) Translates to: RAKALLQKATLDSPATSTLLAGG*MGLSCL Trigger: CAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAA...GGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCTTAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CAA 90 bp | GTCTGGGAACAAAGGAGACCGTCCTTGGTGAGTGCTAATTTCTTCTaGTTAAAGGCCTTTTGTAGGGCCAGGAGAGAAACCGCCTCTTTT | + |
Preference number: 2 (lower is better) Translates to: VWEQRRPSLVSANFF*LKAFCRARRETASF Trigger: AAAAGAGGCGGTTTCTCTCCTGGCCCTACAAAAGGCCTTTAACAAGAAGAAATTAGCACTCACCAAGGACGGTCTCCTTTGTTCCCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR-3UTR TCA 90 bp | AGAGCTAAGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCCCGTGCAAAGCCACTTaGAGCTTGTCCTGTGTTGAT | + |
Preference number: 2 (lower is better) Translates to: RAKALLQKATLDSPATSTPCKAT*SLSCVD Trigger: ATCAACACAGGACAAGCTTCAAGTGGCTTTGCACGG...GGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCTTAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR-3UTR TCA 90 bp | TGTATGTCCCTAATTACACCAAGCACACAGACAAGATGCTATAGACTACAGCAGTTGTTGGCTGGAGGCTaGATGGGCCTGTCTTGTTTG | + |
Preference number: 2 (lower is better) Translates to: CMSLITPSTQTRCYRLQQLLAGG*MGLSCL Trigger: CAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAA...CTGCTGTAGTCTATAGCATCTTGTCTGTGTGCTTGGTGTAATTAGGGACATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR CAA 90 bp | TTGCTTCTAAAACATCCATTAGTCTGGGAACAAAGGAGACCGTCCTaGGTGAGTGCTAATTTCTTCTTGTTAAAGGCCTTTTGTAGGGCC | + |
Preference number: 2 (lower is better) Translates to: LLLKHPLVWEQRRPS*VSANFFLLKAFCRA Trigger: GGCCCTACAAAAGGCCTTTAACAAGAAGAAATTAGCACTCACCAAGGACGGTCTCCTTTGTTCCCAGACTAATGGATGTTTTAGAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR TCA 72 bp | CCCTCTTGGGTGATCACATCTTCCTGGTGTCAGCCTTaGTCCGGACTCACCCAGGTCCTGCCCTTGATGGCC | + |
Preference number: 3 (lower is better) Translates to: PSWVITSSWCQP*SGLTQVLPLMA Trigger: GGCCATCAAGGGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR GCA 72 bp | CTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTaGTTTTCCAGGCGCCTAGAACCTGGGCCAGGGTGG | + |
Preference number: 3 (lower is better) Translates to: LVWRQLPEMKGA*FSRRLEPGPGW Trigger: CCACCCTGGCCCAGGTTCTAGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | GTCTCTTTAGTGGGCCATAGCCATCCAGGTGTGGCATaGATTCCCACAGCTTCCAGCTGTGGGCCCTGGACC | + |
Preference number: 3 (lower is better) Translates to: VSLVGHSHPGVA*IPTASSCGPWT Trigger: GGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGCCACACCTGGATGGCTATGGCCCACTAAAGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | TGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTaGCATCTTGCTGAGGACCTGGCTCAGTGCCCCTTC | + |
Preference number: 3 (lower is better) Translates to: CLASPYLWSLRH*HLAEDLAQCPF Trigger: GAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR-3UTR CAA 90 bp | ACCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCGGCCACTACTTAACCTaGGGAGGCTTTGGGGTGGGG | + |
Preference number: 3 (lower is better) Translates to: TQVQHQTLSRPASAVPRCGHYLT*GGFGVG Trigger: CCCCACCCCAAAGCCTCCCAAGGTTAAGTAGTGGCC...GCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR TCA 72 bp | CCCTTACCTGTGGAGTCTCAGACACTGGCATCTTGCTaGGGACCTGGCTCAGTGCCCCTTCTCAGAAGTCCC | + |
Preference number: 3 (lower is better) Translates to: PLPVESQTLASC*GPGSVPLLRSP Trigger: GGGACTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTGTCTGAGACTCCACAGGTAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR TCA 72 bp | GTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTaGATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGA | + |
Preference number: 3 (lower is better) Translates to: VSKCPASLLAGG*MGLSCLETAPR Trigger: TCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | GGCCCTGGACCTTACACAGTAATTTTGGGGCTTCTCTaGACCACTCTGGGAAGGGCAGTGTACCAGCCTGCC | + |
Preference number: 3 (lower is better) Translates to: GPGPYTVILGLL*TTLGRAVYQPA Trigger: GGCAGGCTGGTACACTGCCCTTCCCAGAGTGGTCCAGAGAAGCCCCAAAATTACTGTGTAAGGTCCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | TGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTaGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGC | + |
Preference number: 3 (lower is better) Translates to: WDCLQVPSQLVG*RLNGPVLFGDS Trigger: GCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR GCA 72 bp | CTGGTTAACAAATTGACATATGCCTCAGTCCAGGGCTaGTGGCCAGCTAGATGCTGGGGTGCTTGGCCTCCC | + |
Preference number: 3 (lower is better) Translates to: LVNKLTYASVQG*WPARCWGAWPP Trigger: GGGAGGCCAAGCACCCCAGCATCTAGCTGGCCAGCAGCCCTGGACTGAGGCATATGTCAATTTGTTAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | TGTGGAGTCTCAGACACTGGCATCTTGCTGAGGACCTaGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCTGAA | + |
Preference number: 3 (lower is better) Translates to: CGVSDTGILLRT*LSAPSQKSQPE Trigger: TTCAGGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTGTCTGAGACTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | CTCCTGCTACTTCTACCTTGTTGGTGCATGGCATCCTaGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGC | + |
Preference number: 3 (lower is better) Translates to: LLLLLPCWCMAS*DCLQVPSQLVG Trigger: GCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAGTAGCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR-3UTR CAA 90 bp | TGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTAGAACCTGAAGCTTGTCCTGTGTaGATTCCAGGCCAGCCCTTT | + |
Preference number: 3 (lower is better) Translates to: WRQLPEMKGACFSRRLEPEACPV*IPGQPF Trigger: AAAGGGCTGGCCTGGAATCAACACAGGACAAGCTTC...AGGTTCTAGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR TCA 72 bp | GACCTGGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCTaGAGCCAGCTGCTGTCAGACCTTAGTCTATACATC | + |
Preference number: 3 (lower is better) Translates to: DLAQCPFSEVPA*SQLLSDLSLYI Trigger: GATGTATAGACTAAGGTCTGACAGCAGCTGGCTTCAGGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | GTGGCATGGATTCCCACAGCTTCCAGCTGTGGGCCCTaGACCTTACACAGTAATTTTGGGGCTTCTCTGGAC | + |
Preference number: 3 (lower is better) Translates to: VAWIPTASSCGP*TLHSNFGASLD Trigger: GTCCAGAGAAGCCCCAAAATTACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | GTTAACAAATTGACATATGCCTCAGTCCAGGGCTGCTaGCCAGCTAGATGCTGGGGTGCTTGGCCTCCCCTT | + |
Preference number: 3 (lower is better) Translates to: VNKLTYASVQGC*PARCWGAWPPL Trigger: AAGGGGAGGCCAAGCACCCCAGCATCTAGCTGGCCAGCAGCCCTGGACTGAGGCATATGTCAATTTGTTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | GCTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTaGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTT | + |
Preference number: 3 (lower is better) Translates to: ACWLEAEWACLV*RQLPEMKGACF Trigger: AAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR TCA 72 bp | AGAGGCATAAAGGGGCTGAGATGGAGCCTGTGTCTCTaGACCCAAGTCCAACATCAGACACTGTCTCGCCCT | + |
Preference number: 3 (lower is better) Translates to: RGIKGLRWSLCL*TQVQHQTLSRP Trigger: AGGGCGAGACAGTGTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 72 bp | GTCCCCGTGCAAAGCCACTTGAAGCTTGTCCTGTGTTaGTTCCAGGCCAGCCCTTTTATCCTTCCTGGGCAT | + |
Preference number: 3 (lower is better) Translates to: VPVQSHLKLVLC*FQASPFILPGH Trigger: ATGCCCAGGAAGGATAAAAGGGCTGGCCTGGAATCAACACAGGACAAGCTTCAAGTGGCTTTGCACGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 72 bp | CAGACATTTCTTAGGAGGAGGGGCTTCCCTCTTGGGTaGTCACATCTTCCTGGTGTCAGCCTTGATCCGGAC | + |
Preference number: 3 (lower is better) Translates to: QTFLRRRGFPLG*SHLPGVSLDPD Trigger: GTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGGAAGCCCCTCCTCCTAAGAAATGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR GCA 72 bp | CCATGTCCCGTGGCAATTTCATCCTTACAGAGCAGCTaGATGTCCAGCCATCTCTCTCCCAGACAACAGAGC | + |
Preference number: 3 (lower is better) Translates to: PCPVAISSLQSS*MSSHLSPRQQS Trigger: GCTCTGTTGTCTGGGAGAGAGATGGCTGGACATGCAGCTGCTCTGTAAGGATGAAATTGCCACGGGACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | CCTGTGTTGATTCCAGGCCAGCCCTTTTATCCTTCCTaGGCATGTGGGAATTGGGGTCTCTTTAGTGGGCCA | + |
Preference number: 3 (lower is better) Translates to: PVLIPGQPFYPS*ACGNWGLFSGP Trigger: TGGCCCACTAAAGAGACCCCAATTCCCACATGCCCAGGAAGGATAAAAGGGCTGGCCTGGAATCAACACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR GCA 72 bp | CCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTaGAGTTCCAAGGTGCTGTTATGGTTACAACAGCTC | + |
Preference number: 3 (lower is better) Translates to: PSPTSDTVSPCQ*SSKVLLWLQQL Trigger: GAGCTGTTGTAACCATAACAGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR CCA 72 bp | TACCCAGCCAGGGTCACAGGTGTGTCTGGTGGTGCATaGATGTATGTCCCTAATTACACCAAGCACACAGAC | + |
Preference number: 3 (lower is better) Translates to: YPARVTGVSGGA*MYVPNYTKHTD Trigger: GTCTGTGTGCTTGGTGTAATTAGGGACATACATCCATGCACCACCAGACACACCTGTGACCCTGGCTGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR GCA 72 bp | CTGAACCCAAGTCCAACATCAGACACTGTCTCGCCCTaGCAGTGCAGTTCCAAGGTGCTGTTATGGTTACAA | + |
Preference number: 3 (lower is better) Translates to: LNPSPTSDTVSP*QCSSKVLLWLQ Trigger: TTGTAACCATAACAGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CCA 72 bp | AAGAAAGGGTCTGGACATAAGGCTCAGAGAGTGCTATaGTATCTGCTGGACCAGGGCAGGAGTAGAGGCATA | + |
Preference number: 3 (lower is better) Translates to: KKGSGHKAQRVL*YLLDQGRSRGI Trigger: TATGCCTCTACTCCTGCCCTGGTCCAGCAGATACCATAGCACTCTCTGAGCCTTATGTCCAGACCCTTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR-3UTR CAA 90 bp | AGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCATCAGTGCTAATTTCTTCTaGTTAAAGGCCTTTTGTAGG | + |
Preference number: 3 (lower is better) Translates to: RCWGAWPPLTCGVSDTGISANFF*LKAFCR Trigger: CCTACAAAAGGCCTTTAACAAGAAGAAATTAGCACT...GATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR TCA 72 bp | CAGCTGCTGTCAGACCTTAGTCTATACATCTGTATATaGGACGCAGAACCATGCATGTCCCCAGCAAAGCCA | + |
Preference number: 3 (lower is better) Translates to: QLLSDLSLYICI*DAEPCMSPAKP Trigger: TGGCTTTGCTGGGGACATGCATGGTTCTGCGTCTCATATACAGATGTATAGACTAAGGTCTGACAGCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
3UTR TCA 72 bp | GTTCTTTTATTGAAGTGTGGAGGGTGGGTGGCATTCTaGCAGATATTTGGGGCACACGACTTGTTTCCACAT | + |
Preference number: 3 (lower is better) Translates to: VLLLKCGGWVAF*QIFGAHDLFPH Trigger: ATGTGGAAACAAGTCGTGTGCCCCAAATATCTGTCAGAATGCCACCCACCCTCCACACTTCAATAAAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
||
3UTR GCA 72 bp | TGTATGTCCCTAATTACACCAAGCACACAGACAAGATaGTATAGACTACAGCAGAGACTTCTGGTGACTGCC | + |
Preference number: 3 (lower is better) Translates to: CMSLITPSTQTR*YRLQQRLLVTA Trigger: GGCAGTCACCAGAAGTCTCTGCTGTAGTCTATAGCATCTTGTCTGTGTGCTTGGTGTAATTAGGGACATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR GCA 72 bp | TGGTTACAACAGCTCATCTGTCCAGGCCCAATGTGGTaGTTTCATTTCTTGCTTCTAAAACATCCATTAGTC | + |
Preference number: 3 (lower is better) Translates to: WLQQLICPGPMW*FHFLLLKHPLV Trigger: GACTAATGGATGTTTTAGAAGCAAGAAATGAAAGCACCACATTGGGCCTGGACAGATGAGCTGTTGTAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR TCA 72 bp | TCTTTATTGAGACATATGAGGAGGGTGTTCTTTTATTaGAGTGTGGAGGGTGGGTGGCATTCTGACAGATAT | + |
Preference number: 3 (lower is better) Translates to: SLLRHMRRVFFY*SVEGGWHSDRY Trigger: ATATCTGTCAGAATGCCACCCACCCTCCACACTTCAATAAAAGAACACCCTCCTCATATGTCTCAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR CCA 90 bp | TCCAGGGCTGCTGGCCAGCTAGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGTGGACAGGAAGACCTaGCGGAAGTTGGCGGAGACG | + |
Preference number: 4 (lower is better) Translates to: SRAAGQLDAGVLGLPLPVVDRKT*RKLAET Trigger: CGTCTCCGCCAACTTCCGCCAGGTCTTCCTGTCCAC...CACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAGCTGGCCAGCAGCCCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
CDS-3UTR GCA 90 bp | AGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCATCGCTGGCCATCGGCACTaGGGTTCTGCAGGCCCATGG | + |
Preference number: 4 (lower is better) Translates to: RCWGAWPPLTCGVSDTGIAGHRH*GSAGPW Trigger: CCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGC...GATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CCAGCAAAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCCCCTGCTCGGCAGCCTaGTGCACCATGACGGTCAGT | + |
Preference number: 4 (lower is better) Translates to: PAKPPGLGRLDPTYLPSFPCSAA*CTMTVS Trigger: ACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGG...GAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTTTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | TGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTAGAACCTTGTCCACCGTGGGTGTaGACACCAGGCCACCAGGGT | + |
Preference number: 4 (lower is better) Translates to: WRQLPEMKGACFSRRLEPCPPWV*TPGHQG Trigger: ACCCTGGTGGCCTGGTGTGCACACCCACGGTGGACA...AGGTTCTAGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
CDS-3UTR CCA 90 bp | TGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTAGAACCTCCCGGGTGGCGCTGGTaGAAAACGCATGGTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: WRQLPEMKGACFSRRLEPPGWRW*KTHGCW Trigger: CCAGCAACCATGCGTTTTCCACCAGCGCCACCCGGG...AGGTTCTAGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
CDS-3UTR TCA 90 bp | CCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATCCAAGTGGCCAGCAGCAGGATaGGCAGGTCAGACAGTGCCA | + |
Preference number: 4 (lower is better) Translates to: PGLGRLDPTYLPSFCRSKWPAAG*AGQTVP Trigger: TGGCACTGTCTGACCTGCTCATCCTGCTGCTGGCCA...CTTGGATCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
CDS-3UTR TCA 90 bp | GGTGTGGCATGGATTCCCACAGCTTCCAGCTGTGGGCCCTGGACCTTACACAGTTCAGGCTGGCTACATTaGGGGCTGTGGCATAGGTGC | + |
Preference number: 4 (lower is better) Translates to: GVAWIPTASSCGPWTLHSSGWLH*GLWHRC Trigger: GCACCTATGCCACAGCCCTCAATGTAGCCAGCCTGA...ACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGCCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTCCGAGTTGCCCACAGTaGCCACCACAAAAAGTGCCA | + |
Preference number: 4 (lower is better) Translates to: HGILGLSPSAQPACWLEAPSCPQ*PPQKVP Trigger: TGGCACTTTTTGTGGTGGGCACTGTGGGCAACTCGG...AGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CTAGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCAAGGCTGTCACCGAGTTaGCCACAGTGCCCACCACAA | + |
Preference number: 4 (lower is better) Translates to: LDAGVLGLPLPVESQTLARLSPS*PQCPPQ Trigger: TTGTGGTGGGCACTGTGGGCAACTCGGTGACAGCCT...TGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CCAGCAAAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTCGGCACTGCGGTTCTaGAGGCCCATGGTGAAAAGC | + |
Preference number: 4 (lower is better) Translates to: PAKPPGLGRLDPTYLPSFSALRF*RPMVKS Trigger: GCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGA...GAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTTTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
CDS-3UTR CCA 90 bp | CACTGGCATCTTGCTGAGGACCTGGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCCCAAAGGCCCAGGGATaGTGCACCCAGATGAAGTTG | + |
Preference number: 4 (lower is better) Translates to: HWHLAEDLAQCPFSEVPAPKAQG*CTQMKL Trigger: CAACTTCATCTGGGTGCACCATCCCTGGGCCTTTGG...GGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CTAGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGGCACTTCCTGGAGAACGTTaGCCTCTTCTTTCGGCGGCG | + |
Preference number: 4 (lower is better) Translates to: LDAGVLGLPLPVESQTLALPGER*PLLSAA Trigger: CGCCGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAG...TGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | CCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATCCAAGTCAGGCTGGCTACATTaGGGGCTGTGGCATAGGTGC | + |
Preference number: 4 (lower is better) Translates to: PGLGRLDPTYLPSFCRSKSGWLH*GLWHRC Trigger: GCACCTATGCCACAGCCCTCAATGTAGCCAGCCTGA...CTTGGATCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | CCAGCAAAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTCTGCAGGCCCATGGTaGAAAGCATGGGTACAGCCA | + |
Preference number: 4 (lower is better) Translates to: PAKPPGLGRLDPTYLPSFSAGPW*KAWVQP Trigger: TGGCTGTACCCATGCTTTTCACCATGGGCCTGCAGA...GAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTTTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | CATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTGATGGGATTGATGGCTaGGCTGACGTAGAAGAGAGC | + |
Preference number: 4 (lower is better) Translates to: HGILGLSPSAQPACWLEADGIDG*ADVEES Trigger: GCTCTCTTCTACGTCAGCTCAGCCATCAATCCCATC...AGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | GCTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGGAGCAGGTCAGACAGTaGCAGGCTACCCAGGTGGTA | + |
Preference number: 4 (lower is better) Translates to: ACWLEAEWACLVWRQLPEEQVRQ*QATQVV Trigger: TACCACCTGGGTAGCCTGGCACTGTCTGACCTGCTC...CTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | GTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCTGTTATTGTCCACCGTGGGTGTaGACACCAGGCCACCAGGGT | + |
Preference number: 4 (lower is better) Translates to: VQHQTLSRPASAVPRCCYCPPWV*TPGHQG Trigger: ACCCTGGTGGCCTGGTGTGCACACCCACGGTGGACA...ATAACAGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
||
CDS-3UTR GCA 90 bp | CCTGGGCATGTGGGAATTGGGGTCTCTTTAGTGGGCCATAGCCATCCAGGTGTGTGCTCGGCAGCCTGGTaGACCATGACGGTCAGTTTG | + |
Preference number: 4 (lower is better) Translates to: PGHVGIGVSLVGHSHPGVCSAAW*TMTVSL Trigger: CAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCA...CACACCTGGATGGCTATGGCCCACTAAAGAGACCCCAATTCCCACATGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACTGTGGGTGCCCACGGTaGACACACCACGGCCCTGCT | + |
Preference number: 4 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDCGCPR*THHGPA Trigger: AGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCACA...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | TCTGAGGAATCATGTAAGAGGGCATTGGCTCTACCCAGCCTCAGGTGTCCCACTCCCTGCTCGGCAGCCTaGTGCACCATGACGGTCAGT | + |
Preference number: 4 (lower is better) Translates to: SEESCKRALALPSLRCPTPCSAA*CTMTVS Trigger: ACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGG...AGTGGGACACCTGAGGCTGGGTAGAGCCAATGCCCTCTTACATGATTCCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR CCA 90 bp | GCTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGAGAGGCAAGCCAGTGTaGACAGGAAGACCTGGCGGA | + |
Preference number: 4 (lower is better) Translates to: ACWLEAEWACLVWRQLPERGKPV*TGRPGG Trigger: TCCGCCAGGTCTTCCTGTCCACACTGGCTTGCCTCT...CTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | CCTCCCCTTACCTGTGGAGTCTCAGACACTGGCATCTaGCTGAGGACCTGGCTCAGTGCCCCTTCTCAGAAG | + |
Preference number: 4 (lower is better) Translates to: PPLTCGVSDTGI*LRTWLSAPSQK Trigger: CTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTGTCTGAGACTCCACAGGTAAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | TCCCTCTTGGGTGATCACATCTTCCTGGTGTCAGCCTaGATCCGGACTCACCCAGGTCCTGCCCTTGATGGC | + |
Preference number: 4 (lower is better) Translates to: SLLGDHIFLVSA*IRTHPGPALDG Trigger: GCCATCAAGGGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR TCA 90 bp | AAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGAAGATATAGCAGAACATaGGGCGCCGCACGTGGTAGG | + |
Preference number: 4 (lower is better) Translates to: KPPGLGRLDPTYLPSFCRRYSRT*GAARGR Trigger: CCTACCACGTGCGGCGCCTCATGTTCTGCTATATCT...TCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | GCTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGTGTTCACGTCCAGGTTaGTGTTGGGCTCCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: ACWLEAEWACLVWRQLPECSRPG*CWAPGW Trigger: CCATCCTGGAGCCCAACAGCAACCTGGACGTGAACA...CTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CCTCCCATGTCCCGTGGCAATTTCATCCTTACAGAGCAGCTGCATGTCCAGCCAAGGCTGTCACCGAGTTaGCCACAGTGCCCACCACAA | + |
Preference number: 4 (lower is better) Translates to: PPMSRGNFILTEQLHVQPRLSPS*PQCPPQ Trigger: TTGTGGTGGGCACTGTGGGCAACTCGGTGACAGCCT...TGGCTGGACATGCAGCTGCTCTGTAAGGATGAAATTGCCACGGGACATGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CTGTCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGGGTGGTAATGCACAGTaGTCTGCAGGCTCTGCAGCG | + |
Preference number: 4 (lower is better) Translates to: LSCLETAPRDEGCLLFQAGGNAQ*SAGSAA Trigger: CGCTGCAGAGCCTGCAGAGCACTGTGCATTACCACC...CGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | GATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACACTGTCTCGCCCTGTCGGCACTGCGGTTCTaGAGGCCCATGGTGAAAAGC | + |
Preference number: 4 (lower is better) Translates to: DGACVSEPKSNIRHCLALSALRF*RPMVKS Trigger: GCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGA...CAGGGCGAGACAGTGTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | TCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTTGCTCGGCAGCCTGGTaGACCATGACGGTCAGTTTG | + |
Preference number: 4 (lower is better) Translates to: SCLETAPRDEGCLLFQAPCSAAW*TMTVSL Trigger: CAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCA...AGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | TCTGAGGAATCATGTAAGAGGGCATTGGCTCTACCCAGCCTCAGGTGTCCCACTGTGGACAGGAAGACCTaGCGGAAGTTGGCGGAGACG | + |
Preference number: 4 (lower is better) Translates to: SEESCKRALALPSLRCPTVDRKT*RKLAET Trigger: CGTCTCCGCCAACTTCCGCCAGGTCTTCCTGTCCAC...AGTGGGACACCTGAGGCTGGGTAGAGCCAATGCCCTCTTACATGATTCCTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR CCA 90 bp | TCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTAGAGGCAAGCCAGTGTaGACAGGAAGACCTGGCGGA | + |
Preference number: 4 (lower is better) Translates to: SCLETAPRDEGCLLFQAPRGKPV*TGRPGG Trigger: TCCGCCAGGTCTTCCTGTCCACACTGGCTTGCCTCT...AGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | TCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGCCTAGATATAGCAGAACATaGGGCGCCGCACGTGGTAGG | + |
Preference number: 4 (lower is better) Translates to: SCLETAPRDEGCLLFQAPRYSRT*GAARGR Trigger: CCTACCACGTGCGGCGCCTCATGTTCTGCTATATCT...AGGCGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | CCTGGGCATGTGGGAATTGGGGTCTCTTTAGTGGGCCATAGCCATCCAGGTGTGGATGGGATTGATGGCTaGGCTGACGTAGAAGAGAGC | + |
Preference number: 4 (lower is better) Translates to: PGHVGIGVSLVGHSHPGVDGIDG*ADVEES Trigger: GCTCTCTTCTACGTCAGCTCAGCCATCAATCCCATC...CACACCTGGATGGCTATGGCCCACTAAAGAGACCCCAATTCCCACATGCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CAGCTTCCAGCTGTGGGCCCTGGACCTTACACAGTAATTTTGGGGCTTCTCTGGTGTTCACGTCCAGGTTaGTGTTGGGCTCCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: QLPAVGPGPYTVILGLLWCSRPG*CWAPGW Trigger: CCATCCTGGAGCCCAACAGCAACCTGGACGTGAACA...CCAGAGAAGCCCCAAAATTACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACGTGCTCTGCAGGCTCTaGAGCGACTTCTTCCGCGCT | + |
Preference number: 4 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDVLCRL*SDFFRA Trigger: AGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGAGCAC...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CCTGGGCATGTGGGAATTGGGGTCTCTTTAGTGGGCCATAGCCATCCAGGTGTGAAGGCCCAGGGATGGTaGACCCAGATGAAGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: PGHVGIGVSLVGHSHPGVKAQGW*TQMKLY Trigger: GTACAACTTCATCTGGGTGCACCATCCCTGGGCCTT...CACACCTGGATGGCTATGGCCCACTAAAGAGACCCCAATTCCCACATGCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | ACCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCAAGGCCCAGGGATGGTaGACCCAGATGAAGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: TQVQHQTLSRPASAVPRCKAQGW*TQMKLY Trigger: GTACAACTTCATCTGGGTGCACCATCCCTGGGCCTT...GCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | GGTGATCACATCTTCCTGGTGTCAGCCTTGATCCGGACTCACCCAGGTCCTGCCCATGGTTGCTGGACATaGTGTTTGGCTTCCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: GDHIFLVSALIRTHPGPAHGCWT*CLASWR Trigger: TCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATG...GGCAGGACCTGGGTGAGTCCGGATCAAGGCTGACACCAGGAAGATGTGATCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR CCA 90 bp | AAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATGCTCTAAACTGTTGTaGGTGCCCACGGTGCACACA | + |
Preference number: 4 (lower is better) Translates to: KPPGLGRLDPTYLPSFCRCSKLL*VPTVHT Trigger: TGTGTGCACCGTGGGCACCCACAACAGTTTAGAGCA...TCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CTCCAGAACTATTTTCATCTTCACTTGGCCCAGAGCATAGGATACCCAGCCAGGCCCGGGTGGCGCTGGTaGAAAACGCATGGTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: LQNYFHLHLAQSIGYPARPGWRW*KTHGCW Trigger: CCAGCAACCATGCGTTTTCCACCAGCGCCACCCGGG...CCTGGCTGGGTATCCTATGCTCTGGGCCAAGTGAAGATGAAAATAGTTCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR TCA 90 bp | TGGACCCCACTTATCTTCCATCCTTCTGCAGATCCAAGAGGTGAAGGTCCCCGTTCTGCAGGCCCATGGTaGAAAGCATGGGTACAGCCA | + |
Preference number: 4 (lower is better) Translates to: WTPLIFHPSADPRGEGPRSAGPW*KAWVQP Trigger: TGGCTGTACCCATGCTTTTCACCATGGGCCTGCAGA...ACGGGGACCTTCACCTCTTGGATCTGCAGAAGGATGGAAGATAAGTGGGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CACTGGCATCTTGCTGAGGACCTGGCTCAGTGCCCCTTCTCAGAAGTCCCAGCCTGGATTCTGAGGAATTaGCAGAACCATTGCTCAAGC | + |
Preference number: 4 (lower is better) Translates to: HWHLAEDLAQCPFSEVPAWILRN*QNHCSS Trigger: GCTTGAGCAATGGTTCTGGCAATTCCTCAGAATCCA...GGCTGGGACTTCTGAGAAGGGGCACTGAGCCAGGTCCTCAGCAAGATGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | CATGGATTCCCACAGCTTCCAGCTGTGGGCCCTGGACCTTACACAGTAATTTTGGAGCAGGTCAGACAGTaGCAGGCTACCCAGGTGGTA | + |
Preference number: 4 (lower is better) Translates to: HGFPQLPAVGPGPYTVILEQVRQ*QATQVV Trigger: TACCACCTGGGTAGCCTGGCACTGTCTGACCTGCTC...CAAAATTACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | AGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTTGTTGGTGTGGGTGCCCACGGTaGACACACCACGGCCCTGCT | + |
Preference number: 4 (lower is better) Translates to: RLFCKRLHLTLLLLLPCWCGCPR*THHGPA Trigger: AGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCACA...CCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | GCTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGCATGGTTGCTGGACATaGTGTTTGGCTTCCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: ACWLEAEWACLVWRQLPEHGCWT*CLASWR Trigger: TCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATG...CTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | AAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATGTTGGGCTCCAGGATaGATTCTGAGGAATTGCCAG | + |
Preference number: 4 (lower is better) Translates to: KPPGLGRLDPTYLPSFCRCWAPG*ILRNCQ Trigger: CTGGCAATTCCTCAGAATCCATCCTGGAGCCCAACA...TCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACCTTCCTGGAGAACGTTaGCCTCTTCTTTCGGCGGCG | + |
Preference number: 4 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDLPGER*PLLSAA Trigger: CGCCGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAG...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | GGCCACCACATTTCTGAGGAATCATGTAAGAGGGCATaGGCTCTACCCAGCCTCAGGTGTCCCACTTCTGTG | + |
Preference number: 4 (lower is better) Translates to: GHHISEESCKRA*ALPSLRCPTSV Trigger: CACAGAAGTGGGACACCTGAGGCTGGGTAGAGCCAATGCCCTCTTACATGATTCCTCAGAAATGTGGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR TCA 90 bp | AAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGACTCCAGGATGGATTCTaGGGAATTGCCAGAACCATT | + |
Preference number: 4 (lower is better) Translates to: KPPGLGRLDPTYLPSFCRLQDGF*GIARTI Trigger: AATGGTTCTGGCAATTCCTCAGAATCCATCCTGGAG...TCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | TTGAACACCCTCCCCATTTCTCTGGGTGACCACAGATACCCTGACTTTTCACCCGATGGTGCACCCAGATaGAGTTGTACAGCTCCACGG | + |
Preference number: 4 (lower is better) Translates to: LNTLPISLGDHRYPDFSPDGAPR*SCTAPR Trigger: CCGTGGAGCTGTACAACTTCATCTGGGTGCACCATC...GGGTGAAAAGTCAGGGTATCTGTGGTCACCCAGAGAAATGGGGAGGGTGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR TCA 90 bp | GGTGTGGCATGGATTCCCACAGCTTCCAGCTGTGGGCCCTGGACCTTACACAGTTGTTTAGGATGGAGATaGTCAGCATGGGAAACAGGA | + |
Preference number: 4 (lower is better) Translates to: GVAWIPTASSCGPWTLHSCLGWR*SAWETG Trigger: TCCTGTTTCCCATGCTGATCATCTCCATCCTAAACA...ACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGCCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | TGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTGAATGGGCCTAGTCCACTGTTCATCTaGGATATAGCAGAACATGAG | + |
Preference number: 4 (lower is better) Translates to: WDCLQVPSQLVGWRLNGPSPLFI*DIAEHE Trigger: CTCATGTTCTGCTATATCTCAGATGAACAGTGGACT...AGGCCCATTCAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | TGGACCCCACTTATCTTCCATCCTTCTGCAGATCCAAGAGGTGAAGGTCCCCGTAGACCTGGCGGAAGTTaGCGGAGACGAGGTTGTAAA | + |
Preference number: 4 (lower is better) Translates to: WTPLIFHPSADPRGEGPRRPGGS*RRRGCK Trigger: TTTACAACCTCGTCTCCGCCAACTTCCGCCAGGTCT...ACGGGGACCTTCACCTCTTGGATCTGCAGAAGGATGGAAGATAAGTGGGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CTTGTTGGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGAAAACGCATGGTTGCTaGACATGCTGTTTGGCTTCC | + |
Preference number: 4 (lower is better) Translates to: LVGAWHPGTVSKCPASLLKTHGC*TCCLAS Trigger: GGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTT...CAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCTAAAACGCATGGTTGCTaGACATGCTGTTTGGCTTCC | + |
Preference number: 4 (lower is better) Translates to: PKSNIRHCLALPVQFQGAKTHGC*TCCLAS Trigger: GGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTT...AGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | CCATGCAGACATTTCTTAGGAGGAGGGGCTTCCCTCTaGGGTGATCACATCTTCCTGGTGTCAGCCTTGATC | + |
Preference number: 4 (lower is better) Translates to: PCRHFLGGGASL*GDHIFLVSALI Trigger: GATCAAGGCTGACACCAGGAAGATGTGATCACCCAAGAGGGAAGCCCCTCCTCCTAAGAAATGTCTGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR CAA 72 bp | GCTCAGGACAGCCTCCAGAACTATTTTCATCTTCACTaGGCCCAGAGCATAGGATACCCAGCCAGGGTCACA | + |
Preference number: 4 (lower is better) Translates to: AQDSLQNYFHLH*AQSIGYPARVT Trigger: TGTGACCCTGGCTGGGTATCCTATGCTCTGGGCCAAGTGAAGATGAAAATAGTTCTGGAGGCTGTCCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR TCA 90 bp | AAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATGTTTAGGATGGAGATaGTCAGCATGGGAAACAGGA | + |
Preference number: 4 (lower is better) Translates to: KPPGLGRLDPTYLPSFCRCLGWR*SAWETG Trigger: TCCTGTTTCCCATGCTGATCATCTCCATCCTAAACA...TCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | AGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTTGTTGGGTGCTCTGCAGGCTCTaGAGCGACTTCTTCCGCGCT | + |
Preference number: 4 (lower is better) Translates to: RLFCKRLHLTLLLLLPCWVLCRL*SDFFRA Trigger: AGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGAGCAC...CCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR GCA 90 bp | TCTATACATCTGTATATGAGACGCAGAACCATGCATGTCCCCAGCAAAGCCACCGGTGGTAATGCACAGTaGTCTGCAGGCTCTGCAGCG | + |
Preference number: 4 (lower is better) Translates to: SIHLYMRRRTMHVPSKATGGNAQ*SAGSAA Trigger: CGCTGCAGAGCCTGCAGAGCACTGTGCATTACCACC...GGTGGCTTTGCTGGGGACATGCATGGTTCTGCGTCTCATATACAGATGTATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CTGTCTTGTTTGGAGACAGCTCCCAGAGATGAAGGGTGCCTGCTTTTCCAGGCGATGAAGGTGTTAACCTaGATGACGACCTTGACGGTG | + |
Preference number: 4 (lower is better) Translates to: LSCLETAPRDEGCLLFQAMKVLT*MTTLTV Trigger: CACCGTCAAGGTCGTCATCCAGGTTAACACCTTCAT...CGCCTGGAAAAGCAGGCACCCTTCATCTCTGGGAGCTGTCTCCAAACAAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACTGCTCTAAACTGTTGTaGGTGCCCACGGTGCACACA | + |
Preference number: 4 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDCSKLL*VPTVHT Trigger: TGTGTGCACCGTGGGCACCCACAACAGTTTAGAGCA...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | TCTGAGGAATCATGTAAGAGGGCATTGGCTCTACCCAGCCTCAGGTGTCCCACTCTCCAGGATGGATTCTaGGGAATTGCCAGAACCATT | + |
Preference number: 4 (lower is better) Translates to: SEESCKRALALPSLRCPTLQDGF*GIARTI Trigger: AATGGTTCTGGCAATTCCTCAGAATCCATCCTGGAG...AGTGGGACACCTGAGGCTGGGTAGAGCCAATGCCCTCTTACATGATTCCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR GCA 90 bp | TACTTCTACCTTGTTGGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCTGGATTCTGAGGAATTaGCAGAACCATTGCTCAAGC | + |
Preference number: 4 (lower is better) Translates to: YFYLVGAWHPGTVSKCPAWILRN*QNHCSS Trigger: GCTTGAGCAATGGTTCTGGCAATTCCTCAGAATCCA...GGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACTGTTGGGCTCCAGGATaGATTCTGAGGAATTGCCAG | + |
Preference number: 4 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDCWAPG*ILRNCQ Trigger: CTGGCAATTCCTCAGAATCCATCCTGGAGCCCAACA...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | TCTATACATCTGTATATGAGACGCAGAACCATGCATGTCCCCAGCAAAGCCACCCCAAAGGCCCAGGGATaGTGCACCCAGATGAAGTTG | + |
Preference number: 4 (lower is better) Translates to: SIHLYMRRRTMHVPSKATPKAQG*CTQMKL Trigger: CAACTTCATCTGGGTGCACCATCCCTGGGCCTTTGG...GGTGGCTTTGCTGGGGACATGCATGGTTCTGCGTCTCATATACAGATGTATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | AGAGCTAAGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCGATGGTGCACCCAGATaGAGTTGTACAGCTCCACGG | + |
Preference number: 4 (lower is better) Translates to: RAKALLQKATLDSPATSTDGAPR*SCTAPR Trigger: CCGTGGAGCTGTACAACTTCATCTGGGTGCACCATC...GGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCTTAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | CTTGTTGGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGCGTAGAAGAGAGCGTTaGTCAGCATATAGAAATAGT | + |
Preference number: 4 (lower is better) Translates to: LVGAWHPGTVSKCPASLLRRRER*SAYRNS Trigger: ACTATTTCTATATGCTGACCAACGCTCTCTTCTACG...CAACAAGCTGGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | CAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTaGTTGGTGCATGGCATCCTGGGACTGTCTCCAAGT | + |
Preference number: 4 (lower is better) Translates to: QKATLDSPATST*LVHGILGLSPS Trigger: ACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CCA 90 bp | AGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTTGTTGGAGACCTGGCGGAAGTTaGCGGAGACGAGGTTGTAAA | + |
Preference number: 4 (lower is better) Translates to: RLFCKRLHLTLLLLLPCWRPGGS*RRRGCK Trigger: TTTACAACCTCGTCTCCGCCAACTTCCGCCAGGTCT...CCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | GCCATCTCTCTCCCAGACAACAGAGCTAAGGCTCTTTaGCAAAAGGCTACACTTGACTCTCCTGCTACTTCT | + |
Preference number: 4 (lower is better) Translates to: AISLPDNRAKAL*QKATLDSPATS Trigger: AGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCTTAGCTCTGTTGTCTGGGAGAGAGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR TCA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACAGTCCACTGTTCATCTaGGATATAGCAGAACATGAG | + |
Preference number: 4 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDSPLFI*DIAEHE Trigger: CTCATGTTCTGCTATATCTCAGATGAACAGTGGACT...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | CAAAGGAGACCGTCCTTGGTGAGTGCTAATTTCTTCTaGTTAAAGGCCTTTTGTAGGGCCAGGAGAGAAACC | + |
Preference number: 4 (lower is better) Translates to: QRRPSLVSANFF*LKAFCRARRET Trigger: GGTTTCTCTCCTGGCCCTACAAAAGGCCTTTAACAAGAAGAAATTAGCACTCACCAAGGACGGTCTCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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3UTR CAA 72 bp | ACAACAGAGCTAAGGCTCTTTTGCAAAAGGCTACACTaGACTCTCCTGCTACTTCTACCTTGTTGGTGCATG | + |
Preference number: 4 (lower is better) Translates to: TTELRLFCKRLH*TLLLLLPCWCM Trigger: CATGCACCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCTTAGCTCTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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3UTR CAA 72 bp | AAACATCCATTAGTCTGGGAACAAAGGAGACCGTCCTaGGTGAGTGCTAATTTCTTCTTGTTAAAGGCCTTT | + |
Preference number: 4 (lower is better) Translates to: KHPLVWEQRRPS*VSANFFLLKAF Trigger: AAAGGCCTTTAACAAGAAGAAATTAGCACTCACCAAGGACGGTCTCCTTTGTTCCCAGACTAATGGATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR CCA 90 bp | TGTATGTCCCTAATTACACCAAGCACACAGACAAGATGCTATAGACTACAGCAGCGTAGAAGAGAGCGTTaGTCAGCATATAGAAATAGT | + |
Preference number: 4 (lower is better) Translates to: CMSLITPSTQTRCYRLQQRRRER*SAYRNS Trigger: ACTATTTCTATATGCTGACCAACGCTCTCTTCTACG...CTGCTGTAGTCTATAGCATCTTGTCTGTGTGCTTGGTGTAATTAGGGACATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS GCA 90 bp | GTGCACACCAGGCCACCAGGGTGCTGGCCATCGGCACTGCGGTTCTaGAGGCCCATGGTGAAAAGCATGGGTACAGCCAGCAGCGCCGAG | + |
Preference number: 5 (lower is better) Translates to: VHTRPPGCWPSALRF*RPMVKSMGTASSAE Trigger: CTCGGCGCTGCTGGCTGTACCCATGCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGCACCCTGGTGGCCTGGTGTGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 90 bp | ACGGTGGCTGTGTCCACCGTGGGTGTGCACACCAGGCCACCAGGGTaGTGGCCATCGGCACTGCGGTTCTGCAGGCCCATGGTGAAAAGC | + |
Preference number: 5 (lower is better) Translates to: TVAVSTVGVHTRPPG*WPSALRFCRPMVKS Trigger: GCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGCACCCTGGTGGCCTGGTGTGCACACCCACGGTGGACACAGCCACCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | CAAGCTGAGCGCCAGGAGCATCGTCTCCAGTCCGAACTGTGGATGTaGGAAGGGCTGGGCACCGGGTTCACTTGGGGCTCCCTGCTGCAC | + |
Preference number: 5 (lower is better) Translates to: QAERQEHRLQSELWM*EGLGTGFTWGSLLH Trigger: GTGCAGCAGGGAGCCCCAAGTGAACCCGGTGCCCAGCCCTTCCCACATCCACAGTTCGGACTGGAGACGATGCTCCTGGCGCTCAGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | GTGGCTGTGTCCACCGTGGGTGTGCACACCAGGCCACCAGGGTGCTaGCCATCGGCACTGCGGTTCTGCAGGCCCATGGTGAAAAGCATG | + |
Preference number: 5 (lower is better) Translates to: VAVSTVGVHTRPPGC*PSALRFCRPMVKSM Trigger: CATGCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGCACCCTGGTGGCCTGGTGTGCACACCCACGGTGGACACAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 90 bp | CACCAGGGTGCTGGCCATCGGCACTGCGGTTCTGCAGGCCCATGGTaGAAAGCATGGGTACAGCCAGCAGCGCCGAGGCTAGCCATATGG | + |
Preference number: 5 (lower is better) Translates to: HQGAGHRHCGSAGPW*KAWVQPAAPRLAIW Trigger: CCATATGGCTAGCCTCGGCGCTGCTGGCTGTACCCATGCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGCACCCTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | CCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCTGGGCACCGGGTTCACTaGGGGCTCCCTGCTGCACGG | + |
Preference number: 5 (lower is better) Translates to: PKSNIRHCLALPVQFQGAGHRVH*GLPAAR Trigger: CCGTGCAGCAGGGAGCCCCAAGTGAACCCGGTGCCC...AGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 90 bp | CAGCTCCACGGGCATGGCCAGCAGCAGGATGAGCAGGTCAGACAGTaGCAGGCTACCCAGGTGGTAATGCACAGTGCTCTGCAGGCTCTG | + |
Preference number: 5 (lower is better) Translates to: QLHGHGQQQDEQVRQ*QATQVVMHSALQAL Trigger: CAGAGCCTGCAGAGCACTGTGCATTACCACCTGGGTAGCCTGGCACTGTCTGACCTGCTCATCCTGCTGCTGGCCATGCCCGTGGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 90 bp | AGGGCCTGGACACGGCCTGGCTCGATGGACATGTTGAACGTGCTGTaGTCTAAACTGTTGTGGGTGCCCACGGTGCACACACCACGGCCC | + |
Preference number: 5 (lower is better) Translates to: RAWTRPGSMDMLNVL*SKLLWVPTVHTPRP Trigger: GGGCCGTGGTGTGTGCACCGTGGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCATCGAGCCAGGCCGTGTCCAGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | CCTGGCTCGATGGACATGTTGAACGTGCTGTGCTCTAAACTGTTGTaGGTGCCCACGGTGCACACACCACGGCCCTGCTCGGCAGCCTGG | + |
Preference number: 5 (lower is better) Translates to: PGSMDMLNVLCSKLL*VPTVHTPRPCSAAW Trigger: CCAGGCTGCCGAGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCATCGAGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | CCGGGTGGCGCTGGTGGAAAACGCATGGTTGCTGGACATGCTGTTTaGCTTCCTGGAGAACGTTGGCCTCTTCTTTCGGCGGCGGCGCCA | + |
Preference number: 5 (lower is better) Translates to: PGGAGGKRMVAGHAV*LPGERWPLLSAAAP Trigger: TGGCGCCGCCGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCGCCACCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | GACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATCCAAGAGGTGGGCACCGGGTTCACTaGGGGCTCCCTGCTGCACGG | + |
Preference number: 5 (lower is better) Translates to: DWGGWTPLIFHPSADPRGGHRVH*GLPAAR Trigger: CCGTGCAGCAGGGAGCCCCAAGTGAACCCGGTGCCC...ACCTCTTGGATCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 90 bp | CTCCATGGCGCAGGGCCTGGACACGGCCTGGCTCGATGGACATGTTaGACGTGCTGTGCTCTAAACTGTTGTGGGTGCCCACGGTGCACA | + |
Preference number: 5 (lower is better) Translates to: LHGAGPGHGLARWTC*TCCALNCCGCPRCT Trigger: TGTGCACCGTGGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCATCGAGCCAGGCCGTGTCCAGGCCCTGCGCCATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | CGCTGGTGGAAAACGCATGGTTGCTGGACATGCTGTTTGGCTTCCTaGAGAACGTTGGCCTCTTCTTTCGGCGGCGGCGCCACCCAGGAC | + |
Preference number: 5 (lower is better) Translates to: RWWKTHGCWTCCLAS*RTLASSFGGGATQD Trigger: GTCCTGGGTGGCGCCGCCGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | TGGGACTGTCTCCAAGTGCCCAGCCAGCTTGTTGGCTGGAGGCTGAATGGGCCTCGGGACATGAGGGTCTaGGCCTTGAAGGGATGGCAG | + |
Preference number: 5 (lower is better) Translates to: WDCLQVPSQLVGWRLNGPRDMRV*ALKGWQ Trigger: CTGCCATCCCTTCAAGGCCAAGACCCTCATGTCCCG...AGGCCCATTCAGCCTCCAGCCAACAAGCTGGCTGGGCACTTGGAGACAGTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 90 bp | TGGGTGCCCACGGTGCACACACCACGGCCCTGCTCGGCAGCCTGGTaGACCATGACGGTCAGTTTGTTGGCTATCACAGTGTTTAGGATG | + |
Preference number: 5 (lower is better) Translates to: WVPTVHTPRPCSAAW*TMTVSLLAITVFRM Trigger: CATCCTAAACACTGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 90 bp | TGCTCTAAACTGTTGTGGGTGCCCACGGTGCACACACCACGGCCCTaGTCGGCAGCCTGGTGCACCATGACGGTCAGTTTGTTGGCTATC | + |
Preference number: 5 (lower is better) Translates to: CSKLLWVPTVHTPRP*SAAWCTMTVSLLAI Trigger: GATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCACAACAGTTTAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 90 bp | GGGTTTCCCGGGTGGCGCTGGTGGAAAACGCATGGTTGCTGGACATaGTGTTTGGCTTCCTGGAGAACGTTGGCCTCTTCTTTCGGCGGC | + |
Preference number: 5 (lower is better) Translates to: GFPGWRWWKTHGCWT*CLASWRTLASSFGG Trigger: GCCGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCGCCACCCGGGAAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | TTGTGGGTGCCCACGGTGCACACACCACGGCCCTGCTCGGCAGCCTaGTGCACCATGACGGTCAGTTTGTTGGCTATCACAGTGTTTAGG | + |
Preference number: 5 (lower is better) Translates to: LWVPTVHTPRPCSAA*CTMTVSLLAITVFR Trigger: CCTAAACACTGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | GCGATTACCACAGCACGTAAGACGAGGACTCCATGGCGCAGGGCCTaGACACGGCCTGGCTCGATGGACATGTTGAACGTGCTGTGCTCT | + |
Preference number: 5 (lower is better) Translates to: AITTARKTRTPWRRA*TRPGSMDMLNVLCS Trigger: AGAGCACAGCACGTTCAACATGTCCATCGAGCCAGGCCGTGTCCAGGCCCTGCGCCATGGAGTCCTCGTCTTACGTGCTGTGGTAATCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | CAGCTAGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGGAGTCTCAGACACTGAAGGCTGTCACCGAGTaGCCCACAGTGCCCACCACA | + |
Preference number: 5 (lower is better) Translates to: QLDAGVLGLPLPVESQTLKAVTE*PTVPTT Trigger: TGTGGTGGGCACTGTGGGCAACTCGGTGACAGCCTT...CAGTGTCTGAGACTCCACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | TCCAGGGCTGCTGGCCAGCTAGATGCTGGGGTGCTTGGCCTCCCCTTACCTGTGTGCTGGACATGCTGTTaGGCTTCCTGGAGAACGTTG | + |
Preference number: 5 (lower is better) Translates to: SRAAGQLDAGVLGLPLPVCWTCC*ASWRTL Trigger: CAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCA...CACAGGTAAGGGGAGGCCAAGCACCCCAGCATCTAGCTGGCCAGCAGCCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 90 bp | GCACAGTGCTCTGCAGGCTCTGCAGCGACTTCTTCCGCGCTAGAGTaGAGGCTGTCACCGAGTTGCCCACAGTGCCCACCACAAAAAGTG | + |
Preference number: 5 (lower is better) Translates to: AQCSAGSAATSSALE*RLSPSCPQCPPQKV Trigger: CACTTTTTGTGGTGGGCACTGTGGGCAACTCGGTGACAGCCTTCACTCTAGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGAGCACTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | ACCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCAAGGCTGTCACCGAGTaGCCCACAGTGCCCACCACA | + |
Preference number: 5 (lower is better) Translates to: TQVQHQTLSRPASAVPRCKAVTE*PTVPTT Trigger: TGTGGTGGGCACTGTGGGCAACTCGGTGACAGCCTT...GCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | GCTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGCGGGACATGAGGGTCTaGGCCTTGAAGGGATGGCAG | + |
Preference number: 5 (lower is better) Translates to: ACWLEAEWACLVWRQLPERDMRV*ALKGWQ Trigger: CTGCCATCCCTTCAAGGCCAAGACCCTCATGTCCCG...CTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | GCTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGATGAGGGTCTTGGCCTaGAAGGGATGGCAGATGGCC | + |
Preference number: 5 (lower is better) Translates to: ACWLEAEWACLVWRQLPEMRVLA*KGWQMA Trigger: GGCCATCTGCCATCCCTTCAAGGCCAAGACCCTCAT...CTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | CCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGATCCAAGACGTCCAGGTTGCTGTaGGGCTCCAGGATGGATTCT | + |
Preference number: 5 (lower is better) Translates to: PGLGRLDPTYLPSFCRSKTSRLL*GSRMDS Trigger: AGAATCCATCCTGGAGCCCAACAGCAACCTGGACGT...CTTGGATCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | AGTACAGGGTTTCCCGGGTGGCGCTGGTGGAAAACGCATGGTTGCTaGACATGCTGTTTGGCTTCCTGGAGAACGTTGGCCTCTTCTTTC | + |
Preference number: 5 (lower is better) Translates to: STGFPGWRWWKTHGC*TCCLASWRTLASSF Trigger: GAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCGCCACCCGGGAAACCCTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 90 bp | GTCAGTGTTCACGTCCAGGTTGCTGTTGGGCTCCAGGATGGATTCTaGGGAATTGCCAGAACCATTGCTCAAGCTGAGCGCCAGGAGCAT | + |
Preference number: 5 (lower is better) Translates to: VSVHVQVAVGLQDGF*GIARTIAQAERQEH Trigger: ATGCTCCTGGCGCTCAGCTTGAGCAATGGTTCTGGCAATTCCTCAGAATCCATCCTGGAGCCCAACAGCAACCTGGACGTGAACACTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | TTGAACACCCTCCCCATTTCTCTGGGTGACCACAGATACCCTGACTTTTCACCCCTGTGCTCTAAACTGTaGTGGGTGCCCACGGTGCAC | + |
Preference number: 5 (lower is better) Translates to: LNTLPISLGDHRYPDFSPLCSKL*WVPTVH Trigger: GTGCACCGTGGGCACCCACAACAGTTTAGAGCACAG...GGGTGAAAAGTCAGGGTATCTGTGGTCACCCAGAGAAATGGGGAGGGTGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029084.9 |
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CDS-3UTR CAA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACCTGTGCTCTAAACTGTaGTGGGTGCCCACGGTGCAC | + |
Preference number: 5 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDLCSKL*WVPTVH Trigger: GTGCACCGTGGGCACCCACAACAGTTTAGAGCACAG...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | CATAAAGGGGCTGAGATGGAGCCTGTGTCTCTGAACCCAAGTCCAACATCAGACTGCACCCAGATGAAGTaGTACAGCTCCACGGGCATG | + |
Preference number: 5 (lower is better) Translates to: HKGAEMEPVSLNPSPTSDCTQMK*YSSTGM Trigger: CATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCA...GTCTGATGTTGGACTTGGGTTCAGAGACACAGGCTCCATCTCAGCCCCTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | CTTGTTGGCTGGAGGCTGAATGGGCCTGTCTTGTTTGGAGACAGCTCCCAGAGAGGCTCGATGGACATGTaGAACGTGCTGTGCTCTAAA | + |
Preference number: 5 (lower is better) Translates to: LVGWRLNGPVLFGDSSQRGSMDM*NVLCSK Trigger: TTTAGAGCACAGCACGTTCAACATGTCCATCGAGCC...TCTCTGGGAGCTGTCTCCAAACAAGACAGGCCCATTCAGCCTCCAGCCAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | CCCAAGTCCAACATCAGACACTGTCTCGCCCTGCCAGTGCAGTTCCAAGGTGCTATGGATTCTGAGGAATaGCCAGAACCATTGCTCAAG | + |
Preference number: 5 (lower is better) Translates to: PKSNIRHCLALPVQFQGAMDSEE*PEPLLK Trigger: CTTGAGCAATGGTTCTGGCAATTCCTCAGAATCCAT...AGCACCTTGGAACTGCACTGGCAGGGCGAGACAGTGTCTGATGTTGGACTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | AAGCCACCTGGACTGGGGAGGCTGGACCCCACTTATCTTCCATCCTTCTGCAGAACCATGACGGTCAGTTaGTTGGCTATCACAGTGTTT | + |
Preference number: 5 (lower is better) Translates to: KPPGLGRLDPTYLPSFCRTMTVS*LAITVF Trigger: AAACACTGTGATAGCCAACAAACTGACCGTCATGGT...TCTGCAGAAGGATGGAAGATAAGTGGGGTCCAGCCTCCCCAGTCCAGGTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 90 bp | GAAATAGTGGTAGAAGTCGAAGAGGAACGTAGTCCACTGTTCATCTaGGATATAGCAGAACATGAGGCGCCGCACGTGGTAGGGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: EIVVEVEEERSPLFI*DIAEHEAPHVVGQP Trigger: TGGCTGCCCTACCACGTGCGGCGCCTCATGTTCTGCTATATCTCAGATGAACAGTGGACTACGTTCCTCTTCGACTTCTACCACTATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 90 bp | CGGTCACCAGCACCTTGGAATAAATGTCAGTGTTCACGTCCAGGTTaGTGTTGGGCTCCAGGATGGATTCTGAGGAATTGCCAGAACCAT | + |
Preference number: 5 (lower is better) Translates to: RSPAPWNKCQCSRPG*CWAPGWILRNCQNH Trigger: ATGGTTCTGGCAATTCCTCAGAATCCATCCTGGAGCCCAACAGCAACCTGGACGTGAACACTGACATTTATTCCAAGGTGCTGGTGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | TCTATACATCTGTATATGAGACGCAGAACCATGCATGTCCCCAGCAAAGCCACCTGCACCCAGATGAAGTaGTACAGCTCCACGGGCATG | + |
Preference number: 5 (lower is better) Translates to: SIHLYMRRRTMHVPSKATCTQMK*YSSTGM Trigger: CATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCA...GGTGGCTTTGCTGGGGACATGCATGGTTCTGCGTCTCATATACAGATGTATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | AGAGCTAAGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCATGAGGGTCTTGGCCTaGAAGGGATGGCAGATGGCC | + |
Preference number: 5 (lower is better) Translates to: RAKALLQKATLDSPATSTMRVLA*KGWQMA Trigger: GGCCATCTGCCATCCCTTCAAGGCCAAGACCCTCAT...GGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCTTAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | TACTTCTACCTTGTTGGTGCATGGCATCCTGGGACTGTCTCCAAGTGCCCAGCCACCATGACGGTCAGTTaGTTGGCTATCACAGTGTTT | + |
Preference number: 5 (lower is better) Translates to: YFYLVGAWHPGTVSKCPATMTVS*LAITVF Trigger: AAACACTGTGATAGCCAACAAACTGACCGTCATGGT...GGCTGGGCACTTGGAGACAGTCCCAGGATGCCATGCACCAACAAGGTAGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | GCATGGATTCCCACAGCTTCCAGCTGTGGGCCCTGGACCTTACACAGTAATTTTGGCTCGATGGACATGTaGAACGTGCTGTGCTCTAAA | + |
Preference number: 5 (lower is better) Translates to: AWIPTASSCGPWTLHSNFGSMDM*NVLCSK Trigger: TTTAGAGCACAGCACGTTCAACATGTCCATCGAGCC...AAAATTACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 90 bp | CCAGCACCTTGGAATAAATGTCAGTGTTCACGTCCAGGTTGCTGTTaGGCTCCAGGATGGATTCTGAGGAATTGCCAGAACCATTGCTCA | + |
Preference number: 5 (lower is better) Translates to: PAPWNKCQCSRPGCC*APGWILRNCQNHCS Trigger: TGAGCAATGGTTCTGGCAATTCCTCAGAATCCATCCTGGAGCCCAACAGCAACCTGGACGTGAACACTGACATTTATTCCAAGGTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | GCATGGATTCCCACAGCTTCCAGCTGTGGGCCCTGGACCTTACACAGTAATTTTATGGATTCTGAGGAATaGCCAGAACCATTGCTCAAG | + |
Preference number: 5 (lower is better) Translates to: AWIPTASSCGPWTLHSNFMDSEE*PEPLLK Trigger: CTTGAGCAATGGTTCTGGCAATTCCTCAGAATCCAT...AAAATTACTGTGTAAGGTCCAGGGCCCACAGCTGGAAGCTGTGGGAATCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS-3UTR CAA 90 bp | AGGCTCTTTTGCAAAAGGCTACACTTGACTCTCCTGCTACTTCTACCTTGTTGGTGCTGGACATGCTGTTaGGCTTCCTGGAGAACGTTG | + |
Preference number: 5 (lower is better) Translates to: RLFCKRLHLTLLLLLPCWCWTCC*ASWRTL Trigger: CAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCA...CCAACAAGGTAGAAGTAGCAGGAGAGTCAAGTGTAGCCTTTTGCAAAAGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 72 bp | GTGTCCACCGTGGGTGTGCACACCAGGCCACCAGGGTaGTGGCCATCGGCACTGCGGTTCTGCAGGCCCATG | + |
Preference number: 6 (lower is better) Translates to: VSTVGVHTRPPG*WPSALRFCRPM Trigger: CATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGCACCCTGGTGGCCTGGTGTGCACACCCACGGTGGACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | TCCACCGTGGGTGTGCACACCAGGCCACCAGGGTGCTaGCCATCGGCACTGCGGTTCTGCAGGCCCATGGTG | + |
Preference number: 6 (lower is better) Translates to: STVGVHTRPPGC*PSALRFCRPMV Trigger: CACCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGCACCCTGGTGGCCTGGTGTGCACACCCACGGTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | GCTGGCCATCGGCACTGCGGTTCTGCAGGCCCATGGTaGAAAGCATGGGTACAGCCAGCAGCGCCGAGGCTA | + |
Preference number: 6 (lower is better) Translates to: AGHRHCGSAGPW*KAWVQPAAPRL Trigger: TAGCCTCGGCGCTGCTGGCTGTACCCATGCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 72 bp | AGGCCACCAGGGTGCTGGCCATCGGCACTGCGGTTCTaGAGGCCCATGGTGAAAAGCATGGGTACAGCCAGC | + |
Preference number: 6 (lower is better) Translates to: RPPGCWPSALRF*RPMVKSMGTAS Trigger: GCTGGCTGTACCCATGCTTTTCACCATGGGCCTGCAGAACCGCAGTGCCGATGGCCAGCACCCTGGTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | ATCGTCTCCAGTCCGAACTGTGGATGTGGGAAGGGCTaGGCACCGGGTTCACTTGGGGCTCCCTGCTGCACG | + |
Preference number: 6 (lower is better) Translates to: IVSSPNCGCGKG*APGSLGAPCCT Trigger: CGTGCAGCAGGGAGCCCCAAGTGAACCCGGTGCCCAGCCCTTCCCACATCCACAGTTCGGACTGGAGACGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | CGGCCTGGCTCGATGGACATGTTGAACGTGCTGTGCTCTAAACTGTaGTGGGTGCCCACGGTGCACACACCACGGCCCTGCTCGGCAGCC | + |
Preference number: 6 (lower is better) Translates to: RPGSMDMLNVLCSKL*WVPTVHTPRPCSAA Trigger: GGCTGCCGAGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCATCGAGCCAGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | CCCGGGTGGCGCTGGTGGAAAACGCATGGTTGCTGGACATGCTGTTaGGCTTCCTGGAGAACGTTGGCCTCTTCTTTCGGCGGCGGCGCC | + |
Preference number: 6 (lower is better) Translates to: PGWRWWKTHGCWTCC*ASWRTLASSFGGGA Trigger: GGCGCCGCCGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCGCCACCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 72 bp | CCACGGCAGCCAGCATCCCCAAAGGCCCAGGGATGGTaGACCCAGATGAAGTTGTACAGCTCCACGGGCATG | + |
Preference number: 6 (lower is better) Translates to: PRQPASPKAQGW*TQMKLYSSTGM Trigger: CATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCACCATCCCTGGGCCTTTGGGGATGCTGGCTGCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | CCCACGGTGCACACACCACGGCCCTGCTCGGCAGCCTaGTGCACCATGACGGTCAGTTTGTTGGCTATCACA | + |
Preference number: 6 (lower is better) Translates to: PTVHTPRPCSAA*CTMTVSLLAIT Trigger: TGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGGTGTGTGCACCGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | CAGCCAGCATCCCCAAAGGCCCAGGGATGGTGCACCCAGATGAAGTaGTACAGCTCCACGGGCATGGCCAGCAGCAGGATGAGCAGGTCA | + |
Preference number: 6 (lower is better) Translates to: QPASPKAQGWCTQMK*YSSTGMASSRMSRS Trigger: TGACCTGCTCATCCTGCTGCTGGCCATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCACCATCCCTGGGCCTTTGGGGATGCTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | ACTCCATGGCGCAGGGCCTGGACACGGCCTGGCTCGATGGACATGTaGAACGTGCTGTGCTCTAAACTGTTGTGGGTGCCCACGGTGCAC | + |
Preference number: 6 (lower is better) Translates to: TPWRRAWTRPGSMDM*NVLCSKLLWVPTVH Trigger: GTGCACCGTGGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCATCGAGCCAGGCCGTGTCCAGGCCCTGCGCCATGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | TCTGCAGGCTCTGCAGCGACTTCTTCCGCGCTAGAGTaGAGGCTGTCACCGAGTTGCCCACAGTGCCCACCA | + |
Preference number: 6 (lower is better) Translates to: SAGSAATSSALE*RLSPSCPQCPP Trigger: TGGTGGGCACTGTGGGCAACTCGGTGACAGCCTTCACTCTAGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | AGTTGTACAGCTCCACGGGCATGGCCAGCAGCAGGATaGGCAGGTCAGACAGTGCCAGGCTACCCAGGTGGT | + |
Preference number: 6 (lower is better) Translates to: SCTAPRAWPAAG*AGQTVPGYPGG Trigger: ACCACCTGGGTAGCCTGGCACTGTCTGACCTGCTCATCCTGCTGCTGGCCATGCCCGTGGAGCTGTACAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | CAGCATCCCCAAAGGCCCAGGGATGGTGCACCCAGATaGAGTTGTACAGCTCCACGGGCATGGCCAGCAGCA | + |
Preference number: 6 (lower is better) Translates to: QHPQRPRDGAPR*SCTAPRAWPAA Trigger: TGCTGCTGGCCATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCACCATCCCTGGGCCTTTGGGGATGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 72 bp | ACGGTGCACACACCACGGCCCTGCTCGGCAGCCTGGTaGACCATGACGGTCAGTTTGTTGGCTATCACAGTG | + |
Preference number: 6 (lower is better) Translates to: TVHTPRPCSAAW*TMTVSLLAITV Trigger: CACTGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGGTGTGTGCACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 72 bp | TCCCCAAAGGCCCAGGGATGGTGCACCCAGATGAAGTaGTACAGCTCCACGGGCATGGCCAGCAGCAGGATG | + |
Preference number: 6 (lower is better) Translates to: SPKAQGWCTQMK*YSSTGMASSRM Trigger: CATCCTGCTGCTGGCCATGCCCGTGGAGCTGTACAACTTCATCTGGGTGCACCATCCCTGGGCCTTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 72 bp | CGCAGGGCCTGGACACGGCCTGGCTCGATGGACATGTaGAACGTGCTGTGCTCTAAACTGTTGTGGGTGCCC | + |
Preference number: 6 (lower is better) Translates to: RRAWTRPGSMDM*NVLCSKLLWVP Trigger: GGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCATCGAGCCAGGCCGTGTCCAGGCCCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | TGGCCAAGTAGCGCTCCACACTCAGGCTGGCTACATTaGGGGCTGTGGCATAGGTGCAGGCATCTCGCAGGA | + |
Preference number: 6 (lower is better) Translates to: WPSSAPHSGWLH*GLWHRCRHLAG Trigger: TCCTGCGAGATGCCTGCACCTATGCCACAGCCCTCAATGTAGCCAGCCTGAGTGTGGAGCGCTACTTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | GCAGGGCCTGGACACGGCCTGGCTCGATGGACATGTTaGACGTGCTGTGCTCTAAACTGTTGTGGGTGCCCA | + |
Preference number: 6 (lower is better) Translates to: AGPGHGLARWTC*TCCALNCCGCP Trigger: TGGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCATCGAGCCAGGCCGTGTCCAGGCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 72 bp | CAGACAGTGCCAGGCTACCCAGGTGGTAATGCACAGTaGTCTGCAGGCTCTGCAGCGACTTCTTCCGCGCTA | + |
Preference number: 6 (lower is better) Translates to: QTVPGYPGGNAQ*SAGSAATSSAL Trigger: TAGCGCGGAAGAAGTCGCTGCAGAGCCTGCAGAGCACTGTGCATTACCACCTGGGTAGCCTGGCACTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | ACAGCCAGCAGCGCCGAGGCTAGCCATATGGCACTGATGAATTTCTaGGTGCGGCTGCGGGACATGAGGGTCTTGGCCTTGAAGGGATGG | + |
Preference number: 6 (lower is better) Translates to: TASSAEASHMALMNF*VRLRDMRVLALKGW Trigger: CCATCCCTTCAAGGCCAAGACCCTCATGTCCCGCAGCCGCACCAAGAAATTCATCAGTGCCATATGGCTAGCCTCGGCGCTGCTGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | CTCTGCAGCGACTTCTTCCGCGCTAGAGTGAAGGCTGTCACCGAGTaGCCCACAGTGCCCACCACAAAAAGTGCCAGGTATACAGCGGTC | + |
Preference number: 6 (lower is better) Translates to: LCSDFFRARVKAVTE*PTVPTTKSARYTAV Trigger: GACCGCTGTATACCTGGCACTTTTTGTGGTGGGCACTGTGGGCAACTCGGTGACAGCCTTCACTCTAGCGCGGAAGAAGTCGCTGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS GCA 72 bp | GGGTTTCCCGGGTGGCGCTGGTGGAAAACGCATGGTTaGTGGACATGCTGTTTGGCTTCCTGGAGAACGTTG | + |
Preference number: 6 (lower is better) Translates to: GFPGWRWWKTHG*WTCCLASWRTL Trigger: CAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCGCCACCCGGGAAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | ATGGACATGTTGAACGTGCTGTGCTCTAAACTGTTGTaGGTGCCCACGGTGCACACACCACGGCCCTGCTCG | + |
Preference number: 6 (lower is better) Translates to: MDMLNVLCSKLL*VPTVHTPRPCS Trigger: CGAGCAGGGCCGTGGTGTGTGCACCGTGGGCACCCACAACAGTTTAGAGCACAGCACGTTCAACATGTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | AAAACGCATGGTTGCTGGACATGCTGTTTGGCTTCCTaGAGAACGTTGGCCTCTTCTTTCGGCGGCGGCGCC | + |
Preference number: 6 (lower is better) Translates to: KTHGCWTCCLAS*RTLASSFGGGA Trigger: GGCGCCGCCGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | TTTCCCGGGTGGCGCTGGTGGAAAACGCATGGTTGCTaGACATGCTGTTTGGCTTCCTGGAGAACGTTGGCC | + |
Preference number: 6 (lower is better) Translates to: FPGWRWWKTHGC*TCCLASWRTLA Trigger: GGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCGCCACCCGGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 72 bp | AGCGCCGAGGCTAGCCATATGGCACTGATGAATTTCTaGGTGCGGCTGCGGGACATGAGGGTCTTGGCCTTG | + |
Preference number: 6 (lower is better) Translates to: SAEASHMALMNF*VRLRDMRVLAL Trigger: CAAGGCCAAGACCCTCATGTCCCGCAGCCGCACCAAGAAATTCATCAGTGCCATATGGCTAGCCTCGGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | ACACACCACGGCCCTGCTCGGCAGCCTGGTGCACCATaGCGGTCAGTTTGTTGGCTATCACAGTGTTTAGGA | + |
Preference number: 6 (lower is better) Translates to: THHGPARQPGAP*RSVCWLSQCLG Trigger: TCCTAAACACTGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 72 bp | AGGAAGGACATGAAGGTGTTAACCTGGATGACGACCTaGACGGTGGCTGTGTCCACCGTGGGTGTGCACACC | + |
Preference number: 6 (lower is better) Translates to: RKDMKVLTWMTT*TVAVSTVGVHT Trigger: GGTGTGCACACCCACGGTGGACACAGCCACCGTCAAGGTCGTCATCCAGGTTAACACCTTCATGTCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | CCACGGCCCTGCTCGGCAGCCTGGTGCACCATGACGGTCAGTTTGTaGGCTATCACAGTGTTTAGGATGGAGATGATCAGCATGGGAAAC | + |
Preference number: 6 (lower is better) Translates to: PRPCSAAWCTMTVSL*AITVFRMEMISMGN Trigger: GTTTCCCATGCTGATCATCTCCATCCTAAACACTGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 90 bp | ACACCACGGCCCTGCTCGGCAGCCTGGTGCACCATGACGGTCAGTTaGTTGGCTATCACAGTGTTTAGGATGGAGATGATCAGCATGGGA | + |
Preference number: 6 (lower is better) Translates to: TPRPCSAAWCTMTVS*LAITVFRMEMISMG Trigger: TCCCATGCTGATCATCTCCATCCTAAACACTGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCAGGGCCGTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | GCTGGTGGAAAACGCATGGTTGCTGGACATGCTGTTTaGCTTCCTGGAGAACGTTGGCCTCTTCTTTCGGCG | + |
Preference number: 6 (lower is better) Translates to: AGGKRMVAGHAV*LPGERWPLLSA Trigger: CGCCGAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 72 bp | GACTTCTTCCGCGCTAGAGTGAAGGCTGTCACCGAGTaGCCCACAGTGCCCACCACAAAAAGTGCCAGGTAT | + |
Preference number: 6 (lower is better) Translates to: DFFRARVKAVTE*PTVPTTKSARY Trigger: ATACCTGGCACTTTTTGTGGTGGGCACTGTGGGCAACTCGGTGACAGCCTTCACTCTAGCGCGGAAGAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 72 bp | CGCTGGTGGAAAACGCATGGTTGCTGGACATGCTGTTaGGCTTCCTGGAGAACGTTGGCCTCTTCTTTCGGC | + |
Preference number: 6 (lower is better) Translates to: RWWKTHGCWTCC*ASWRTLASSFG Trigger: GCCGAAAGAAGAGGCCAACGTTCTCCAGGAAGCCAAACAGCATGTCCAGCAACCATGCGTTTTCCACCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CCA 72 bp | CAGTGTTCACGTCCAGGTTGCTGTTGGGCTCCAGGATaGATTCTGAGGAATTGCCAGAACCATTGCTCAAGC | + |
Preference number: 6 (lower is better) Translates to: QCSRPGCCWAPG*ILRNCQNHCSS Trigger: GCTTGAGCAATGGTTCTGGCAATTCCTCAGAATCCATCCTGGAGCCCAACAGCAACCTGGACGTGAACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS CAA 72 bp | TGCTCGGCAGCCTGGTGCACCATGACGGTCAGTTTGTaGGCTATCACAGTGTTTAGGATGGAGATGATCAGC | + |
Preference number: 6 (lower is better) Translates to: CSAAWCTMTVSL*AITVFRMEMIS Trigger: GCTGATCATCTCCATCCTAAACACTGTGATAGCCAACAAACTGACCGTCATGGTGCACCAGGCTGCCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |
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CDS TCA 72 bp | GTAGAAGTCGAAGAGGAACGTAGTCCACTGTTCATCTaGGATATAGCAGAACATGAGGCGCCGCACGTGGTA | + |
Preference number: 6 (lower is better) Translates to: VEVEEERSPLFI*DIAEHEAPHVV Trigger: TACCACGTGCGGCGCCTCATGTTCTGCTATATCTCAGATGAACAGTGGACTACGTTCCTCTTCGACTTCTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029084.9 ENSMUST00000170448.2 |