Pregenerated sensors for NTNG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035513Ensembl transcript IDs: ENSMUST00000048455.9, ENSMUST00000071201.5, ENSMUST00000091153.9, ENSMUST00000102873.8, ENSMUST00000177689.8, ENSMUST00000183583.8
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGCGGGCAGAGCAGGGAGGGCGGGAGGACTCTGCGAGTAGCACCTaGGAGCAGCTCGGCCGCACCCGTGTCGCCGCCGGGCCAGGGACC | + |
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Preference number: 1 (lower is better) Translates to: ARAEQGGREDSASST*EQLGRTRVAAGPGT Trigger: GGTCCCTGGCCCGGCGGCGACACGGGTGCGGCCGAGCTGCTCCCAGGTGCTACTCGCAGAGTCCTCCCGCCCTCCCTGCTCTGCCCGCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | CGAGCAGCAGCAGGCATCCGAGCAGGGTGTCGGGGCGCGGGACGATaGCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGCGAGGT | + |
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Preference number: 1 (lower is better) Translates to: RAAAGIRAGCRGAGR*LARGHSPGQRRRRG Trigger: ACCTCGCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCGGATGCCTGCTGCTGCTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR CCA 90 bp | CTGAAATTCGAAGTCCGCCGGGTCAGGGCTCCACAGCGCCCCCTGTaGCCGGCGAGGGCAGTGCCGGGCGGGGCTGGTGAGCGCGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LKFEVRRVRAPQRPL*PARAVPGGAGERGQ Trigger: CTGCCCGCGCTCACCAGCCCCGCCCGGCACTGCCCTCGCCGGCCACAGGGGGCGCTGTGGAGCCCTGACCCGGCGGACTTCGAATTTCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR CCA 90 bp | CAGCAGCAGGCATCCGAGCAGGGTGTCGGGGCGCGGGACGATGCCTaGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGCGAGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: QQQASEQGVGARDDA*RAVTVRASVVGEVT Trigger: TGTGACCTCGCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCGGATGCCTGCTGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | GGCCAGCGTCGTCGGCGAGGTCACAGCGGGGCTGCTCACAGCGAATaGCGGTGTAGCCGGGCGGGCAGGCGCAGCGTTGGTTCTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GQRRRRGHSGAAHSE*RCSRAGRRSVGSAG Trigger: GCCAGCAGAACCAACGCTGCGCCTGCCCGCCCGGCTACACCGGCATTCGCTGTGAGCAGCCCCGCTGTGACCTCGCCGACGACGCTGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | CGGTGTAGCCGGGCGGGCAGGCGCAGCGTTGGTTCTGCTGGCAGGTaGCGCCATTCTGGCAGAGCAGCTGGTCATCGTCGCACACATTGG | + |
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Preference number: 1 (lower is better) Translates to: RCSRAGRRSVGSAGR*RHSGRAAGHRRTHW Trigger: CCAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCACCTGCCAGCAGAACCAACGCTGCGCCTGCCCGCCCGGCTACACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | GCGCCAGTAGTGTGTAGGAAGGCAGTCGTCGCACTTGGGCCCCACTaGGCCCTCCCTGCACTCGCAGAAGCCTGTCTCATTGCATCGATC | + |
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Preference number: 1 (lower is better) Translates to: APVVCRKAVVALGPH*ALPALAEACLIASI Trigger: GATCGATGCAATGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGACTGCCTTCCTACACACTACTGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | TGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCATTaGATCGATCGTGCACAGAGCCGATCTGGTTACAGTTACATTCAA | + |
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Preference number: 1 (lower is better) Translates to: WAPLRPPCTRRSLSH*IDRAQSRSGYSYIQ Trigger: TTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | TACATTCAATGCAGACGTTCTCATCATCCAGCTCTGCGGAGCCATTaGGATAGTAGCCCAGGCGGCAGTGCTGACAGTGTTGGCCTCGAG | + |
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Preference number: 1 (lower is better) Translates to: YIQCRRSHHPALRSH*DSSPGGSADSVGLE Trigger: CTCGAGGCCAACACTGTCAGCACTGCCGCCTGGGCTACTATCGCAATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGCATTGAATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | GCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCATTGCATCGATCGTaGACAGAGCCGATCTGGTTACAGTTACATTCAATGCAGACGTTC | + |
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Preference number: 1 (lower is better) Translates to: APSLHSQKPVSLHRS*TEPIWLQLHSMQTF Trigger: GAACGTCTGCATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 90 bp | TGCATCGATCGTGCACAGAGCCGATCTGGTTACAGTTACATTCAATaGAGACGTTCTCATCATCCAGCTCTGCGGAGCCATTGCGATAGT | + |
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Preference number: 1 (lower is better) Translates to: CIDRAQSRSGYSYIQ*RRSHHPALRSHCDS Trigger: ACTATCGCAATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGCATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGCGAGCACTTGGGCCCCACTaGGCCCTCCCTGCACTCGCA | + |
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Preference number: 2 (lower is better) Translates to: GAGRCLARGHSPGQRRRRALGPH*ALPALA Trigger: TGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGC...TCGCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGCGAGGTTCTGCTGGCAGGTaGCGCCATTCTGGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GAGRCLARGHSPGQRRRRGSAGR*RHSGRA Trigger: TGCTCTGCCAGAATGGCGGCACCTGCCAGCAGAACC...TCGCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGAGTAGCACCTGGGAGCAGCTCGGCCGCACCCGTGTCGCCGCCGGGCCAGCAGGTGCCGCCATTCTaGCAGAGCAGCTGGTCATCG | + |
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Preference number: 2 (lower is better) Translates to: LRVAPGSSSAAPVSPPGQQVPPF*QSSWSS Trigger: CGATGACCAGCTGCTCTGCCAGAATGGCGGCACCTG...CTGGCCCGGCGGCGACACGGGTGCGGCCGAGCTGCTCCCAGGTGCTACTCGCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR GCA 90 bp | TCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCAGCTCTGCGGAGCCATTaGGATAGTAGCCCAGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: SSHLGPTAPSLHSQKPVSALRSH*DSSPGG Trigger: GCCGCCTGGGCTACTATCGCAATGGCTCCGCAGAGC...TGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR CCA 90 bp | GGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGCGAGGTCACTTCTGGCAGAGCAGCTaGTCATCGTCGCACACATTG | + |
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Preference number: 2 (lower is better) Translates to: GRCLARGHSPGQRRRRGHFWQSS*SSSHTL Trigger: CAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAA...GTGACCTCGCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGGTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCATGCACAGAGCCGATCTaGTTACAGTTACATTCAATG | + |
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Preference number: 2 (lower is better) Translates to: SRVSGRGTMPGARSQSGPCTEPI*LQLHSM Trigger: CATTGAATGTAACTGTAACCAGATCGGCTCTGTGCA...TGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCAGGTGCCGCCATTCTGGCAGAGCAGCTGGTCATCGTCGCACACATTGGCTCATCATCCAGCTCTaGGGAGCCATTGCGATAGTA | + |
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Preference number: 2 (lower is better) Translates to: AGRCRHSGRAAGHRRTHWLIIQL*GAIAIV Trigger: TACTATCGCAATGGCTCCGCAGAGCTGGATGATGAG...CCAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCACCTGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGGGACCTGCTGGTACCTaGCAAGACATGGAGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GKKGRGRHPWGTLIPTCWGPAGT*QDMEKA Trigger: TGCCTTCTCCATGTCTTGCCAGGTACCAGCAGGTCC...CCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| 3UTR CAA 90 bp | TTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCATaGCATCGATCGTGCACAGAGCCGATCTGGTTACAGTTACATTCA | + |
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Preference number: 2 (lower is better) Translates to: LGPTAPSLHSQKPVS*HRSCTEPIWLQLHS Trigger: TGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCTGTAGGGACTTGGATGGTAGACGTGGAGGGGATAGAAGTGATAGGGCCCAAGAAAGGGTGGGGTaGGGCATCCCAGAGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: WGCRDLDGRRGGDRSDRAQERVG*GIPENP Trigger: AGGATTCTCTGGGATGCCCCACCCCACCCTTTCTTG...GGCCCTATCACTTCTATCCCCTCCACGTCTACCATCCAAGTCCCTACAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGGTACCTGGCAAGACATaGAGAAGGCAAGAAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GKKGRGRHPWGTLIPTCWVPGKT*RRQERV Trigger: CACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTAC...CCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| 3UTR-3UTR GCA 90 bp | TCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCATACAGTTACATTCAATaGAGACGTTCTCATCATCCA | + |
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Preference number: 2 (lower is better) Translates to: SSHLGPTAPSLHSQKPVSYSYIQ*RRSHHP Trigger: TGGATGATGAGAACGTCTGCATTGAATGTAACTGTA...TGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR CCA 72 bp | GCATCCGAGCAGGGTGTCGGGGCGCGGGACGATGCCTaGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGC | + |
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Preference number: 3 (lower is better) Translates to: ASEQGVGARDDA*RAVTVRASVVG Trigger: GCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCGGATGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 72 bp | GCAGGCATCCGAGCAGGGTGTCGGGGCGCGGGACGATaGCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGT | + |
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Preference number: 3 (lower is better) Translates to: AGIRAGCRGAGR*LARGHSPGQRR Trigger: ACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCGGATGCCTGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR CCA 72 bp | GAGCAGGGAGGGCGGGAGGACTCTGCGAGTAGCACCTaGGAGCAGCTCGGCCGCACCCGTGTCGCCGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: EQGGREDSASST*EQLGRTRVAAG Trigger: CCCGGCGGCGACACGGGTGCGGCCGAGCTGCTCCCAGGTGCTACTCGCAGAGTCCTCCCGCCCTCCCTGCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCGAGTAGCACCTGGGAGCAGCTCGGCCGCACCCGTGTCGCCGCCGGGCCAGAGGCAGTCGTCGCACTaGGGCCCCACTGCGCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LRVAPGSSSAAPVSPPGQRQSSH*GPTAPS Trigger: GGAGGGCGCAGTGGGGCCCAAGTGCGACGACTGCCT...CTGGCCCGGCGGCGACACGGGTGCGGCCGAGCTGCTCCCAGGTGCTACTCGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 72 bp | GGCAGTCGTCGCACTTGGGCCCCACTGCGCCCTCCCTaGACTCGCAGAAGCCTGTCTCATTGCATCGATCGT | + |
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Preference number: 3 (lower is better) Translates to: GSRRTWAPLRPP*TRRSLSHCIDR Trigger: ACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGACTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR CCA 72 bp | GCGCAGCGTTGGTTCTGCTGGCAGGTGCCGCCATTCTaGCAGAGCAGCTGGTCATCGTCGCACACATTGGGA | + |
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Preference number: 3 (lower is better) Translates to: AQRWFCWQVPPF*QSSWSSSHTLG Trigger: TCCCAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCACCTGCCAGCAGAACCAACGCTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 72 bp | TGCAGACGTTCTCATCATCCAGCTCTGCGGAGCCATTaGGATAGTAGCCCAGGCGGCAGTGCTGACAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: CRRSHHPALRSH*DSSPGGSADSV Trigger: AACACTGTCAGCACTGCCGCCTGGGCTACTATCGCAATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 72 bp | CGTGCACAGAGCCGATCTGGTTACAGTTACATTCAATaGAGACGTTCTCATCATCCAGCTCTGCGGAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: RAQSRSGYSYIQ*RRSHHPALRSH Trigger: ATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGCATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR GCA 72 bp | CTGCACTCGCAGAAGCCTGTCTCATTGCATCGATCGTaGACAGAGCCGATCTGGTTACAGTTACATTCAATG | + |
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Preference number: 3 (lower is better) Translates to: LHSQKPVSLHRS*TEPIWLQLHSM Trigger: CATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| 3UTR CCA 72 bp | CCTGTCTCATTGCATCGATCGTGCACAGAGCCGATCTaGTTACAGTTACATTCAATGCAGACGTTCTCATCA | + |
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Preference number: 3 (lower is better) Translates to: PVSLHRSCTEPI*LQLHSMQTFSS Trigger: TGATGAGAACGTCTGCATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR TCA 90 bp | GTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGGGACCCTGCCCAGCGTaGGTACTCCTCGGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VSGRGTMPGARSQSGPASGPCPA*VLLGAE Trigger: CTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCC...CGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR TCA 90 bp | TCCGAGCAGGGTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGGGGGTCTCCGCACGTaGTGCCTGAGGGCTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: SEQGVGARDDAWRAVTVRGGLRT*CLRAPL Trigger: AAGTGGAGCCCTCAGGCATCACGTGCGGAGACCCCC...CCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCGGA 72% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR GCA 90 bp | AGCAGGGTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCATGCGGAAGTTCTTCTTaGACCTGCCACAGTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SRVSGRGTMPGARSQSGPCGSSS*TCHSRG Trigger: GCCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCA...TGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR GCA 90 bp | GCGAGTAGCACCTGGGAGCAGCTCGGCCGCACCCGTGTCGCCGCCGGGCCAGGGCTCCATGCAGTCCTCTaGATAGAACTGGTAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ASSTWEQLGRTRVAAGPGLHAVL*IELVGL Trigger: CAGCCCTACCAGTTCTATGCAGAGGACTGCATGGAG...CCCTGGCCCGGCGGCGACACGGGTGCGGCCGAGCTGCTCCCAGGTGCTACTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR GCA 90 bp | CGAGCAGGGTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCGGAAGTCAATGTAGCTaGAACGGTTGGAGTGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: RAGCRGAGRCLARGHSPGGSQCS*NGWSGR Trigger: ACGGCCACTCCAACCGTTGCAGCTACATTGACTTCC...GCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR CCA 90 bp | GTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGCATGCTTCTCTTTCTTaGACCCTGCCCAGCGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VSGRGTMPGARSQSGPASHASLS*TLPSVS Trigger: ACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATG...CGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR GCA 90 bp | GGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGCGAACCTCAAAGCGCACATaGTTCTCTTTCTTGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: GAGRCLARGHSPGQRRRRTSKRT*FSFLDP Trigger: AGGGTCCAAGAAAGAGAAGCATGTGCGCTTTGAGGT...TCGCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR TCA 90 bp | TCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCAACTTCTCGAGGACCATaGCCGTGGGCCGGCCATACT | + |
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Preference number: 4 (lower is better) Translates to: SSHLGPTAPSLHSQKPVSTSRGP*PWAGHT Trigger: AGTATGGCCGGCCCACGGTCATGGTCCTCGAGAAGT...TGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR GCA 90 bp | TCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCAAGTTCTTCTTGCACCTaGCACAGTCGGGGCCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSHLGPTAPSLHSQKPVSSSSCT*HSRGPW Trigger: CCACGGGCCCCGACTGTGGCAGGTGCAAGAAGAACT...TGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR TCA 90 bp | GTAGACGTGGAGGGGATAGAAGTGATAGGGCCCCTCCATGTGGCCTCAGTGGCCGGACCCTGCCCAGCGTaGGTACTCCTCGGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VDVEGIEVIGPLHVASVAGPCPA*VLLGAE Trigger: CTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCC...GGCCACTGAGGCCACATGGAGGGGCCCTATCACTTCTATCCCCTCCACGTCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR GCA 90 bp | GCTGGCAGGTGCCGCCATTCTGGCAGAGCAGCTGGTCATCGTCGCACACATTGGACCAGCGGGAGGCAGTaGAGGAAGAGAGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGRCRHSGRAAGHRRTHWTSGRQ*RKRASR Trigger: CCTGCTGGCTCTCTTCCTGCACTGCCTCCCGCTGGT...CCAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCACCTGCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR CCA 90 bp | TCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCACAGGGCCGGCAAAGATaGCAAAGCGGTCCCTTACCT | + |
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Preference number: 4 (lower is better) Translates to: SSHLGPTAPSLHSQKPVSQGRQR*QSGPLP Trigger: AGGTAAGGGACCGCTTTGCCATCTTTGCCGGCCCTG...TGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR TCA 90 bp | GGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGGGGGGTCTCCGCACGTaGTGCCTGAGGGCTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: GKKGRGRHPWGTLIPTCWGGLRT*CLRAPL Trigger: AAGTGGAGCCCTCAGGCATCACGTGCGGAGACCCCC...CCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR GCA 90 bp | GGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGGTGAGTACTCCTCGGTaGAGAGCACCCGGTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GKKGRGRHPWGTLIPTCWVSTPR*RAPGGR Trigger: GCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCAC...CCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGGTGCAGAGCACCCGGTaGGCGCTGGAGGGTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: GKKGRGRHPWGTLIPTCWVQSTR*ALEGDM Trigger: CATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCAC...CCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | AGGCAGTCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTTGGTCACCCAGGATTTaGAGATGTCATAGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQSSHLGPTAPSLHSQKPWSPRI*RCHSPQ Trigger: CTGGGGACTATGACATCTGCAAATCCTGGGTGACCA...AGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGACTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CCA 90 bp | TCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCATCAGGCGCATCACCTTaGGCTGGCAGGCATAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSHLGPTAPSLHSQKPVSSGASP*AGRHRI Trigger: AATTCTATGCCTGCCAGCCCAAGGTGATGCGCCTGA...TGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CCA 90 bp | TCGTCGCACTTGGGCCCCACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCAACTCGCAGTTGCAGCTaGGCAGGCTACATACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SSHLGPTAPSLHSQKPVSTRSCS*AGYIRT Trigger: TGTACGTATGTAGCCTGCCCAGCTGCAACTGCGAGT...TGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGTGGGGCCCAAGTGCGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGCTGTAGGGACTTGGATGGTAGACGTGGAGGGGATAGAAGTGATAGGGCCACCAGCGGGAGGCAGTaGAGGAAGAGAGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WGCRDLDGRRGGDRSDRATSGRQ*RKRASR Trigger: CCTGCTGGCTCTCTTCCTGCACTGCCTCCCGCTGGT...GGCCCTATCACTTCTATCCCCTCCACGTCTACCATCCAAGTCCCTACAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | GAGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGTAGGGCTGCCAGGTaGGGCCATTGTCCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EARREGAGIPGVLSYLPVGRAAR*GHCPGT Trigger: AGTCCCTGGACAATGGCCGCACCTGGCAGCCCTACC...AACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | GTAGACGTGGAGGGGATAGAAGTGATAGGGCCCCTCCATGTGGCCTCAGTGGCCTGCGGAAGTTCTTCTTaGACCTGCCACAGTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDVEGIEVIGPLHVASVACGSSS*TCHSRG Trigger: GCCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCA...GGCCACTGAGGCCACATGGAGGGGCCCTATCACTTCTATCCCCTCCACGTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR TCA 90 bp | AGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGACTTCTCGAGGACCATaGCCGTGGGCCGGCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: RQEGKGQASLGYSHTYLLTSRGP*PWAGHT Trigger: AGTATGGCCGGCCCACGGTCATGGTCCTCGAGAAGT...CAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | TGGGGCTGTAGGGACTTGGATGGTAGACGTGGAGGGGATAGAAGTGATAGGGCCCACGTCGGGCAGACATaGCGAAGGCCTCCATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WGCRDLDGRRGGDRSDRAHVGQT*RRPPCS Trigger: ACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTG...GGCCCTATCACTTCTATCCCCTCCACGTCTACCATCCAAGTCCCTACAGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | TGCCGCCATTCTGGCAGAGCAGCTGGTCATCGTCGCACACATTGGGATAGCATCCACGTCGGGCAGACATaGCGAAGGCCTCCATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CRHSGRAAGHRRTHWDSIHVGQT*RRPPCS Trigger: ACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTG...GATGCTATCCCAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGAGTTCTTCTTGCACCTaGCACAGTCGGGGCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQEGKGQASLGYSHTYLLSSSCT*HSRGPW Trigger: CCACGGGCCCCGACTGTGGCAGGTGCAAGAAGAACT...CAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | GTAGACGTGGAGGGGATAGAAGTGATAGGGCCCCTCCATGTGGCCTCAGTGGCCTGCCGAAGGCCTCCATaGAGTCCTCTGCATAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VDVEGIEVIGPLHVASVACRRPP*SPLHRT Trigger: AGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCA...GGCCACTGAGGCCACATGGAGGGGCCCTATCACTTCTATCCCCTCCACGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR CCA 90 bp | GTAGACGTGGAGGGGATAGAAGTGATAGGGCCCCTCCATGTGGCCTCAGTGGCCCATGCTTCTCTTTCTTaGACCCTGCCCAGCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VDVEGIEVIGPLHVASVAHASLS*TLPSVS Trigger: ACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATG...GGCCACTGAGGCCACATGGAGGGGCCCTATCACTTCTATCCCCTCCACGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTCAGGGCCGGCAAAGATaGCAAAGCGGTCCCTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: EARREGAGIPGVLSYLPVQGRQR*QSGPLP Trigger: AGGTAAGGGACCGCTTTGCCATCTTTGCCGGCCCTG...AACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| 3UTR CAA 72 bp | ACTGCGCCCTCCCTGCACTCGCAGAAGCCTGTCTCATaGCATCGATCGTGCACAGAGCCGATCTGGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TAPSLHSQKPVS*HRSCTEPIWLQ Trigger: CTGTAACCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAGGGAGGGCGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTGGTACCTGGCAAGACATGGAGAAGGCAAGAAAGGGTGGGGTGGGGCATGTTCCATGAGAGGGTaGTGTTGGCCTCTAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCWYLARHGEGKKGWGGACSMRG*CWPLVD Trigger: GTCCACTAGAGGCCAACATCACCCTCTCATGGAACA...TGCCCCACCCCACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTACCAGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR TCA 90 bp | TGGGGCTGTAGGGACTTGGATGGTAGACGTGGAGGGGATAGAAGTGATAGGGCCCACGCTCTTGTTCCATaGGAGGGTGATGTTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WGCRDLDGRRGGDRSDRAHALVP*EGDVGL Trigger: GAGGCCAACATCACCCTCTCATGGAACAAGAGCGTG...GGCCCTATCACTTCTATCCCCTCCACGTCTACCATCCAAGTCCCTACAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTGGTACCTGGCAAGACATGGAGAAGGCAAGAAAGGGTGGGGTGGGGCACTCCATGCAGTCCTCTaGATAGAACTGGTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCWYLARHGEGKKGWGGALHAVL*IELVGL Trigger: CAGCCCTACCAGTTCTATGCAGAGGACTGCATGGAG...TGCCCCACCCCACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTACCAGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | GAGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTTGTTCACACTCACACTaGAGGCTGCCCTCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EARREGAGIPGVLSYLPVCSHSH*RLPSRT Trigger: AGTGCGAGAGGGCAGCCTGCAGTGTGAGTGTGAACA...AACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGCATAGAATTCCCAGGTaGGGCCCTCATCTGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKKGRGRHPWGTLIPTCWHRIPR*GPHLWS Trigger: TGACCACAGATGAGGGCCCCACCTGGGAATTCTATG...CCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| 3UTR CAA 72 bp | CAGCTGGTCATCGTCGCACACATTGGGATAGCATCCTaGGCGCCAGTAGTGTGTAGGAAGGCAGTCGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLVIVAHIGIAS*APVVCRKAVVA Trigger: TGCGACGACTGCCTTCCTACACACTACTGGCGCCAAGGATGCTATCCCAATGTGTGCGACGATGACCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR GCA 90 bp | TGCCGCCATTCTGGCAGAGCAGCTGGTCATCGTCGCACACATTGGGATAGCATCTGCCGAAGGCCTCCATaGAGTCCTCTGCATAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CRHSGRAAGHRRTHWDSICRRPP*SPLHRT Trigger: AGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCA...GATGCTATCCCAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGTCAGGCGCATCACCTTaGGCTGGCAGGCATAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RQEGKGQASLGYSHTYLLSGASP*AGRHRI Trigger: AATTCTATGCCTGCCAGCCCAAGGTGATGCGCCTGA...CAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | GAGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTTGGTCACCCAGGATTTaGAGATGTCATAGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EARREGAGIPGVLSYLPVWSPRI*RCHSPQ Trigger: CTGGGGACTATGACATCTGCAAATCCTGGGTGACCA...AACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | ATCGATCGTGCACAGAGCCGATCTGGTTACAGTTACATTCAATGCAGACGTTCTGTGAGTACTCCTCGGTaGAGAGCACCCGGTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IDRAQSRSGYSYIQCRRSVSTPR*RAPGGR Trigger: GCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCAC...AGAACGTCTGCATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CCA 90 bp | GGCGCAGCGTTGGTTCTGCTGGCAGGTGCCGCCATTCTGGCAGAGCAGCTGGTCCTTCGATATTGGAGATaGCATAGAAGTACTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAALVLLAGAAILAEQLVLRYWR*HRSTCR Trigger: TCTACAAGTACTTCTATGCCATCTCCAATATCGAAG...GACCAGCTGCTCTGCCAGAATGGCGGCACCTGCCAGCAGAACCAACGCTGCGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGACCTCAAAGCGCACATaGTTCTCTTTCTTGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQEGKGQASLGYSHTYLLTSKRT*FSFLDP Trigger: AGGGTCCAAGAAAGAGAAGCATGTGCGCTTTGAGGT...CAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGCTGTGGGGTGCTTGGGTTTGCTGCTGACTCTTaGAGGAGTAGAAGATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGIPGVLSYLPVGCGVLGFAADS*RSRRSF Trigger: AAAGGATCTTCTACTCCTCCAAGAGTCAGCAGCAAA...CCCAAGCACCCCACAGCCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTTACAGTTACATTCAATGCAGACGTTCTCATCATCCAGCTCTGCGGAGCCTGTTCACACTCACACTaGAGGCTGCCCTCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVTVTFNADVLIIQLCGACSHSH*RLPSRT Trigger: AGTGCGAGAGGGCAGCCTGCAGTGTGAGTGTGAACA...GGCTCCGCAGAGCTGGATGATGAGAACGTCTGCATTGAATGTAACTGTAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR TCA 90 bp | GTTACATTCAATGCAGACGTTCTCATCATCCAGCTCTGCGGAGCCATTGCGATATGTTCCATGAGAGGGTaGTGTTGGCCTCTAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTFNADVLIIQLCGAIAICSMRG*CWPLVD Trigger: GTCCACTAGAGGCCAACATCACCCTCTCATGGAACA...TATCGCAATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGCATTGAATGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CCA 90 bp | GATCGTGCACAGAGCCGATCTGGTTACAGTTACATTCAATGCAGACGTTCTCATCATAGAATTCCCAGGTaGGGCCCTCATCTGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRAQSRSGYSYIQCRRSHHRIPR*GPHLWS Trigger: TGACCACAGATGAGGGCCCCACCTGGGAATTCTATG...ATGAGAACGTCTGCATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTCTTCGATATTGGAGATaGCATAGAAGTACTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EARREGAGIPGVLSYLPVLRYWR*HRSTCR Trigger: TCTACAAGTACTTCTATGCCATCTCCAATATCGAAG...AACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
||
| CDS CCA 90 bp | GCTTGGTCTGACTGCCAAAGGCGGAGCCCGCGGCCGCACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAGCTCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWSDCQRRSPRPHRH*ESRGAAAGRSQLAR Trigger: CCTGGCGAGCTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTGCGGCCGCGGGCTCCGCCTTTGGCAGTCAGACCAAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048455.9 |
||
| CDS CCA 90 bp | AGCACTCGCAGTTGCCAAAGGCGGAGCCCGCGGCCGCACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAGCTCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STRSCQRRSPRPHRH*ESRGAAAGRSQLAR Trigger: CCTGGCGAGCTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTGCGGCCGCGGGCTCCGCCTTTGGCAACTGCGAGTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102873.8 |
||
| CDS-3UTR CAA 90 bp | TCCGAGCAGGGTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGTCGGGGCCCGTGGTGTaGTGTTCACACTCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SEQGVGARDDAWRAVTVRSGPVV*CSHSHC Trigger: GCAGTGTGAGTGTGAACACAACACCACGGGCCCCGA...CCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGTAGCACCTGGGAGCAGCTCGGCCGCACCCGTGTCGCCGCCGGGCCAGGGCGCACTGTGCACAGGTaGGCATGCAGGTTGCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASSTWEQLGRTRVAAGPGRTVHR*ACRLHL Trigger: TAAGTGCAACCTGCATGCCAACCTGTGCACAGTGCG...CCCTGGCCCGGCGGCGACACGGGTGCGGCCGAGCTGCTCCCAGGTGCTACTCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS-3UTR CAA 90 bp | GGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAGCGTCGTCGGCGAGGTCACGTGCGGAAGTTCTTCTaGCACCTGCCACAGTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRCLARGHSPGQRRRRGHVRKFF*HLPQSG Trigger: CCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCAC...GTGACCTCGCCGACGACGCTGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS CCA 90 bp | CTGCCCAGCGTGAGTACTCCTCGGTGCAGAGCACCCGGTGGGCGCTaGAGGGTGACATGTCTCGGGCACGTCGGGCAGACATGCCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSVSTPRCRAPGGR*RVTCLGHVGQTCRR Trigger: CCTTCGGCATGTCTGCCCGACGTGCCCGAGACATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
||
| CDS CCA 90 bp | TTGGACCCTGCCCAGCGTGAGTACTCCTCGGTGCAGAGCACCCGGTaGGCGCTGGAGGGTGACATGTCTCGGGCACGTCGGGCAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: LDPAQREYSSVQSTR*ALEGDMSRARRADM Trigger: CATGTCTGCCCGACGTGCCCGAGACATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGTGTCGGGGCGCGGGACGATGCCTGGCGCGCGGTCACAGTCCGGGCCAAGGTTGGCATGCAGGTaGCACTTACACCTGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SRVSGRGTMPGARSQSGPRLACR*HLHLPM Trigger: CATTGGCAGGTGTAAGTGCAACCTGCATGCCAACCT...TGGCCCGGACTGTGACCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
||
| CDS CCA 90 bp | AGCACTCGCAGTCTGAGAAGGGTTGGCCTGCATACGTACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAGCTCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STRSLRRVGLHTYRH*ESRGAAAGRSQLAR Trigger: CCTGGCGAGCTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTACGTATGCAGGCCAACCCTTCTCAGACTGCGAGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177689.8 |
||
| CDS GCA 90 bp | TCGGGCACGTCGGGCAGACATGCCGAAGGCCTCCATGCAGTCCTCTaGATAGAACTGGTAGGGCTGCCAGGTGCGGCCATTGTCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGTSGRHAEGLHAVL*IELVGLPGAAIVQG Trigger: TCCCTGGACAATGGCCGCACCTGGCAGCCCTACCAGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTGCCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
||
| CDS GCA 90 bp | GGTGGGCGCTGGAGGGTGACATGTCTCGGGCACGTCGGGCAGACATaGCGAAGGCCTCCATGCAGTCCTCTGCATAGAACTGGTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRWRVTCLGHVGQT*RRPPCSPLHRTGRA Trigger: AGCCCTACCAGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTGCCCGAGACATGTCACCCTCCAGCGCCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
||
| CDS GCA 90 bp | CATGCTTCTCTTTCTTGGACCCTGCCCAGCGTGAGTACTCCTCGGTaGAGAGCACCCGGTGGGCGCTGGAGGGTGACATGTCTCGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HASLSWTLPSVSTPR*RAPGGRWRVTCLGH Trigger: GTGCCCGAGACATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 90 bp | GCAGGTAGGAGCCAGCTCGCCAGGCGCGTGTGCGGAAGTTCTTCTTaGACCTGCCACAGTCGGGGCCCGTGGTGTTGTGTTCACACTCAC | + |
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Preference number: 5 (lower is better) Translates to: AGRSQLARRVCGSSS*TCHSRGPWCCVHTH Trigger: GTGAGTGTGAACACAACACCACGGGCCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCACACGCGCCTGGCGAGCTGGCTCCTACCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS TCA 90 bp | AGGGCTGCCAGGTGCGGCCATTGTCCAGGGACTTCTCGAGGACCATaGCCGTGGGCCGGCCATACTCAAAAGTCACCACCACGTCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: RAARCGHCPGTSRGP*PWAGHTQKSPPRRL Trigger: CAGACGACGTGGTGGTGACTTTTGAGTATGGCCGGCCCACGGTCATGGTCCTCGAGAAGTCCCTGGACAATGGCCGCACCTGGCAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 90 bp | GTGACATGTCTCGGGCACGTCGGGCAGACATGCCGAAGGCCTCCATaGAGTCCTCTGCATAGAACTGGTAGGGCTGCCAGGTGCGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VTCLGHVGQTCRRPP*SPLHRTGRAARCGH Trigger: ATGGCCGCACCTGGCAGCCCTACCAGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTGCCCGAGACATGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 90 bp | CACCTGCCACAGTCGGGGCCCGTGGTGTTGTGTTCACACTCACACTaGAGGCTGCCCTCTCGCACTGTGCACAGGTTGGCATGCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLPQSGPVVLCSHSH*RLPSRTVHRLACRL Trigger: CAACCTGCATGCCAACCTGTGCACAGTGCGAGAGGGCAGCCTGCAGTGTGAGTGTGAACACAACACCACGGGCCCCGACTGTGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 90 bp | GTCCTTGGCTTGGGAAGGGACAGCGACAGAGATAGCTACAGCTTCTaGACTGGAGGACACCTGGGGCCAGAAGGAGCTGTCCCCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGLGRDSDRDSYSF*TGGHLGPEGAVPKG Trigger: CCCCTTGGGGACAGCTCCTTCTGGCCCCAGGTGTCCTCCAGTGCAGAAGCTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048455.9 |
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| CDS-3UTR CAA 90 bp | GGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGTGCCAGGTGCGGCCATaGTCCAGGGACTTCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKKGRGRHPWGTLIPTCWCQVRP*SRDFSR Trigger: CCTCGAGAAGTCCCTGGACAATGGCCGCACCTGGCA...CCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | CTGGCAGGTGCCGCCATTCTGGCAGAGCAGCTGGTCATCGTCGCACACATTGGGAAGGTGAAGAACTCCTaGAGGCCCTTGGCGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LAGAAILAEQLVIVAHIGKVKNS*RPLALS Trigger: GGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCTT...CCCAATGTGTGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCACCTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS GCA 90 bp | CACAGTCGGGGCCCGTGGTGTTGTGTTCACACTCACACTGCAGGCTaGCCTCTCGCACTGTGCACAGGTTGGCATGCAGGTTGCACTTAC | + |
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Preference number: 5 (lower is better) Translates to: HSRGPWCCVHTHTAG*PLALCTGWHAGCTY Trigger: GTAAGTGCAACCTGCATGCCAACCTGTGCACAGTGCGAGAGGGCAGCCTGCAGTGTGAGTGTGAACACAACACCACGGGCCCCGACTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGTACCTGGCAAGACATGGAGAAGGCAAGAAAGGGTGGGGTGGGGCATTCGGGGCCCGTGGTGTaGTGTTCACACTCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: PAGTWQDMEKARKGGVGHSGPVV*CSHSHC Trigger: GCAGTGTGAGTGTGAACACAACACCACGGGCCCCGA...ATGCCCCACCCCACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTACCAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGGTACCTGGCAAGACATGGAGAAGGCAAGAAAGGGTGGGGTGGGGCAGTGCGGAAGTTCTTCTaGCACCTGCCACAGTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TCWYLARHGEGKKGWGGAVRKFF*HLPQSG Trigger: CCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCAC...TGCCCCACCCCACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTACCAGCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS GCA 90 bp | GGGCCGGCAAAGATGGCAAAGCGGTCCCTTACCTCAAAGCGCACATaGTTCTCTTTCTTGGACCCTGCCCAGCGTGAGTACTCCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPAKMAKRSLTSKRT*FSFLDPAQREYSSV Trigger: CACCGAGGAGTACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATGTGCGCTTTGAGGTAAGGGACCGCTTTGCCATCTTTGCCGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 90 bp | GTAGCCAGTCCCTCATCTTCCCTGTCAAACATAAGCCGGGGCGGGTaGGCCAGGTCGGGATTGGAGGCATCACACTCATTACTGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VASPSSSLSNISRGG*ARSGLEASHSLLHR Trigger: CCTGTGCAGTAATGAGTGTGATGCCTCCAATCCCGACCTGGCCCACCCGCCCCGGCTTATGTTTGACAGGGAAGATGAGGGACTGGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 90 bp | TGGCAAAGCGGTCCCTTACCTCAAAGCGCACATGCTTCTCTTTCTTaGACCCTGCCCAGCGTGAGTACTCCTCGGTGCAGAGCACCCGGT | + |
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Preference number: 5 (lower is better) Translates to: WQSGPLPQSAHASLS*TLPSVSTPRCRAPG Trigger: ACCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATGTGCGCTTTGAGGTAAGGGACCGCTTTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS-3UTR CAA 90 bp | AGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGAACTCCTTGAGGCCCTaGGCGCTCTCCATCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQEGKGQASLGYSHTYLLNSLRP*ALSILV Trigger: CACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTT...CAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGGTACCTGGCAAGACATGGAGAAGGCAAGAAAGGGTGGGGTGGGGCAAAGGTGAAGAACTCCTaGAGGCCCTTGGCGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TCWYLARHGEGKKGWGGAKVKNS*RPLALS Trigger: GGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCTT...TGCCCCACCCCACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTACCAGCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | GCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTGGCTGTGGGGTGCTTGGGCGCACTGTGCACAGGTaGGCATGCAGGTTGCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: AGIPGVLSYLPVGCGVLGRTVHR*ACRLHL Trigger: TAAGTGCAACCTGCATGCCAACCTGTGCACAGTGCG...CCCAAGCACCCCACAGCCAACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | CCTGCTGGTACCTGGCAAGACATGGAGAAGGCAAGAAAGGGTGGGGTGGGGCATTGGGCCAGGTCGGGATaGGAGGCATCACACTCATTA | + |
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Preference number: 5 (lower is better) Translates to: PAGTWQDMEKARKGGVGHWARSG*EASHSL Trigger: TAATGAGTGTGATGCCTCCAATCCCGACCTGGCCCA...ATGCCCCACCCCACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTACCAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | GAGGCAAGAAGGGAAGGGGCAGGCATCCCTGGGGTACTCTCATACCTACCTGTTACTCCACGTGACGCTTaGCCAGTAGGTAGCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EARREGAGIPGVLSYLPVTPRDA*PVGSQS Trigger: GGACTGGCTACCTACTGGCAAAGCGTCACGTGGAGT...AACAGGTAGGTATGAGAGTACCCCAGGGATGCCTGCCCCTTCCCTTCTTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | CTGCACTCGCAGAAGCCTGTCTCATTGCATCGATCGTGCACAGAGCCGATCTGGACTCCACGTGACGCTTaGCCAGTAGGTAGCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHSQKPVSLHRSCTEPIWTPRDA*PVGSQS Trigger: GGACTGGCTACCTACTGGCAAAGCGTCACGTGGAGT...CCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR CAA 90 bp | ACCTGCTGGTACCTGGCAAGACATGGAGAAGGCAAGAAAGGGTGGGGTGGGGCAACATGCTTCTCTTTCTaGGACCCTGCCCAGCGTGAG | + |
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Preference number: 5 (lower is better) Translates to: TCWYLARHGEGKKGWGGATCFSF*DPAQRE Trigger: CTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATGT...TGCCCCACCCCACCCTTTCTTGCCTTCTCCATGTCTTGCCAGGTACCAGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | GTAGACGTGGAGGGGATAGAAGTGATAGGGCCCCTCCATGTGGCCTCAGTGGCCGGGGTCTGCCATAGTTaGACACTGACAAGCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VDVEGIEVIGPLHVASVAGVCHS*TLTSPL Trigger: CAAAGGGCTTGTCAGTGTCAAACTATGGCAGACCCC...GGCCACTGAGGCCACATGGAGGGGCCCTATCACTTCTATCCCCTCCACGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS-3UTR CAA 90 bp | CTGCACTCGCAGAAGCCTGTCTCATTGCATCGATCGTGCACAGAGCCGATCTGGTGGGCCAGGTCGGGATaGGAGGCATCACACTCATTA | + |
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Preference number: 5 (lower is better) Translates to: LHSQKPVSLHRSCTEPIWWARSG*EASHSL Trigger: TAATGAGTGTGATGCCTCCAATCCCGACCTGGCCCA...CCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS-3UTR CAA 90 bp | TGGGGCTGTAGGGACTTGGATGGTAGACGTGGAGGGGATAGAAGTGATAGGGCCAGGTTGGCATGCAGGTaGCACTTACACCTGCCAATG | + |
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Preference number: 5 (lower is better) Translates to: WGCRDLDGRRGGDRSDRARLACR*HLHLPM Trigger: CATTGGCAGGTGTAAGTGCAACCTGCATGCCAACCT...GGCCCTATCACTTCTATCCCCTCCACGTCTACCATCCAAGTCCCTACAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS GCA 90 bp | CACTCACACTGCAGGCTGCCCTCTCGCACTGTGCACAGGTTGGCATaGAGGTTGCACTTACACCTGCCAATGACTTCGATATTGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: HSHCRLPSRTVHRLA*RLHLHLPMTSILEM Trigger: CATCTCCAATATCGAAGTCATTGGCAGGTGTAAGTGCAACCTGCATGCCAACCTGTGCACAGTGCGAGAGGGCAGCCTGCAGTGTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS-3UTR CAA 90 bp | CTGGTTACAGTTACATTCAATGCAGACGTTCTCATCATCCAGCTCTGCGGAGCCAACTCCTTGAGGCCCTaGGCGCTCTCCATCCTCGTG | + |
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Preference number: 5 (lower is better) Translates to: LVTVTFNADVLIIQLCGANSLRP*ALSILV Trigger: CACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTT...GGCTCCGCAGAGCTGGATGATGAGAACGTCTGCATTGAATGTAACTGTAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS CCA 90 bp | TCGTGTACAGGTTGTCCATGTTACGCAGGTCAGGGCCGGCAAAGATaGCAAAGCGGTCCCTTACCTCAAAGCGCACATGCTTCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCTGCPCYAGQGRQR*QSGPLPQSAHASLS Trigger: AGAAAGAGAAGCATGTGCGCTTTGAGGTAAGGGACCGCTTTGCCATCTTTGCCGGCCCTGACCTGCGTAACATGGACAACCTGTACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS-3UTR CAA 90 bp | TTGCATCGATCGTGCACAGAGCCGATCTGGTTACAGTTACATTCAATGCAGACGACATGCTTCTCTTTCTaGGACCCTGCCCAGCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHRSCTEPIWLQLHSMQTTCFSF*DPAQRE Trigger: CTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATGT...CGTCTGCATTGAATGTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS CCA 72 bp | GACTGCCAAAGGCGGAGCCCGCGGCCGCACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DCQRRSPRPHRH*ESRGAAAGRSQ Trigger: CTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTGCGGCCGCGGGCTCCGCCTTTGGCAGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048455.9 |
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| CDS CCA 72 bp | CAGTGCCAAAGGCGGAGCCCGCGGCCGCACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QCQRRSPRPHRH*ESRGAAAGRSQ Trigger: CTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTGCGGCCGCGGGCTCCGCCTTTGGCACTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091153.9 |
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| CDS CCA 72 bp | AGTTGCCAAAGGCGGAGCCCGCGGCCGCACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCQRRSPRPHRH*ESRGAAAGRSQ Trigger: CTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTGCGGCCGCGGGCTCCGCCTTTGGCAACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102873.8 |
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| CDS CCA 72 bp | GCCCAGCGTGAGTACTCCTCGGTGCAGAGCACCCGGTaGGCGCTGGAGGGTGACATGTCTCGGGCACGTCGG | + |
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Preference number: 6 (lower is better) Translates to: AQREYSSVQSTR*ALEGDMSRARR Trigger: CCGACGTGCCCGAGACATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS TCA 72 bp | CTCCTCGGTGCAGAGCACCCGGTGGGCGCTGGAGGGTaGCATGTCTCGGGCACGTCGGGCAGACATGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLGAEHPVGAGG*HVSGTSGRHAE Trigger: TTCGGCATGTCTGCCCGACGTGCCCGAGACATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 72 bp | GTGAGTACTCCTCGGTGCAGAGCACCCGGTGGGCGCTaGAGGGTGACATGTCTCGGGCACGTCGGGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: VSTPRCRAPGGR*RVTCLGHVGQT Trigger: TGTCTGCCCGACGTGCCCGAGACATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 72 bp | GAGCCAGCTCGCCAGGCGCGTGTGCGGAAGTTCTTCTaGCACCTGCCACAGTCGGGGCCCGTGGTGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EPARQARVRKFF*HLPQSGPVVLC Trigger: ACACAACACCACGGGCCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCACACGCGCCTGGCGAGCTGGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | CTCGGGCACGTCGGGCAGACATGCCGAAGGCCTCCATaGAGTCCTCTGCATAGAACTGGTAGGGCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGHVGQTCRRPP*SPLHRTGRAAR Trigger: CCTGGCAGCCCTACCAGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTGCCCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | CTTTCTTGGACCCTGCCCAGCGTGAGTACTCCTCGGTaGAGAGCACCCGGTGGGCGCTGGAGGGTGACATGT | + |
|
Preference number: 6 (lower is better) Translates to: LSWTLPSVSTPR*RAPGGRWRVTC Trigger: ACATGTCACCCTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCCAAGAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | AGCCAGCTCGCCAGGCGCGTGTGCGGAAGTTCTTCTTaGACCTGCCACAGTCGGGGCCCGTGGTGTTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQLARRVCGSSS*TCHSRGPWCCV Trigger: AACACAACACCACGGGCCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCACACGCGCCTGGCGAGCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 72 bp | CAGTTGCAGCTGGGCAGGCTACATACGTACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLQLGRLHTYRH*ESRGAAAGRSQ Trigger: CTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTACGTATGTAGCCTGCCCAGCTGCAACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS GCA 72 bp | CCCAGGTGGGGCCCTCATCTGTGGTCACCCAGGATTTaGAGATGTCATAGTCCCCAGAGACCAGCGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRWGPHLWSPRI*RCHSPQRPAGG Trigger: GCCTCCCGCTGGTCTCTGGGGACTATGACATCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | CAGTCGGGGCCCGTGGTGTTGTGTTCACACTCACACTaGAGGCTGCCCTCTCGCACTGTGCACAGGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSGPVVLCSHSH*RLPSRTVHRLA Trigger: TGCCAACCTGTGCACAGTGCGAGAGGGCAGCCTGCAGTGTGAGTGTGAACACAACACCACGGGCCCCGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 72 bp | AGTCTGAGAAGGGTTGGCCTGCATACGTACAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLRRVGLHTYRH*ESRGAAAGRSQ Trigger: CTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTACGTATGCAGGCCAACCCTTCTCAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177689.8 |
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| CDS GCA 72 bp | TCGGGCAGACATGCCGAAGGCCTCCATGCAGTCCTCTaGATAGAACTGGTAGGGCTGCCAGGTGCGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: SGRHAEGLHAVL*IELVGLPGAAI Trigger: AATGGCCGCACCTGGCAGCCCTACCAGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCATGTCTGCCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | AGAAGTACTTGTAGAGGTTCTCTCGCTGCACGTAGGTaGCACCCAGCGCAGGACGCAGCAGGCGCATGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RSTCRGSLAARR*HPAQDAAGACA Trigger: TGCGCATGCGCCTGCTGCGTCCTGCGCTGGGTGGCACCTACGTGCAGCGAGAGAACCTCTACAAGTACTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | GGCCCGTGGTGTTGTGTTCACACTCACACTGCAGGCTaGCCTCTCGCACTGTGCACAGGTTGGCATGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GPWCCVHTHTAG*PLALCTGWHAG Trigger: ACCTGCATGCCAACCTGTGCACAGTGCGAGAGGGCAGCCTGCAGTGTGAGTGTGAACACAACACCACGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 90 bp | GGACGCAGCAGGCGCATGCGCAGGTCAGTGAAGGTGAAGAACTCCTaGAGGCCCTTGGCGCTCTCCATCCTCGTGTACAGGTTGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GRSRRMRRSVKVKNS*RPLALSILVYRLSM Trigger: CATGGACAACCTGTACACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCTTCACTGACCTGCGCATGCGCCTGCTGCGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS TCA 72 bp | AGGTGCGGCCATTGTCCAGGGACTTCTCGAGGACCATaGCCGTGGGCCGGCCATACTCAAAAGTCACCACCA | + |
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Preference number: 6 (lower is better) Translates to: RCGHCPGTSRGP*PWAGHTQKSPP Trigger: TGGTGGTGACTTTTGAGTATGGCCGGCCCACGGTCATGGTCCTCGAGAAGTCCCTGGACAATGGCCGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | TGGAGGGTGACATGTCTCGGGCACGTCGGGCAGACATaGCGAAGGCCTCCATGCAGTCCTCTGCATAGAACT | + |
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Preference number: 6 (lower is better) Translates to: WRVTCLGHVGQT*RRPPCSPLHRT Trigger: AGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTGCCCGAGACATGTCACCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS GCA 72 bp | AGCTGCAACGGTTGGAGTGGCCGTAGCACTCGCAGTTaGAGCTGGGCAGGCTACATACGTACAGGCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: SCNGWSGRSTRS*SWAGYIRTGIG Trigger: CCCAATGCCTGTACGTATGTAGCCTGCCCAGCTGCAACTGCGAGTGCTACGGCCACTCCAACCGTTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS CCA 72 bp | GGGGTGAGTGTGCCATGTTTAAATGAGATGAGGCATTaGGAGAGCCGTGGGGCAGCGGCAGGTAGGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GVSVPCLNEMRH*ESRGAAAGRSQ Trigger: CTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTCATCTCATTTAAACATGGCACACTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS CCA 72 bp | AACGGTTGGAGTGGCCGTAGCACTCGCAGTTGCAGCTaGGCAGGCTACATACGTACAGGCATTGGGAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: NGWSGRSTRSCS*AGYIRTGIGRA Trigger: GGCTCTCCCAATGCCTGTACGTATGTAGCCTGCCCAGCTGCAACTGCGAGTGCTACGGCCACTCCAACCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183583.8 |
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| CDS CAA 72 bp | AGGCGCATGCGCAGGTCAGTGAAGGTGAAGAACTCCTaGAGGCCCTTGGCGCTCTCCATCCTCGTGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: RRMRRSVKVKNS*RPLALSILVYR Trigger: CCTGTACACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCTTCACTGACCTGCGCATGCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 90 bp | ATGGCAAAGCGGTCCCTTACCTCAAAGCGCACATGCTTCTCTTTCTaGGACCCTGCCCAGCGTGAGTACTCCTCGGTGCAGAGCACCCGG | + |
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Preference number: 6 (lower is better) Translates to: MAKRSLTSKRTCFSF*DPAQREYSSVQSTR Trigger: CCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATGTGCGCTTTGAGGTAAGGGACCGCTTTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 90 bp | AAGAACTCCTTGAGGCCCTTGGCGCTCTCCATCCTCGTGTACAGGTaGTCCATGTTACGCAGGTCAGGGCCGGCAAAGATGGCAAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: KNSLRPLALSILVYR*SMLRRSGPAKMAKR Trigger: CCGCTTTGCCATCTTTGCCGGCCCTGACCTGCGTAACATGGACAACCTGTACACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 90 bp | AGGCGCATGCGCAGGTCAGTGAAGGTGAAGAACTCCTTGAGGCCCTaGGCGCTCTCCATCCTCGTGTACAGGTTGTCCATGTTACGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RRMRRSVKVKNSLRP*ALSILVYRLSMLRR Trigger: CCTGCGTAACATGGACAACCTGTACACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCTTCACTGACCTGCGCATGCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 72 bp | CGGTCCCTTACCTCAAAGCGCACATGCTTCTCTTTCTaGGACCCTGCCCAGCGTGAGTACTCCTCGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RSLTSKRTCFSF*DPAQREYSSVQ Trigger: CTGCACCGAGGAGTACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCATGTGCGCTTTGAGGTAAGGGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 72 bp | TTGAGGCCCTTGGCGCTCTCCATCCTCGTGTACAGGTaGTCCATGTTACGCAGGTCAGGGCCGGCAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: LRPLALSILVYR*SMLRRSGPAKM Trigger: CATCTTTGCCGGCCCTGACCTGCGTAACATGGACAACCTGTACACGAGGATGGAGAGCGCCAAGGGCCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS TCA 72 bp | CGTCTGTCAACTCCACGCTCTTGTTCCATGAGAGGGTaGTGTTGGCCTCTAGTGGACTGGGGTAGCGACTCC | + |
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Preference number: 6 (lower is better) Translates to: RLSTPRSCSMRG*CWPLVDWGSDS Trigger: GGAGTCGCTACCCCAGTCCACTAGAGGCCAACATCACCCTCTCATGGAACAAGAGCGTGGAGTTGACAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 72 bp | GGCAGGCATAGAATTCCCAGGTGGGGCCCTCATCTGTaGTCACCCAGGATTTGCAGATGTCATAGTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRHRIPRWGPHL*SPRICRCHSPQ Trigger: CTGGGGACTATGACATCTGCAAATCCTGGGTGACCACAGATGAGGGCCCCACCTGGGAATTCTATGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 72 bp | GGTTGTCCATGTTACGCAGGTCAGGGCCGGCAAAGATaGCAAAGCGGTCCCTTACCTCAAAGCGCACATGCT | + |
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Preference number: 6 (lower is better) Translates to: GCPCYAGQGRQR*QSGPLPQSAHA Trigger: AGCATGTGCGCTTTGAGGTAAGGGACCGCTTTGCCATCTTTGCCGGCCCTGACCTGCGTAACATGGACAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CCA 72 bp | TCACCACGTTCAGGAAGTCAATGTAGCTGCAACGGTTaGAGTGGCCGTAGCACTCGCAGTTGCCAAAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SPRSGSQCSCNG*SGRSTRSCQRR Trigger: CCGCCTTTGGCAACTGCGAGTGCTACGGCCACTCCAACCGTTGCAGCTACATTGACTTCCTGAACGTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102873.8 |
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| CDS CAA 72 bp | CGCAGGTCAGTGAAGGTGAAGAACTCCTTGAGGCCCTaGGCGCTCTCCATCCTCGTGTACAGGTTGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RRSVKVKNSLRP*ALSILVYRLSM Trigger: CATGGACAACCTGTACACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCTTCACTGACCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 90 bp | CTGAGGAGATCTGGGCTTGAGCTCGAAAAGCGTAGAGTCCTTGGCTaGGGAAGGGACAGCGACAGAGATAGCTACAGTGCCAAAGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: LRRSGLELEKRRVLG*GRDSDRDSYSAKGG Trigger: TCCGCCTTTGGCACTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGCCCAGATCTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091153.9 |
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| CDS CCA 72 bp | CTGGGCTTGAGCTCGAAAAGCGTAGAGTCCTTGGCTTaGGAAGGGACAGCGACAGAGATAGCTACAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LGLSSKSVESLA*EGTATEIATVP Trigger: TGGCACTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091153.9 |
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| CDS CAA 72 bp | TCTGGGCTTGAGCTCGAAAAGCGTAGAGTCCTTGGCTaGGGAAGGGACAGCGACAGAGATAGCTACAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SGLELEKRRVLG*GRDSDRDSYSA Trigger: GGCACTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091153.9 |
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| CDS CAA 90 bp | CTGAGGAGATCTGGGCTTGAGCTCGAAAAGCGTAGAGTCCTTGGCTaGGGAAGGGACAGCGACAGAGATAGCTACAGCTTCTGCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LRRSGLELEKRRVLG*GRDSDRDSYSFCTG Trigger: TCCAGTGCAGAAGCTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGCCCAGATCTCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048455.9 |
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| CDS CCA 72 bp | CTGGGCTTGAGCTCGAAAAGCGTAGAGTCCTTGGCTTaGGAAGGGACAGCGACAGAGATAGCTACAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGLSSKSVESLA*EGTATEIATAS Trigger: AGAAGCTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048455.9 |
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| CDS CCA 72 bp | TCACCACGTTCAGGAAGTCAATGTAGCTGCAACGGTTaGAGTGGCCGTAGCACTCGCAGTCTGAGAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SPRSGSQCSCNG*SGRSTRSLRRV Trigger: AACCCTTCTCAGACTGCGAGTGCTACGGCCACTCCAACCGTTGCAGCTACATTGACTTCCTGAACGTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177689.8 |
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| CDS CAA 72 bp | CTGCCCTCTCGCACTGTGCACAGGTTGGCATGCAGGTaGCACTTACACCTGCCAATGACTTCGATATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPSRTVHRLACR*HLHLPMTSILE Trigger: CTCCAATATCGAAGTCATTGGCAGGTGTAAGTGCAACCTGCATGCCAACCTGTGCACAGTGCGAGAGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 72 bp | TCTGGGCTTGAGCTCGAAAAGCGTAGAGTCCTTGGCTaGGGAAGGGACAGCGACAGAGATAGCTACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SGLELEKRRVLG*GRDSDRDSYSF Trigger: GAAGCTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048455.9 |
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| CDS CAA 72 bp | GGAGATCTGGGCTTGAGCTCGAAAAGCGTAGAGTCCTaGGCTTGGGAAGGGACAGCGACAGAGATAGCTACA | + |
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Preference number: 6 (lower is better) Translates to: GDLGLSSKSVES*AWEGTATEIAT Trigger: TGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGCCCAGATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048455.9 ENSMUST00000091153.9 |
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| CDS CAA 72 bp | CGGGCAGGGTATCCCCACAGAAACATGATGATGTCCTaGGAAGCATCCTTAAGGCTCGGGGTCTGCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: RAGYPHRNMMMS*EASLRLGVCHS Trigger: ACTATGGCAGACCCCGAGCCTTAAGGATGCTTCCAAGGACATCATCATGTTTCTGTGGGGATACCCTGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS CAA 90 bp | TGTTCACACTCACACTGCAGGCTGCCCTCTCGCACTGTGCACAGGTaGGCATGCAGGTTGCACTTACACCTGCCAATGACTTCGATATTG | + |
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Preference number: 6 (lower is better) Translates to: CSHSHCRLPSRTVHR*ACRLHLHLPMTSIL Trigger: CAATATCGAAGTCATTGGCAGGTGTAAGTGCAACCTGCATGCCAACCTGTGCACAGTGCGAGAGGGCAGCCTGCAGTGTGAGTGTGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 72 bp | AAAGTCACCACCACGTCGTCTGTCAACTCCACGCTCTaGTTCCATGAGAGGGTGATGTTGGCCTCTAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: KVTTTSSVNSTL*FHERVMLASSG Trigger: TCCACTAGAGGCCAACATCACCCTCTCATGGAACAAGAGCGTGGAGTTGACAGACGACGTGGTGGTGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048455.9 ENSMUST00000071201.5 ENSMUST00000091153.9 ENSMUST00000102873.8 ENSMUST00000177689.8 ENSMUST00000183583.8 |
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| CDS CAA 72 bp | CCTTTGCTGCTGACTCTTGGAGGAGTAGAAGATCCTTaGGGGCGTGGGGTGAGTGTGCCATGTTTAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: PLLLTLGGVEDP*GRGVSVPCLNE Trigger: CTCATTTAAACATGGCACACTCACCCCACGCCCCAAAGGATCTTCTACTCCTCCAAGAGTCAGCAGCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS CAA 72 bp | TTGGAAGCATCCTTAAGGCTCGGGGTCTGCCATAGTTaGACACTGACAAGCCCTTTGCTGCTGACTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LEASLRLGVCHS*TLTSPLLLTLG Trigger: TCCAAGAGTCAGCAGCAAAGGGCTTGTCAGTGTCAAACTATGGCAGACCCCGAGCCTTAAGGATGCTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS CAA 90 bp | ATGATGTCCTTGGAAGCATCCTTAAGGCTCGGGGTCTGCCATAGTTaGACACTGACAAGCCCTTTGCTGCTGACTCTTGGAGGAGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: MMSLEASLRLGVCHS*TLTSPLLLTLGGVE Trigger: TTCTACTCCTCCAAGAGTCAGCAGCAAAGGGCTTGTCAGTGTCAAACTATGGCAGACCCCGAGCCTTAAGGATGCTTCCAAGGACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071201.5 |
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| CDS CCA 72 bp | TCACCACGTTCAGGAAGTCAATGTAGCTGCAACGGTTaGAGTGGCCGTAGCACTCGCAGTCTTGAAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: SPRSGSQCSCNG*SGRSTRSLEIL Trigger: AAGAATTTCAAGACTGCGAGTGCTACGGCCACTCCAACCGTTGCAGCTACATTGACTTCCTGAACGTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048455.9 ENSMUST00000091153.9 |
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