Pregenerated sensors for NTRK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028072Ensembl transcript IDs: ENSMUST00000029712.5
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTaGCCTGGCACCAAAACTTGG | + |
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Preference number: 2 (lower is better) Translates to: GPLHMLRVRDLNVVAPGHRGSPG*PGTKTW Trigger: CCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCG...GTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| 3UTR CCA 72 bp | CATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTaGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAA | + |
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Preference number: 3 (lower is better) Translates to: HAEGERLECGSS*APREPRVAWHQ Trigger: TTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCACTGGGTGGCGCCTGTaGCAGGGCCTGCAGACGCGC | + |
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Preference number: 4 (lower is better) Translates to: MDAGHEARPPSTPRLLGPTGWRL*QGLQTR Trigger: GCGCGTCTGCAGGCCCTGGCACAGGCGCCACCCAGT...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCCCAGCGCAGAGACGGTaGTGGCTGCCCGTCCACCGA | + |
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Preference number: 4 (lower is better) Translates to: MDAGHEARPPSTPRLLGPPAQRR*WLPVHR Trigger: TCGGTGGACGGGCAGCCAGCACCGTCTCTGCGCTGG...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCCTGTGCCAGGGCCTaGAGACGCGCGTGCACATCC | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLACARA*RRACTS Trigger: GGATGTGCACGCGCGTCTGCAGGCCCTGGCACAGGC...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCGCGCAGAGACGGTGCTaGCTGCCCGTCCACCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MDAGHEARPPSTPRLLGPAQRRC*LPVHRE Trigger: TTCTCGGTGGACGGGCAGCCAGCACCGTCTCTGCGC...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGAGAGACGGTGCTGGCTaGCCGTCCACCGAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLRDGAG*PSTEKG Trigger: CCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCT...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | GGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCCAGGGACCCTGCCCTaGTGCAGCGCAGCCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLHMLRVRDLNVVAPGHPGTLP*CSAAPR Trigger: CCTCGGGGCTGCGCTGCACCAGGGCAGGGTCCCTGG...GTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | GGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCTAGCGGATGGGCAGCATaGTCCGACCTCCCACTCGGT | + |
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Preference number: 4 (lower is better) Translates to: GSSWAPREPRVAWHQNLASGWAA*SDLPLG Trigger: ACCGAGTGGGAGGTCGGACCATGCTGCCCATCCGCT...AGCCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | GGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCTGAGGATGCTCTCGGGTaGCATCCAGCGGATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GSSWAPREPRVAWHQNLAEDALG*HPADGQ Trigger: CTGCCCATCCGCTGGATGCCACCCGAGAGCATCCTC...AGCCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | GGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCTGACCCACCAGACAGTTaGGTGTGGCCAGATCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GSSWAPREPRVAWHQNLADPPDS*VWPDPG Trigger: ACCGGGATCTGGCCACACGCAACTGTCTGGTGGGTC...AGCCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | GTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGGCCAGCCCCTCCACCTaGCACTGCAGAAACACGTCA | + |
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Preference number: 4 (lower is better) Translates to: VVAPGHRGSPGWPGTKTWASPST*HCRNTS Trigger: TGACGTGTTTCTGCAGTGCCAGGTGGAGGGGCTGGC...CCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCAACTCCCCCAGGCCCTaGAGGTCCTCAAACTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: MDAGHEARPPSTPRLLGPNSPRP*RSSNSK Trigger: CTTGGAGTTTGAGGACCTGCAGGGCCTGGGGGAGTT...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGAGGCGCAGGCAGCCGTaGCGCATGGTCTCATTAGTC | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLRRRQP*RMVSLV Trigger: GACTAATGAGACCATGCGGCACGGCTGCCTGCGCCT...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCCGCACGATGTGCTGGTaGTGTAGCATGGTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MDAGHEARPPSTPRLLGPRTMCW*CSMVSS Trigger: GCTGCTCACCATGCTACAGCACCAGCACATCGTGCG...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGATGCTGAGGCGTTGCTaGGGTTCTCGCTGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLMLRRC*GSRCQQ Trigger: CTGCTGGCAGCGAGAACCGCAGCAACGCCTCAGCAT...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | GTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGATACCAGCAGCCACCTaGCTAGCCACAGCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVAPGHRGSPGWPGTKTWIPAAT*LATARS Trigger: GCTTCTGGCTGTGGCTAGCCAGGTGGCTGCTGGTAT...CCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | GGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCTCCAGACAGTTGCGTGTaGCCAGATCCCGGTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: GSSWAPREPRVAWHQNLAPDSCV*PDPGAQ Trigger: TTGTGCACCGGGATCTGGCCACACGCAACTGTCTGG...AGCCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | TCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTCCAGGTAACTGGGTaGCGCCTGTGCCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: STPRLLGPLHMLRVRDLNVQVTG*RLCQGL Trigger: CAGGCCCTGGCACAGGCGCCACCCAGTTACCTGGAC...ATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCGAGGACAGATTCAGGTaGCTGAGCCGAGGGGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: MDAGHEARPPSTPRLLGPEDRFR*LSRGVK Trigger: TTTCACCCCTCGGCTCAGTCACCTGAATCTGTCCTC...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | TCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATTTGACATGCGTGGGCTaGTTGAGGCGCAGGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: STPRLLGPLHMLRVRDLNLTCVG*LRRRQP Trigger: CGGCTGCCTGCGCCTCAATCAGCCCACGCATGTCAA...ATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | GGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCTTGTAGGGAGAGGCCCTaGACAGTTTTCCAGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSSWAPREPRVAWHQNLACRERP*TVFQER Trigger: CCTCTCCTGGAAAACTGTGCAGGGCCTCTCCCTACA...AGCCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGTTCATGCTGAGGCGTTaGTGCGGTTCTCGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLFMLRR*CGSRCQ Trigger: CTGGCAGCGAGAACCGCAGCAACGCCTCAGCATGAA...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGCAGGTGCACACTGGCTaGGAAGGAGACGCTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLQVHTG*EGDADL Trigger: CAAGTCAGCGTCTCCTTCCCAGCCAGTGTGCACCTG...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | GTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGGCTGTTACCGTCCACTaGCGAGAAGGAGACAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VVAPGHRGSPGWPGTKTWAVTVH*REGDRD Trigger: ATCCCTGTCTCCTTCTCGCCAGTGGACGGTAACAGC...CCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGCCACACAGCCCTTCCTaGTCCCAACGCTGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SPPHAEGERLECGSSWAPPHSPS*SQRWSQ Trigger: CTGGCTCCAGCGTTGGGAGCAGGAAGGGCTGTGTGG...CGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | GAATGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACCCGAGCATTCTCGGATaGCTCCTTCAGTGCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: ECGSSWAPREPRVAWHQNPSILG*LLQCLD Trigger: GTCAAGGCACTGAAGGAGGCATCCGAGAATGCTCGG...GTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | TCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATAAGGGGATGCACCAATaGTGCTGCTCCACCGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: STPRLLGPLHMLRVRDLNKGMHQ*CCSTAR Trigger: CCTAGCGGTGGAGCAGCATCATTGGTGCATCCCCTT...ATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | GAATGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTGGGGTCCTCAGGGTTaGACTCAAAAGGGTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ECGSSWAPREPRVAWHQNWGPQG*TQKGCP Trigger: TGGACAACCCTTTTGAGTTCAACCCTGAGGACCCCA...GTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | GGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCTATACAGCAGGGCGGTTaGTCCCAAATTTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GSSWAPREPRVAWHQNLAIQQGG*SQICSS Trigger: AGAGGAGCAAATTTGGGATCAACCGCCCTGCTGTAT...AGCCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | TCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGACTGTGGGTTCTCCATaGTGTGGCCCTGGAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SPPHAEGERLECGSSWAPTVGSP*CGPGVR Trigger: CCGGACTCCAGGGCCACATCATGGAGAACCCACAGT...CGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | GTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGGGACACAGGTATCACTaGAGTACTGTGGGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VVAPGHRGSPGWPGTKTWGHRYH*STVGSP Trigger: TGGAGAACCCACAGTACTTCAGTGATACCTGTGTCC...CCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | TCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATTGTACTCAAAGACCATaGGCAACGGGCCACCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: STPRLLGPLHMLRVRDLNCTQRP*ATGHPR Trigger: CCGAGGGTGGCCCGTTGCTCATGGTCTTTGAGTACA...ATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | TCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATCATCGCTCTCGGTGCTaGACTTGCGGTAGAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: STPRLLGPLHMLRVRDLNHRSRC*TCGRGC Trigger: GCATCCTCTACCGCAAGTTCAGCACCGAGAGCGATG...ATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | TCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGTCCATGATGTGGCCCTaGAGTCCGGAGCCTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPPHAEGERLECGSSWAPSMMWP*SPEPLP Trigger: GGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGA...CGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | TCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGGGGTTCTCCATGATGTaGCCCTGGAGTCCGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SPPHAEGERLECGSSWAPGFSMM*PWSPEP Trigger: AGGCTCCGGACTCCAGGGCCACATCATGGAGAACCC...CGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGGATGCCTCCTTCAGTaGCTTGACAGCCACGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: STPRLLGPLHMLRVRDLNGCLLQ*LDSHEH Trigger: ATGCTCGTGGCTGTCAAGGCACTGAAGGAGGCATCC...ATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | ATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCGGTATCCAGGGACCCTaGCCTGGTGCAGCGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: IIAIMMDAGHEARPPSTPGIQGP*PGAAQP Trigger: GGGCTGCGCTGCACCAGGGCAGGGTCCCTGGATACC...GGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGAGTCATTGGGCATCTaGATCTTCACTGTGGGTACA | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLESLGI*IFTVGT Trigger: TGTACCCACAGTGAAGATCCAGATGCCCAATGACTC...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCAATCAGCCCCAGGGATaGCAGATCTCCAAATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: MDAGHEARPPSTPRLLGPNQPQG*QISKFL Trigger: AAGAAATTTGGAGATCTGCCATCCCTGGGGCTGATT...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | TCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGAAGCGCACGATGTGCTaGTGCTGTAGCATGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPPHAEGERLECGSSWAPKRTMC*CCSMVS Trigger: GCTCACCATGCTACAGCACCAGCACATCGTGCGCTT...CGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | CTCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAAATCACTGAAGTACTGTaGGTTCTCCATGATGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LHSPPAGSPPHAEGERLEITEVL*VLHDVA Trigger: GGCCACATCATGGAGAACCCACAGTACTTCAGTGAT...TTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | TGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGCTCGGTAATAGTCTGTaGTATAGATGTCTCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CGSSWAPREPRVAWHQNLLGNSL*YRCLCS Trigger: TGAGCAGAGACATCTATAGCACAGACTATTACCGAG...CAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR TCA 90 bp | TCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGGCAGACTCCAAGAACTaGGTGAAGATGAAACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPPHAEGERLECGSSWAPADSKN*VKMKLV Trigger: GACCAGTTTCATCTTCACTCAGTTCTTGGAGTCTGC...CGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | ATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCCCTCCACCTGGCACTaGAGAAACACGTCATCGCCC | + |
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Preference number: 4 (lower is better) Translates to: IIAIMMDAGHEARPPSTPPSTWH*RNTSSP Trigger: GGGCGATGACGTGTTTCTGCAGTGCCAGGTGGAGGG...GGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTAT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR GCA 90 bp | ATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCACCAGCCAGCAGCTTTaGATCAGGTCCGTGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: IIAIMMDAGHEARPPSTPTSQQL*IRSVGP Trigger: CGGTCCCACGGACCTGATGCAAAGCTGCTGGCTGGT...GGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CCA 90 bp | ATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCGAAACGGAAGGCATCTaGGGCCACAAAGCGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIAIMMDAGHEARPPSTPETEGI*GHKAEA Trigger: GGCCTCCGCTTTGTGGCCCCAGATGCCTTCCGTTTC...GGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CCA 90 bp | TCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGCTTCCACAGAGTCATTaGGCATCTGGATCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPHAEGERLECGSSWAPLPQSH*ASGSSL Trigger: CAGTGAAGATCCAGATGCCCAATGACTCTGTGGAAG...CGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CCA 90 bp | ATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCAAGGAGACGCTGACTTaGACAGAGACCTCGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IIAIMMDAGHEARPPSTPKETLT*TETSAR Trigger: CCGGGCCGAGGTCTCTGTCCAAGTCAGCGTCTCCTT...GGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CCA 90 bp | ATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCGGTGTTGTGTCCCAGTaGGAGGAACTGGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIAIMMDAGHEARPPSTPGVVSQ*EELVSR Trigger: CCTGGAGACCAGTTCCTCCCACTGGGACACAACACC...GGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR TCA 90 bp | AATATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTTTCACCACTAGTCCCTaGCCCACCAGACAGTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NIIAIMMDAGHEARPPSTFTTSP*PTRQLR Trigger: ACGCAACTGTCTGGTGGGTCAGGGACTAGTGGTGAA...AGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CCA 90 bp | AATATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTTTTGCATCAGGTCCGTaGGACCGGAGGAAACGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NIIAIMMDAGHEARPPSTFASGP*DRRKRL Trigger: CAACCGTTTCCTCCGGTCCCACGGACCTGATGCAAA...AGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR TCA 90 bp | AATATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTTCTGTCCACATTTGTTaGGCACAAGAAGGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NIIAIMMDAGHEARPPSTSVHIC*AQEGGQ Trigger: CTGCCCTCCTTCTTGTGCTCAACAAATGTGGACAGA...AGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR GCA 90 bp | AATATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTGCCCACATCATTCTCTaGCCAGCACGTCACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIIAIMMDAGHEARPPSTAHIIL*PARHIL Trigger: AAGAATGTGACGTGCTGGGCAGAGAATGATGTGGGC...AGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 90 bp | ACCAGCGCAGAGACGGTGCTGGCTGCCCGTCCACCGAGAAGGGGATaGACCAATGATGCTGCTCCACCGCTAGGCCCAGGTGCACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSAETVLAARPPRRG*TNDAAPPLGPGAHW Trigger: CCAGTGTGCACCTGGGCCTAGCGGTGGAGCAGCATCATTGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCTGCGCTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS TCA 90 bp | AGAGACGGTGCTGGCTGCCCGTCCACCGAGAAGGGGATGCACCAATaGTGCTGCTCCACCGCTAGGCCCAGGTGCACACTGGCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RDGAGCPSTEKGMHQ*CCSTARPRCTLAGK Trigger: CTTCCCAGCCAGTGTGCACCTGGGCCTAGCGGTGGAGCAGCATCATTGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | GGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACTTGGCTTCCCCTAGCTCCCACTaGAGAATGATGTCCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSWAPREPRVAWHQNLASPSSH*RMMSWR Trigger: GCGCCAGGACATCATTCTCAAGTGGGAGCTAGGGGA...AGCCAAGTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 90 bp | CCTTCCTGCTCCCAACGCTGGAGCCAGAACAGGGCACAGGAACAATaGAGTGGGTTCCCTGACAGGGTCAGGTCCTGTAGGGAGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSCSQRWSQNRAQEQ*SGFPDRVRSCRERP Trigger: GGGCCTCTCCCTACAGGACCTGACCCTGTCAGGGAACCCACTGCATTGTTCCTGTGCCCTGTTCTGGCTCCAGCGTTGGGAGCAGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 90 bp | TTCACGGTGGCTGCCCCTTCCAGCTCTGTGAGGATCCAGTCAGCCTaGTGTAGGGCCAGCCCCTCCACCTGGCACTGCAGAAACACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FTVAAPSSSVRIQSA*CRASPSTWHCRNTS Trigger: TGACGTGTTTCTGCAGTGCCAGGTGGAGGGGCTGGCCCTACAGCAGGCTGACTGGATCCTCACAGAGCTGGAAGGGGCAGCCACCGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | ATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCCGCCTGCTGGGTCCCTTGAGCACAGAGCCGTaGAACAACCAGCGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MDAGHEARPPSTPRLLGPLSTEP*NNQRRD Trigger: GTCTCTGCGCTGGTTGTTCAACGGCTCTGTGCTCAA...GGGACCCAGCAGGCGGGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | CCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGAGGGACCGGAGGAAACGGTaGAGGTCCCCGTGGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PPHAEGERLECGSSWAPRDRRKR*RSPWRM Trigger: CATGCGCCACGGGGACCTCAACCGTTTCCTCCGGTC...CCTCGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 90 bp | GGTCTCGTTGAGCACAGAGCCGTTGAACAACCAGCGCAGAGACGGTaGTGGCTGCCCGTCCACCGAGAAGGGGATGCACCAATGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLVEHRAVEQPAQRR*WLPVHREGDAPMML Trigger: CAGCATCATTGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCTGCGCTGGTTGTTCAACGGCTCTGTGCTCAACGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CCA 90 bp | CTCGTTGAGCACAGAGCCGTTGAACAACCAGCGCAGAGACGGTGCTaGCTGCCCGTCCACCGAGAAGGGGATGCACCAATGATGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVEHRAVEQPAQRRC*LPVHREGDAPMMLL Trigger: GAGCAGCATCATTGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCTGCGCTGGTTGTTCAACGGCTCTGTGCTCAACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | CCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCGAGGGAAGGAGACGCTGACTaGGACAGAGACCTCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPHAEGERLECGSSWAPREGDAD*DRDLGP Trigger: CGGGCCGAGGTCTCTGTCCAAGTCAGCGTCTCCTTC...CCTCGGTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACCACCAGCCAGCAGCTTaGCATCAGGTCCGTGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GPLHMLRVRDLNVVAPGHHQPAA*HQVRGT Trigger: GGTCCCACGGACCTGATGCAAAGCTGCTGGCTGGTG...GTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | GAATGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACCTCAAACTCCAAGCGTaGCAGGTGCTGCTGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ECGSSWAPREPRVAWHQNLKLQA*QVLLVF Trigger: GAAAACCAGCAGCACCTGCAACGCTTGGAGTTTGAG...GTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | GAATGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACATGGGGTCCTCAGGGTaGAACTCAAAAGGGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ECGSSWAPREPRVAWHQNMGSSG*NSKGLS Trigger: GGACAACCCTTTTGAGTTCAACCCTGAGGACCCCAT...GTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 90 bp | TGCAGTGGGTTCCCTGACAGGGTCAGGTCCTGTAGGGAGAGGCCCTaGACAGTTTTCCAGGAGAGGGACTCCAACGCATTGGAGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSGFPDRVRSCRERP*TVFQERDSNALEDR Trigger: TCTGTCCTCCAATGCGTTGGAGTCCCTCTCCTGGAAAACTGTGCAGGGCCTCTCCCTACAGGACCTGACCCTGTCAGGGAACCCACTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CCA 90 bp | AGCGTCTGTGTATGCACACCACACAGCCCTTCCTGCTCCCAACGCTaGAGCCAGAACAGGGCACAGGAACAATGCAGTGGGTTCCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVCVCTPHSPSCSQR*SQNRAQEQCSGFPD Trigger: GTCAGGGAACCCACTGCATTGTTCCTGTGCCCTGTTCTGGCTCCAGCGTTGGGAGCAGGAAGGGCTGTGTGGTGTGCATACACAGACGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CCA 90 bp | TCTGTGAGGATCCAGTCAGCCTGCTGTAGGGCCAGCCCCTCCACCTaGCACTGCAGAAACACGTCATCGCCCACTTCCACAGAGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SVRIQSACCRASPST*HCRNTSSPTSTESL Trigger: CAATGACTCTGTGGAAGTGGGCGATGACGTGTTTCTGCAGTGCCAGGTGGAGGGGCTGGCCCTACAGCAGGCTGACTGGATCCTCACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS TCA 90 bp | GTGTTGTGTCCCAGTGGGAGGAACTGGTCTCCAGGCCCAGAGTCATaGAGCGTCTGTGTATGCACACCACACAGCCCTTCCTGCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLCPSGRNWSPGPES*SVCVCTPHSPSCSQ Trigger: TTGGGAGCAGGAAGGGCTGTGTGGTGTGCATACACAGACGCTTCATGACTCTGGGCCTGGAGACCAGTTCCTCCCACTGGGACACAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 90 bp | AGGCCACTCTTCACGATGGTTAGGCTTCTCAACTCCCCCAGGCCCTaGAGGTCCTCAAACTCCAAGCGTTGCAGGTGCTGCTGGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLFTMVRLLNSPRP*RSSNSKRCRCCWFS Trigger: GGAAAACCAGCAGCACCTGCAACGCTTGGAGTTTGAGGACCTGCAGGGCCTGGGGGAGTTGAGAAGCCTAACCATCGTGAAGAGTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CAA 90 bp | CTCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAACTCCTCTGTCCACATTaGTTGAGCACAAGAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHSPPAGSPPHAEGERLELLCPH*LSTRRR Trigger: CCTCCTTCTTGTGCTCAACAAATGTGGACAGAGGAG...TTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS-3UTR CAA 90 bp | GAATGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACCGGTTGATCCCAAATTaGCTCCTCTGTCCACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ECGSSWAPREPRVAWHQNRLIPN*LLCPHL Trigger: CAAATGTGGACAGAGGAGCAAATTTGGGATCAACCG...GTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 90 bp | GTCCTGGCGCTTGATGTGATGGACACAGGTATCACTGAAGTACTGTaGGTTCTCCATGATGTGGCCCTGGAGTCCGGAGCCTTTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLALDVMDTGITEVL*VLHDVALESGAFAL Trigger: GAGGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGAGAACCCACAGTACTTCAGTGATACCTGTGTCCATCACATCAAGCGCCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATGTGGTAGCTCCTGGGCACTCTCCACTGGGTCTCTaGATGTGCTGTTACCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLHMLRVRDLNVVAPGHSPLGL*MCCYRP Trigger: TGGACGGTAACAGCACATCAAGAGACCCAGTGGAGA...GTGCCCAGGAGCTACCACATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | TCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAATCTCTGTCCACATTTGTaGAGCACAAGAAGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: STPRLLGPLHMLRVRDLNLCPHL*STRRRA Trigger: TGCCCTCCTTCTTGTGCTCAACAAATGTGGACAGAG...ATTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CCA 90 bp | CAGAGTCATTGGGCATCTGGATCTTCACTGTGGGTACACCACAACTaGTGTTGTGTCCCAGTGGGAGGAACTGGTCTCCAGGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSHWASGSSLWVHHN*CCVPVGGTGLQAQS Trigger: ACTCTGGGCCTGGAGACCAGTTCCTCCCACTGGGACACAACACCAGTTGTGGTGTACCCACAGTGAAGATCCAGATGCCCAATGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | GAATGTGGTAGCTCCTGGGCACCGAGGGAGCCCAGGGTGGCCTGGCACCAAAACGTCACATTCTTCTTGTaGAGATCACTGGTGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: ECGSSWAPREPRVAWHQNVTFFL*RSLVTL Trigger: CAATGTCACCAGTGATCTCAACAAGAAGAATGTGAC...GTTTTGGTGCCAGGCCACCCTGGGCTCCCTCGGTGCCCAGGAGCTACCACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | CTCCACTCCCCGCCTGCTGGGTCCCCTCCACATGCTGAGGGTGAGAGACTTGAACACGTCACATTCTTCTaGTTGAGATCACTGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LHSPPAGSPPHAEGERLEHVTFF*LRSLVT Trigger: TGTCACCAGTGATCTCAACAAGAAGAATGTGACGTG...TTCAAGTCTCTCACCCTCAGCATGTGGAGGGGACCCAGCAGGCGGGGAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 90 bp | GACGCTGACTTGGACAGAGACCTCGGCCCGGCCCACATCATTCTCTaGCCAGCACGTCACATTCTTCTTGTTGAGATCACTGGTGACATT | + |
|
Preference number: 5 (lower is better) Translates to: DADLDRDLGPAHIIL*PARHILLVEITGDI Trigger: AATGTCACCAGTGATCTCAACAAGAAGAATGTGACGTGCTGGGCAGAGAATGATGTGGGCCGGGCCGAGGTCTCTGTCCAAGTCAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CCA 90 bp | ACACAGGTATCACTGAAGTACTGTGGGTTCTCCATGATGTGGCCCTaGAGTCCGGAGCCTTTGCCCTCAGTAGGGGAAAGAGAACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQVSLKYCGFSMMWP*SPEPLPSVGERELP Trigger: TGGCAGTTCTCTTTCCCCTACTGAGGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGAGAACCCACAGTACTTCAGTGATACCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS TCA 90 bp | CAGCCGTGCCGCATGGTCTCATTAGTCAGCGCAGACTCCAAGAACTaGGTGAAGATGAAACTGGTCTCGTTGAGCACAGAGCCGTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QPCRMVSLVSADSKN*VKMKLVSLSTEPLN Trigger: GTTCAACGGCTCTGTGCTCAACGAGACCAGTTTCATCTTCACTCAGTTCTTGGAGTCTGCGCTGACTAATGAGACCATGCGGCACGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CCA 90 bp | CTTGTTGAGATCACTGGTGACATTGACCAGAATCAGCCCCAGGGATaGCAGATCTCCAAATTTCTTCACGGTGGCTGCCCCTTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVEITGDIDQNQPQG*QISKFLHGGCPFQL Trigger: GAGCTGGAAGGGGCAGCCACCGTGAAGAAATTTGGAGATCTGCCATCCCTGGGGCTGATTCTGGTCAATGTCACCAGTGATCTCAACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS-3UTR CAA 90 bp | ATAATTGCTATTATGATGGATGCTGGCCATGAAGCAAGGCCACCCTCCACTCCCACACCACAACTGGTGTaGTGTCCCAGTGGGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IIAIMMDAGHEARPPSTPTPQLV*CPSGRN Trigger: GTTCCTCCCACTGGGACACAACACCAGTTGTGGTGT...GGGAGTGGAGGGTGGCCTTGCTTCATGGCCAGCATCCATCATAATAGCAATTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CCA 72 bp | CCCGCAGGCCGCGGAGGGTATCCAGGGACCCTGCCCTaGTGCAGCGCAGCCCCGAGGGGCCCACGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PAGRGGYPGTLP*CSAAPRGPRDS Trigger: GCTGTCCCGTGGGCCCCTCGGGGCTGCGCTGCACCAGGGCAGGGTCCCTGGATACCCTCCGCGGCCTGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 72 bp | GAAGTCATCAGACTGCCTAGCCCCGCGGCCGGGCGATaGCAGCCCAGCTGCCCGAGCCGCTGGCCTCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EVIRLPSPAAGR*QPSCPSRWPRS Trigger: GCTGCGAGGCCAGCGGCTCGGGCAGCTGGGCTGGCATCGCCCGGCCGCGGGGCTAGGCAGTCTGATGACTTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS TCA 72 bp | GGCAGGCGCGCGGCCGCTCCAGCTCCCGGCCCTGCGTaGTACACTCGATCGCCTCAGTGTTGGAGAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRAAAPAPGPA*YTRSPQCWRAG Trigger: ACCAGCTCTCCAACACTGAGGCGATCGAGTGTATCACGCAGGGCCGGGAGCTGGAGCGGCCGCGCGCCTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS TCA 72 bp | CCAGGGCCTGCAGACGCGCGTGCACATCCTTCATGCTaGGGCGTTGCTGCGGTTCTCGCTGCCAGCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGPADARAHPSC*GVAAVLAASSL Trigger: GAGGCTGCTGGCAGCGAGAACCGCAGCAACGCCTCAGCATGAAGGATGTGCACGCGCGTCTGCAGGCCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 72 bp | CTGGGTGGCGCCTGTGCCAGGGCCTGCAGACGCGCGTaGACATCCTTCATGCTGAGGCGTTGCTGCGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGGACARACRRA*TSFMLRRCCGS Trigger: AGAACCGCAGCAACGCCTCAGCATGAAGGATGTGCACGCGCGTCTGCAGGCCCTGGCACAGGCGCCACCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS TCA 72 bp | GCTGGCTGCCCGTCCACCGAGAAGGGGATGCACCAATaGTGCTGCTCCACCGCTAGGCCCAGGTGCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: AGCPSTEKGMHQ*CCSTARPRCTL Trigger: CAGTGTGCACCTGGGCCTAGCGGTGGAGCAGCATCATTGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS GCA 72 bp | GCTGCCCCTTCCAGCTCTGTGAGGATCCAGTCAGCCTaGTGTAGGGCCAGCCCCTCCACCTGGCACTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AAPSSSVRIQSA*CRASPSTWHCR Trigger: TCTGCAGTGCCAGGTGGAGGGGCTGGCCCTACAGCAGGCTGACTGGATCCTCACAGAGCTGGAAGGGGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
||
| CDS CAA 90 bp | TGCCAGGGCCTGCAGACGCGCGTGCACATCCTTCATGCTGAGGCGTaGCTGCGGTTCTCGCTGCCAGCAGCCTCGCATGATGGCGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CQGLQTRVHILHAEA*LRFSLPAASHDGVD Trigger: GTCTACGCCATCATGCGAGGCTGCTGGCAGCGAGAACCGCAGCAACGCCTCAGCATGAAGGATGTGCACGCGCGTCTGCAGGCCCTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | GAGCACAGAGCCGTTGAACAACCAGCGCAGAGACGGTaGTGGCTGCCCGTCCACCGAGAAGGGGATGCACCA | + |
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Preference number: 6 (lower is better) Translates to: EHRAVEQPAQRR*WLPVHREGDAP Trigger: TGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCTGCGCTGGTTGTTCAACGGCTCTGTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | CTAGCCCAGAACGTCCAGGTAACTGGGTGGCGCCTGTaGCAGGGCCTGCAGACGCGCGTGCACATCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LAQNVQVTGWRL*QGLQTRVHILH Trigger: ATGAAGGATGTGCACGCGCGTCTGCAGGCCCTGGCACAGGCGCCACCCAGTTACCTGGACGTTCTGGGCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | TGCAGACGCGCGTGCACATCCTTCATGCTGAGGCGTTaGTGCGGTTCTCGCTGCCAGCAGCCTCGCATGATG | + |
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Preference number: 6 (lower is better) Translates to: CRRACTSFMLRR*CGSRCQQPRMM Trigger: CATCATGCGAGGCTGCTGGCAGCGAGAACCGCAGCAACGCCTCAGCATGAAGGATGTGCACGCGCGTCTGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | CACAGAGCCGTTGAACAACCAGCGCAGAGACGGTGCTaGCTGCCCGTCCACCGAGAAGGGGATGCACCAATG | + |
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Preference number: 6 (lower is better) Translates to: HRAVEQPAQRRC*LPVHREGDAPM Trigger: CATTGGTGCATCCCCTTCTCGGTGGACGGGCAGCCAGCACCGTCTCTGCGCTGGTTGTTCAACGGCTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CAA 72 bp | CTGCAGACGCGCGTGCACATCCTTCATGCTGAGGCGTaGCTGCGGTTCTCGCTGCCAGCAGCCTCGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: LQTRVHILHAEA*LRFSLPAASHD Trigger: ATCATGCGAGGCTGCTGGCAGCGAGAACCGCAGCAACGCCTCAGCATGAAGGATGTGCACGCGCGTCTGCAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | CATCTGGGGCCACAAAGCGGAGGCCACTCTTCACGATaGTTAGGCTTCTCAACTCCCCCAGGCCCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HLGPQSGGHSSR*LGFSTPPGPAG Trigger: ACCTGCAGGGCCTGGGGGAGTTGAGAAGCCTAACCATCGTGAAGAGTGGCCTCCGCTTTGTGGCCCCAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | CAGGTGACTGAGCCGAGGGGTGAAACGGAAGGCATCTaGGGCCACAAAGCGGAGGCCACTCTTCACGATGGT | + |
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Preference number: 6 (lower is better) Translates to: QVTEPRGETEGI*GHKAEATLHDG Trigger: ACCATCGTGAAGAGTGGCCTCCGCTTTGTGGCCCCAGATGCCTTCCGTTTCACCCCTCGGCTCAGTCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | ATCCAGTCAGCCTGCTGTAGGGCCAGCCCCTCCACCTaGCACTGCAGAAACACGTCATCGCCCACTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: IQSACCRASPST*HCRNTSSPTST Trigger: TGTGGAAGTGGGCGATGACGTGTTTCTGCAGTGCCAGGTGGAGGGGCTGGCCCTACAGCAGGCTGACTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | TCCCAACGCTGGAGCCAGAACAGGGCACAGGAACAATaGAGTGGGTTCCCTGACAGGGTCAGGTCCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SQRWSQNRAQEQ*SGFPDRVRSCR Trigger: CCTACAGGACCTGACCCTGTCAGGGAACCCACTGCATTGTTCCTGTGCCCTGTTCTGGCTCCAGCGTTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | TGCAGGCTGGCTAGATATACCATACCAGCAGCCACCTaGCTAGCCACAGCCAGAAGCTGCCCAAGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CRLARYTIPAAT*LATARSCPRPR Trigger: TCTGGGCCTTGGGCAGCTTCTGGCTGTGGCTAGCCAGGTGGCTGCTGGTATGGTATATCTAGCCAGCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CAA 72 bp | GGGTTCTCCATGATGTGGCCCTGGAGTCCGGAGCCTTaGCCCTCAGTAGGGGAAAGAGAACTGCCACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GFSMMWPWSPEP*PSVGERELPPS Trigger: ACTGGGTGGCAGTTCTCTTTCCCCTACTGAGGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGAGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | TTCACGATGGTTAGGCTTCTCAACTCCCCCAGGCCCTaGAGGTCCTCAAACTCCAAGCGTTGCAGGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FTMVRLLNSPRP*RSSNSKRCRCC Trigger: GCAGCACCTGCAACGCTTGGAGTTTGAGGACCTGCAGGGCCTGGGGGAGTTGAGAAGCCTAACCATCGTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | TTCCCTGACAGGGTCAGGTCCTGTAGGGAGAGGCCCTaGACAGTTTTCCAGGAGAGGGACTCCAACGCATTG | + |
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Preference number: 6 (lower is better) Translates to: FPDRVRSCRERP*TVFQERDSNAL Trigger: CAATGCGTTGGAGTCCCTCTCCTGGAAAACTGTGCAGGGCCTCTCCCTACAGGACCTGACCCTGTCAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | GGCCTCACGCTGAAAGTCCTGCCGAGCATTCTCGGATaGCTCCTTCAGTGCCTTGACAGCCACGAGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GLTLKVLPSILG*LLQCLDSHEHL Trigger: AAGATGCTCGTGGCTGTCAAGGCACTGAAGGAGGCATCCGAGAATGCTCGGCAGGACTTTCAGCGTGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | CAGGGATGGCAGATCTCCAAATTTCTTCACGGTGGCTaGCCCTTCCAGCTCTGTGAGGATCCAGTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QGWQISKFLHGG*PFQLCEDPVSL Trigger: CAGGCTGACTGGATCCTCACAGAGCTGGAAGGGGCAGCCACCGTGAAGAAATTTGGAGATCTGCCATCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | CAGGTATCACTGAAGTACTGTGGGTTCTCCATGATGTaGCCCTGGAGTCCGGAGCCTTTGCCCTCAGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: QVSLKYCGFSMM*PWSPEPLPSVG Trigger: CCCTACTGAGGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGAGAACCCACAGTACTTCAGTGATACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CAA 90 bp | AAGTACTGTGGGTTCTCCATGATGTGGCCCTGGAGTCCGGAGCCTTaGCCCTCAGTAGGGGAAAGAGAACTGCCACCCAGTGTCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: KYCGFSMMWPWSPEP*PSVGERELPPSVMK Trigger: CTTCATGACACTGGGTGGCAGTTCTCTTTCCCCTACTGAGGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGAGAACCCACAGTACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | TGGGCATCTGGATCTTCACTGTGGGTACACCACAACTaGTGTTGTGTCCCAGTGGGAGGAACTGGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: WASGSSLWVHHN*CCVPVGGTGLQ Trigger: CTGGAGACCAGTTCCTCCCACTGGGACACAACACCAGTTGTGGTGTACCCACAGTGAAGATCCAGATGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | TCACTGAAGTACTGTGGGTTCTCCATGATGTGGCCCTaGAGTCCGGAGCCTTTGCCCTCAGTAGGGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SLKYCGFSMMWP*SPEPLPSVGER Trigger: TCTTTCCCCTACTGAGGGCAAAGGCTCCGGACTCCAGGGCCACATCATGGAGAACCCACAGTACTTCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CAA 72 bp | ATCTGGATCTTCACTGTGGGTACACCACAACTGGTGTaGTGTCCCAGTGGGAGGAACTGGTCTCCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: IWIFTVGTPQLV*CPSGRNWSPGP Trigger: TGGGCCTGGAGACCAGTTCCTCCCACTGGGACACAACACCAGTTGTGGTGTACCCACAGTGAAGATCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | TTGGACAGAGACCTCGGCCCGGCCCACATCATTCTCTaGCCAGCACGTCACATTCTTCTTGTTGAGATCACT | + |
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Preference number: 6 (lower is better) Translates to: LDRDLGPAHIIL*PARHILLVEIT Trigger: AGTGATCTCAACAAGAAGAATGTGACGTGCTGGGCAGAGAATGATGTGGGCCGGGCCGAGGTCTCTGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS GCA 72 bp | GGGTTTCATCTTTCTTCTCCACTGGGTCTCTTGATGTaGTGTTACCGTCCACTGGCGAGAAGGAGACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GFHLSSPLGLLM*CYRPLARRRQG Trigger: TCCCTGTCTCCTTCTCGCCAGTGGACGGTAACAGCACATCAAGAGACCCAGTGGAGAAGAAAGATGAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CCA 72 bp | ACGTCATCGCCCACTTCCACAGAGTCATTGGGCATCTaGATCTTCACTGTGGGTACACCACAACTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: TSSPTSTESLGI*IFTVGTPQLVL Trigger: CAACACCAGTTGTGGTGTACCCACAGTGAAGATCCAGATGCCCAATGACTCTGTGGAAGTGGGCGATGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS TCA 72 bp | AAAAGGGGTTTCATCTTTCTTCTCCACTGGGTCTCTTaGTGTGCTGTTACCGTCCACTGGCGAGAAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: KRGFIFLLHWVS*CAVTVHWREGD Trigger: GTCTCCTTCTCGCCAGTGGACGGTAACAGCACATCAAGAGACCCAGTGGAGAAGAAAGATGAAACCCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CAA 72 bp | CAAAAGGGGTTTCATCTTTCTTCTCCACTGGGTCTCTaGATGTGCTGTTACCGTCCACTGGCGAGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: QKGFHLSSPLGL*MCCYRPLARRR Trigger: TCTCCTTCTCGCCAGTGGACGGTAACAGCACATCAAGAGACCCAGTGGAGAAGAAAGATGAAACCCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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| CDS CAA 90 bp | TCTGCCCAGCACGTCACATTCTTCTTGTTGAGATCACTGGTGACATaGACCAGAATCAGCCCCAGGGATGGCAGATCTCCAAATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAQHVTFFLLRSLVT*TRISPRDGRSPNFF Trigger: GAAGAAATTTGGAGATCTGCCATCCCTGGGGCTGATTCTGGTCAATGTCACCAGTGATCTCAACAAGAAGAATGTGACGTGCTGGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029712.5 |
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