Pregenerated sensors for NTN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070564Ensembl transcript IDs: ENSMUST00000107742.11, ENSMUST00000182750.10, ENSMUST00000183120.4
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTaGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCAGGATGAGGCG | + |
|
Preference number: 1 (lower is better) Translates to: SALLLLQSPQRPGPS*SPGQREAVAVQDEA Trigger: CGCCTCATCCTGAACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR TCA 90 bp | CCCATCGTGGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCAGGATaGGGCGCGCAGGGTCATAGTTGTCGTCGTCGTGGGTCTGCGCAG | + |
|
Preference number: 1 (lower is better) Translates to: PIVVSRAARGRGGSG*GAQGHSCRRRGSAQ Trigger: CTGCGCAGACCCACGACGACGACAACTATGACCCTGCGCGCCTCATCCTGAACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR CCA 90 bp | GGCTCTGGGGACTCACACCTTACATTAGTAGCTCACTTTAGTTCCTaGGCCCAGGGCTCCGTGTGGGTGGCAGCAGGCCTCGGCAGGCAC | + |
|
Preference number: 1 (lower is better) Translates to: GSGDSHLTLVAHFSS*AQGSVWVAAGLGRH Trigger: GTGCCTGCCGAGGCCTGCTGCCACCCACACGGAGCCCTGGGCCCAGGAACTAAAGTGAGCTACTAATGTAAGGTGTGAGTCCCCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR-3UTR GCA 90 bp | CCGTGTGGGTGGCAGCAGGCCTCGGCAGGCACCTCCGCGCTCCTTCTGCTGCAGTCGTCGTCGTGGGTCTaGGCAGCACGGCCCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PCGWQQASAGTSALLLLQSSSWV*AARPSR Trigger: CCTGCTGGGCCGTGCTGCGCAGACCCACGACGACGA...CTGCAGCAGAAGGAGCGCGGAGGTGCCTGCCGAGGCCTGCTGCCACCCACACGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGGCTTCTGATTGGCTCTaGGGACTCACACCTTACATT | + |
|
Preference number: 2 (lower is better) Translates to: TSGPNVGNVTCGVASRALASDWL*GLTPYI Trigger: AATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGC...CAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| 3UTR GCA 72 bp | GGCAGCAGGCCTCGGCAGGCACCTCCGCGCTCCTTCTaGTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSRPRQAPPRSF*CSRRSGRAHRG Trigger: ACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGAGGTGCCTGCCGAGGCCTGCTGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR GCA 72 bp | AGCAGGCCTCGGCAGGCACCTCCGCGCTCCTTCTGCTaGAGTCGCCGCAGCGGCCGGGCCCATCGTGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRPRQAPPRSFC*SRRSGRAHRGL Trigger: GAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGAGGTGCCTGCCGAGGCCTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR CCA 72 bp | CTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTaGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLLQSPQRPGPS*SPGQREAVAVQ Trigger: CTGAACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR CCA 72 bp | CTCACTTTAGTTCCTGGGCCCAGGGCTCCGTGTGGGTaGCAGCAGGCCTCGGCAGGCACCTCCGCGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LTLVPGPRAPCG*QQASAGTSALL Trigger: AAGGAGCGCGGAGGTGCCTGCCGAGGCCTGCTGCCACCCACACGGAGCCCTGGGCCCAGGAACTAAAGTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR GCA 72 bp | GCAGTCACTTCCGGTCCCAACGTAGGCAACGTCACATaGGGAGTGGCGTCACGGGCACTGAAGCTTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: AVTSGPNVGNVT*GVASRALKLLI Trigger: AATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGTGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| 3UTR CCA 72 bp | GACTCACACCTTACATTAGTAGCTCACTTTAGTTCCTaGGCCCAGGGCTCCGTGTGGGTGGCAGCAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DSHLTLVAHFSS*AQGSVWVAAGL Trigger: GAGGCCTGCTGCCACCCACACGGAGCCCTGGGCCCAGGAACTAAAGTGAGCTACTAATGTAAGGTGTGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| 3UTR CCA 72 bp | ATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTaGCTCTGGGGACTCACACCTTACATTAGTAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MRSGVTGTEASD*LWGLTPYISSS Trigger: TGAGCTACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCACCTCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCCGGGCAGCGTGGCCGTaGCACTGGCAGCGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRHLRAPSAAVAAAAGPIRAAWP*HWQRPL Trigger: AAGAGGCCGCTGCCAGTGCCACGGCCACGCTGCCCG...GATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGAGGTGCCTGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCAGCGCCAGGGCGCAGGCGGGGCCAGTGGTGTGGTaGCGGCAGCGGCAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLRSTAQQEVVSARAQAGPVVW*RQRQRG Trigger: CCCACGCTGCCGCTGCCGCCACCACACCACTGGCCC...CGCCTGCGCCCTGGCGCTGACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | CGTCGTCGTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCAGCGCCAGGGCGCACAGCGGGCAGCGTaGCCGTGGCACTGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRGSAQHGPAGGSQRQGAQRAA*PWHWQR Trigger: CCGCTGCCAGTGCCACGGCCACGCTGCCCGCTGTGC...GCCCTGGCGCTGACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCACGACGACG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | AGGCACCTCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGCCTGGGCCAGTGGTGTaGTGGCGGCAGCGGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLRAPSAAVAAAAGPIVPGPVV*WRQRQR Trigger: ACGCTGCCGCTGCCGCCACCACACCACTGGCCCAGG...CACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGAGGTGCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | AGGCACCTCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGCGTGGCCGTGGCACTaGCAGCGGCCTCTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLRAPSAAVAAAAGPIVAWPWH*QRPLTP Trigger: TGGAGTAAGAGGCCGCTGCCAGTGCCACGGCCACGC...CACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGAGGTGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR GCA 90 bp | GTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCAGCGCCAGGGCGCAGGCGAGGGCCAGGGCTGGCTaGAGGAAGAGCACAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLRSTAQQEVVSARAQARARAG*RKSTGL Trigger: CAGACCTGTGCTCTTCCTGCAGCCAGCCCTGGCCCT...CGCCTGCGCCCTGGCGCTGACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | TCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGTCTCCAAGGCAGGGCCAGGGCTaGCTGCAGGAAGAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SALLLLQSPQRPGPSWSPRQGQG*LQEEHR Trigger: CCTGTGCTCTTCCTGCAGCCAGCCCTGGCCCTGCCT...TGGAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR TCA 90 bp | GCAGCGGCCGGGCCCATCGTGGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCATGCATGTCAGGCCTGTaGCCCCTAACTTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAGPIVVSRAARGRGGSCMSGL*PLTCRS Trigger: GCTCCTGCAAGTTAGGGGTCACAGGCCTGACATGCA...TGAACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR TCA 90 bp | CGGCCGGGCCCATCGTGGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCAGGATGCCACGCACGCTGTTTaGACACAGCCAGCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGPSWSPGQREAVAVQDATHAV*TQPARA Trigger: TGCACGTGCTGGCTGTGTTCAAACAGCGTGCGTGGC...ATCCTGAACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR GCA 90 bp | CCGTGTGGGTGGCAGCAGGCCTCGGCAGGCACCTCCGCGCTCCTTCTGCTGCAGACCGCCTCAGACGGCTaGGACGACGACGCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PCGWQQASAGTSALLLLQTASDG*DDDAET Trigger: GGTTTCAGCGTCGTCGTCGCAGCCGTCTGAGGCGGT...CTGCAGCAGAAGGAGCGCGGAGGTGCCTGCCGAGGCCTGCTGCCACCCACACGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | GCCCATCGTGGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCAGGATGAGGCGCACAGCTCTCACACCCTaGGCCAGTGGTGTGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHRGLQGSARPWRFRMRRTALTP*ASGVVA Trigger: CGCCACCACACCACTGGCCCAGGGTGTGAGAGCTGT...GCGCCTCATCCTGAACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | GGCACCTCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGGGCCTCTTACTCCAGTaGTCACCAGCCCTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTSALLLLQSPQRPGPSWGLLLQ*SPALLF Trigger: GAAAAGCAGGGCTGGTGACCACTGGAGTAAGAGGCC...CCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGAGGTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGGGGCCAGTGGTGTGGTaGCGGCAGCGGCAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGPNVGNVTCGVASRALGPVVW*RQRQRG Trigger: CCCACGCTGCCGCTGCCGCCACCACACCACTGGCCC...CAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGTCTCTCCCGTTGCTCCAATTaGGTGGCACTGGCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPRSFCCSRRSGRAHRGLSRCSN*VALAGQ Trigger: TTGCCCTGCCAGTGCCACCCAATTGGAGCAACGGGA...GAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | CACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTCGGGCAGCGTGGCCGTaGCACTGGCAGCGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFRSQRRQRHMRSGVTGTRAAWP*HWQRPL Trigger: AAGAGGCCGCTGCCAGTGCCACGGCCACGCTGCCCG...AGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGGCACAGCGGGCAGCGTaGCCGTGGCACTGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PNVGNVTCGVASRALKLLAQRAA*PWHWQR Trigger: CCGCTGCCAGTGCCACGGCCACGCTGCCCGCTGTGC...CAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTGCACAGCGGGCAGCGTaGCCGTGGCACTGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSGVTGTEASDWLWGLTPAQRAA*PWHWQR Trigger: CCGCTGCCAGTGCCACGGCCACGCTGCCCGCTGTGC...AGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGGGGCCAGTGGTGTGGTaGCGGCAGCGGCAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PNVGNVTCGVASRALKLLGPVVW*RQRQRG Trigger: CCCACGCTGCCGCTGCCGCCACCACACCACTGGCCC...CAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GTCGTCGTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCAGCGCCAGGGCGCAATCCAGAAGTCACTaGCGTCCCTCTGCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVVGLRSTAQQEVVSARAQSRSH*RPSASA Trigger: GGCTGAGGCAGAGGGACGCCAGTGACTTCTGGATTG...CGCCCTGGCGCTGACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCACGACGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGTCTCCAGGGCAGCATCATAGCATGGGTCTaGGGTGGCCTGGCTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFCCSRRSGRAHRGLQGSIIAWV*GGLAKE Trigger: CTCCTTAGCCAGGCCACCTCAGACCCATGCTATGAT...GCTGCCCTGGAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGCCTGGGCCAGTGGTGTaGTGGCGGCAGCGGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PNVGNVTCGVASRALKLLPGPVV*WRQRQR Trigger: ACGCTGCCGCTGCCGCCACCACACCACTGGCCCAGG...CAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCAGGATGAGGCGCGCAGGGTCATACCAGTCTCGATGGGATaGGCGACAGCTCTCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: SPGQREAVAVQDEARRVIPVSMG*ATALTP Trigger: GGGTGTGAGAGCTGTCGCCCATCCCATCGAGACTGG...TATGACCCTGCGCGCCTCATCCTGAACCGCCACGGCCTCGCGCTGCCCTGGAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | CACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAGGGTGCTGGGGTGTaGCAGGTCGCCAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HFRSQRRQRHMRSGVTGTEGAGV*QVARAS Trigger: ACTGGCCCTGGCGACCTGCCACACCCCAGCACCCTC...AGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGGGCAGCGCGAGGCCGTaGCGGTTCAGGATGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PNVGNVTCGVASRALKLLGSARP*RFRMRR Trigger: GCGCCTCATCCTGAACCGCCACGGCCTCGCGCTGCC...CAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | ATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACGGCCGGGCCCATCGTaGTCTCCAGGGCAGCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRSGVTGTEASDWLWGLTRPGPS*SPGQRE Trigger: CTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCG...TGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTAGGGCTCCGTGTGGGTaGCAGCAGGCCTCGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGVTGTEASDWLWGLTPRAPCG*QQASAG Trigger: GCCTGCCGAGGCCTGCTGCCACCCACACGGAGCCCT...AGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR TCA 90 bp | GTCATAGTTGTCGTCGTCGTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCGGAAGAGCACAGGTCTaGGAGCAGGGGGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIVVVVVGLRSTAQQEVVGRAQV*EQGAAA Trigger: GGCAGCAGCCCCCTGCTCTCAGACCTGTGCTCTTCC...GACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCACGACGACGACAACTATGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR GCA 90 bp | CAGCGCGAGGCCGTGGCGGTTCAGGATGAGGCGCGCAGGGTCATAGTTGTCGTCAGGGGGCTGCTGCCTTaGCAACCAACTGGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QREAVAVQDEARRVIVVVRGLLP*QPTGSL Trigger: CAGTGACCCAGTTGGTTGGCAAGGCAGCAGCCCCCT...GACGACAACTATGACCCTGCGCGCCTCATCCTGAACCGCCACGGCCTCGCGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCGTCGTCGTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCAGCGCCAACTGGGTCACTGGTaGGAGGCAAAAGCGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SCRRRGSAQHGPAGGSQRQLGHW*EAKARA Trigger: CGCCCTCGCTTTTGCCTCCCACCAGTGACCCAGTTG...GCGCTGACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCACGACGACGACAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | AGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCCCTGGGCCAGTGGTGTaGTGGCGGCAGCGGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQRHMRSGVTGTEASDWLPGPVV*WRQRQR Trigger: ACGCTGCCGCTGCCGCCACCACACCACTGGCCCAGG...GAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCGGCAGCGCGAGGCCGTaGCGGTTCAGGATGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RQRHMRSGVTGTEASDWLGSARP*RFRMRR Trigger: GCGCCTCATCCTGAACCGCCACGGCCTCGCGCTGCC...GAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTGCCGCCCAGCTGTGTaGTGGCGGCACCGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGVTGTEASDWLWGLTPCRPAV*WRHRSH Trigger: GTGTGAGCGGTGCCGCCACCACACAGCTGGGCGGCA...AGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | ACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGACCGCCTCAGACGGCTaGGACGACGACGCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TSGPNVGNVTCGVASRALTASDG*DDDAET Trigger: GGTTTCAGCGTCGTCGTCGCAGCCGTCTGAGGCGGT...CAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | ATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACATCGTCGTCGTGGGTCTaGGCAGCACGGCCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MRSGVTGTEASDWLWGLTSSSWV*AARPSR Trigger: CCTGCTGGGCCGTGCTGCGCAGACCCACGACGACGA...TGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | GCCGTGGCGGTTCAGGATGAGGCGCGCAGGGTCATAGTTGTCGTCGTCGTGGGTTCACTGGCGTCCCTCTaGCTCAGCCCCCTGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: AVAVQDEARRVIVVVVVGSLASL*LSPLRT Trigger: TGTTCTCAGGGGGCTGAGGCAGAGGGACGCCAGTGA...ACCCACGACGACGACAACTATGACCCTGCGCGCCTCATCCTGAACCGCCACGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | TCCGCGCTCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGTCTCCAAGTAGAGCCGGCACCTaGAGAAGAAAAGAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SALLLLQSPQRPGPSWSPSRAGT*RRKECP Trigger: AGGACACTCTTTTCTTCTCCAGGTGCCGGCTCTACT...TGGAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGAGCGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGAGGCAGGGCCAGGGCTaGCTGCAGGAAGAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNVGNVTCGVASRALKLLRQGQG*LQEEHR Trigger: CCTGTGCTCTTCCTGCAGCCAGCCCTGGCCCTGCCT...CAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR CCA 90 bp | CACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCGCGTGGCCGTGGCACTaGCAGCGGCCTCTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMRSGVTGTEASDWLWGLAWPWH*QRPLTP Trigger: TGGAGTAAGAGGCCGCTGCCAGTGCCACGGCCACGC...GAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCGAGGGTGCTGGGGTGTaGCAGGTCGCCAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQRHMRSGVTGTEASDWLEGAGV*QVARAS Trigger: ACTGGCCCTGGCGACCTGCCACACCCCAGCACCCTC...GAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | AACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTCGGCCGGGCCCATCGTaGTCTCCAGGGCAGCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVGNVTCGVASRALKLLIRPGPS*SPGQRE Trigger: CTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCG...AATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | AGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACAGGGCTCCGTGTGGGTaGCAGCAGGCCTCGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGVTGTEASDWLWGLTPYRAPCG*QQASAG Trigger: GCCTGCCGAGGCCTGCTGCCACCCACACGGAGCCCT...GTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCGCCCAGCTGTGTGGTaGCGGCACCGCTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: GPNVGNVTCGVASRALKLRPAVW*RHRSHT Trigger: TGTGTGTGAGCGGTGCCGCCACCACACAGCTGGGCG...AAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | CACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCAGGGCCAGGGCTGGCTaGAGGAAGAGCACAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMRSGVTGTEASDWLWGLRARAG*RKSTGL Trigger: CAGACCTGTGCTCTTCCTGCAGCCAGCCCTGGCCCT...GAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR CCA 90 bp | CTCACTTTAGTTCCTGGGCCCAGGGCTCCGTGTGGGTGGCAGCAGGCCTCGGCAAGAAAGAACCAGGGCTaGAGGTCCCGCTGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLVPGPRAPCGWQQASARKNQG*RSRCAE Trigger: TTCTGCACAGCGGGACCTCCAGCCCTGGTTCTTTCT...TGCCGAGGCCTGCTGCCACCCACACGGAGCCCTGGGCCCAGGAACTAAAGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | ATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACAGCGTGGCCGTGGCACTaGCAGCGGCCTCTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRSGVTGTEASDWLWGLTAWPWH*QRPLTP Trigger: TGGAGTAAGAGGCCGCTGCCAGTGCCACGGCCACGC...TGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | ACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGCCAGTCTCGATGGGATaGGCGACAGCTCTCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGPNVGNVTCGVASRALPVSMG*ATALTP Trigger: GGGTGTGAGAGCTGTCGCCCATCCCATCGAGACTGG...CAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GTCATAGTTGTCGTCGTCGTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCCAGGGCCAGTCTCGATaGGATGGGCGACAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIVVVVVGLRSTAQQEVVQGQSR*DGRQLS Trigger: TGAGAGCTGTCGCCCATCCCATCGAGACTGGCCCTG...GACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCACGACGACGACAACTATGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR TCA 90 bp | ACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGTGCATGTCAGGCCTGTaGCCCCTAACTTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSGPNVGNVTCGVASRALCMSGL*PLTCRS Trigger: GCTCCTGCAAGTTAGGGGTCACAGGCCTGACATGCA...CAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR TCA 90 bp | TTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCCACGCACGCTGTTTaGACACAGCCAGCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRSQRRQRHMRSGVTGTEATHAV*TQPARA Trigger: TGCACGTGCTGGCTGTGTTCAAACAGCGTGCGTGGC...TTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTCCAGTCTCGATGGGATaGGCGACAGCTCTCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: RSGVTGTEASDWLWGLTPPVSMG*ATALTP Trigger: GGGTGTGAGAGCTGTCGCCCATCCCATCGAGACTGG...AGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | TTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAACAGGGCCAGTCTCGATaGGATGGGCGACAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRSQRRQRHMRSGVTGTEQGQSR*DGRQLS Trigger: TGAGAGCTGTCGCCCATCCCATCGAGACTGGCCCTG...TTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCCCGTTGCTCCAATTaGGTGGCACTGGCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSQRRQRHMRSGVTGTEASRCSN*VALAGQ Trigger: TTGCCCTGCCAGTGCCACCCAATTGGAGCAACGGGA...AGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR CCA 90 bp | CGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTGTTGCTCCAATTGGGTaGCACTGGCAGGCCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSQRRQRHMRSGVTGTEAVAPIG*HWQALH Trigger: ATGCAGGGCCTGCCAGTGCCACCCAATTGGAGCAAC...AGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | GTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACAACCGCCTCAGACGGCTaGGACGACGACGCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VASRALKLLIGSGDSHLTTASDG*DDDAET Trigger: GGTTTCAGCGTCGTCGTCGCAGCCGTCTGAGGCGGT...TGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | CGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTGGCCTCTTACTCCAGTaGTCACCAGCCCTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSQRRQRHMRSGVTGTEAGLLLQ*SPALLF Trigger: GAAAAGCAGGGCTGGTGACCACTGGAGTAAGAGGCC...AGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACAACAGCTCTCACACCCTaGGCCAGTGGTGTGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VASRALKLLIGSGDSHLTTALTP*ASGVVA Trigger: CGCCACCACACCACTGGCCCAGGGTGTGAGAGCTGT...TGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGACTCACACCTTACATTAGTAGCTCACTTTAGTTCCTGGGCCCAGGGCGAGGGTGCTGGGGTGTaGCAGGTCGCCAGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGDSHLTLVAHFSSWAQGEGAGV*QVARAS Trigger: ACTGGCCCTGGCGACCTGCCACACCCCAGCACCCTC...GCCCTGGGCCCAGGAACTAAAGTGAGCTACTAATGTAAGGTGTGAGTCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR TCA 90 bp | CCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATCATAGCATGGGTCTaGGGTGGCCTGGCTAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNVGNVTCGVASRALKLLIIAWV*GGLAKE Trigger: CTCCTTAGCCAGGCCACCTCAGACCCATGCTATGAT...CAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR TCA 90 bp | GTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTGCATGTCAGGCCTGTaGCCCCTAACTTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGNVTCGVASRALKLLIGCMSGL*PLTCRS Trigger: GCTCCTGCAAGTTAGGGGTCACAGGCCTGACATGCA...GCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | AACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGGTCAGACTACTGTTaGAGGCAGGGCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVGNVTCGVASRALKLLIGSDYC*RQGQGW Trigger: CCAGCCCTGGCCCTGCCTGCAACAGTAGTCTGACCC...AATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR GCA 90 bp | CGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAGCTTCGTCGTCGTGGGTCTaGGCAGCACGGCCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RALKLLIGSGDSHLTLVASSSWV*AARPSR Trigger: CCTGCTGGGCCGTGCTGCGCAGACCCACGACGACGA...AGCTACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | AGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACGGCGGGCATGCTGATTaGAGGAACAGGGCAAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SGVTGTEASDWLWGLTPYGGHAD*RNRAST Trigger: CGTGCTTGCCCTGTTCCTGCAATCAGCATGCCCGCC...GTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | TTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAAACCAACTGGGTCACTaGTGGGAGGCAAAAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRSQRRQRHMRSGVTGTENQLGH*WEAKAR Trigger: CCTCGCTTTTGCCTCCCACCAGTGACCCAGTTGGTT...TTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR CCA 90 bp | CGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTGGCCTCTTACTCCAGTaGTCACCAGCCCTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSGVTGTEASDWLWGLTPGLLLQ*SPALLF Trigger: GAAAAGCAGGGCTGGTGACCACTGGAGTAAGAGGCC...AGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | ATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACAAGCTGGCCACTATCCTaGTCTTGGGGCCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MRSGVTGTEASDWLWGLTSWPLS*SWGLEK Trigger: CTTCTCCAGGCCCCAAGACCAGGATAGTGGCCAGCT...TGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATCCCGTTGCTCCAATTaGGTGGCACTGGCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VASRALKLLIGSGDSHLTSRCSN*VALAGP Trigger: AGGGCCTGCCAGTGCCACCCAATTGGAGCAACGGGA...TGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR TCA 90 bp | GTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTGGAAGAGCACAGGTCTaGGAGCAGGGGGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGTEASDWLWGLTPYISGRAQV*EQGAAA Trigger: GGCAGCAGCCCCCTGCTCTCAGACCTGTGCTCTTCC...ACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR TCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTACAGGGCAAGCACGGGTaGGGGTGCTGGGGTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVQGKHG*GCWGVA Trigger: TGCCACACCCCAGCACCCTCACCCGTGCTTGCCCTG...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | CTTACATTAGTAGCTCACTTTAGTTCCTGGGCCCAGGGCTCCGTGTGGGTGGCACTGGAGGTCCCGCTGTaGAGAAACGCAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLVAHFSSWAQGSVWVALEVPL*RNAGSQ Trigger: CTGTGACCCTGCGTTTCTGCACAGCGGGACCTCCAG...TGCCACCCACACGGAGCCCTGGGCCCAGGAACTAAAGTGAGCTACTAATGTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR GCA 90 bp | GGGGACTCACACCTTACATTAGTAGCTCACTTTAGTTCCTGGGCCCAGGGCTCCGGCCACTGGTCTGGTTaGACATCCCTCCCGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDSHLTLVAHFSSWAQGSGHWSG*TSLPLL Trigger: GAGCAACGGGAGGGATGTGCAACCAGACCAGTGGCC...GGAGCCCTGGGCCCAGGAACTAAAGTGAGCTACTAATGTAAGGTGTGAGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS-3UTR CCA 90 bp | GTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCAGAAAGAACCAGGGCTaGAGGTCCCGCTGTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGNVTCGVASRALKLLIGRKNQG*RSRCAE Trigger: TTCTGCACAGCGGGACCTCCAGCCCTGGTTCTTTCT...GCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR CCA 90 bp | AGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACGTCCCTCCAGAACCCTaGCTGGCAGTAGTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGVTGTEASDWLWGLTPYVPPEP*LAVVTV Trigger: CACTGTCACTACTGCCAGCCAGGGTTCTGGAGGGAC...GTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTACAGCTCTCACACCCTaGGCCAGTGGTGTGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTGTEASDWLWGLTPYISTALTP*ASGVVA Trigger: CGCCACCACACCACTGGCCCAGGGTGTGAGAGCTGT...ACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCCCTGGTCTTGGGGCCTaGAGAAGAAAAGAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRHMRSGVTGTEASDWLPGLGA*RRKECP Trigger: AGGACACTCTTTTCTTCTCCAGGCCCCAAGACCAGG...GAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR TCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTACAGCGGCGGGCATGCTaGTTGCAGGAACAGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVQRRAC*LQEQGK Trigger: CTTGCCCTGTTCCTGCAATCAGCATGCCCGCCGCTG...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | GTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTGGCCACTGGTCTGGTTaGACATCCCTCCCGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGTEASDWLWGLTPYISGHWSG*TSLPLL Trigger: GAGCAACGGGAGGGATGTGCAACCAGACCAGTGGCC...ACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTCAACTGGGTCACTGGTaGGAGGCAAAAGCGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTGTEASDWLWGLTPYISQLGHW*EAKARA Trigger: CGCCCTCGCTTTTGCCTCCCACCAGTGACCCAGTTG...ACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR CCA 90 bp | CGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAGCTCAGGGCCAGTCTCGATaGGATGGGCGACAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RALKLLIGSGDSHLTLVAQGQSR*DGRQLS Trigger: TGAGAGCTGTCGCCCATCCCATCGAGACTGGCCCTG...AGCTACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTCCAATTGGGTGGCACTaGCAGGCCCTGCATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGTEASDWLWGLTPYISPIGWH*QALHAL Trigger: CAAGGCATGCAGGGCCTGCCAGTGCCACCCAATTGG...ACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR TCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAGCCACGCACGCTGTTTaGACACAGCCAGCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVATHAV*TQPARA Trigger: TGCACGTGCTGGCTGTGTTCAAACAGCGTGCGTGGC...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR TCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAGCCCTGCATGCCTTGTaGCTAGTGATGGGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVALHAL*LVMGWL Trigger: GAGCCAGCCCATCACTAGTCACAAGGCATGCAGGGC...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR GCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAAGGGGGCTGCTGCCTTaGCAACCAACTGGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVRGLLP*QPTGSL Trigger: CAGTGACCCAGTTGGTTGGCAAGGCAGCAGCCCCCT...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR GCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTACTGGAGGTCCCGCTGTaGAGAAACGCAGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVLEVPL*RNAGSQ Trigger: CTGTGACCCTGCGTTTCTGCACAGCGGGACCTCCAG...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR GCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAGGCCACTGGTCTGGTTaGACATCCCTCCCGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVGHWSG*TSLPLL Trigger: GAGCAACGGGAGGGATGTGCAACCAGACCAGTGGCC...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | AACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTCCACTATCCTGGTCTTaGGGCCTGGAGAAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVGNVTCGVASRALKLLIPLSWS*GLEKKR Trigger: TCTTTTCTTCTCCAGGCCCCAAGACCAGGATAGTGG...AATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR CCA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAAGTAGAGCCGGCACCTaGAGAAGAAAAGAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRALKLLIGSGDSHLTLVSRAGT*RRKECP Trigger: AGGACACTCTTTTCTTCTCCAGGTGCCGGCTCTACT...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS TCA 90 bp | CCCAGGCCTCCTGGCCACCGCGGCGCACGGGCCACGCACGCTGTTTaGACACAGCCAGCACGTGCACGGCCAGCCGCCACCACTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRPPGHRGARATHAV*TQPARARPAATTRG Trigger: GCCCCGAGTGGTGGCGGCTGGCCGTGCACGTGCTGGCTGTGTTCAAACAGCGTGCGTGGCCCGTGCGCCGCGGTGGCCAGGAGGCCTGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | CAGTGGTGTGGTGGCGGCAGCGGCAGCGTGGGGGCTGGGCCCGAGTaGCACAGCGGGCAGCGTGGCCGTGGCACTGGCAGCGGCCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QWCGGGSGSVGAGPE*HSGQRGRGTGSGLL Trigger: TAAGAGGCCGCTGCCAGTGCCACGGCCACGCTGCCCGCTGTGCCACTCGGGCCCAGCCCCCACGCTGCCGCTGCCGCCACCACACCACTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS-3UTR CAA 90 bp | GCCGCAGCGGCCGGGCCCATCGTGGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTCCAGGACCACAGCGATaGCATGTCAGGCCTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAGPIVVSRAARGRGGPGPQR*HVRPVT Trigger: GGTCACAGGCCTGACATGCAATCGCTGTGGTCCTGG...ACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCGCTGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | GGGGGCTGGGCCCGAGTGGCACAGCGGGCAGCGTGGCCGTGGCACTaGCAGCGGCCTCTTACTCCAGTGGTCACCAGCCCTGCTTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGWARVAQRAAWPWH*QRPLTPVVTSPAFP Trigger: GGGAAAAGCAGGGCTGGTGACCACTGGAGTAAGAGGCCGCTGCCAGTGCCACGGCCACGCTGCCCGCTGTGCCACTCGGGCCCAGCCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS-3UTR CAA 90 bp | AGCGGCCGGGCCCATCGTGGTCTCCAGGGCAGCGCGAGGCCGTGGCGGTTCAGGAGGGTCAGACTACTGTaGCAGGCAGGGCCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRAHRGLQGSARPWRFRRVRLL*QAGPGL Trigger: CAGCCCTGGCCCTGCCTGCAACAGTAGTCTGACCCT...CCTGAACCGCCACGGCCTCGCGCTGCCCTGGAGACCACGATGGGCCCGGCCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | AGGGTGCTGGGGTGTGGCAGGTCGCCAGGGCCAGTCTCGATGGGATaGGCGACAGCTCTCACACCCTGGGCCAGTGGTGTGGTGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVLGCGRSPGPVSMG*ATALTPWASGVVAA Trigger: TGCCGCCACCACACCACTGGCCCAGGGTGTGAGAGCTGTCGCCCATCCCATCGAGACTGGCCCTGGCGACCTGCCACACCCCAGCACCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | TTGGGTGGCACTGGCAGGGCAAGCACGGGTGAGGGTGCTGGGGTGTaGCAGGTCGCCAGGGCCAGTCTCGATGGGATGGGCGACAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGGTGRASTGEGAGV*QVARASLDGMGDSS Trigger: AGAGCTGTCGCCCATCCCATCGAGACTGGCCCTGGCGACCTGCCACACCCCAGCACCCTCACCCGTGCTTGCCCTGCCAGTGCCACCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS-3UTR CAA 90 bp | TCCTTCTGCTGCAGTCGCCGCAGCGGCCGGGCCCATCGTGGTCTCCAGGGCAGCCCTGTGACCCCTAACTaGCAGGAGCACTGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFCCSRRSGRAHRGLQGSPVTPN*QEHWPL Trigger: CAGTGGCCAGTGCTCCTGCAAGTTAGGGGTCACAGG...GCTGCCCTGGAGACCACGATGGGCCCGGCCGCTGCGGCGACTGCAGCAGAAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | GCTGATTGCAGGAACAGGGCAAGCACGGGTGAGGGTGCTGGGGTGTaGCAGGTCGCCAGGGCCAGTCTCGATGGGATGGGCGACAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ADCRNRASTGEGAGV*QVARASLDGMGDSS Trigger: AGAGCTGTCGCCCATCCCATCGAGACTGGCCCTGGCGACCTGCCACACCCCAGCACCCTCACCCGTGCTTGCCCTGTTCCTGCAATCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR CAA 90 bp | AGTTGTCGTCGTCGTGGGTCTGCGCAGCACGGCCCAGCAGGAGGTAGTCAGCGCCTCCCGTTGCTCCAATaGGGTGGCACTGGCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCRRRGSAQHGPAGGSQRLPLLQ*GGTGRA Trigger: TGCCCTGCCAGTGCCACCCAATTGGAGCAACGGGAG...GCGCTGACTACCTCCTGCTGGGCCGTGCTGCGCAGACCCACGACGACGACAACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | TGCCTTGTGACTAGTGATGGGCTGGCTCGGGTCCCTCCAGAACCCTaGCTGGCAGTAGTGACAGTGCCGCCCAGCTGTGTGGTGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLVTSDGLARVPPEP*LAVVTVPPSCVVAA Trigger: TGCCGCCACCACACAGCTGGGCGGCACTGTCACTACTGCCAGCCAGGGTTCTGGAGGGACCCGAGCCAGCCCATCACTAGTCACAAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS GCA 90 bp | AGGGCTGGCTGCAGGAAGAGCACAGGTCTGAGAGCAGGGGGCTGCTaGCTTGCCAACCAACTGGGTCACTGGTGGGAGGCAAAAGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAGCRKSTGLRAGGC*LANQLGHWWEAKAR Trigger: CCTCGCTTTTGCCTCCCACCAGTGACCCAGTTGGTTGGCAAGGCAGCAGCCCCCTGCTCTCAGACCTGTGCTCTTCCTGCAGCCAGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS GCA 90 bp | GCCGTGGCACTGGCAGCGGCCTCTTACTCCAGTGGTCACCAGCCCTaGTTTTCCCCCGAACTCCACACGGAGGTAGCTGGCCACTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AVALAAASYSSGHQP*FSPELHTEVAGHYP Trigger: AGGATAGTGGCCAGCTACCTCCGTGTGGAGTTCGGGGGAAAAGCAGGGCTGGTGACCACTGGAGTAAGAGGCCGCTGCCAGTGCCACGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | CTGAGAGCAGGGGGCTGCTGCCTTGCCAACCAACTGGGTCACTGGTaGGAGGCAAAAGCGAGGGCGCCCTCCTGGATCATAGCATGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRAGGCCLANQLGHW*EAKARAPSWIIAWV Trigger: GACCCATGCTATGATCCAGGAGGGCGCCCTCGCTTTTGCCTCCCACCAGTGACCCAGTTGGTTGGCAAGGCAGCAGCCCCCTGCTCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | GGTCTGAGAGCAGGGGGCTGCTGCCTTGCCAACCAACTGGGTCACTaGTGGGAGGCAAAAGCGAGGGCGCCCTCCTGGATCATAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GLRAGGCCLANQLGH*WEAKARAPSWIIAW Trigger: CCATGCTATGATCCAGGAGGGCGCCCTCGCTTTTGCCTCCCACCAGTGACCCAGTTGGTTGGCAAGGCAGCAGCCCCCTGCTCTCAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCCGGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGCCAGGACCACAGCGATaGCATGTCAGGCCTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: TSGPNVGNVTCGVASRALPGPQR*HVRPVT Trigger: GGTCACAGGCCTGACATGCAATCGCTGTGGTCCTGG...CAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACCGGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS TCA 90 bp | TGGGAGGCAAAAGCGAGGGCGCCCTCCTGGATCATAGCATGGGTCTaGGGTGGCCTGGCTAAGGAGGAGCAAGAGGCTGAGGGTAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: WEAKARAPSWIIAWV*GGLAKEEQEAEGNG Trigger: CCCATTACCCTCAGCCTCTTGCTCCTCCTTAGCCAGGCCACCTCAGACCCATGCTATGATCCAGGAGGGCGCCCTCGCTTTTGCCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS GCA 90 bp | CAGTGGCCCAGGCAGCAGAAAGAACCAGGGCTGGAGGTCCCGCTGTaGAGAAACGCAGGGTCACAGATGTCAAGAGGAAGGAGCCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QWPRQQKEPGLEVPL*RNAGSQMSRGRSRP Trigger: TGGACGGCTCCTTCCTCTTGACATCTGTGACCCTGCGTTTCTGCACAGCGGGACCTCCAGCCCTGGTTCTTTCTGCTGCCTGGGCCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS CCA 90 bp | GTCAGGCCTGTGACCCCTAACTTGCAGGAGCACTGGCCACTGGTCTaGTTGCACATCCCTCCCGTTGCTCCAATTGGGTGGCACTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VRPVTPNLQEHWPLV*LHIPPVAPIGWHWQ Trigger: CTGCCAGTGCCACCCAATTGGAGCAACGGGAGGGATGTGCAACCAGACCAGTGGCCAGTGCTCCTGCAAGTTAGGGGTCACAGGCCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAACGTAGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTTGGCCACTGGTCTGGTaGCACATCCCTCCCGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPNVGNVTCGVASRALKLWPLVW*HIPPVA Trigger: AGCAACGGGAGGGATGTGCAACCAGACCAGTGGCCA...AAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCTACGTTGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CAA 90 bp | CACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCCCAGGACCACAGCGATaGCATGTCAGGCCTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HMRSGVTGTEASDWLWGLPGPQR*HVRPVT Trigger: GGTCACAGGCCTGACATGCAATCGCTGTGGTCCTGG...GAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CAA 90 bp | GTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACAAGGGTCAGACTACTGTaGCAGGCAGGGCCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VASRALKLLIGSGDSHLTRVRLL*QAGPGL Trigger: CAGCCCTGGCCCTGCCTGCAACAGTAGTCTGACCCT...TGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS-3UTR CAA 90 bp | GTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACACTCCCGTTGCTCCAATaGGGTGGCACTGGCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VASRALKLLIGSGDSHLTLPLLQ*GGTGRA Trigger: TGCCCTGCCAGTGCCACCCAATTGGAGCAACGGGAG...TGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107742.11 |
||
| CDS TCA 90 bp | AGGGGTAGTTGTTGCCTCTGGAATTCGTTGGCAGGGCATCCTGGGTaGGCGGCTCTGCTGGTAGCCAGGACCACAGCGATTGCATGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGSCCLWNSLAGHPG*AALLVARTTAIACQ Trigger: CTGACATGCAATCGCTGTGGTCCTGGCTACCAGCAGAGCCGCTCACCCAGGATGCCCTGCCAACGAATTCCAGAGGCAACAACTACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS-3UTR CAA 90 bp | AGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACCCTGTGACCCCTAACTaGCAGGAGCACTGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGVTGTEASDWLWGLTPYPVTPN*QEHWPL Trigger: CAGTGGCCAGTGCTCCTGCAAGTTAGGGGTCACAGG...GTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS-3UTR CAA 90 bp | AGGCAACGTCACATGCGGAGTGGCGTCACGGGCACTGAAGCTTCTGATTGGCTCGCCACTATCCTGGTCTaGGGGCCTGGAGAAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQRHMRSGVTGTEASDWLATILV*GPGEEK Trigger: CTTTTCTTCTCCAGGCCCCAAGACCAGGATAGTGGC...GAGCCAATCAGAAGCTTCAGTGCCCGTGACGCCACTCCGCATGTGACGTTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR CAA 90 bp | CGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTAGCTCTCCCGTTGCTCCAATaGGGTGGCACTGGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RALKLLIGSGDSHLTLVALPLLQ*GGTGRP Trigger: GGGCCTGCCAGTGCCACCCAATTGGAGCAACGGGAG...AGCTACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS-3UTR CAA 90 bp | TCACGGGCACTGAAGCTTCTGATTGGCTCTGGGGACTCACACCTTACATTAGTACCTGTGACCCCTAACTaGCAGGAGCACTGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SRALKLLIGSGDSHLTLVPVTPN*QEHWPL Trigger: CAGTGGCCAGTGCTCCTGCAAGTTAGGGGTCACAGG...TACTAATGTAAGGTGTGAGTCCCCAGAGCCAATCAGAAGCTTCAGTGCCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS TCA 90 bp | CACACTGCTGACGGAGACATTGCAATAGCCTTGACACTGTGGGTCTaGTCGAGATGCAACAGGGGTAGTAGCAGGGGTAGTTGTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTADGDIAIALTLWV*SRCNRGSSRGSCCL Trigger: GAGGCAACAACTACCCCTGCTACTACCCCTGTTGCATCTCGATCAGACCCACAGTGTCAAGGCTATTGCAATGTCTCCGTCAGCAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS TCA 90 bp | CATAATCCTGCTGACAGTATCTCTGAAGGCTCATGTGCACACTGCTaGCGGAGACATTGCAATAGCCTTGACACTGTGGGTCTGATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: HNPADSISEGSCAHC*RRHCNSLDTVGLIE Trigger: CTCGATCAGACCCACAGTGTCAAGGCTATTGCAATGTCTCCGTCAGCAGTGTGCACATGAGCCTTCAGAGATACTGTCAGCAGGATTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CAA 90 bp | ACCCAGGCCTCCTGGCCACCGCGGCGCACGGGCCACGCACGCTGTTaGAACACAGCCAGCACGTGCACGGCCAGCCGCCACCACTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TQASWPPRRTGHARC*NTASTCTASRHHSG Trigger: CCCCGAGTGGTGGCGGCTGGCCGTGCACGTGCTGGCTGTGTTCAAACAGCGTGCGTGGCCCGTGCGCCGCGGTGGCCAGGAGGCCTGGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | GGCTGGGCCCGAGTGGCACAGCGGGCAGCGTGGCCGTaGCACTGGCAGCGGCCTCTTACTCCAGTGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GWARVAQRAAWP*HWQRPLTPVVT Trigger: GGTGACCACTGGAGTAAGAGGCCGCTGCCAGTGCCACGGCCACGCTGCCCGCTGTGCCACTCGGGCCCAGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | GCCCGAGTGGCACAGCGGGCAGCGTGGCCGTGGCACTaGCAGCGGCCTCTTACTCCAGTGGTCACCAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARVAQRAAWPWH*QRPLTPVVTSP Trigger: AGGGCTGGTGACCACTGGAGTAAGAGGCCGCTGCCAGTGCCACGGCCACGCTGCCCGCTGTGCCACTCGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | CCGCAGATTAGGTCAGCACGTGGCACCCAGGCCTCCTaGCCACCGCGGCGCACGGGCCACGCACGCTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PQIRSARGTQAS*PPRRTGHARCL Trigger: CAAACAGCGTGCGTGGCCCGTGCGCCGCGGTGGCCAGGAGGCCTGGGTGCCACGTGCTGACCTAATCTGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS GCA 72 bp | AGCCGCCACCACTCGGGGCCCACCGCCTCAGACGGCTaGGACGACGACGCTGAAACCTGGGCGTGCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SRHHSGPTASDG*DDDAETWACRT Trigger: TGTTCTGCACGCCCAGGTTTCAGCGTCGTCGTCGCAGCCGTCTGAGGCGGTGGGCCCCGAGTGGTGGCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS GCA 72 bp | AGCCGCCACCACTCGGGGCCCACCGCCTCAGACGGCTaGGACGACGACGCTGAAACCTGGGCGTGCAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SRHHSGPTASDG*DDDAETWACRI Trigger: GATTCTGCACGCCCAGGTTTCAGCGTCGTCGTCGCAGCCGTCTGAGGCGGTGGGCCCCGAGTGGTGGCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | GGGTGTGGCAGGTCGCCAGGGCCAGTCTCGATGGGATaGGCGACAGCTCTCACACCCTGGGCCAGTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCGRSPGPVSMG*ATALTPWASGV Trigger: CACACCACTGGCCCAGGGTGTGAGAGCTGTCGCCCATCCCATCGAGACTGGCCCTGGCGACCTGCCACACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | TGCTGGGGTGTGGCAGGTCGCCAGGGCCAGTCTCGATaGGATGGGCGACAGCTCTCACACCCTGGGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CWGVAGRQGQSR*DGRQLSHPGPV Trigger: CACTGGCCCAGGGTGTGAGAGCTGTCGCCCATCCCATCGAGACTGGCCCTGGCGACCTGCCACACCCCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS TCA 72 bp | GCAGGGCCAGGGCTGGCTGCAGGAAGAGCACAGGTCTaGGAGCAGGGGGCTGCTGCCTTGCCAACCAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGPGLAAGRAQV*EQGAAALPTNW Trigger: CCAGTTGGTTGGCAAGGCAGCAGCCCCCTGCTCTCAGACCTGTGCTCTTCCTGCAGCCAGCCCTGGCCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | GCAGGGGGCTGCTGCCTTGCCAACCAACTGGGTCACTaGTGGGAGGCAAAAGCGAGGGCGCCCTCCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: AGGCCLANQLGH*WEAKARAPSWI Trigger: GATCCAGGAGGGCGCCCTCGCTTTTGCCTCCCACCAGTGACCCAGTTGGTTGGCAAGGCAGCAGCCCCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS TCA 72 bp | GGGGCCCACCGCCTCAGACGGCTGCGACGACGACGCTaGAACCTGGGCGTGCAGAACATAATCCTGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: GAHRLRRLRRRR*NLGVQNIILLT Trigger: TGTCAGCAGGATTATGTTCTGCACGCCCAGGTTTCAGCGTCGTCGTCGCAGCCGTCTGAGGCGGTGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 |
||
| CDS GCA 72 bp | CTGGCAGCGGCCTCTTACTCCAGTGGTCACCAGCCCTaGTTTTCCCCCGAACTCCACACGGAGGTAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LAAASYSSGHQP*FSPELHTEVAG Trigger: GCCAGCTACCTCCGTGTGGAGTTCGGGGGAAAAGCAGGGCTGGTGACCACTGGAGTAAGAGGCCGCTGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | GGGGGCTGCTGCCTTGCCAACCAACTGGGTCACTGGTaGGAGGCAAAAGCGAGGGCGCCCTCCTGGATCATA | + |
|
Preference number: 6 (lower is better) Translates to: GGCCLANQLGHW*EAKARAPSWII Trigger: TATGATCCAGGAGGGCGCCCTCGCTTTTGCCTCCCACCAGTGACCCAGTTGGTTGGCAAGGCAGCAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | ACTAGTGATGGGCTGGCTCGGGTCCCTCCAGAACCCTaGCTGGCAGTAGTGACAGTGCCGCCCAGCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSDGLARVPPEP*LAVVTVPPSCV Trigger: CACACAGCTGGGCGGCACTGTCACTACTGCCAGCCAGGGTTCTGGAGGGACCCGAGCCAGCCCATCACTAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS CAA 90 bp | AGGCCTGTGACCCCTAACTTGCAGGAGCACTGGCCACTGGTCTGGTaGCACATCCCTCCCGTTGCTCCAATTGGGTGGCACTGGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RPVTPNLQEHWPLVW*HIPPVAPIGWHWQG Trigger: GCCCTGCCAGTGCCACCCAATTGGAGCAACGGGAGGGATGTGCAACCAGACCAGTGGCCAGTGCTCCTGCAAGTTAGGGGTCACAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS CAA 90 bp | AGGCCTGTGACCCCTAACTTGCAGGAGCACTGGCCACTGGTCTGGTaGCACATCCCTCCCGTTGCTCCAATTGGGTGGCACTGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPVTPNLQEHWPLVW*HIPPVAPIGWHWQA Trigger: GGCCTGCCAGTGCCACCCAATTGGAGCAACGGGAGGGATGTGCAACCAGACCAGTGGCCAGTGCTCCTGCAAGTTAGGGGTCACAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS GCA 72 bp | CGTTGCTCCAATTGGGTGGCACTGGCAGGCCCTGCATaGCTTGTGACTAGTGATGGGCTGGCTCGGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCSNWVALAGPA*LVTSDGLARVP Trigger: AGGGACCCGAGCCAGCCCATCACTAGTCACAAGGCATGCAGGGCCTGCCAGTGCCACCCAATTGGAGCAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182750.10 |
||
| CDS CAA 72 bp | CACTGGTCTGGTTGCACATCCCTCCCGTTGCTCCAATaGGGTGGCACTGGCAGGGCAAGCACGGGTGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HWSGCTSLPLLQ*GGTGRASTGEG Trigger: ACCCTCACCCGTGCTTGCCCTGCCAGTGCCACCCAATTGGAGCAACGGGAGGGATGTGCAACCAGACCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS TCA 72 bp | AAAGCGAGGGCGCCCTCCTGGATCATAGCATGGGTCTaGGGTGGCCTGGCTAAGGAGGAGCAAGAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KARAPSWIIAWV*GGLAKEEQEAE Trigger: CTCAGCCTCTTGCTCCTCCTTAGCCAGGCCACCTCAGACCCATGCTATGATCCAGGAGGGCGCCCTCGCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS TCA 72 bp | GGTAGCCAGGACCACAGCGATTGCATGTCAGGCCTGTaGCCCCTAACTTGCAGGAGCACTGGCCACTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSQDHSDCMSGL*PLTCRSTGHWS Trigger: AGACCAGTGGCCAGTGCTCCTGCAAGTTAGGGGTCACAGGCCTGACATGCAATCGCTGTGGTCCTGGCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS TCA 72 bp | TGTTGCCTCTGGAATTCGTTGGCAGGGCATCCTGGGTaGGCGGCTCTGCTGGTAGCCAGGACCACAGCGATT | + |
|
Preference number: 6 (lower is better) Translates to: CCLWNSLAGHPG*AALLVARTTAI Trigger: AATCGCTGTGGTCCTGGCTACCAGCAGAGCCGCTCACCCAGGATGCCCTGCCAACGAATTCCAGAGGCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||
| CDS CCA 72 bp | ACCGCCTCAGACGGCTGCGACGACGACGCTGAAACCTaGGCGTGCAGAATCTGTAGCCTAAGCCAATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TASDGCDDDAET*ACRICSLSQSR Trigger: TCTGGATTGGCTTAGGCTACAGATTCTGCACGCCCAGGTTTCAGCGTCGTCGTCGCAGCCGTCTGAGGCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS GCA 72 bp | AGGCAGCAGAAAGAACCAGGGCTGGAGGTCCCGCTGTaGAGAAACGCAGGGTCACAGATGTCAAGAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RQQKEPGLEVPL*RNAGSQMSRGR Trigger: CCTTCCTCTTGACATCTGTGACCCTGCGTTTCTGCACAGCGGGACCTCCAGCCCTGGTTCTTTCTGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107742.11 ENSMUST00000183120.4 |
||
| CDS GCA 72 bp | TCAGACGGCTGCGACGACGACGCTGAAACCTGGGCGTaGAGAATCTGTAGCCTAAGCCAATCCAGAAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SDGCDDDAETWA*RICSLSQSRSH Trigger: GTGACTTCTGGATTGGCTTAGGCTACAGATTCTGCACGCCCAGGTTTCAGCGTCGTCGTCGCAGCCGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS TCA 72 bp | TCCAGAAGTCACTGGCGTCCCTCTGCCTCAGCCCCCTaGGAACATAATCCTGCTGACAGTATCTCTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSHWRPSASAP*EHNPADSISEG Trigger: GCCTTCAGAGATACTGTCAGCAGGATTATGTTCTCAGGGGGCTGAGGCAGAGGGACGCCAGTGACTTCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183120.4 |
||
| CDS TCA 72 bp | GCTGACAGTATCTCTGAAGGCTCATGTGCACACTGCTaGCGGAGACATTGCAATAGCCTTGACACTGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ADSISEGSCAHC*RRHCNSLDTVG Trigger: ACCCACAGTGTCAAGGCTATTGCAATGTCTCCGTCAGCAGTGTGCACATGAGCCTTCAGAGATACTGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107742.11 ENSMUST00000182750.10 ENSMUST00000183120.4 |
||