Pregenerated sensors for NTPCR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031851Ensembl transcript IDs: ENSMUST00000034313.13, ENSMUST00000065135.12, ENSMUST00000143504.8, ENSMUST00000152189.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCCATCACTGCTTGGAGGCATGAGGACAGAGCACGGCCCTTCCTaGGGGGATGTGAACCAATGTCTACATAGCCCGGAATATCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: PPSLLGGMRTEHGPS*GDVNQCLHSPEYQA Trigger: TGCCTGATATTCCGGGCTATGTAGACATTGGTTCACATCCCCCCAGGAAGGGCCGTGCTCTGTCCTCATGCCTCCAAGCAGTGATGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR TCA 90 bp | CTACTGAGCATGTGTGAAGTGCTCAGCGCCAGCAGAAGTGCAGCCTaGCAAACTATTTCCCATAGTGGGTGCCATGATACATGGTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LLSMCEVLSASRSAA*QTISHSGCHDTWSP Trigger: TGGGGACCATGTATCATGGCACCCACTATGGGAAATAGTTTGTCAGGCTGCACTTCTGCTGGCGCTGAGCACTTCACACATGCTCAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCACCTGGACAGGACACGGTGGACTaGCTGGGTGCTGCTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: KRTSCFCFQLHQCGAAPGQDTVD*LGAAQG Trigger: GCCCTGAGCAGCACCCAGTCAGTCCACCGTGTCCTG...TCCAGGTGCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| 3UTR-3UTR GCA 90 bp | AACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGGACACGGTGGACTGACTGGTGGACTGACTGGGTaGTGCTCAGGGCCCACCGTG | + |
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Preference number: 2 (lower is better) Translates to: NRKRKYKSGAHTGHGGLTGGLTG*CSGPTV Trigger: CACGGTGGGCCCTGAGCAGCACCCAGTCAGTCCACC...AGTCAGTCCACCGTGTCCTGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACACAGAGGACGGTGGACTaGCTGGGTGCTGCTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: YSNRMHNRKRKYKSGAHTQRTVD*LGAAQG Trigger: GCCCTGAGCAGCACCCAGTCAGTCCACCGTCCTCTG...TGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| 3UTR-3UTR CCA 90 bp | AACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGGACACGGTGGACTGACTGTGAGCAGAGGACGGTaGACTGACTGGGTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: NRKRKYKSGAHTGHGGLTVSRGR*TDWVLL Trigger: GAGCAGCACCCAGTCAGTCCACCGTCCTCTGCTCAC...AGTCAGTCCACCGTGTCCTGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| 3UTR CAA 90 bp | AACCGTTTCTATGTCCTTTTCCCATTAGAAACAAGAGGCAAGTTGTaGACCCAGCCAGCGAGCACACGGGAGCACGGGCTCTTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NRFYVLFPLETRGKL*TQPASTREHGLLPL Trigger: AAGAGGCAAGAGCCCGTGCTCCCGTGTGCTCGCTGGCTGGGTCAACAACTTGCCTCTTGTTTCTAATGGGAAAAGGACATAGAAACGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR CAA 90 bp | ATGAACCGTTTCTATGTCCTTTTCCCATTAGAAACAAGAGGCAAGTaGTTGACCCAGCCAGCGAGCACACGGGAGCACGGGCTCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: MNRFYVLFPLETRGK*LTQPASTREHGLLP Trigger: AGGCAAGAGCCCGTGCTCCCGTGTGCTCGCTGGCTGGGTCAACAACTTGCCTCTTGTTTCTAATGGGAAAAGGACATAGAAACGGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR-3UTR CCA 90 bp | ATAATTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCGTGAGCAGAGGACGGTaGACTGACTGGGTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: IIEENQLFLLSAAPVWSCVSRGR*TDWVLL Trigger: GAGCAGCACCCAGTCAGTCCACCGTCCTCTGCTCAC...GCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAATTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCCTTTGGAAATAATTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACAGAGGACGGTGGACTaGCTGGGTGCTGCTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: FPPLEIIEENQLFLLSAAQRTVD*LGAAQG Trigger: GCCCTGAGCAGCACCCAGTCAGTCCACCGTCCTCTG...TGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAATTATTTCCAAAGGAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAATTTACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAGGTGGACTGACTGGGTaGTGCTCAGGGCCCACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: FRIYSNRMHNRKRKYKSGGGLTG*CSGPTV Trigger: CACGGTGGGCCCTGAGCAGCACCCAGTCAGTCCACC...TCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTAAATTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAAGGTGGTTCACAACTGTCTGTAGTTCTAATTGCAGGGGACTAGATGCCCAGCGCCAGCAGAAGTaGAGCCTGACAAACTATTTC | + |
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Preference number: 2 (lower is better) Translates to: RTRWFTTVCSSNCRGLDAQRQQK*SLTNYF Trigger: GAAATAGTTTGTCAGGCTGCACTTCTGCTGGCGCTG...GGCATCTAGTCCCCTGCAATTAGAACTACAGACAGTTGTGAACCACCTTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR-3UTR CCA 90 bp | GTATTTCTATTATCCCTTAATGCAAACCAGAGGACATTTCTACTGAGCATGTGTGGTCCCCAGGAGCCCTaGGCAGCCACCAAGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VFLLSLNANQRTFLLSMCGPQEP*AATKPS Trigger: AGAAGGCTTGGTGGCTGCCCAGGGCTCCTGGGGACC...ACACATGCTCAGTAGAAATGTCCTCTGGTTTGCATTAAGGGATAATAGAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR-3UTR TCA 90 bp | ATAATTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCAAGTCAAGGAAGAAGTaGACCCCCGTCTTTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: IIEENQLFLLSAAPVWSCKSRKK*TPVFPQ Trigger: CTGAGGAAAGACGGGGGTTCACTTCTTCCTTGACTT...GCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAATTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| 3UTR-3UTR TCA 90 bp | AGGACAAGGTGGTTCACAACTGTCTGTAGTTCTAATTGCAGGGGACTAGATGCCAGCAGAAGTGCAGCCTaGCAAACTATTTCCCATAGT | + |
|
Preference number: 2 (lower is better) Translates to: RTRWFTTVCSSNCRGLDASRSAA*QTISHS Trigger: ACTATGGGAAATAGTTTGTCAGGCTGCACTTCTGCT...GGCATCTAGTCCCCTGCAATTAGAACTACAGACAGTTGTGAACCACCTTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR CCA 72 bp | CTGCTTGGAGGCATGAGGACAGAGCACGGCCCTTCCTaGGGGGATGTGAACCAATGTCTACATAGCCCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLGGMRTEHGPS*GDVNQCLHSPE Trigger: TTCCGGGCTATGTAGACATTGGTTCACATCCCCCCAGGAAGGGCCGTGCTCTGTCCTCATGCCTCCAAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR GCA 72 bp | GACTGGGGAGGTAGCTCAGCAGCTAAGGACATTGGATaGTCTCTCAGAGGGCCTGTGTTTCCCAGGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DWGGSSAAKDIG*SLRGPVFPRTR Trigger: CCTTGTCCTGGGAAACACAGGCCCTCTGAGAGAGCATCCAATGTCCTTAGCTGCTGAGCTACCTCCCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR CCA 72 bp | TGCTCTCTCAGAGGGCCTGTGTTTCCCAGGACAAGGTaGTTCACAACTGTCTGTAGTTCTAATTGCAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: CSLRGPVFPRTR*FTTVCSSNCRG Trigger: TCCCCTGCAATTAGAACTACAGACAGTTGTGAACCACCTTGTCCTGGGAAACACAGGCCCTCTGAGAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR TCA 72 bp | ATGTGTGAAGTGCTCAGCGCCAGCAGAAGTGCAGCCTaGCAAACTATTTCCCATAGTGGGTGCCATGATACA | + |
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Preference number: 3 (lower is better) Translates to: MCEVLSASRSAA*QTISHSGCHDT Trigger: TGTATCATGGCACCCACTATGGGAAATAGTTTGTCAGGCTGCACTTCTGCTGGCGCTGAGCACTTCACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR-3UTR CAA 90 bp | AGAAACATGGGTGACTGTAAAGCTATGAACCGTTTCTATGTCCTTTTCCCATTACGGGAGCACGGGCTCTaGCCTCTTCCCAGGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RNMGDCKAMNRFYVLFPLREHGL*PLPRIL Trigger: CAGAATCCTGGGAAGAGGCAAGAGCCCGTGCTCCCG...TAATGGGAAAAGGACATAGAAACGGTTCATAGCTTTACAGTCACCCATGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR CCA 72 bp | TATACACTCCGGTGGGAGCGAATTCCGCCTAATGTTTaGCAGACTCGTTTTAGAATTTACTCAAACCGCATG | + |
|
Preference number: 3 (lower is better) Translates to: YTLRWERIPPNV*QTRFRIYSNRM Trigger: CATGCGGTTTGAGTAAATTCTAAAACGAGTCTGCCAAACATTAGGCGGAATTCGCTCCCACCGGAGTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| 3UTR-3UTR CAA 90 bp | GTATTTCTATTATCCCTTAATGCAAACCAGAGGACATTTCTACTGAGCATGTGTGAAACAAGAGGCAAGTaGTTGACCCAGCCAGCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFLLSLNANQRTFLLSMCETRGK*LTQPAS Trigger: GCTCGCTGGCTGGGTCAACAACTTGCCTCTTGTTTC...ACACATGCTCAGTAGAAATGTCCTCTGGTTTGCATTAAGGGATAATAGAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR TCA 72 bp | GTCGTGATTATTTCACCCAAGTCCAGTTTGACGGCCTaGGTCTATGGCTGTAATCATTACAGAAACATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VVIISPKSSLTA*VYGCNHYRNMG Trigger: ACCCATGTTTCTGTAATGATTACAGCCATAGACTCAGGCCGTCAAACTGGACTTGGGTGAAATAATCACGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| 3UTR GCA 72 bp | TTTGGCAGACTCGTTTTAGAATTTACTCAAACCGCATaGACAACCGTAAGAGGAAATACAAGTCTGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: FGRLVLEFTQTA*TTVRGNTSLEL Trigger: GAGCTCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTAAATTCTAAAACGAGTCTGCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGCGAGCACACGGGAGCACGGGCTCTTGCCTCTTCCCAGGATTCTGTTCTGGACAGAGGCCCCTaGGCACCAGACAGGGTGACG | + |
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Preference number: 4 (lower is better) Translates to: PASEHTGARALASSQDSVLDRGP*APDRVT Trigger: CGTCACCCTGTCTGGTGCCCAGGGGCCTCTGTCCAG...AACAGAATCCTGGGAAGAGGCAAGAGCCCGTGCTCCCGTGTGCTCGCTGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CCA 90 bp | GGGTGCTGCTCAGGGCCCACCGTGAGCAGAGGCAGAGCTGGACCCAACAGCGCTTACACACTCTGTGTTTaGGGCCACAGCTGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GCCSGPTVSRGRAGPNSAYTLCV*GHSWSL Trigger: CAGGCTCCAGCTGTGGCCCCAAACACAGAGTGTGTA...AGCGCTGTTGGGTCCAGCTCTGCCTCTGCTCACGGTGGGCCCTGAGCAGCACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR GCA 90 bp | CAGCCAGCGAGCACACGGGAGCACGGGCTCTTGCCTCTTCCCAGGATTCTGTTTGGCAGCCCGGAGGACTaGAGGACCTCGATGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: QPASTREHGLLPLPRILFGSPED*RTSMAF Trigger: GAAAGCCATCGAGGTCCTGCAGTCCTCCGGGCTGCC...AAACAGAATCCTGGGAAGAGGCAAGAGCCCGTGCTCCCGTGTGCTCGCTGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGCTCAGGGCCCACCGTGAGCAGAGGCAGAGCTGGACCCAACAGCGCTGCATCTGGCGGACCGCTTaGATGAAAGGTTGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VLLRAHREQRQSWTQQRCIWRTA*MKGWLK Trigger: CTTCAGCCAACCTTTCATCCAAGCGGTCCGCCAGAT...GCAGCGCTGTTGGGTCCAGCTCTGCCTCTGCTCACGGTGGGCCCTGAGCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR TCA 90 bp | GTGCTGCTCAGGGCCCACCGTGAGCAGAGGCAGAGCTGGACCCAACAGCGCTGCTCCCGATCTCGTCAATaGTACACACTCTGTGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VLLRAHREQRQSWTQQRCSRSRQ*YTLCVW Trigger: CCAAACACAGAGTGTGTATCATTGACGAGATCGGGA...GCAGCGCTGTTGGGTCCAGCTCTGCCTCTGCTCACGGTGGGCCCTGAGCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR CCA 90 bp | AAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCACCTGGACTGGACAGAGGCCCCTaGGCACCAGACAGGGTGACG | + |
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Preference number: 4 (lower is better) Translates to: KRTSCFCFQLHQCGAAPGLDRGP*APDRVT Trigger: CGTCACCCTGTCTGGTGCCCAGGGGCCTCTGTCCAG...TCCAGGTGCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR GCA 90 bp | CACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGGACACGGTGGACTGGGCAGCCCGGAGGACTaGAGGACCTCGATGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: HNRKRKYKSGAHTGHGGLGSPED*RTSMAF Trigger: GAAAGCCATCGAGGTCCTGCAGTCCTCCGGGCTGCC...CAGTCCACCGTGTCCTGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| 3UTR CAA 72 bp | GCTAGGACTGGGGAGGTAGCTCAGCAGCTAAGGACATaGGATGCTCTCTCAGAGGGCCTGTGTTTCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ARTGEVAQQLRT*DALSEGLCFPG Trigger: TCCTGGGAAACACAGGCCCTCTGAGAGAGCATCCAATGTCCTTAGCTGCTGAGCTACCTCCCCAGTCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CCA 90 bp | TTAGAAACAAGAGGCAAGTTGTTGACCCAGCCAGCGAGCACACGGGAGCACGGGACTGCAGGACCTCGATaGCTTTCTGGATCAAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LETRGKLLTQPASTREHGTAGPR*LSGSRL Trigger: CAACCTTGATCCAGAAAGCCATCGAGGTCCTGCAGT...CCCGTGCTCCCGTGTGCTCGCTGGCTGGGTCAACAACTTGCCTCTTGTTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CCA 90 bp | TTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCACCTTTCCACCAGGGCCAGTaGCTTCCCTTTGGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LKRTSCFCFQLHQCGAAPFHQGQ*LPFGDW Trigger: CCAGTCCCCAAAGGGAAGCCACTGGCCCTGGTGGAA...AGGTGCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| 3UTR CAA 72 bp | TATGTCCTTTTCCCATTAGAAACAAGAGGCAAGTTGTaGACCCAGCCAGCGAGCACACGGGAGCACGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: YVLFPLETRGKL*TQPASTREHGL Trigger: GAGCCCGTGCTCCCGTGTGCTCGCTGGCTGGGTCAACAACTTGCCTCTTGTTTCTAATGGGAAAAGGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CCA 90 bp | TACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGCTGTGACCCAACTCTaGACAGAGGCCCCTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: YSNRMHNRKRKYKSGAHTAVTQL*TEAPGH Trigger: GTGCCCAGGGGCCTCTGTCCAGAGTTGGGTCACAGC...TGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| 3UTR CAA 72 bp | TTCTATGTCCTTTTCCCATTAGAAACAAGAGGCAAGTaGTTGACCCAGCCAGCGAGCACACGGGAGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: FYVLFPLETRGK*LTQPASTREHG Trigger: CCCGTGCTCCCGTGTGCTCGCTGGCTGGGTCAACAACTTGCCTCTTGTTTCTAATGGGAAAAGGACATAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CCA 90 bp | TTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCACCTTACACACTCTGTGTTTaGGGCCACAGCTGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LKRTSCFCFQLHQCGAAPYTLCV*GHSWSL Trigger: CAGGCTCCAGCTGTGGCCCCAAACACAGAGTGTGTA...AGGTGCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR CCA 90 bp | CACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGGACACGGTGGACTGCTTCCCTTTGGGGACTaGGATAGTGCCAACCACGAT | + |
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Preference number: 4 (lower is better) Translates to: HNRKRKYKSGAHTGHGGLLPFGD*DSANHD Trigger: ATCGTGGTTGGCACTATCCCAGTCCCCAAAGGGAAG...CAGTCCACCGTGTCCTGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR CCA 90 bp | TACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACATTCCACCAGGGCCAGTaGCTTCCCTTTGGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: YSNRMHNRKRKYKSGAHTFHQGQ*LPFGDW Trigger: CCAGTCCCCAAAGGGAAGCCACTGGCCCTGGTGGAA...TGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR CCA 90 bp | AACCGTTTCTATGTCCTTTTCCCATTAGAAACAAGAGGCAAGTTGTTGACCCAGGCTGTGACCCAACTCTaGACAGAGGCCCCTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NRFYVLFPLETRGKLLTQAVTQL*TEAPGH Trigger: GTGCCCAGGGGCCTCTGTCCAGAGTTGGGTCACAGC...CTGGGTCAACAACTTGCCTCTTGTTTCTAATGGGAAAAGGACATAGAAACGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR TCA 90 bp | CAGCTAAGGACATTGGATGCTCTCTCAGAGGGCCTGTGTTTCCCAGGACAAGGTTCTTCCCTTCCTGCCTaGCTTCTTGTGTGTAAAATC | + |
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Preference number: 4 (lower is better) Translates to: QLRTLDALSEGLCFPGQGSSLPA*LLVCKI Trigger: GATTTTACACACAAGAAGTCAGGCAGGAAGGGAAGA...ACCTTGTCCTGGGAAACACAGGCCCTCTGAGAGAGCATCCAATGTCCTTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR TCA 90 bp | CACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGGACACGGTGGACTGTCCCGATCTCGTCAATaGTACACACTCTGTGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: HNRKRKYKSGAHTGHGGLSRSRQ*YTLCVW Trigger: CCAAACACAGAGTGTGTATCATTGACGAGATCGGGA...CAGTCCACCGTGTCCTGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR TCA 90 bp | TACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACACGTCACGCCTTTTCCTaGTTTCTTCCACCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: YSNRMHNRKRKYKSGAHTRHAFS*FLPPGP Trigger: TGGCCCTGGTGGAAGAAATCAGGAAAAGGCGTGACG...TGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR GCA 90 bp | GAGGTGTTTAATATCTACAGCACTCAAAGTCAAGGAAGAAGTGAACCCCCGTCTGGATCAAGGTTGTTTTaGCAACCCCTGGAGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: EVFNIYSTQSQGRSEPPSGSRLF*QPLEAR Trigger: CCGGGCCTCCAGGGGTTGGCAAAACAACCTTGATCC...AGACGGGGGTTCACTTCTTCCTTGACTTTGAGTGCTGTAGATATTAAACACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR CCA 90 bp | TTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCACCTACTGCAGGACCTCGATaGCTTTCTGGATCAAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LKRTSCFCFQLHQCGAAPTAGPR*LSGSRL Trigger: CAACCTTGATCCAGAAAGCCATCGAGGTCCTGCAGT...AGGTGCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR CCA 90 bp | AACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGGACACGGTGGACTGACTACTGCAGGACCTCGATaGCTTTCTGGATCAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NRKRKYKSGAHTGHGGLTTAGPR*LSGSRL Trigger: CAACCTTGATCCAGAAAGCCATCGAGGTCCTGCAGT...AGTCAGTCCACCGTGTCCTGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR TCA 90 bp | AAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCACCTGGATCTTCCCTTCCTGCCTaGCTTCTTGTGTGTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: KRTSCFCFQLHQCGAAPGSSLPA*LLVCKI Trigger: GATTTTACACACAAGAAGTCAGGCAGGAAGGGAAGA...TCCAGGTGCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR GCA 90 bp | TTTAGAATTTACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAGGCAGCCCGGAGGACTaGAGGACCTCGATGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRIYSNRMHNRKRKYKSGGSPED*RTSMAF Trigger: GAAAGCCATCGAGGTCCTGCAGTCCTCCGGGCTGCC...TCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTAAATTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR CCA 90 bp | GTGGAGCTGCACCTGGAGAGGTGTTTAATATCTACAGCACTCAAAGTCAAGGAAATCTGGCGGACCGCTTaGATGAAAGGTTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VELHLERCLISTALKVKEIWRTA*MKGWLK Trigger: CTTCAGCCAACCTTTCATCCAAGCGGTCCGCCAGAT...TTCCTTGACTTTGAGTGCTGTAGATATTAAACACCTCTCCAGGTGCAGCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR TCA 90 bp | TTTCCTCCTTTGGAAATAATTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACGTCACGCCTTTTCCTaGTTTCTTCCACCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIIEENQLFLLSAARHAFS*FLPPGP Trigger: TGGCCCTGGTGGAAGAAATCAGGAAAAGGCGTGACG...TGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAATTATTTCCAAAGGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR GCA 90 bp | GTATTTCTATTATCCCTTAATGCAAACCAGAGGACATTTCTACTGAGCATGTGTGGATCAAGGTTGTTTTaGCAACCCCTGGAGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLSLNANQRTFLLSMCGSRLF*QPLEAR Trigger: CCGGGCCTCCAGGGGTTGGCAAAACAACCTTGATCC...ACACATGCTCAGTAGAAATGTCCTCTGGTTTGCATTAAGGGATAATAGAAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCTTTGGAAATAATTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACTTCCCTTTGGGGACTaGGATAGTGCCAACCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIIEENQLFLLSAALPFGD*DSANHD Trigger: ATCGTGGTTGGCACTATCCCAGTCCCCAAAGGGAAG...TGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAATTATTTCCAAAGGAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR GCA 90 bp | AACCGTTTCTATGTCCTTTTCCCATTAGAAACAAGAGGCAAGTTGTTGACCCAGACAGGAAGTGCCAACTaGTCAAAAGAATCCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRFYVLFPLETRGKLLTQTGSAN*SKESKF Trigger: GAACTTGGATTCTTTTGAGCAGTTGGCACTTCCTGT...CTGGGTCAACAACTTGCCTCTTGTTTCTAATGGGAAAAGGACATAGAAACGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR TCA 90 bp | TTTAGAATTTACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGATCTTCCCTTCCTGCCTaGCTTCTTGTGTGTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FRIYSNRMHNRKRKYKSGSSLPA*LLVCKI Trigger: GATTTTACACACAAGAAGTCAGGCAGGAAGGGAAGA...TCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTAAATTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR GCA 90 bp | TTAGAATTTACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAGACAGGAAGTGCCAACTaGTCAAAAGAATCCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEFTQTACTTVRGNTSLETGSAN*SKESKF Trigger: GAACTTGGATTCTTTTGAGCAGTTGGCACTTCCTGT...CTCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTAAATTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR GCA 90 bp | TTTAGAATTTACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGAACAGGAAGTGCCAACTaGTCAAAAGAATCCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRIYSNRMHNRKRKYKSGTGSAN*SKESKF Trigger: GAACTTGGATTCTTTTGAGCAGTTGGCACTTCCTGT...TCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTAAATTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR CAA 90 bp | GGGTGCTGCTCAGGGCCCACCGTGAGCAGAGGCAGAGCTGGACCCAACAGCGCTTGGATCAAGGTTGTTTaGCCAACCCCTGGAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GCCSGPTVSRGRAGPNSAWIKVV*PTPGGP Trigger: CGGGCCTCCAGGGGTTGGCAAAACAACCTTGATCCA...AGCGCTGTTGGGTCCAGCTCTGCCTCTGCTCACGGTGGGCCCTGAGCAGCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS GCA 90 bp | CTCGTCAATGATACACACTCTGTGTTTGGGGCCACAGCTGGAGCCTaGCCAACTCTGGACAGAGGCCCCTGGGCACCAGACAGGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LVNDTHSVFGATAGA*PTLDRGPWAPDRVT Trigger: CGTCACCCTGTCTGGTGCCCAGGGGCCTCTGTCCAGAGTTGGGCAGGCTCCAGCTGTGGCCCCAAACACAGAGTGTGTATCATTGACGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143504.8 |
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| CDS CCA 90 bp | GGCTTTCCAGGTAGAGGCTGTGACCCAACTCTGGACAGAGGCCCCTaGGCACCAGACAGGGTGACGACATCGAATCCTATCCTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GFPGRGCDPTLDRGP*APDRVTTSNPILFP Trigger: AGGGAAGAGGATAGGATTCGATGTCGTCACCCTGTCTGGTGCCCAGGGGCCTCTGTCCAGAGTTGGGTCACAGCCTCTACCTGGAAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000065135.12 ENSMUST00000152189.2 |
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| CDS-3UTR CAA 90 bp | GGGTGCTGCTCAGGGCCCACCGTGAGCAGAGGCAGAGCTGGACCCAACAGCGCTTTCCTGCCTGACTTCTaGTGTGTAAAATCCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GCCSGPTVSRGRAGPNSAFLPDF*CVKSIH Trigger: GTGGATGGATTTTACACACAAGAAGTCAGGCAGGAA...AGCGCTGTTGGGTCCAGCTCTGCCTCTGCTCACGGTGGGCCCTGAGCAGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS CCA 90 bp | TGGCTTCCCTTTGGGGACTGGGATAGTGCCAACCACGATAATGCCTaGTGTGGACAGCATCTGGCGGACCGCTTGGATGAAAGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WLPFGDWDSANHDNA*CGQHLADRLDERLA Trigger: AGCCAACCTTTCATCCAAGCGGTCCGCCAGATGCTGTCCACACCAGGCATTATCGTGGTTGGCACTATCCCAGTCCCCAAAGGGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000143504.8 ENSMUST00000152189.2 |
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| CDS-3UTR CAA 90 bp | CAGCTAAGGACATTGGATGCTCTCTCAGAGGGCCTGTGTTTCCCAGGACAAGGTTGGATCAAGGTTGTTTaGCCAACCCCTGGAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QLRTLDALSEGLCFPGQGWIKVV*PTPGGP Trigger: CGGGCCTCCAGGGGTTGGCAAAACAACCTTGATCCA...ACCTTGTCCTGGGAAACACAGGCCCTCTGAGAGAGCATCCAATGTCCTTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS GCA 90 bp | GGGCCACAGCTGGAGCCTGCGTTTCTTAGGACAGGAAGTGCCAACTaGTCAAAAGAATCCAAGTTCACCACATACTGCCCCACTCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GPQLEPAFLRTGSAN*SKESKFTTYCPTRH Trigger: GTGTCGAGTGGGGCAGTATGTGGTGAACTTGGATTCTTTTGAGCAGTTGGCACTTCCTGTCCTAAGAAACGCAGGCTCCAGCTGTGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS TCA 90 bp | TGCCCAAAGCTGGACTCTCCACTCGGGATGTCATCGGACGCTTCTTaGTGGTTTCTTAGGACAGGAAGTGCCAACTGCTCAAAAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: CPKLDSPLGMSSDAS*WFLRTGSANCSKES Trigger: GGATTCTTTTGAGCAGTTGGCACTTCCTGTCCTAAGAAACCATCAAGAAGCGTCCGATGACATCCCGAGTGGAGAGTCCAGCTTTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS-3UTR CAA 90 bp | TTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGAGCTGCACCTCGCTTGGATGAAAGGTaGGCTGAAGAGCTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKRTSCFCFQLHQCGAAPRLDER*AEELHL Trigger: AAGATGGAGCTCTTCAGCCAACCTTTCATCCAAGCG...AGGTGCAGCTCCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR CAA 90 bp | CACAACCGTAAGAGGAAATACAAGTCTGGAGCTCACACAGGACACGGTGGACTGTGGATCAAGGTTGTTTaGCCAACCCTTCTAATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HNRKRKYKSGAHTGHGGLWIKVV*PTLLMQ Trigger: CTGCATTAGAAGGGTTGGCAAAACAACCTTGATCCA...CAGTCCACCGTGTCCTGTGTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152189.2 |
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| CDS-3UTR CAA 90 bp | TTGGAAATAATTGAAGAGAACCAGTTGTTTCTGCTTTCAGCTGCACCAGTGTGGTTCCTGCCTGACTTCTaGTGTGTAAAATCCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LEIIEENQLFLLSAAPVWFLPDF*CVKSIH Trigger: GTGGATGGATTTTACACACAAGAAGTCAGGCAGGAA...CCACACTGGTGCAGCTGAAAGCAGAAACAACTGGTTCTCTTCAATTATTTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034313.13 |
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| CDS-3UTR CAA 90 bp | TTTAGAATTTACTCAAACCGCATGCACAACCGTAAGAGGAAATACAAGTCTGGACGCTTGGATGAAAGGTaGGCTGAAGAGCTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRIYSNRMHNRKRKYKSGRLDER*AEELHL Trigger: AAGATGGAGCTCTTCAGCCAACCTTTCATCCAAGCG...TCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGTAAATTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000152189.2 |
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| CDS-3UTR CAA 90 bp | GTATTTCTATTATCCCTTAATGCAAACCAGAGGACATTTCTACTGAGCATGTGTTTCCTGCCTGACTTCTaGTGTGTAAAATCCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFLLSLNANQRTFLLSMCFLPDF*CVKSIH Trigger: GTGGATGGATTTTACACACAAGAAGTCAGGCAGGAA...ACACATGCTCAGTAGAAATGTCCTCTGGTTTGCATTAAGGGATAATAGAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065135.12 |
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| CDS CCA 72 bp | GGCAGCCCGGAGGACTGCAGGACCTCGATGGCTTTCTaGATCAAGGTTGTTTTGCCAACCCCTGGAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSPEDCRTSMAF*IKVVLPTPGGP Trigger: CGGGCCTCCAGGGGTTGGCAAAACAACCTTGATCCAGAAAGCCATCGAGGTCCTGCAGTCCTCCGGGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000065135.12 |
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| CDS CCA 72 bp | GGTAGAGGCTGTGACCCAACTCTGGACAGAGGCCCCTaGGCACCAGACAGGGTGACGACATCGAATCCTATC | + |
|
Preference number: 6 (lower is better) Translates to: GRGCDPTLDRGP*APDRVTTSNPI Trigger: GATAGGATTCGATGTCGTCACCCTGTCTGGTGCCCAGGGGCCTCTGTCCAGAGTTGGGTCACAGCCTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000065135.12 ENSMUST00000152189.2 |
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| CDS CCA 72 bp | CATCCACGGGCAGCCCGGAGGACTGCAGGACCTCGATaGCTTTCTGGATCAAGGTTGTTTTGCCAACCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HPRAARRTAGPR*LSGSRLFCQPH Trigger: ATGGGGTTGGCAAAACAACCTTGATCCAGAAAGCCATCGAGGTCCTGCAGTCCTCCGGGCTGCCCGTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143504.8 |
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| CDS CCA 72 bp | CATCCACGGGCAGCCCGGAGGACTGCAGGACCTCGATaGCTTTCTGGATCAAGGTTGTTTTGCCAACCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HPRAARRTAGPR*LSGSRLFCQPF Trigger: GAAGGGTTGGCAAAACAACCTTGATCCAGAAAGCCATCGAGGTCCTGCAGTCCTCCGGGCTGCCCGTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152189.2 |
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| CDS CAA 72 bp | TGCAGGACCTCGATGGCTTTCTGGATCAAGGTTGTTTaGCCAACCCCTGGAGGCCCGGTGAGGAACACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CRTSMAFWIKVV*PTPGGPVRNTC Trigger: GCACGTGTTCCTCACCGGGCCTCCAGGGGTTGGCAAAACAACCTTGATCCAGAAAGCCATCGAGGTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034313.13 ENSMUST00000065135.12 |
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| CDS CAA 90 bp | GCCAACCACGATAATGCCTGGTGTGGACAGCATCTGGCGGACCGCTaGGATGAAAGGTTGGCTGAAGAGCTCCATCTTCCCGATCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ANHDNAWCGQHLADR*DERLAEELHLPDLV Trigger: GACGAGATCGGGAAGATGGAGCTCTTCAGCCAACCTTTCATCCAAGCGGTCCGCCAGATGCTGTCCACACCAGGCATTATCGTGGTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000143504.8 ENSMUST00000152189.2 |
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| CDS CAA 90 bp | AAGAGCTCCATCTTCCCGATCTCGTCAATGATACACACTCTGTGTTaGGGGCCACAGCTGGAGCCTGCCCAACTCTGGACAGAGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KSSIFPISSMIHTLC*GPQLEPAQLWTEAP Trigger: AGGGGCCTCTGTCCAGAGTTGGGCAGGCTCCAGCTGTGGCCCCAAACACAGAGTGTGTATCATTGACGAGATCGGGAAGATGGAGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143504.8 |
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| CDS CCA 72 bp | GTGCCAACCACGATAATGCCTGGTGTGGACAGCATCTaGCGGACCGCTTGGATGAAAGGTTGGCTGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPTTIMPGVDSI*RTAWMKGWLKS Trigger: GCTCTTCAGCCAACCTTTCATCCAAGCGGTCCGCCAGATGCTGTCCACACCAGGCATTATCGTGGTTGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000143504.8 ENSMUST00000152189.2 |
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| CDS CCA 72 bp | TTCTTCCACCAGGGCCAGTGGCTTCCCTTTGGGGACTaGGATAGTGCCAACCACGATAATGCCTGGTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FFHQGQWLPFGD*DSANHDNAWCG Trigger: TCCACACCAGGCATTATCGTGGTTGGCACTATCCCAGTCCCCAAAGGGAAGCCACTGGCCCTGGTGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000143504.8 ENSMUST00000152189.2 |
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| CDS CCA 72 bp | TTTGGGGACTGGGATAGTGCCAACCACGATAATGCCTaGTGTGGACAGCATCTGGCGGACCGCTTGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: FGDWDSANHDNA*CGQHLADRLDE Trigger: TTCATCCAAGCGGTCCGCCAGATGCTGTCCACACCAGGCATTATCGTGGTTGGCACTATCCCAGTCCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000143504.8 ENSMUST00000152189.2 |
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| CDS CAA 72 bp | ACGACGGCCACAATATCTGGCAAGAGGCTGTTTCTGTaGTCCCTGGTGACATTGAACACCTTCACGTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: TTATISGKRLFL*SLVTLNTFTSR Trigger: GCGTGACGTGAAGGTGTTCAATGTCACCAGGGACAACAGAAACAGCCTCTTGCCAGATATTGTGGCCGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000143504.8 ENSMUST00000152189.2 |
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| CDS CAA 90 bp | GCCACAATATCTGGCAAGAGGCTGTTTCTGTTGTCCCTGGTGACATaGAACACCTTCACGTCACGCCTTTTCCTGATTTCTTCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATISGKRLFLLSLVT*NTFTSRLFLISSTR Trigger: CCTGGTGGAAGAAATCAGGAAAAGGCGTGACGTGAAGGTGTTCAATGTCACCAGGGACAACAGAAACAGCCTCTTGCCAGATATTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034313.13 ENSMUST00000143504.8 ENSMUST00000152189.2 |
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