Pregenerated sensors for NTNG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059857Ensembl transcript IDs: ENSMUST00000051253.4, ENSMUST00000072596.12, ENSMUST00000106570.5, ENSMUST00000106571.10, ENSMUST00000106575.10, ENSMUST00000128219.9, ENSMUST00000131027.9, ENSMUST00000133268.9, ENSMUST00000138344.9, ENSMUST00000138953.9, ENSMUST00000156177.9
Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGCCCCGCGGGGGTGCTCCCTGGCCGGATTCGGAGCCACAGCTaGCCGCCTCTTCGCACCGTAGCTTCTCACAGAGGATGCCGGTGT | + |
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Preference number: 1 (lower is better) Translates to: GSPAGVLPGRIRSHS*PPLRTVASHRGCRC Trigger: ACACCGGCATCCTCTGTGAGAAGCTACGGTGCGAAGAGGCGGGCAGCTGTGGCTCCGAATCCGGCCAGGGAGCACCCCCGCGGGGCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR GCA 90 bp | AGCCACAGCTGCCCGCCTCTTCGCACCGTAGCTTCTCACAGAGGATaGCGGTGTAGGCGTCTGGGCACGCGCAGCGCACATTGTTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: SHSCPPLRTVASHRG*RCRRLGTRSAHCSG Trigger: GCCAGAACAATGTGCGCTGCGCGTGCCCAGACGCCTACACCGGCATCCTCTGTGAGAAGCTACGGTGCGAAGAGGCGGGCAGCTGTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR GCA 90 bp | GGTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTaGTTCCCCACAGCACAGGCCTGTCGGAGGGCTGGGTGTGACCCC | + |
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Preference number: 1 (lower is better) Translates to: GVRVFYVSGNRLGCV*FPTAQACRRAGCDP Trigger: GGGGTCACACCCAGCCCTCCGACAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR CCA 90 bp | TCTGGGCACGCGCAGCGCACATTGTTCTGGCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTGTCGCAGACATTAGCTATGCACACA | + |
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Preference number: 1 (lower is better) Translates to: SGHAQRTLFWQVPPF*QCRSSLSQTLAMHT Trigger: TGTGTGCATAGCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTGCGCGTGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR CCA 90 bp | GTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTaGGTTGTGTTTGCTTCCCCACAGCACAGGCCTGTCGGAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VLEWVCVFSMSVAIA*VVFASPQHRPVGGL Trigger: CAGCCCTCCGACAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACACCCACTCCAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CCA 90 bp | TTCCTTATACCCACAATGCACCTGACAGCGAAGAATGCTTTTATTTaGTTGGCCCACACACTGAGCAGAGCGGTACTAGGGTGCACCACG | + |
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Preference number: 1 (lower is better) Translates to: FLIPTMHLTAKNAFI*LAHTLSRAVLGCTT Trigger: CGTGGTGCACCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGTGGGTATAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CCA 90 bp | GGCTTAGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTaGGTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: GLVQLGPLLLYTVLE*VCVFSMSVAIAWVV Trigger: CACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACTAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR GCA 90 bp | GTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTaGGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: VQLGPLLLYTVLEWV*VFSMSVAIAWVVFA Trigger: AGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR GCA 90 bp | TGTAACAGATTTCCTTATACCCACAATGCACCTGACAGCGAAGAATaGTTTTATTTGGTTGGCCCACACACTGAGCAGAGCGGTACTAGG | + |
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Preference number: 1 (lower is better) Translates to: CNRFPYTHNAPDSEE*FYLVGPHTEQSGTR Trigger: CCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGTGGGTATAAGGAAATCTGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CCA 90 bp | GCTGTTGGTTTGAATAACAAACATCCAATCGACTTGGACGTGGGGTaGCAGGCAGAGCAGGAATTACCTGCTTACCTTTTATTGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: AVGLNNKHPIDLDVG*QAEQELPAYLLLPS Trigger: AGAAGGCAATAAAAGGTAAGCAGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTTATTCAAACCAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR TCA 90 bp | ATGATGAACAGTCTCAACTCCGATGTGCGATGTGCTGTCCGGTTCTaGGAGATATGGCTTAGTTCAGTTAGGCCCTCTTCTTTTATACAC | + |
|
Preference number: 1 (lower is better) Translates to: MMNSLNSDVRCAVRF*EIWLSSVRPSSFIH Trigger: GTGTATAAAAGAAGAGGGCCTAACTGAACTAAGCCATATCTCTCAGAACCGGACAGCACATCGCACATCGGAGTTGAGACTGTTCATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR TCA 90 bp | GCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTaGCTGTGTTCAGTCCACACAAAAATCAGTGACGTGACTGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: ASDHQSVFLVIKVVS*LCSVHTKISDVTGK Trigger: TTTCCCAGTCACGTCACTGATTTTTGTGTGGACTGAACACAGTCAGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CCA 90 bp | ATTGCTAATCACTCAATTTCCCTGCTGCTGTCCTGGTTCCCCAGGTaGCCTCTTATGATACTCCATGTAAACACTGTATTTGGAAGGATA | + |
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Preference number: 1 (lower is better) Translates to: IANHSISLLLSWFPR*PLMILHVNTVFGRI Trigger: TATCCTTCCAAATACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAGCAGGGAAATTGAGTGATTAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CCA 90 bp | ATTCAAAGTCAAATTGCTAATCACTCAATTTCCCTGCTGCTGTCCTaGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTA | + |
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Preference number: 1 (lower is better) Translates to: IQSQIANHSISLLLS*FPRWPLMILHVNTV Trigger: TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAGCAGGGAAATTGAGTGATTAGCAATTTGACTTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR TCA 90 bp | TCAGAATTAGCTGTCGGAATCCCACGTATTGAATTGTGCAGCGTCTaGTTCCTGATCATTGTGACAAAGCTGTGTGACTGGATAATGATA | + |
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Preference number: 1 (lower is better) Translates to: SELAVGIPRIELCSV*FLIIVTKLCDWIMI Trigger: TATCATTATCCAGTCACACAGCTTTGTCACAATGATCAGGAATCAGACGCTGCACAATTCAATACGTGGGATTCCGACAGCTAATTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR TCA 90 bp | AGGCCTTCATTAAATTTCAGAATTAGCTGTCGGAATCCCACGTATTaGATTGTGCAGCGTCTGATTCCTGATCATTGTGACAAAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: RPSLNFRISCRNPTY*IVQRLIPDHCDKAV Trigger: CACAGCTTTGTCACAATGATCAGGAATCAGACGCTGCACAATTCAATACGTGGGATTCCGACAGCTAATTCTGAAATTTAATGAAGGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR GCA 90 bp | TATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTaGATGACGAAACGAAACAAAACCAAAGAGGACCAAAAACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: YSLMPARSLPLQRNL*MTKRNKTKEDQKLK Trigger: TTTGAGTTTTTGGTCCTCTTTGGTTTTGTTTCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR TCA 90 bp | GACTTCATTGTCTTTAATCTTCTGGTTTGGCCTCATAATTATTTCTaGTTCCAAGAGATGCCATTGCTGACACATTTGTCACCTGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: DFIVFNLLVWPHNYF*FQEMPLLTHLSPAG Trigger: CCCTGCAGGTGACAAATGTGTCAGCAATGGCATCTCTTGGAATCAGAAATAATTATGAGGCCAAACCAGAAGATTAAAGACAATGAAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CCA 90 bp | TATTGTCCCACCAAGTCATGTAGGACTTCATTGTCTTTAATCTTCTaGTTTGGCCTCATAATTATTTCTGATTCCAAGAGATGCCATTGC | + |
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Preference number: 1 (lower is better) Translates to: YCPTKSCRTSLSLIF*FGLIIISDSKRCHC Trigger: GCAATGGCATCTCTTGGAATCAGAAATAATTATGAGGCCAAACCAGAAGATTAAAGACAATGAAGTCCTACATGACTTGGTGGGACAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR GCA 90 bp | GCCGGTGTAGGCGTCTGGGCACGCGCAGCGCACATTGTTCTGGCAGGTCCCTCCCATAACTCACAGTGCTaGCCTCTAGTGTTGTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: AGVGVWARAAHIVLAGPSHNSQC*PLVLCL Trigger: TAAACACAACACTAGAGGGCAGCACTGTGAGTTATG...GGAGGGACCTGCCAGAACAATGTGCGCTGCGCGTGCCCAGACGCCTACACCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTCGCTTGGGTTGTGTTTaGTTCCCCACAGCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: QGYDWLALWRGLLHVCITRLGCV*FPTAQA Trigger: GGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCG...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGCTGGCACTGGGACCGCAGTGCTGCTAAAATATACAGGGGTATGACTGGCCGCTTGGGTTGTGTTTaGTTCCCCACAGCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VSWHWDRSAAKIYRGMTGRLGCV*FPTAQA Trigger: GGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCG...GCCAGTCATACCCCTGTATATTTTAGCAGCACTGCGGTCCCAGTGCCAGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 90 bp | TGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTaGGGTTGTGTTTGCTTCCCCACAGCACAGGCCTGTCGGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CVGVGVRVFYVSGNR*GCVCFPTAQACRRA Trigger: AGCCCTCCGACAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACACCCACTCCAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: QGYDWLALWRGLLHVCITQVPPF*QCRSSL Trigger: CAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTG...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGCCATTGCTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGCCAGCACGCTCGTTaGCCTTACAGAGAAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: RDAIADTFVTCRVAVCRDCQHAR*PYREIS Trigger: AGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCA...ATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAGCAATGGCATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAACATCCAATCGACTTGGACGTGGGGTGGCAGGCAGAGCAGGAATTACCTAGACATTGTTCCCCCTaGTTCCCCCTGGTTCAAGCG | + |
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Preference number: 2 (lower is better) Translates to: NKHPIDLDVGWQAEQELPRHCSP*FPLVQA Trigger: CGCTTGAACCAGGGGGAAGCAGGGGGAACAATGTCT...AGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 90 bp | CATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATaGTTTCAGCCCCTCCAAAAACTTTGCAGTGATTCTCCACCCGCC | + |
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Preference number: 2 (lower is better) Translates to: HLSPAGWQCAGIEHT*FQPLQKLCSDSPPA Trigger: GGCGGGTGGAGAATCACTGCAAAGTTTTTGGAGGGGCTGAAACAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTCCTGGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTAATACAGGGGTATGACTaGCTTGCGCTTTGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LLSWFPRWPLMILHVNTVIQGYD*LALWRG Trigger: CCCCCTCCAAAGCGCAAGCCAGTCATACCCCTGTAT...TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 90 bp | CTTATACCCACAATGCACCTGACAGCGAAGAATGCTTTTATTTGGTaGGCCCACACACTGAGCAGAGCGGTACTAGGGTGCACCACGGTA | + |
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Preference number: 2 (lower is better) Translates to: LIPTMHLTAKNAFIW*AHTLSRAVLGCTTV Trigger: TACCGTGGTGCACCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGTGGGTATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR GCA 90 bp | AACAAACATCCAATCGACTTGGACGTGGGGTGGCAGGCAGAGCAGGAATTACCTATCACTCAATTTCCCTaGTGCTGTCCTGGTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: NKHPIDLDVGWQAEQELPITQFP*CCPGSP Trigger: TGGGGAACCAGGACAGCAGCAGGGAAATTGAGTGAT...AGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR CCA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATATACAGGGGTATGACTaGCTTGCGCTTTGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PIFFDASTLVALTEKSLHIQGYD*LALWRG Trigger: CCCCCTCCAAAGCGCAAGCCAGTCATACCCCTGTAT...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 90 bp | TTTCCTTATACCCACAATGCACCTGACAGCGAAGAATGCTTTTATTaGGTTGGCCCACACACTGAGCAGAGCGGTACTAGGGTGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: FPYTHNAPDSEECFY*VGPHTEQSGTRVHH Trigger: GTGGTGCACCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGTGGGTATAAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR TCA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATGTGCAGAAGCATTTCTaGAGTAGCCCAGCCTGCATA | + |
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Preference number: 2 (lower is better) Translates to: PIFFDASTLVALTEKSLHVQKHF*SSPACI Trigger: TATGCAGGCTGGGCTACTTCAGAAATGCTTCTGCAC...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR-3UTR GCA 90 bp | GCAACAGCTGCCAATTCCTCTGGAGTCAATGATGAACAGTCTCAACTCCGATGTCTGCATAACTCACAGTaGTGCCCTCTAGTGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ATAANSSGVNDEQSQLRCLHNSQ*CPLVLC Trigger: ACACAACACTAGAGGGCAGCACTGTGAGTTATGCAG...ACATCGGAGTTGAGACTGTTCATCATTGACTCCAGAGGAATTGGCAGCTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGTCCTGGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTAGCTGGCAATGAGATTTaGAGTGAGAATAGCAACAGC | + |
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Preference number: 2 (lower is better) Translates to: LLSWFPRWPLMILHVNTVAGNEI*SENSNS Trigger: GCTGTTGCTATTCTCACTGCAAATCTCATTGCCAGC...TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCGCAGACATTAGCTATGCACACATTCTCATCGTCCAGCTGTGCAGAAGCTATAACTGCACCGATTaGAGTGGCCGAAGCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: IVADISYAHILIVQLCRSYNCTD*SGRSIH Trigger: GTGAATGCTTCGGCCACTCCAATCGGTGCAGTTATA...GCTTCTGCACAGCTGGACGATGAGAATGTGTGCATAGCTAATGTCTGCGACAAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCTCATATTTTGCAGACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCATACAGGGGTATGACTaGCTTGCGCTTTGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: IVSYFADVVQASDHQSVFIQGYD*LALWRG Trigger: CCCCCTCCAAAGCGCAAGCCAGTCATACCCCTGTAT...GAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAGACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGATGCCATTGCTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATATCAATCCGTCTTCCTaGTTATTAAAGTTGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RDAIADTFVTCRVAVCRDINPSS*LLKLSA Trigger: AGCTGACAACTTTAATAACCAGGAAGACGGATTGAT...ATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAGCAATGGCATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCCAAAAATCAGTGACGTaGCTGGGAAACTGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VVQASDHQSVFLVIKVVSQKSVT*LGNCWV Trigger: CACCCAGCAGTTTCCCAGTCACGTCACTGATTTTTG...GCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR GCA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATGAGAATAGCAACAGCTaGCAATTCCTCTGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: PIFFDASTLVALTEKSLHENSNS*QFLWSQ Trigger: TTGACTCCAGAGGAATTGGCAGCTGTTGCTATTCTC...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 90 bp | AGATATGGCTTAGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTaGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RYGLVQLGPLLLYTV*EWVCVFSMSVAIAW Trigger: CCAAGCGATTGCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACTAAGCCATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAATATGGCAGCTTGTAACAGATTTCCTTATACCCACAATGCACCTGACAGCGAGAATAGCAACAGCTaGCAATTCCTCTGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: ANMAACNRFPYTHNAPDSENSNS*QFLWSQ Trigger: TTGACTCCAGAGGAATTGGCAGCTGTTGCTATTCTC...GCTGTCAGGTGCATTGTGGGTATAAGGAAATCTGTTACAAGCTGCCATATTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGTCTCATATTTTGCAGACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCGTGTTGGAGTGGGTGTaGGTGTTTTCTATGTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: IVSYFADVVQASDHQSVFVLEWV*VFSMSV Trigger: CACTGACATAGAAAACACGCACACCCACTCCAACAC...GAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAGACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCGCTGGCAATGAGATTTaGAGTGAGAATAGCAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: VVQASDHQSVFLVIKVVSAGNEI*SENSNS Trigger: GCTGTTGCTATTCTCACTGCAAATCTCATTGCCAGC...GCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 90 bp | CACTTGCTATATGTAAACCGATATTCTTTGATGCCAGCACGCTCGTaGCCCTTACAGAGAAATCTCTGCATGACGAAACGAAACAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: HLLYVNRYSLMPARS*PLQRNLCMTKRNKT Trigger: GGTTTTGTTTCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATATAGCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCGTCTTAAGAAACGGCCATACAATTTCCTGATAACATTTCTGCAGGAATTTCCTCCATTCTGGCAGTaGAGGAGCTCATTGTCGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FRLKKRPYNFLITFLQEFPPFWQ*RSSLSQ Trigger: CTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGG...AAATTCCTGCAGAAATGTTATCAGGAAATTGTATGGCCGTTTCTTAAGACGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGTCAGTCTTTGCTGATTCGAATTAGATACATTAACAGATTGTCTGGTAACCAGCGCACATTGTTCTaGCAGGTCCCTCCATTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ISQSLLIRIRYINRLSGNQRTLF*QVPPFW Trigger: CCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTG...GTTACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTGTTTTCTATGTCAGTaGCAATCGCTTGGGTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VVQASDHQSVFLVIKVVSCFLCQ*QSLGLC Trigger: ACACAACCCAAGCGATTGCCACTGACATAGAAAACA...GCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CCA 90 bp | AACGAGGCTTCTGACCTAATACTGTCATTGGTTATTGTCCCACCAAGTCATGTATACACTGTGTTGGAGTaGGTGTGCGTGTTTTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: NEASDLILSLVIVPPSHVYTVLE*VCVFSM Trigger: CATAGAAAACACGCACACCCACTCCAACACAGTGTA...TACATGACTTGGTGGGACAATAACCAATGACAGTATTAGGTCAGAAGCCTCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CCA 90 bp | TATGTAAACCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATTACACTGTGTTGGAGTaGGTGTGCGTGTTTTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: YVNRYSLMPARSLPLQRNYTVLE*VCVFSM Trigger: CATAGAAAACACGCACACCCACTCCAACACAGTGTA...ATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR TCA 90 bp | AACGAGGCTTCTGACCTAATACTGTCATTGGTTATTGTCCCACCAAGTCATGTAATTAAAGTTGTCAGCTaGCTGTGTTCAGTCCACACA | + |
|
Preference number: 2 (lower is better) Translates to: NEASDLILSLVIVPPSHVIKVVS*LCSVHT Trigger: TGTGTGGACTGAACACAGTCAGCTGACAACTTTAAT...TACATGACTTGGTGGGACAATAACCAATGACAGTATTAGGTCAGAAGCCTCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 90 bp | TTTGGTGGAATCTTATTACACTTGCTATATGTAAACCGATATTCTTaGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATG | + |
|
Preference number: 2 (lower is better) Translates to: FGGILLHLLYVNRYS*MPARSLPLQRNLCM Trigger: CATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATATAGCAAGTGTAATAAGATTCCACCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTATGATACTCCATGTAAACACTGTATTTGGAAGGATACATAGATCGGCATCCTGTTTTCTATGTCAGTaGCAATCGCTTGGGTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LMILHVNTVFGRIHRSASCFLCQ*QSLGLC Trigger: ACACAACCCAAGCGATTGCCACTGACATAGAAAACA...GGATGCCGATCTATGTATCCTTCCAAATACAGTGTTTACATGGAGTATCATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTATGATACTCCATGTAAACACTGTATTTGGAAGGATACATAGATCGGCATCCAAGAATGCTTTTATTTaGTTGGCCCACACACTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LMILHVNTVFGRIHRSASKNAFI*LAHTLS Trigger: GCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTT...GGATGCCGATCTATGTATCCTTCCAAATACAGTGTTTACATGGAGTATCATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCGTCTTAAGAAACGGCCATACAATTTCCTGATAACATTTCTGCAGGAATTTGCTGGCAATGAGATTTaGAGTGAGAATAGCAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: FRLKKRPYNFLITFLQEFAGNEI*SENSNS Trigger: GCTGTTGCTATTCTCACTGCAAATCTCATTGCCAGC...AAATTCCTGCAGAAATGTTATCAGGAAATTGTATGGCCGTTTCTTAAGACGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CCA 90 bp | AACGAGGCTTCTGACCTAATACTGTCATTGGTTATTGTCCCACCAAGTCATGTACGAATGTTTTTAGGTTaGTTGATCAGTTTGTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NEASDLILSLVIVPPSHVRMFLG*LISLFS Trigger: GGAAAACAAACTGATCAACCAACCTAAAAACATTCG...TACATGACTTGGTGGGACAATAACCAATGACAGTATTAGGTCAGAAGCCTCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 90 bp | AATACTGTCATTGGTTATTGTCCCACCAAGTCATGTAGGACTTCATaGTCTTTAATCTTCTGGTTTGGCCTCATAATTATTTCTGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: NTVIGYCPTKSCRTS*SLIFWFGLIIISDS Trigger: GGAATCAGAAATAATTATGAGGCCAAACCAGAAGATTAAAGACAATGAAGTCCTACATGACTTGGTGGGACAATAACCAATGACAGTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTATGATACTCCATGTAAACACTGTATTTGGAAGGATACATAGATCGGCATCCCGAATGTTTTTAGGTTaGTTGATCAGTTTGTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LMILHVNTVFGRIHRSASRMFLG*LISLFS Trigger: GGAAAACAAACTGATCAACCAACCTAAAAACATTCG...GGATGCCGATCTATGTATCCTTCCAAATACAGTGTTTACATGGAGTATCATAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR GCA 72 bp | GCGGGGGTGCTCCCTGGCCGGATTCGGAGCCACAGCTaGCCGCCTCTTCGCACCGTAGCTTCTCACAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AGVLPGRIRSHS*PPLRTVASHRG Trigger: TCCTCTGTGAGAAGCTACGGTGCGAAGAGGCGGGCAGCTGTGGCTCCGAATCCGGCCAGGGAGCACCCCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR GCA 72 bp | TGCCCGCCTCTTCGCACCGTAGCTTCTCACAGAGGATaGCGGTGTAGGCGTCTGGGCACGCGCAGCGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: CPPLRTVASHRG*RCRRLGTRSAH Trigger: ATGTGCGCTGCGCGTGCCCAGACGCCTACACCGGCATCCTCTGTGAGAAGCTACGGTGCGAAGAGGCGGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR CCA 72 bp | GCGCAGCGCACATTGTTCTGGCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTGTCGCAGACATTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AQRTLFWQVPPF*QCRSSLSQTLA Trigger: AGCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATTGAGGGGTATGACTGGCTaGCGCTTTGGAGGGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTHLSPAGWQCAGIEHTLRGMTG*RFGGGC Trigger: ACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCT...CAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTAACATCGCTTGGGTTGTGTTaGCTTCCCCACAGCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GMTGLRFGGGCYTCVSLTSLGLC*LPHSTG Trigger: GCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGA...TGTTAGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTAACATGGCAATCGCTTGGGTaGTGTTTGCTTCCCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: GMTGLRFGGGCYTCVSLTWQSLG*CLLPHS Trigger: GCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCA...TGTTAGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATTGTGGCAATCGCTTGGGTaGTGTTTGCTTCCCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTHLSPAGWQCAGIEHTLWQSLG*CLLPHS Trigger: GCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCA...CAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | CCCACAATGCACCTGACAGCGAAGAATGCTTTTATTTaGTTGGCCCACACACTGAGCAGAGCGGTACTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PTMHLTAKNAFI*LAHTLSRAVLG Trigger: CCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | TCTAACCACTCTTGTGAAGTGGACGTGAGCTGGCACTaGGACCGCAGTGCTGCTAAAATATACAGGGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: SNHSCEVDVSWH*DRSAAKIYRGM Trigger: CATACCCCTGTATATTTTAGCAGCACTGCGGTCCCAGTGCCAGCTCACGTCCACTTCACAAGAGTGGTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | AGTCTCAACTCCGATGTGCGATGTGCTGTCCGGTTCTaGGAGATATGGCTTAGTTCAGTTAGGCCCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLNSDVRCAVRF*EIWLSSVRPSS Trigger: AGAAGAGGGCCTAACTGAACTAAGCCATATCTCTCAGAACCGGACAGCACATCGCACATCGGAGTTGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR GCA 72 bp | CAATCCGCAATCAGCTCTGCAGCTGGCAATGAGATTTaGAGTGAGAATAGCAACAGCTGCCAATTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QSAISSAAGNEI*SENSNSCQFLW Trigger: CCAGAGGAATTGGCAGCTGTTGCTATTCTCACTGCAAATCTCATTGCCAGCTGCAGAGCTGATTGCGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | TTTTCCTCTAACCACTCTTGTGAAGTGGACGTGAGCTaGCACTGGGACCGCAGTGCTGCTAAAATATACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FSSNHSCEVDVS*HWDRSAAKIYR Trigger: CCTGTATATTTTAGCAGCACTGCGGTCCCAGTGCCAGCTCACGTCCACTTCACAAGAGTGGTTAGAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTACAGAGCAACGTTCACTAAAGCACAGGTTGGAAGGGATTTGGGGGTCGGGGGGTTGGTTGATCAGTTaGTTTTCCGTCTTTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VTEQRSLKHRLEGIWGSGGWLIS*FSVFPL Trigger: AAGAGGAAAGACGGAAAACAAACTGATCAACCAACC...CCCCGACCCCCAAATCCCTTCCAACCTGTGCTTTAGTGAACGTTGCTCTGTAAC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | TTCTCTTTTCCTCTAACCACTCTTGTGAAGTGGACGTaGGCTGGCACTGGGACCGCAGTGCTGCTAAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: FSFPLTTLVKWT*AGTGTAVLLKY Trigger: ATATTTTAGCAGCACTGCGGTCCCAGTGCCAGCTCACGTCCACTTCACAAGAGTGGTTAGAGGAAAAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | ACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTaGACATACATTGTTTCAGCCCCTCCAAAAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TFVTCRVAVCRD*TYIVSAPPKTL Trigger: CAAAGTTTTTGGAGGGGCTGAAACAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | GCTGTCGGAATCCCACGTATTGAATTGTGCAGCGTCTaGTTCCTGATCATTGTGACAAAGCTGTGTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: AVGIPRIELCSV*FLIIVTKLCDW Trigger: CCAGTCACACAGCTTTGTCACAATGATCAGGAATCAGACGCTGCACAATTCAATACGTGGGATTCCGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR GCA 72 bp | GGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTaGGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GPLLLYTVLEWV*VFSMSVAIAWV Trigger: AACCCAAGCGATTGCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATGACGAAACGACTTTTATACACTGTGTaGGAGTGGGTGTGCGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LMPARSLPLQRNLCMTKRLLYTV*EWVCVF Trigger: AAACACGCACACCCACTCCAACACAGTGTATAAAAG...TCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | AACAAACATCCAATCGACTTGGACGTGGGGTGGCAGGCAGAGCAGGAATTACCTGGTTGGTTGATCAGTTaGTTTTCCGTCTTTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NKHPIDLDVGWQAEQELPGWLIS*FSVFPL Trigger: AAGAGGAAAGACGGAAAACAAACTGATCAACCAACC...AGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | AACAAACATCCAATCGACTTGGACGTGGGGTGGCAGGCAGAGCAGGAATTACCTGACCTAATACTGTCATaGGTTATTGTCCCACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NKHPIDLDVGWQAEQELPDLILS*VIVPPS Trigger: ACTTGGTGGGACAATAACCAATGACAGTATTAGGTC...AGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAACAGCTGCCAATTCCTCTGGAGTCAATGATGAACAGTCTCAACTCCGATGTCTTTTATACACTGTGTaGGAGTGGGTGTGCGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ATAANSSGVNDEQSQLRCLLYTV*EWVCVF Trigger: AAACACGCACACCCACTCCAACACAGTGTATAAAAG...ACATCGGAGTTGAGACTGTTCATCATTGACTCCAGAGGAATTGGCAGCTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | CTCATAATTATTTCTGATTCCAAGAGATGCCATTGCTaGCACATTTGTCACCTGCAGGGTGGCAGTGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LIIISDSKRCHC*HICHLQGGSVP Trigger: CGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAGCAATGGCATCTCTTGGAATCAGAAATAATTATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR GCA 72 bp | TTTCCTTATACCCACAATGCACCTGACAGCGAAGAATaGTTTTATTTGGTTGGCCCACACACTGAGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FPYTHNAPDSEE*FYLVGPHTEQS Trigger: GCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGTGGGTATAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR GCA 72 bp | ATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTaGATGACGAAACGAAACAAAACCAAAGAGGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: MPARSLPLQRNL*MTKRNKTKEDQ Trigger: TTGGTCCTCTTTGGTTTTGTTTCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | CAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTaGGTGTGCGTGTTTTCTATGTCAGTGGCAATCGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLGPLLLYTVLE*VCVFSMSVAIA Trigger: AGCGATTGCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | CACTCAATTTCCCTGCTGCTGTCCTGGTTCCCCAGGTaGCCTCTTATGATACTCCATGTAAACACTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: HSISLLLSWFPR*PLMILHVNTVF Trigger: AAATACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAGCAGGGAAATTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | CAAATTGCTAATCACTCAATTTCCCTGCTGCTGTCCTaGTTCCCCAGGTGGCCTCTTATGATACTCCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: QIANHSISLLLS*FPRWPLMILHV Trigger: TACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAGCAGGGAAATTGAGTGATTAGCAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTTGCTGCCCTCTAGTGTaGTGTTTACAGCTCACGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSKLVTINPSSWLLKLSACCPLV*CLQLTQ Trigger: TTGCGTGAGCTGTAAACACAACACTAGAGGGCAGCA...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTTCAACCAACAAGGGTTACAGAGCAACGTTCACTAAAGCACAGGTTGGAACAGTGCAGGAGCTCATaGTCGCAGACATTAGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: IFQPTRVTEQRSLKHRLEQCRSS*SQTLAM Trigger: CATAGCTAATGTCTGCGACAATGAGCTCCTGCACTG...TTCCAACCTGTGCTTTAGTGAACGTTGCTCTGTAACCCTTGTTGGTTGAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATTGGCGAATGTTTTTAGGTaGGTTGATCAGTTTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LTHLSPAGWQCAGIEHTLANVFR*VDQFVF Trigger: GAAAACAAACTGATCAACCAACCTAAAAACATTCGC...CAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | CAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATaGCGAAACGAAACAAAACCAAAGAGGACCAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QHARCPYREISA*RNETKPKRTKN Trigger: GTTTTTGGTCCTCTTTGGTTTTGTTTCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR GCA 72 bp | AAAATCAGTGACGTGACTGGGAAACTGCTGGGTGGTTaGTCCTTTCGTCTTAAGAAACGGCCATACAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: KISDVTGKLLGG*SFRLKKRPYNF Trigger: GAAATTGTATGGCCGTTTCTTAAGACGAAAGGAGCAACCACCCAGCAGTTTCCCAGTCACGTCACTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | ACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTaGTTATTAAAGTTGTCAGCTGACTGTGTTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLSKLVTINPSS*LLKLSADCVQS Trigger: GGACTGAACACAGTCAGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CCA 72 bp | TTGAATAACAAACATCCAATCGACTTGGACGTGGGGTaGCAGGCAGAGCAGGAATTACCTGCTTACCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LNNKHPIDLDVG*QAEQELPAYLL Trigger: TAAAAGGTAAGCAGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTTATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTCTCATATTTTGCAGACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCGAAGAATGCTTTTATTaGGTTGGCCCACACACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IVSYFADVVQASDHQSVFEECFY*VGPHTE Trigger: CTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTC...GAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAGACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGTAAACCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATGAAGAATGCTTTTATTaGGTTGGCCCACACACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YVNRYSLMPARSLPLQRNEECFY*VGPHTE Trigger: CTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTC...ATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | TTAAATTTCAGAATTAGCTGTCGGAATCCCACGTATTaGATTGTGCAGCGTCTGATTCCTGATCATTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LNFRISCRNPTY*IVQRLIPDHCD Trigger: GTCACAATGATCAGGAATCAGACGCTGCACAATTCAATACGTGGGATTCCGACAGCTAATTCTGAAATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | TTTCCCTATTTCTTATATCAAAAGATGCTGTTGGTTTaGATAACAAACATCCAATCGACTTGGACGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FPYFLYQKMLLV*ITNIQSTWTWG Trigger: ACCCCACGTCCAAGTCGATTGGATGTTTGTTATTCAAACCAACAGCATCTTTTGATATAAGAAATAGGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR TCA 72 bp | AGAGGACCAAAAACTCAAACATCAGTCAGTCTTTGCTaGTTCGAATTAGATACATTAACAGATTGTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: RGPKTQTSVSLC*FELDTLTDCLV Trigger: TACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGATGTTTGAGTTTTTGGTCCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR GCA 72 bp | ATGATAAAGTGCACCATTGCCAGAAATAACACAGTCTaGCTTTGGTTTGTGCTAATAAACTATAAGACAACT | + |
|
Preference number: 3 (lower is better) Translates to: MIKCTIARNNTV*LWFVLINYKTT Trigger: AGTTGTCTTATAGTTTATTAGCACAAACCAAAGGCAGACTGTGTTATTTCTGGCAATGGTGCACTTTATCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | GCCGGTGTAGGCGTCTGGGCACGCGCAGCGCACATTGTTCTGGCAGGTCCCTCCCATGGAGGCAGTCTGTaGCATAATACTGATAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGVGVWARAAHIVLAGPSHGGSL*HNTDRA Trigger: AGCCCTATCAGTATTATGCCACAGACTGCCTCCATG...GGAGGGACCTGCCAGAACAATGTGCGCTGCGCGTGCCCAGACGCCTACACCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| CDS-3UTR GCA 90 bp | CTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCACAGCACAGGCCTGCGGGTCCATGTGGAATaGATGGAGGCAGTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCQWQSLGLCLLPHSTGLRVHVE*MEAVCG Trigger: GCCACAGACTGCCTCCATGCATTCCACATGGACCCG...CAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTGGGGATACAGGTGTTTaGGGTGCCTTTGGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGYDWLALWRGLLHVCITGDTGV*GAFGDG Trigger: CCCATCCCCAAAGGCACCGCAAACACCTGTATCCCC...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | AACAAACATCCAATCGACTTGGACGTGGGGTGGCAGGCAGAGCAGGAATTACCTATTCGGAGCCACAGCTaGCCGCCTCTTCGCACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKHPIDLDVGWQAEQELPIRSHS*PPLRTV Trigger: TACGGTGCGAAGAGGCGGGCAGCTGTGGCTCCGAAT...AGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTGGCACTGGGACCGCAGTGCTGCTAAAATATACAGGGGTATGACTGGCCAGCGCACATTGTTCTaGCAGGTCCCTCCATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSWHWDRSAAKIYRGMTGQRTLF*QVPPFW Trigger: CCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTG...GCCAGTCATACCCCTGTATATTTTAGCAGCACTGCGGTCCCAGTGCCAGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | TGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTaGCTTCCCCACAGCACAGGCCTGTCGGAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFLCQWQSLGLC*LPHSTGLSEGW Trigger: CCAGCCCTCCGACAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | GGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTAACAGGGGATACAGGTGTTTaGGGTGCCTTTGGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMTGLRFGGGCYTCVSLTGDTGV*GAFGDG Trigger: CCCATCCCCAAAGGCACCGCAAACACCTGTATCCCC...TGTTAGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATGCCATTGCTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATGTCACCCACAGGGCATaGATCGACAGGAATCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDAIADTFVTCRVAVCRDVTHRA*IDRNLD Trigger: GTCAAGATTCCTGTCGATCCATGCCCTGTGGGTGAC...ATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAGCAATGGCATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATCAGCTCAGGAGGGTGTaGCAGTTCAGGGGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PIFFDASTLVALTEKSLHQLRRV*QFRGTR Trigger: GCGAGTACCCCTGAACTGGCACACCCTCCTGAGCTG...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCAACTTGGTCATGTCCGTaGATTCCGGCTGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVFSMSVAIAWVVFASPTWSCP*IPAGRL Trigger: CAGCCTGCCAGCCGGAATCCACGGACATGACCAAGT...TGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCACAGCACAGGCCTGTGCACAGAAGGACTCTaGAGGGTCTCCACAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCQWQSLGLCLLPHSTGLCTEGL*RVSTGN Trigger: ATTACCTGTGGAGACCCTCCAGAGTCCTTCTGTGCA...CAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | TGGCAGGTCCCTCCATTCTGGCAGTGCAGGAGCTCATaGTCGCAGACATTAGCTATGCACACATTCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: WQVPPFWQCRSS*SQTLAMHTFSS Trigger: CGATGAGAATGTGTGCATAGCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| CDS-3UTR GCA 90 bp | GAGCCACAGCTGCCCGCCTCTTCGCACCGTAGCTTCTCACAGAGGATGCCGGTGTGTAATCCCAAACTTTaGCTTCTTCTGTGTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EPQLPASSHRSFSQRMPVCNPKL*LLLCKS Trigger: TGATTTACACAGAAGAAGGCAAAGTTTGGGATTACA...CACCGGCATCCTCTGTGAGAAGCTACGGTGCGAAGAGGCGGGCAGCTGTGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTAAACACGAAGTGGCATaGAGGTTGCACTTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGYDWLALWRGLLHVCITKHEVA*RLHLHL Trigger: AAGGTGCAAGTGCAACCTGCATGCCACTTCGTGTTT...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTGTCCTGGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTACCTCCATTCTGGCAGTaGAGGAGCTCATTGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSWFPRWPLMILHVNTVPPFWQ*RSSLSQ Trigger: CTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGG...TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTATTCGGAGCCACAGCTaGCCGCCTCTTCGCACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPSSFIHCVGVGVRVIRSHS*PPLRTV Trigger: TACGGTGCGAAGAGGCGGGCAGCTGTGGCTCCGAAT...AACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTTTCTCTAGGATCATTTaGTCTGGACGCCCCGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGYDWLALWRGLLHVCITFSRII*SGRPDS Trigger: TGAATCGGGGCGTCCAGACCAAATGATCCTAGAGAA...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCACAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVFSMSVAIAWVVFASPQVPPF*QCRSSL Trigger: CAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTG...TGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTCCTGGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTACAGCGCACATTGTTCTaGCAGGTCCCTCCATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSWFPRWPLMILHVNTVQRTLF*QVPPFW Trigger: CCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTG...TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR TCA 90 bp | GTTACAGAGCAACGTTCACTAAAGCACAGGTTGGAAGGGATTTGGGGGTCGGGGTCCAAGACCGTGTGCTaGGATAAATCCTTCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTEQRSLKHRLEGIWGSGSKTVC*DKSFTD Trigger: ATCCGTGAAGGATTTATCTCAGCACACGGTCTTGGA...CCCCGACCCCCAAATCCCTTCCAACCTGTGCTTTAGTGAACGTTGCTCTGTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | ATAGCAACAGCTGCCAATTCCTCTGGAGTCAATGATGAACAGTCTCAACTCCGACGGGTCCATGTGGAATaGATGGAGGCAGTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IATAANSSGVNDEQSQLRRVHVE*MEAVCG Trigger: GCCACAGACTGCCTCCATGCATTCCACATGGACCCG...TCGGAGTTGAGACTGTTCATCATTGACTCCAGAGGAATTGGCAGCTGTTGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | CTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATTGCCTGGTAGTTCTTCTTaGATTTCCCACAGTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTHLSPAGWQCAGIEHTLPGSSS*ISHSRD Trigger: GTCCCGACTGTGGGAAATGCAAGAAGAACTACCAGG...CAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTTCACTTTCAGATACTTaGTCATGTCCGTGGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGYDWLALWRGLLHVCITSLSDT*SCPWIP Trigger: CGGAATCCACGGACATGACCAAGTATCTGAAAGTGA...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATGCCATTGCTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATCAGACTGCCAAAATGTaGAGGGATGTCTTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RDAIADTFVTCRVAVCRDQTAKM*RDVFLQ Trigger: TTGAAGGAAGACATCCCTCCACATTTTGGCAGTCTG...ATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAGCAATGGCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PIFFDASTLVALTEKSLHQVPPF*QCRSSL Trigger: CAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTG...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | ACAATGCACCTGACAGCGAAGAATGCTTTTATTTGGTaGGCCCACACACTGAGCAGAGCGGTACTAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TMHLTAKNAFIW*AHTLSRAVLGC Trigger: GCACCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | ACCCACAATGCACCTGACAGCGAAGAATGCTTTTATTaGGTTGGCCCACACACTGAGCAGAGCGGTACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: THNAPDSEECFY*VGPHTEQSGTR Trigger: CCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATTCTTCGCTGTCAGGTGCATTGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | ATAGTCTCATATTTTGCAGACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCAGCTCAGGAGGGTGTaGCAGTTCAGGGGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IVSYFADVVQASDHQSVFQLRRV*QFRGTR Trigger: GCGAGTACCCCTGAACTGGCACACCCTCCTGAGCTG...GAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAGACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCAATTCCTCTGGAGTCAATGATGAACAGTCTCAACTCCGATGTGCGATGCACAGAAGGACTCTaGAGGGTCTCCACAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLPIPLESMMNSLNSDVRCTEGL*RVSTGN Trigger: ATTACCTGTGGAGACCCTCCAGAGTCCTTCTGTGCA...TCGCACATCGGAGTTGAGACTGTTCATCATTGACTCCAGAGGAATTGGCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCATCGTGGAGTACCCAGTaGAGTACTCTTCCGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVFSMSVAIAWVVFASPSWSTQ*STLPCK Trigger: TTTGCACGGAAGAGTACTCCACTGGGTACTCCACGA...TGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTGTTTGCGGTGCCTTTaGGGATGGGGAGGTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPSSFIHCVGVGVRVCLRCL*GWGGMS Trigger: GCTCATACCTCCCCATCCCCAAAGGCACCGCAAACA...AACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCAATTCCTCTGGAGTCAATGATGAACAGTCTCAACTCCGATGTGCGACGATACTGGAAATGCTaGGGATACAGGTGTTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPIPLESMMNSLNSDVRRYWKC*GYRCLR Trigger: CCGCAAACACCTGTATCCCCAGCATTTCCAGTATCG...TCGCACATCGGAGTTGAGACTGTTCATCATTGACTCCAGAGGAATTGGCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTCGCAGACATTAGCTATGCACACATTCTCATCGTCCAGCTGTGCAGAAGCCGATACTGGAAATGCTaGGGATACCTTCCTCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IVADISYAHILIVQLCRSRYWKC*GYLPRT Trigger: GGTGCGAGGAAGGTATCCCCAGCATTTCCAGTATCG...GCTTCTGCACAGCTGGACGATGAGAATGTGTGCATAGCTAATGTCTGCGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR CAA 72 bp | CCCAGCCTGCATAACTCACAGTGCTGCCCTCTAGTGTaGTGTTTACAGCTCACGCAAATGACTGTGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLHNSQCCPLV*CLQLTQMTVFS Trigger: GCTAAACACAGTCATTTGCGTGAGCTGTAAACACAACACTAGAGGGCAGCACTGTGAGTTATGCAGGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| 3UTR CAA 72 bp | CCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATaGTTTCAGCCCCTCCAAAAACTTTGCAGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGWQCAGIEHT*FQPLQKLCSDS Trigger: AGAATCACTGCAAAGTTTTTGGAGGGGCTGAAACAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTGTCCTGGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTATCCAAGACCGTGTGCTaGGATAAATCCTTCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSWFPRWPLMILHVNTVSKTVC*DKSFTD Trigger: ATCCGTGAAGGATTTATCTCAGCACACGGTCTTGGA...TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | AATGCTTTTATTTGGTTGGCCCACACACTGAGCAGAGCGGTACTAGGGTGCACCTTCCAAGTAGCAGACTaGCAAAATGTGGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NAFIWLAHTLSRAVLGCTFQVAD*QNVEGC Trigger: ACATCCCTCCACATTTTGGCAGTCTGCTACTTGGAA...GGTGCACCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCAAAACACGAAGTGGCATaGAGGTTGCACTTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVFSMSVAIAWVVFASPKHEVA*RLHLHL Trigger: AAGGTGCAAGTGCAACCTGCATGCCACTTCGTGTTT...TGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | CTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATTGTACCGATACTGGAAATaGTGGGGATACAGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTHLSPAGWQCAGIEHTLYRYWK*WGYRCL Trigger: CAAACACCTGTATCCCCAGCATTTCCAGTATCGGTA...CAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCCCTCCATTCTGGCAGTaGAGGAGCTCATTGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSFIHCVGVGVRVFYVSGPPFWQ*RSSLSQ Trigger: CTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGG...GCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | AACGAGGCTTCTGACCTAATACTGTCATTGGTTATTGTCCCACCAAGTCATGTAACTTGGTCATGTCCGTaGATTCCGGCTGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NEASDLILSLVIVPPSHVTWSCP*IPAGRL Trigger: CAGCCTGCCAGCCGGAATCCACGGACATGACCAAGT...TACATGACTTGGTGGGACAATAACCAATGACAGTATTAGGTCAGAAGCCTCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | TTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATGACGAAACGAAGAGTGATGTTAACCTaGAGAGGTTTGGGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMPARSLPLQRNLCMTKRRVMLT*RGLGYS Trigger: GGAGTACCCCAAACCTCTCCAGGTTAACATCACTCT...TCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTCCTGGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTATTCTCTAGGATCATTTaGTCTGGACGCCCCGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSWFPRWPLMILHVNTVFSRII*SGRPDS Trigger: TGAATCGGGGCGTCCAGACCAAATGATCCTAGAGAA...TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | CTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCACAGCACAGGCCTGTTATTTTGCTATTCGTaGAGTACCCAGTGGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LCQWQSLGLCLLPHSTGLLFCYS*STQWST Trigger: AGTACTCCACTGGGTACTCCACGAATAGCAAAATAA...CAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | CACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATaGAACATACATTGTTTCAGCCCCTCCAAAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HICHLQGGSVPG*NIHCFSPSKNF Trigger: AAAGTTTTTGGAGGGGCTGAAACAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | GATGCTGTTGGTTTGAATAACAAACATCCAATCGACTaGGACGTGGGGTGGCAGGCAGAGCAGGAATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: DAVGLNNKHPID*DVGWQAEQELP Trigger: AGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTTATTCAAACCAACAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTCCTGGTAGTTCTTCTTaGATTTCCCACAGTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPSSFIHCVGVGVRVPGSSS*ISHSRD Trigger: GTCCCGACTGTGGGAAATGCAAGAAGAACTACCAGG...AACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | GTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCGTCACCCACAGGGCATaGATCGACAGGAATCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VVQASDHQSVFLVIKVVSVTHRA*IDRNLD Trigger: GTCAAGATTCCTGTCGATCCATGCCCTGTGGGTGAC...GCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTCGTGGAGTACCCAGTaGAGTACTCTTCCGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPSSFIHCVGVGVRVSWSTQ*STLPCK Trigger: TTTGCACGGAAGAGTACTCCACTGGGTACTCCACGA...AACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTTGTTTGCGGTGCCTTTaGGGATGGGGAGGTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSKLVTINPSSWLLKLSACLRCL*GWGGMS Trigger: GCTCATACCTCCCCATCCCCAAAGGCACCGCAAACA...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR TCA 90 bp | ATAGCAACAGCTGCCAATTCCTCTGGAGTCAATGATGAACAGTCTCAACTCCGATCCAAGACCGTGTGCTaGGATAAATCCTTCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IATAANSSGVNDEQSQLRSKTVC*DKSFTD Trigger: ATCCGTGAAGGATTTATCTCAGCACACGGTCTTGGA...TCGGAGTTGAGACTGTTCATCATTGACTCCAGAGGAATTGGCAGCTGTTGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTAGAGTGATGTTAACCTaGAGAGGTTTGGGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPSSFIHCVGVGVRVRVMLT*RGLGYS Trigger: GGAGTACCCCAAACCTCTCCAGGTTAACATCACTCT...AACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTCATGGAGGCAGTCTGTaGCATAATACTGATAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPSSFIHCVGVGVRVHGGSL*HNTDRA Trigger: AGCCCTATCAGTATTATGCCACAGACTGCCTCCATG...AACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | CCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGTCGTGGAGTACCCAGTaGAGTACTCTTCCGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLLYTVLEWVCVFSMSVSWSTQ*STLPCK Trigger: TTTGCACGGAAGAGTACTCCACTGGGTACTCCACGA...CACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTGGCACTGGGACCGCAGTGCTGCTAAAATATACAGGGGTATGACTGGCTCTTTGATCTCGAAGTaGATTATTTTGCTATTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSWHWDRSAAKIYRGMTGSLISK*IILLFV Trigger: CACGAATAGCAAAATAATCCACTTCGAGATCAAAGA...GCCAGTCATACCCCTGTATATTTTAGCAGCACTGCGGTCCCAGTGCCAGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR TCA 90 bp | CAGCTGCCAATTCCTCTGGAGTCAATGATGAACAGTCTCAACTCCGATGTGCGAACGCAAACCTGTCTTTaGTCTCGAAGTGGATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QLPIPLESMMNSLNSDVRTQTCL*SRSGLF Trigger: AAATAATCCACTTCGAGATCAAAGACAGGTTTGCGT...TCGCACATCGGAGTTGAGACTGTTCATCATTGACTCCAGAGGAATTGGCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR GCA 90 bp | ATCAGTCAGTCTTTGCTGATTCGAATTAGATACATTAACAGATTGTCTGGTAACCAGCTCAGGAGGGTGTaGCAGTTCAGGGGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ISQSLLIRIRYINRLSGNQLRRV*QFRGTR Trigger: GCGAGTACCCCTGAACTGGCACACCCTCCTGAGCTG...GTTACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR GCA 90 bp | ATAGTCTCATATTTTGCAGACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCTACCGATACTGGAAATaGTGGGGATACCTTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IVSYFADVVQASDHQSVFYRYWK*WGYLPR Trigger: GCGAGGAAGGTATCCCCAGCATTTCCAGTATCGGTA...GAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAGACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTTGCACAGAAGGACTCTaGAGGGTCTCCACAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSKLVTINPSSWLLKLSACTEGL*RVSTGN Trigger: ATTACCTGTGGAGACCCTCCAGAGTCCTTCTGTGCA...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | CCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGAGAGTGATGTTAACCTaGAGAGGTTTGGGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLLYTVLEWVCVFSMSVRVMLT*RGLGYS Trigger: GGAGTACCCCAAACCTCTCCAGGTTAACATCACTCT...CACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 72 bp | AGGGTGCACCACGGTAGAGTAGCGAATGTTTTTAGGTaGGTTGATCAGTTTGTTTTCCGTCTTTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVHHGRVANVFR*VDQFVFRLSSW Trigger: CCAAGAGGAAAGACGGAAAACAAACTGATCAACCAACCTAAAAACATTCGCTACTCTACCGTGGTGCACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 72 bp | TCAGCCTGGAACGAGGCTTCTGACCTAATACTGTCATaGGTTATTGTCCCACCAAGTCATGTAGGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAWNEASDLILS*VIVPPSHVGLH Trigger: ATGAAGTCCTACATGACTTGGTGGGACAATAACCAATGACAGTATTAGGTCAGAAGCCTCGTTCCAGGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR GCA 90 bp | ATCAGTCAGTCTTTGCTGATTCGAATTAGATACATTAACAGATTGTCTGGTAACCGGGTCCATGTGGAATaGATGGAGGCAGTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISQSLLIRIRYINRLSGNRVHVE*MEAVCG Trigger: GCCACAGACTGCCTCCATGCATTCCACATGGACCCG...GTTACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTCGAAGTGGATTATTTTaGTATTCGTGGAGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVRPSSFIHCVGVGVRVRSGLF*YSWSTQ Trigger: CTGGGTACTCCACGAATAGCAAAATAATCCACTTCG...AACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | TTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATGACGAAACGAATTCACATGTCAGTTTaGTGTTGTCATACAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LMPARSLPLQRNLCMTKRIHMSV*CCHTNT Trigger: CGTGTTTGTATGACAACAGCAAACTGACATGTGAAT...TCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCTCACTTTCAGATACTTaGTCATGTCCGTGGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSFIHCVGVGVRVFYVSGSLSDT*SCPWIP Trigger: CGGAATCCACGGACATGACCAAGTATCTGAAAGTGA...GCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTCATGGAGGCAGTCTGTaGCATAATACTGATAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKLVTINPSSWLLKLSAHGGSL*HNTDRA Trigger: AGCCCTATCAGTATTATGCCACAGACTGCCTCCATG...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | TTAGTTCAGTTAGGCCCTCTTCTTTTATACACTGTGTaGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQLGPLLLYTV*EWVCVFSMSVA Trigger: TGCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGGGCCTAACTGAACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| 3UTR CAA 72 bp | TATGTAAACCGATATTCTTTGATGCCAGCACGCTCGTaGCCCTTACAGAGAAATCTCTGCATGACGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: YVNRYSLMPARS*PLQRNLCMTKR Trigger: TCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCATGTAATCCCAAACTTTaGCTTCTTCTGTGTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVFSMSVAIAWVVFASPCNPKL*LLLCKS Trigger: TGATTTACACAGAAGAAGGCAAAGTTTGGGATTACA...TGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | GACATTAGCTATGCACACATTCTCATCGTCCAGCTGTGCAGAAGCATTTCTGAACATCACACTCATTATTaGACATGTAAGGGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DISYAHILIVQLCRSISEHHTHY*TCKGCP Trigger: TGGGCAACCCTTACATGTGCAATAATGAGTGTGATG...TTCAGAAATGCTTCTGCACAGCTGGACGATGAGAATGTGTGCATAGCTAATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
||
| CDS-3UTR GCA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTTTCCAAGTAGCAGACTaGCAAAATGTGGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKLVTINPSSWLLKLSAFQVAD*QNVEGC Trigger: ACATCCCTCCACATTTTGGCAGTCTGCTACTTGGAA...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCCGAAGTGGATTATTTTaGTATTCGTGGAGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSFIHCVGVGVRVFYVSGRSGLF*YSWSTQ Trigger: CTGGGTACTCCACGAATAGCAAAATAATCCACTTCG...GCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATATTCACATGTCAGTTTaGTGTTGTCATACAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: PIFFDASTLVALTEKSLHIHMSV*CCHTNT Trigger: CGTGTTTGTATGACAACAGCAAACTGACATGTGAAT...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGACTGGATAATGATAAAGTGCACCATTGCCAGAAATAACACAGTCTGCTACCGATACTGGAAATaGTGGGGATACAGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCDWIMIKCTIARNNTVCYRYWK*WGYRCL Trigger: CAAACACCTGTATCCCCAGCATTTCCAGTATCGGTA...GCAGACTGTGTTATTTCTGGCAATGGTGCACTTTATCATTATCCAGTCACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CCA 90 bp | ATAGTCTCATATTTTGCAGACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCTCACTTTCAGATACTTaGTCATGTCCGTGGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IVSYFADVVQASDHQSVFSLSDT*SCPWIP Trigger: CGGAATCCACGGACATGACCAAGTATCTGAAAGTGA...GAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAGACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTCAGACTGCCAAAATGTaGAGGGATGTCTTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKLVTINPSSWLLKLSAQTAKM*RDVFLQ Trigger: TTGAAGGAAGACATCCCTCCACATTTTGGCAGTCTG...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | CTGTGTGACTGGATAATGATAAAGTGCACCATTGCCAGAAATAACACAGTCTGCCAGACTGCCAAAATGTaGAGGGATGTCTTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCDWIMIKCTIARNNTVCQTAKM*RDVFLQ Trigger: TTGAAGGAAGACATCCCTCCACATTTTGGCAGTCTG...GCAGACTGTGTTATTTCTGGCAATGGTGCACTTTATCATTATCCAGTCACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | GTGTGCGTGTTTTCTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCATCTTTGATCTCGAAGTaGATTATTTTGCTATTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVFSMSVAIAWVVFASPSLISK*IILLFV Trigger: CACGAATAGCAAAATAATCCACTTCGAGATCAAAGA...TGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAGAAAACACGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR TCA 90 bp | TCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGGCACGCAAACCTGTCTTTaGTCTCGAAGTGGATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSFIHCVGVGVRVFYVSGTQTCL*SRSGLF Trigger: AAATAATCCACTTCGAGATCAAAGACAGGTTTGCGT...GCCACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR GCA 90 bp | TATGTAAACCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCATCACACTCATTATTaGACATGTAAGGGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVNRYSLMPARSLPLQRNHHTHY*TCKGCP Trigger: TGGGCAACCCTTACATGTGCAATAATGAGTGTGATG...ATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR GCA 90 bp | TATGTAAACCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCGAAGTGGATTATTTTaGTATTCGTGGAGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YVNRYSLMPARSLPLQRNRSGLF*YSWSTQ Trigger: CTGGGTACTCCACGAATAGCAAAATAATCCACTTCG...ATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | TTTCGTCTTAAGAAACGGCCATACAATTTCCTGATAACATTTCTGCAGGAATTTGTCACCCACAGGGCATaGATCGACAGGAATCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FRLKKRPYNFLITFLQEFVTHRA*IDRNLD Trigger: GTCAAGATTCCTGTCGATCCATGCCCTGTGGGTGAC...AAATTCCTGCAGAAATGTTATCAGGAAATTGTATGGCCGTTTCTTAAGACGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | CTTATGATACTCCATGTAAACACTGTATTTGGAAGGATACATAGATCGGCATCCTTCTCTAGGATCATTTaGTCTGGACGCCCCGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMILHVNTVFGRIHRSASFSRII*SGRPDS Trigger: TGAATCGGGGCGTCCAGACCAAATGATCCTAGAGAA...GGATGCCGATCTATGTATCCTTCCAAATACAGTGTTTACATGGAGTATCATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATTCTTTGATCTCGAAGTaGATTATTTTGCTATTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIFFDASTLVALTEKSLHSLISK*IILLFV Trigger: CACGAATAGCAAAATAATCCACTTCGAGATCAAAGA...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | ATAGTCTCATATTTTGCAGACGTTGTCCAAGCTAGTGACCATCAATCCGTCTTCTTATTTTGCTATTCGTaGAGTACCCAGTGGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IVSYFADVVQASDHQSVFLFCYS*STQWST Trigger: AGTACTCCACTGGGTACTCCACGAATAGCAAAATAA...GAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | ATCAGTCAGTCTTTGCTGATTCGAATTAGATACATTAACAGATTGTCTGGTAACCGATACTGGAAATGCTaGGGATACAGGTGTTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISQSLLIRIRYINRLSGNRYWKC*GYRCLR Trigger: CCGCAAACACCTGTATCCCCAGCATTTCCAGTATCG...GTTACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | AACGAGGCTTCTGACCTAATACTGTCATTGGTTATTGTCCCACCAAGTCATGTAGACATTAGCTTGTTTTaGGTTAGAAACCTCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NEASDLILSLVIVPPSHVDISLF*VRNLKG Trigger: TCCCTTGAGGTTTCTAACCCAAAACAAGCTAATGTC...TACATGACTTGGTGGGACAATAACCAATGACAGTATTAGGTCAGAAGCCTCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTTATCCTATTAAACTTTaGAGGAGTACCGATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKLVTINPSSWLLKLSAYPIKL*RSTDTG Trigger: TCCAGTATCGGTACTCCTCCAAAGTTTAATAGGATA...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156177.9 |
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| CDS-3UTR GCA 90 bp | ATCAGTCAGTCTTTGCTGATTCGAATTAGATACATTAACAGATTGTCTGGTAACTTCCAAGTAGCAGACTaGCAAAATGTGGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ISQSLLIRIRYINRLSGNFQVAD*QNVEGC Trigger: ACATCCCTCCACATTTTGGCAGTCTGCTACTTGGAA...GTTACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CCA 90 bp | CTTATGATACTCCATGTAAACACTGTATTTGGAAGGATACATAGATCGGCATCCTTATTTTGCTATTCGTaGAGTACCCAGTGGAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LMILHVNTVFGRIHRSASLFCYS*STQWST Trigger: AGTACTCCACTGGGTACTCCACGAATAGCAAAATAA...GGATGCCGATCTATGTATCCTTCCAAATACAGTGTTTACATGGAGTATCATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 72 bp | ATCTTATTACACTTGCTATATGTAAACCGATATTCTTaGATGCCAGCACGCTCGTTGCCCTTACAGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILLHLLYVNRYS*MPARSLPLQRN Trigger: ATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGGTTTACATATAGCAAGTGTAATAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 72 bp | CTTTCCCTATTTCTTATATCAAAAGATGCTGTTGGTTaGAATAACAAACATCCAATCGACTTGGACGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLFLISKDAVG*NNKHPIDLDVG Trigger: CCCCACGTCCAAGTCGATTGGATGTTTGTTATTCAAACCAACAGCATCTTTTGATATAAGAAATAGGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 72 bp | CCAAAGAGGACCAAAAACTCAAACATCAGTCAGTCTTaGCTGATTCGAATTAGATACATTAACAGATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKRTKNSNISQS*LIRIRYINRLS Trigger: AGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGATGTTTGAGTTTTTGGTCCTCTTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| 3UTR CAA 72 bp | ATTGGTTATTGTCCCACCAAGTCATGTAGGACTTCATaGTCTTTAATCTTCTGGTTTGGCCTCATAATTATT | + |
|
Preference number: 4 (lower is better) Translates to: IGYCPTKSCRTS*SLIFWFGLIII Trigger: AATAATTATGAGGCCAAACCAGAAGATTAAAGACAATGAAGTCCTACATGACTTGGTGGGACAATAACCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR GCA 90 bp | TTTCGTCTTAAGAAACGGCCATACAATTTCCTGATAACATTTCTGCAGGAATTTTGTAATCCCAAACTTTaGCTTCTTCTGTGTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLKKRPYNFLITFLQEFCNPKL*LLLCKS Trigger: TGATTTACACAGAAGAAGGCAAAGTTTGGGATTACA...AAATTCCTGCAGAAATGTTATCAGGAAATTGTATGGCCGTTTCTTAAGACGAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | TGCTCAGATAATCCAGAGCAGGCACAGAGGTGTTTGCGGTGCCTTTaGGGATGGGGAGGTATGAGCCGGGGCTCCAAGGTCGGCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSDNPEQAQRCLRCL*GWGGMSRGSKVGPG Trigger: ACCAGGGCCGACCTTGGAGCCCCGGCTCATACCTCCCCATCCCCAAAGGCACCGCAAACACCTCTGTGCCTGCTCTGGATTATCTGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106575.10 |
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| CDS-3UTR CAA 90 bp | GCCGGTGTAGGCGTCTGGGCACGCGCAGCGCACATTGTTCTGGCAGGTCCCTCCTTAACCTGGAGAGGTTaGGGGTACTCCTTCCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGVGVWARAAHIVLAGPSLTWRG*GYSFQV Trigger: TACTTGGAAGGAGTACCCCAAACCTCTCCAGGTTAA...GGAGGGACCTGCCAGAACAATGTGCGCTGCGCGTGCCCAGACGCCTACACCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| CDS CCA 90 bp | TCTGGGCACGCGCAGCGCACATTGTTCTGGCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTGTCGCAGACATTAGCTCGCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGHAQRTLFWQVPPF*QCRSSLSQTLARLW Trigger: CCACAAGCGAGCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTGCGCGTGCCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106571.10 ENSMUST00000138953.9 |
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| CDS CCA 90 bp | TCTGGGCACGCGCAGCGCACATTGTTCTGGCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTGTCGCAGACATTAGCTTGTTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGHAQRTLFWQVPPF*QCRSSLSQTLACFG Trigger: CCCAAAACAAGCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTGCGCGTGCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106570.5 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | TCTGGGCACGCGCAGCGCACATTGTTCTGGCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTGTCGCAGACATTAGTACCGATACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGHAQRTLFWQVPPF*QCRSSLSQTLVPIL Trigger: CAGTATCGGTACTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTGCGCGTGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133268.9 |
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| CDS-3UTR CAA 90 bp | CTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCACAGCACAGGCCTGGTGTTTGCGGTGCCTTaGGGGATGGGGAGGTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCQWQSLGLCLLPHSTGLVFAVP*GMGRYE Trigger: CTCATACCTCCCCATCCCCAAAGGCACCGCAAACAC...CAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | AATGCTTTTATTTGGTTGGCCCACACACTGAGCAGAGCGGTACTAGGGTGCACCGAAGTGGCATGCAGGTaGCACTTGCACCTTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: NAFIWLAHTLSRAVLGCTEVACR*HLHLPR Trigger: GCGAGGAAGGTGCAAGTGCAACCTGCATGCCACTTC...GGTGCACCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | AATGCTTTTATTTGGTTGGCCCACACACTGAGCAGAGCGGTACTAGGGTGCACCTGGGGATACAGGTGTTaGCGGTGCCTTTGGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: NAFIWLAHTLSRAVLGCTWGYRC*RCLWGW Trigger: CCATCCCCAAAGGCACCGCAAACACCTGTATCCCCA...GGTGCACCCTAGTACCGCTCTGCTCAGTGTGTGGGCCAACCAAATAAAAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CTATGTCAGTGGCAATCGCTTGGGTTGTGTTTGCTTCCCCACAGCACAGGCCTGCAGTGCAGGAGCTCATaGTCGCAGACATTAGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: LCQWQSLGLCLLPHSTGLQCRSS*SQTLVP Trigger: CGGTACTAATGTCTGCGACAATGAGCTCCTGCACTG...CAGGCCTGTGCTGTGGGGAAGCAAACACAACCCAAGCGATTGCCACTGACATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133268.9 |
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| CDS GCA 90 bp | CAGGAGGGTGTGCCAGTTCAGGGGTACTCGCATCACACTCATTATTaGACATGTAAGGGTTGCCCATTGCACAGAAGGACTCTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QEGVPVQGYSHHTHY*TCKGCPLHRRTLEG Trigger: ACCCTCCAGAGTCCTTCTGTGCAATGGGCAACCCTTACATGTGCAATAATGAGTGTGATGCGAGTACCCCTGAACTGGCACACCCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | CCTTCACGGATTTCGGGTCCATGTGGAATGCATGGAGGCAGTCTGTaGCATAATACTGATAGGGCTGCCATGTTCGTCCGTAGTCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSRISGPCGMHGGSL*HNTDRAAMFVRSRE Trigger: CTCTCGACTACGGACGAACATGGCAGCCCTATCAGTATTATGCCACAGACTGCCTCCATGCATTCCACATGGACCCGAAATCCGTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CCGATATTCTTTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATGTGTTTGCGGTGCCTTaGGGGATGGGGAGGTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PIFFDASTLVALTEKSLHVFAVP*GMGRYE Trigger: CTCATACCTCCCCATCCCCAAAGGCACCGCAAACAC...ATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAAAGAATATCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS GCA 90 bp | GATCGATATAACTGCACCGATTGGAGTGGCCGAAGCATTCACAGTTaGTCAGATAATCCAGAGCAGGCACAGAGGTGTTTGCGGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DRYNCTDWSGRSIHS*SDNPEQAQRCLRCL Trigger: AAGGCACCGCAAACACCTCTGTGCCTGCTCTGGATTATCTGAGCAACTGTGAATGCTTCGGCCACTCCAATCGGTGCAGTTATATCGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106575.10 |
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| CDS-3UTR CAA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTTTCACTTTCAGATACTaGGTCATGTCCGTGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGYDWLALWRGLLHVCITFTFRY*VMSVDS Trigger: GGAATCCACGGACATGACCAAGTATCTGAAAGTGAA...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTGTGAGTTCAATGGTTTaGCTCCAAGACAGAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QGYDWLALWRGLLHVCITVSSMV*LQDRVM Trigger: CATCACTCTGTCTTGGAGCAAAACCATTGAACTCAC...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | AACAAACATCCAATCGACTTGGACGTGGGGTGGCAGGCAGAGCAGGAATTACCTTCGGGACCTGTAGTGTaGTGCTCACATTCACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: NKHPIDLDVGWQAEQELPSGPVV*CSHSHV Trigger: GACATGTGAATGTGAGCACAACACTACAGGTCCCGA...AGGTAATTCCTGCTCTGCCTGCCACCCCACGTCCAAGTCGATTGGATGTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | GGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTAACATCGGGACCTGTAGTGTaGTGCTCACATTCACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GMTGLRFGGGCYTCVSLTSGPVV*CSHSHV Trigger: GACATGTGAATGTGAGCACAACACTACAGGTCCCGA...TGTTAGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | TATCCGGAGGGTCCAGTTTCACTTTCAGATACTTGGTCATGTCCGTaGATTCCGGCTGGCAGGCTGTGTAATCCCAAACTTTGCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YPEGPVSLSDTWSCP*IPAGRLCNPKLCLL Trigger: AAGAAGGCAAAGTTTGGGATTACACAGCCTGCCAGCCGGAATCCACGGACATGACCAAGTATCTGAAAGTGAAACTGGACCCTCCGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CCTCTTCTTTTATACACTGTGTTGGAGTGGGTGTGCGTGTTTTCTATGTCAGTGTGGGGATACAGGTGTTaGCGGTGCCTTTGGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLYTVLEWVCVFSMSVWGYRC*RCLWGW Trigger: CCATCCCCAAAGGCACCGCAAACACCTGTATCCCCA...CACTGACATAGAAAACACGCACACCCACTCCAACACAGTGTATAAAAGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
||
| CDS TCA 90 bp | CCAGTGGAGTACTCTTCCGTGCAAATGATTTCCAAGACCGTGTGCTaGGATAAATCCTTCACGGATTTCGGGTCCATGTGGAATGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PVEYSSVQMISKTVC*DKSFTDFGSMWNAW Trigger: CCATGCATTCCACATGGACCCGAAATCCGTGAAGGATTTATCTCAGCACACGGTCTTGGAAATCATTTGCACGGAAGAGTACTCCACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
||
| CDS-3UTR CAA 90 bp | GGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTAACATTCACTTTCAGATACTaGGTCATGTCCGTGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: GMTGLRFGGGCYTCVSLTFTFRY*VMSVDS Trigger: GGAATCCACGGACATGACCAAGTATCTGAAAGTGAA...TGTTAGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | TTGATGCCAGCACGCTCGTTGCCCTTACAGAGAAATCTCTGCATGACGAAACGATTAACCTGGAGAGGTTaGGGGTACTCCTTCCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LMPARSLPLQRNLCMTKRLTWRG*GYSFQV Trigger: TACTTGGAAGGAGTACCCCAAACCTCTCCAGGTTAA...TCGTTTCGTCATGCAGAGATTTCTCTGTAAGGGCAACGAGCGTGCTGGCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | GTTACAGAGCAACGTTCACTAAAGCACAGGTTGGAAGGGATTTGGGGGTCGGGGTCGAAGTGGATTATTTaGCTATTCGTGGAGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTEQRSLKHRLEGIWGSGSKWII*LFVEYP Trigger: TGGGTACTCCACGAATAGCAAAATAATCCACTTCGA...CCCCGACCCCCAAATCCCTTCCAACCTGTGCTTTAGTGAACGTTGCTCTGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CAGGGGTATGACTGGCTTGCGCTTTGGAGGGGGCTGTTACACGTGTGTATCACTCATTCACATGTCAGTTaGCTGTTGTCATACAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: QGYDWLALWRGLLHVCITHSHVS*LLSYKH Trigger: GTGTTTGTATGACAACAGCAAACTGACATGTGAATG...AGTGATACACACGTGTAACAGCCCCCTCCAAAGCGCAAGCCAGTCATACCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CTGACACATTTGTCACCTGCAGGGTGGCAGTGTGCCGGGATTGAACATACATTGGTCGCAGACATTAGCTaGTTTTGGGTTAGAAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTHLSPAGWQCAGIEHTLVADIS*FWVRNL Trigger: GAGGTTTCTAACCCAAAACAAGCTAATGTCTGCGAC...CAATGTATGTTCAATCCCGGCACACTGCCACCCTGCAGGTGACAAATGTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156177.9 |
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| CDS GCA 90 bp | GGAGGGATGTCTTCCTTCAAAATCAAACATCAGCTCAGGAGGGTGTaGCAGTTCAGGGGTACTCGCATCACACTCATTATTGCACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGMSSFKIKHQLRRV*QFRGTRITLIIAHV Trigger: TACATGTGCAATAATGAGTGTGATGCGAGTACCCCTGAACTGGCACACCCTCCTGAGCTGATGTTTGATTTTGAAGGAAGACATCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | AGCCGAGGTCCAGCGAAAAACGCAAACCTGTCTTTGATCTCGAAGTaGATTATTTTGCTATTCGTGGAGTACCCAGTGGAGTACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRGPAKNANLSLISK*IILLFVEYPVEYSS Trigger: GGAAGAGTACTCCACTGGGTACTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTTTTTCGCTGGACCTCGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | GCTCACATTCACATGTCAGTTTGCTGTTGTCATACAAACACGAAGTaGCATGCAGGTTGCACTTGCACCTTCCTCGCACCTTTATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AHIHMSVCCCHTNTK*HAGCTCTFLAPLCL Trigger: CAGACATAAAGGTGCGAGGAAGGTGCAAGTGCAACCTGCATGCCACTTCGTGTTTGTATGACAACAGCAAACTGACATGTGAATGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS TCA 90 bp | CCATATTTCGTAGCCGAGGTCCAGCGAAAAACGCAAACCTGTCTTTaGTCTCGAAGTGGATTATTTTGCTATTCGTGGAGTACCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PYFVAEVQRKTQTCL*SRSGLFCYSWSTQW Trigger: CCACTGGGTACTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTTTTTCGCTGGACCTCGGCTACGAAATATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | ATTGTCGCAGACATTAGGTTGACAGCCGTAGTACCAGGAATTTCCTaGCAGACACTCATCACATTTAGGCCCTGTTGTTCCAGTCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: IVADIRLTAVVPGIS*QTLITFRPCCSSLT Trigger: TGTAAGACTGGAACAACAGGGCCTAAATGTGATGAGTGTCTGCCAGGAAATTCCTGGTACTACGGCTGTCAACCTAATGTCTGCGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072596.12 ENSMUST00000106575.10 ENSMUST00000138344.9 |
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| CDS TCA 90 bp | TTTTGCTATTCGTGGAGTACCCAGTGGAGTACTCTTCCGTGCAAATaGTTTCCAAGACCGTGTGCTGAGATAAATCCTTCACGGATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FCYSWSTQWSTLPCK*FPRPCAEINPSRIS Trigger: CGAAATCCGTGAAGGATTTATCTCAGCACACGGTCTTGGAAATCATTTGCACGGAAGAGTACTCCACTGGGTACTCCACGAATAGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS GCA 90 bp | TCATGTCCGTGGATTCCGGCTGGCAGGCTGTGTAATCCCAAACTTTaGCTTCTTCTGTGTAAATCAGGCTCTTACATACATCATAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCPWIPAGRLCNPKL*LLLCKSGSYIHHNV Trigger: GACATTATGATGTATGTAAGAGCCTGATTTACACAGAAGAAGGCAAAGTTTGGGATTACACAGCCTGCCAGCCGGAATCCACGGACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | GCCAATATGGCAGCTTGTAACAGATTTCCTTATACCCACAATGCACCTGACAGCGTGAGTTCAATGGTTTaGCTCCAAGACAGAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ANMAACNRFPYTHNAPDSVSSMV*LQDRVM Trigger: CATCACTCTGTCTTGGAGCAAAACCATTGAACTCAC...GCTGTCAGGTGCATTGTGGGTATAAGGAAATCTGTTACAAGCTGCCATATTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CTGCTGTCCTGGTTCCCCAGGTGGCCTCTTATGATACTCCATGTAAACACTGTAAACGCAAACCTGTCTTaGATCTCGAAGTGGATTATT | + |
|
Preference number: 5 (lower is better) Translates to: LLSWFPRWPLMILHVNTVNANLS*ISKWII Trigger: AATAATCCACTTCGAGATCAAAGACAGGTTTGCGTT...TACAGTGTTTACATGGAGTATCATAAGAGGCCACCTGGGGAACCAGGACAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | ATCTTTCAACCAACAAGGGTTACAGAGCAACGTTCACTAAAGCACAGGTTGGAACAGTGCAGGAGCTCATaGTCGCAGACATTAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IFQPTRVTEQRSLKHRLEQCRSS*SQTLAC Trigger: ACAAGCTAATGTCTGCGACAATGAGCTCCTGCACTG...TTCCAACCTGTGCTTTAGTGAACGTTGCTCTGTAACCCTTGTTGGTTGAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156177.9 |
||
| CDS-3UTR CAA 90 bp | GTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTTCACTTTCAGATACTaGGTCATGTCCGTGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVQASDHQSVFLVIKVVSFTFRY*VMSVDS Trigger: GGAATCCACGGACATGACCAAGTATCTGAAAGTGAA...GCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | ATTGTCGCAGACATTAGCTATGCACACATTCTCATCGTCCAGCTGTGCAGAAGCAACGCAAACCTGTCTTaGATCTCGAAGTGGATTATT | + |
|
Preference number: 5 (lower is better) Translates to: IVADISYAHILIVQLCRSNANLS*ISKWII Trigger: AATAATCCACTTCGAGATCAAAGACAGGTTTGCGTT...GCTTCTGCACAGCTGGACGATGAGAATGTGTGCATAGCTAATGTCTGCGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128219.9 |
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| CDS-3UTR CAA 90 bp | TTTCGTCTTAAGAAACGGCCATACAATTTCCTGATAACATTTCTGCAGGAATTTGAAGTGGCATGCAGGTaGCACTTGCACCTTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLKKRPYNFLITFLQEFEVACR*HLHLPR Trigger: GCGAGGAAGGTGCAAGTGCAACCTGCATGCCACTTC...AAATTCCTGCAGAAATGTTATCAGGAAATTGTATGGCCGTTTCTTAAGACGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | GTTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTCGAAGTGGATTATTTaGCTATTCGTGGAGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVQASDHQSVFLVIKVVSSKWII*LFVEYP Trigger: TGGGTACTCCACGAATAGCAAAATAATCCACTTCGA...GCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | TTGTCCAAGCTAGTGACCATCAATCCGTCTTCCTGGTTATTAAAGTTGTCAGCTTCGAAGTGGATTATTTaGCTATTCGTGGAGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSKLVTINPSSWLLKLSASKWII*LFVEYP Trigger: TGGGTACTCCACGAATAGCAAAATAATCCACTTCGA...AGCTGACAACTTTAATAACCAGGAAGACGGATTGATGGTCACTAGCTTGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS CCA 90 bp | AGAAACCTCAAGGGAAGAAATATTCGGCCATATCCTATTAAACTTTaGAGGAGTTCCCTCAGAGTGAAAGGCTGGAAAACAATAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RNLKGRNIRPYPIKL*RSSLRVKGWKTIGV Trigger: AACACCTATTGTTTTCCAGCCTTTCACTCTGAGGGAACTCCTCCAAAGTTTAATAGGATATGGCCGAATATTTCTTCCCTTGAGGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106570.5 |
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| CDS-3UTR CAA 90 bp | ATCTTTCAACCAACAAGGGTTACAGAGCAACGTTCACTAAAGCACAGGTTGGAACATTCACATGTCAGTTaGCTGTTGTCATACAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: IFQPTRVTEQRSLKHRLEHSHVS*LLSYKH Trigger: GTGTTTGTATGACAACAGCAAACTGACATGTGAATG...TTCCAACCTGTGCTTTAGTGAACGTTGCTCTGTAACCCTTGTTGGTTGAAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | ATCAGTCAGTCTTTGCTGATTCGAATTAGATACATTAACAGATTGTCTGGTAACGTGAGTTCAATGGTTTaGCTCCAAGACAGAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISQSLLIRIRYINRLSGNVSSMV*LQDRVM Trigger: CATCACTCTGTCTTGGAGCAAAACCATTGAACTCAC...GTTACCAGACAATCTGTTAATGTATCTAATTCGAATCAGCAAAGACTGACTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS-3UTR CAA 90 bp | CTTATGATACTCCATGTAAACACTGTATTTGGAAGGATACATAGATCGGCATCCAACGCAAACCTGTCTTaGATCTCGAAGTGGATTATT | + |
|
Preference number: 5 (lower is better) Translates to: LMILHVNTVFGRIHRSASNANLS*ISKWII Trigger: AATAATCCACTTCGAGATCAAAGACAGGTTTGCGTT...GGATGCCGATCTATGTATCCTTCCAAATACAGTGTTTACATGGAGTATCATAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128219.9 ENSMUST00000133268.9 ENSMUST00000156177.9 |
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| CDS CCA 72 bp | ACTCCGTCCCGCTCGCTGCTTCTACTGCTGCTGCTCTaGCCACCACCGCTGCCACTGAGCAGGGACCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPSRSLLLLLLL*PPPLPLSRDLQ Trigger: CTGGAGGTCCCTGCTCAGTGGCAGCGGTGGTGGCCAGAGCAGCAGCAGTAGAAGCAGCGAGCGGGACGGAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051253.4 |
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| CDS CCA 72 bp | GCGCAGCGCACATTGTTCTGGCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTGTCGCAGACATTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AQRTLFWQVPPF*QCRSSLSQTLG Trigger: ACCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072596.12 ENSMUST00000106575.10 ENSMUST00000138344.9 |
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| CDS CCA 72 bp | GCACATGTAAGGGTTGCCCATTGCACAGAAGGACTCTaGAGGGTCTCCACAGGTAATATCCGGAGGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AHVRVAHCTEGL*RVSTGNIRRVQ Trigger: CTGGACCCTCCGGATATTACCTGTGGAGACCCTCCAGAGTCCTTCTGTGCAATGGGCAACCCTTACATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 72 bp | GCGCAGCGCACATTGTTCTGGCAGGTCCCTCCATTCTaGCAGTGCAGGAGCTCATTGTCGCAGACATTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AQRTLFWQVPPF*QCRSSLSQTLV Trigger: TACTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCAGAACAATGTGCGCTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133268.9 |
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| CDS CCA 72 bp | GGCCGAAGCATTCACAGTTACCGATACTGGAAATGCTaGGGATACAGGTGTTTGCGGTGCCTTTGGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: GRSIHSYRYWKC*GYRCLRCLWGW Trigger: CCATCCCCAAAGGCACCGCAAACACCTGTATCCCCAGCATTTCCAGTATCGGTAACTGTGAATGCTTCGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072596.12 ENSMUST00000131027.9 |
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| CDS CAA 72 bp | TGGCAGGTCCCTCCATTCTGGCAGTGCAGGAGCTCATaGTCGCAGACATTAGCTCGCTTGTGGTTTGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: WQVPPFWQCRSS*SQTLARLWFAT Trigger: AGTTGCAAACCACAAGCGAGCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106571.10 ENSMUST00000138953.9 |
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| CDS GCA 72 bp | AGTGGCCGAAGCATTCACAGTTACCGATACTGGAAATaGTGGGGATACAGGTGTTTGCGGTGCCTTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGRSIHSYRYWK*WGYRCLRCLWG Trigger: TCCCCAAAGGCACCGCAAACACCTGTATCCCCAGCATTTCCAGTATCGGTAACTGTGAATGCTTCGGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072596.12 ENSMUST00000131027.9 |
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| CDS CAA 72 bp | TGGCAGGTCCCTCCATTCTGGCAGTGCAGGAGCTCATaGTCGCAGACATTAGTACCGATACTGGAAATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WQVPPFWQCRSS*SQTLVPILEML Trigger: CAGCATTTCCAGTATCGGTACTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133268.9 |
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| CDS GCA 72 bp | AACTGCACCGATTGGAGTGGCCGAAGCATTCACAGTTaGTCAGATAATCCAGAGCAGGCACAGAGGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: NCTDWSGRSIHS*SDNPEQAQRCL Trigger: CAAACACCTCTGTGCCTGCTCTGGATTATCTGAGCAACTGTGAATGCTTCGGCCACTCCAATCGGTGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106575.10 |
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| CDS CCA 72 bp | ATTTCGGGTCCATGTGGAATGCATGGAGGCAGTCTGTaGCATAATACTGATAGGGCTGCCATGTTCGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ISGPCGMHGGSL*HNTDRAAMFVR Trigger: ACGGACGAACATGGCAGCCCTATCAGTATTATGCCACAGACTGCCTCCATGCATTCCACATGGACCCGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 72 bp | GATTGGAGTGGCCGAAGCATTCACAGTTACCGATACTaGAAATGCTGGGGATACAGGTGTTTGCGGTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DWSGRSIHSYRY*KCWGYRCLRCL Trigger: AAGGCACCGCAAACACCTGTATCCCCAGCATTTCCAGTATCGGTAACTGTGAATGCTTCGGCCACTCCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072596.12 ENSMUST00000131027.9 |
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| CDS CAA 72 bp | TGGCAGGTCCCTCCATTCTGGCAGTGCAGGAGCTCATaGTCGCAGACATTAGCTTGTTTTGGGTTAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: WQVPPFWQCRSS*SQTLACFGLET Trigger: GGTTTCTAACCCAAAACAAGCTAATGTCTGCGACAATGAGCTCCTGCACTGCCAGAATGGAGGGACCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106570.5 ENSMUST00000156177.9 |
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| CDS GCA 72 bp | GTGCCAGTTCAGGGGTACTCGCATCACACTCATTATTaGACATGTAAGGGTTGCCCATTGCACAGAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: VPVQGYSHHTHY*TCKGCPLHRRT Trigger: AGTCCTTCTGTGCAATGGGCAACCCTTACATGTGCAATAATGAGTGTGATGCGAGTACCCCTGAACTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 72 bp | CACATGTCAGTTTGCTGTTGTCATACAAACACGAAGTaGCATGCAGGTTGCACTTGCACCTTCCTCGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HMSVCCCHTNTK*HAGCTCTFLAP Trigger: AGGTGCGAGGAAGGTGCAAGTGCAACCTGCATGCCACTTCGTGTTTGTATGACAACAGCAAACTGACATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CAA 90 bp | CCACAGTCGGGACCTGTAGTGTTGTGCTCACATTCACATGTCAGTTaGCTGTTGTCATACAAACACGAAGTGGCATGCAGGTTGCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PQSGPVVLCSHSHVS*LLSYKHEVACRLHL Trigger: CAAGTGCAACCTGCATGCCACTTCGTGTTTGTATGACAACAGCAAACTGACATGTGAATGTGAGCACAACACTACAGGTCCCGACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS GCA 72 bp | TGTCATACAAACACGAAGTGGCATGCAGGTTGCACTTaGACCTTCCTCGCACCTTTATGTCTGAGATCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: CHTNTKWHAGCT*TFLAPLCLRSH Trigger: ATGCGATCTCAGACATAAAGGTGCGAGGAAGGTGCAAGTGCAACCTGCATGCCACTTCGTGTTTGTATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS GCA 72 bp | GTCAGTTTGCTGTTGTCATACAAACACGAAGTGGCATaGAGGTTGCACTTGCACCTTCCTCGCACCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: VSLLLSYKHEVA*RLHLHLPRTFM Trigger: CATAAAGGTGCGAGGAAGGTGCAAGTGCAACCTGCATGCCACTTCGTGTTTGTATGACAACAGCAAACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS GCA 72 bp | CCAAAGGGTTACAATAACACTTACCGATACTGGAAATaGTGGGGATACAGGTGTTTGCGGTGCCTTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: PKGYNNTYRYWK*WGYRCLRCLWG Trigger: TCCCCAAAGGCACCGCAAACACCTGTATCCCCAGCATTTCCAGTATCGGTAAGTGTTATTGTAACCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138344.9 |
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| CDS CCA 72 bp | AAGGGTTACAATAACACTTACCGATACTGGAAATGCTaGGGATACAGGTGTTTGCGGTGCCTTTGGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: KGYNNTYRYWKC*GYRCLRCLWGW Trigger: CCATCCCCAAAGGCACCGCAAACACCTGTATCCCCAGCATTTCCAGTATCGGTAAGTGTTATTGTAACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138344.9 |
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| CDS CAA 72 bp | TTGTCATACAAACACGAAGTGGCATGCAGGTTGCACTaGCACCTTCCTCGCACCTTTATGTCTGAGATCGCA | + |
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Preference number: 6 (lower is better) Translates to: LSYKHEVACRLH*HLPRTFMSEIA Trigger: TGCGATCTCAGACATAAAGGTGCGAGGAAGGTGCAAGTGCAACCTGCATGCCACTTCGTGTTTGTATGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CAA 90 bp | GCCATATTTCGTAGCCGAGGTCCAGCGAAAAACGCAAACCTGTCTTaGATCTCGAAGTGGATTATTTTGCTATTCGTGGAGTACCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: AIFRSRGPAKNANLS*ISKWIILLFVEYPV Trigger: CACTGGGTACTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTTTTTCGCTGGACCTCGGCTACGAAATATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS TCA 72 bp | TACTCTTCCGTGCAAATGATTTCCAAGACCGTGTGCTaGGATAAATCCTTCACGGATTTCGGGTCCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: YSSVQMISKTVC*DKSFTDFGSMW Trigger: CCACATGGACCCGAAATCCGTGAAGGATTTATCTCAGCACACGGTCTTGGAAATCATTTGCACGGAAGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 72 bp | TTGAGCCCAAAGGGTTACAATAACACTTACCGATACTaGAAATGCTGGGGATACAGGTGTTTGCGGTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSPKGYNNTYRY*KCWGYRCLRCL Trigger: AAGGCACCGCAAACACCTGTATCCCCAGCATTTCCAGTATCGGTAAGTGTTATTGTAACCCTTTGGGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138344.9 |
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| CDS CAA 72 bp | CGTAGCCGAGGTCCAGCGAAAAACGCAAACCTGTCTTaGATCTCGAAGTGGATTATTTTGCTATTCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RSRGPAKNANLS*ISKWIILLFVE Trigger: CTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTTTTTCGCTGGACCTCGGCTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CAA 72 bp | GGACCTGTAGTGTTGTGCTCACATTCACATGTCAGTTaGCTGTTGTCATACAAACACGAAGTGGCATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GPVVLCSHSHVS*LLSYKHEVACR Trigger: CCTGCATGCCACTTCGTGTTTGTATGACAACAGCAAACTGACATGTGAATGTGAGCACAACACTACAGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CAA 90 bp | CCAGCGAAAAACGCAAACCTGTCTTTGATCTCGAAGTGGATTATTTaGCTATTCGTGGAGTACCCAGTGGAGTACTCTTCCGTGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: PAKNANLSLISKWII*LFVEYPVEYSSVQM Trigger: CATTTGCACGGAAGAGTACTCCACTGGGTACTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTTTTTCGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS TCA 72 bp | GTAGCCGAGGTCCAGCGAAAAACGCAAACCTGTCTTTaGTCTCGAAGTGGATTATTTTGCTATTCGTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VAEVQRKTQTCL*SRSGLFCYSWS Trigger: ACTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTTTTTCGCTGGACCTCGGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS GCA 72 bp | TGGATTCCGGCTGGCAGGCTGTGTAATCCCAAACTTTaGCTTCTTCTGTGTAAATCAGGCTCTTACATACAT | + |
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Preference number: 6 (lower is better) Translates to: WIPAGRLCNPKL*LLLCKSGSYIH Trigger: ATGTATGTAAGAGCCTGATTTACACAGAAGAAGGCAAAGTTTGGGATTACACAGCCTGCCAGCCGGAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS GCA 72 bp | TCTTCCTTCAAAATCAAACATCAGCTCAGGAGGGTGTaGCAGTTCAGGGGTACTCGCATCACACTCATTATT | + |
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Preference number: 6 (lower is better) Translates to: SSFKIKHQLRRV*QFRGTRITLII Trigger: AATAATGAGTGTGATGCGAGTACCCCTGAACTGGCACACCCTCCTGAGCTGATGTTTGATTTTGAAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 72 bp | CCAGCGAAAAACGCAAACCTGTCTTTGATCTCGAAGTaGATTATTTTGCTATTCGTGGAGTACCCAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PAKNANLSLISK*IILLFVEYPVE Trigger: CTCCACTGGGTACTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTTTTTCGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CCA 72 bp | ATTAAACTTTGGAGGAGTTCCCTCAGAGTGAAAGGCTaGAAAACAATAGGTGTTTGCGGTGCCTTTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: IKLWRSSLRVKG*KTIGVCGAFGD Trigger: ATCCCCAAAGGCACCGCAAACACCTATTGTTTTCCAGCCTTTCACTCTGAGGGAACTCCTCCAAAGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106570.5 |
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| CDS CAA 72 bp | TGGTCTGGACGCCCCGATTCAAAGGTAATAACTATGTaGTCTGTGAGTTCAATGGTTTTGCTCCAAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: WSGRPDSKVITM*SVSSMVLLQDR Trigger: TCTGTCTTGGAGCAAAACCATTGAACTCACAGACAACATAGTTATTACCTTTGAATCGGGGCGTCCAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CAA 72 bp | AACGCAAACCTGTCTTTGATCTCGAAGTGGATTATTTaGCTATTCGTGGAGTACCCAGTGGAGTACTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: NANLSLISKWII*LFVEYPVEYSS Trigger: GGAAGAGTACTCCACTGGGTACTCCACGAATAGCAAAATAATCCACTTCGAGATCAAAGACAGGTTTGCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CAA 90 bp | AGGATCATTTGGTCTGGACGCCCCGATTCAAAGGTAATAACTATGTaGTCTGTGAGTTCAATGGTTTTGCTCCAAGACAGAGTGATGTTA | + |
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Preference number: 6 (lower is better) Translates to: RIIWSGRPDSKVITM*SVSSMVLLQDRVML Trigger: TAACATCACTCTGTCTTGGAGCAAAACCATTGAACTCACAGACAACATAGTTATTACCTTTGAATCGGGGCGTCCAGACCAAATGATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000072596.12 ENSMUST00000106570.5 ENSMUST00000106571.10 ENSMUST00000106575.10 ENSMUST00000128219.9 ENSMUST00000131027.9 ENSMUST00000133268.9 ENSMUST00000138344.9 ENSMUST00000138953.9 ENSMUST00000156177.9 |
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| CDS CAA 90 bp | CAGTCTTACACTCACAAAATCCTGAGCCATTACAACGATCATGGATaGAGCCCAAAGGGTTACAATAACACTTACCGATACTGGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: QSYTHKILSHYNDHG*SPKGYNNTYRYWKC Trigger: GCATTTCCAGTATCGGTAAGTGTTATTGTAACCCTTTGGGCTCAATCCATGATCGTTGTAATGGCTCAGGATTTTGTGAGTGTAAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138344.9 |
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| CDS TCA 72 bp | TTGTCGCAGACATTAGCTCGCTTGTGGTTTGCAACTTaGACAGAAGAAACTGTTGACAAAGCTAATTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSQTLARLWFAT*TEETVDKANLG Trigger: TCCCAAATTAGCTTTGTCAACAGTTTCTTCTGTTCAAGTTGCAAACCACAAGCGAGCTAATGTCTGCGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106571.10 ENSMUST00000138953.9 |
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| CDS CAA 72 bp | ACTCACAAAATCCTGAGCCATTACAACGATCATGGATaGAGCCCAAAGGGTTACAATAACACTCTATGCACA | + |
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Preference number: 6 (lower is better) Translates to: THKILSHYNDHG*SPKGYNNTLCT Trigger: TGTGCATAGAGTGTTATTGTAACCCTTTGGGCTCAATCCATGATCGTTGTAATGGCTCAGGATTTTGTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072596.12 ENSMUST00000106575.10 |
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| CDS CAA 72 bp | ACTCACAAAATCCTGAGCCATTACAACGATCATGGATaGAGCCCAAAGGGTTACAATAACACTTACCGATAC | + |
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Preference number: 6 (lower is better) Translates to: THKILSHYNDHG*SPKGYNNTYRY Trigger: GTATCGGTAAGTGTTATTGTAACCCTTTGGGCTCAATCCATGATCGTTGTAATGGCTCAGGATTTTGTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138344.9 |
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| CDS CAA 90 bp | CAGTCTTACACTCACAAAATCCTGAGCCATTACAACGATCATGGATaGAGCCCAAAGGGTTACAATAACACTCTATGCACACATTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QSYTHKILSHYNDHG*SPKGYNNTLCTHSH Trigger: ATGAGAATGTGTGCATAGAGTGTTATTGTAACCCTTTGGGCTCAATCCATGATCGTTGTAATGGCTCAGGATTTTGTGAGTGTAAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072596.12 ENSMUST00000106575.10 |
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