Pregenerated sensors for NTN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020019Ensembl transcript IDs: ENSMUST00000020204.5, ENSMUST00000147080.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTCACTCCAAACTGAGACTTCACACAAAATTCTCCTTTTAGGCTaGCTGTCTACAGTGTTTCTCCCAGTATCTGGAGCTAACAGCATA | + |
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Preference number: 1 (lower is better) Translates to: LSLQTETSHKILLLG*LSTVFLPVSGANSI Trigger: TATGCTGTTAGCTCCAGATACTGGGAGAAACACTGTAGACAGGCAGCCTAAAAGGAGAATTTTGTGTGAAGTCTCAGTTTGGAGTGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCATTATaGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTGAGACTT | + |
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Preference number: 1 (lower is better) Translates to: SLSLSLSLSLSLISL*PVSHNLTSHSKLRL Trigger: AAGTCTCAGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACACAGTGGTGGGGCTTCTaGTTCAGTAGGGTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLSFHYGQYLTQWWGF*FSRVFR Trigger: CCTGAAGACCCTACTGAACCAGAAGCCCCACCACTG...TGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCCTCTCCGTCTACAGTaGTGGGGCTTCTGGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LSLSHFIMASISQSNLSLPLRLQ*WGFWFS Trigger: ACTGAACCAGAAGCCCCACCACTGTAGACGGAGAGG...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTGTTGGAAGGTGGGGTTaGGGGGTCTGTTTCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: LSHFIMASISQSNLSLQTVGRWG*GVCFPK Trigger: TTTAGGGAAACAGACCCCTCAACCCCACCTTCCAAC...AGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCGTTAGACAAGGCCTATaGGATTGGAACATTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LSLSHFIMASISQSNLSLVRQGL*DWNISP Trigger: GGGGGAAATGTTCCAATCGCATAGGCCTTGTCTAAC...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR GCA 90 bp | AGACGGAAGACAATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTGCGTTATTCTCCTTTTAGGCTaGCTGTCTACAGTGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: RRKTMERSKLVNYHIVCVILLLG*LSTVFL Trigger: GAGAAACACTGTAGACAGGCAGCCTAAAAGGAGAAT...AACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCATTGTCTTCCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTGCGTTAGGAAACTGGTATTAGACTTGTGTATCTaGTACCCAGAGAAAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: MERSKLVNYHIVCVRKLVLDLCI*YPEKSP Trigger: AGGGCTTTTCTCTGGGTAGCAGATACACAAGTCTAA...TACCAGTTTCCTAACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR GCA 72 bp | GGTTCAGTAGGGTCTTCAGGCAGCCCCTCTCTTCTCTaGCTGTCAGTAGCAGTCTCCAGACTTTCACAAGTG | + |
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Preference number: 3 (lower is better) Translates to: GSVGSSGSPSLL*LSVAVSRLSQV Trigger: CACTTGTGAAAGTCTGGAGACTGCTACTGACAGGCAGAGAAGAGAGGGGCTGCCTGAAGACCCTACTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR CCA 72 bp | TTCACAATTCCTCTCCGTCTACAGTGGTGGGGCTTCTaGTTCAGTAGGGTCTTCAGGCAGCCCCTCTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: FTIPLRLQWWGF*FSRVFRQPLSS Trigger: AGAAGAGAGGGGCTGCCTGAAGACCCTACTGAACCAGAAGCCCCACCACTGTAGACGGAGAGGAATTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR CCA 72 bp | ATTTCTTTATTCACAATTCCTCTCCGTCTACAGTGGTaGGGCTTCTGGTTCAGTAGGGTCTTCAGGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: ISLFTIPLRLQW*GFWFSRVFRQP Trigger: GGGCTGCCTGAAGACCCTACTGAACCAGAAGCCCCACCACTGTAGACGGAGAGGAATTGTGAATAAAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR CAA 90 bp | GTATCTCACAATCTAACCTCTCACTCCAAACTGAGACTTCACACAAAATTCTCCAGCCGGGAGAAGACCTaGTCAGGGATACAGCCCTTA | + |
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Preference number: 3 (lower is better) Translates to: VSHNLTSHSKLRLHTKFSSREKT*SGIQPL Trigger: TAAGGGCTGTATCCCTGACAAGGTCTTCTCCCGGCT...GGAGAATTTTGTGTGAAGTCTCAGTTTGGAGTGAGAGGTTAGATTGTGAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR CCA 72 bp | TATATATATATATCCCATTCACATCCCGCACACCGATaGCCACACGCAGCACACAAGACAAGGCTCTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: YIYISHSHPAHR*PHAAHKTRLSL Trigger: TAAAGAGAGCCTTGTCTTGTGTGCTGCGTGTGGCCATCGGTGTGCGGGATGTGAATGGGATATATATATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR CCA 72 bp | AAGTACAGTAGAAACTGTCTGCAGCAGGGCTATGCCTaGATAAAGAAGACGGAAGACAATGGAAAGGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: KYSRNCLQQGYA*IKKTEDNGKEQ Trigger: TTGCTCCTTTCCATTGTCTTCCGTCTTCTTTATCCAGGCATAGCCCTGCTGCAGACAGTTTCTACTGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR TCA 72 bp | AGGCAGGTATCGGCTTGGGGTCCTCATTTCTCTTTATaGAACGTGACTGTTTTCAAACAGATCCAGAATGCT | + |
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Preference number: 3 (lower is better) Translates to: RQVSAWGPHFSL*NVTVFKQIQNA Trigger: AGCATTCTGGATCTGTTTGAAAACAGTCACGTTTCATAAAGAGAAATGAGGACCCCAAGCCGATACCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR GCA 72 bp | CAAACTGAGACTTCACACAAAATTCTCCTTTTAGGCTaGCTGTCTACAGTGTTTCTCCCAGTATCTGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: QTETSHKILLLG*LSTVFLPVSGA Trigger: AGCTCCAGATACTGGGAGAAACACTGTAGACAGGCAGCCTAAAAGGAGAATTTTGTGTGAAGTCTCAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTTCTTTTTCATTAGACTaGTGTATCTGCTACCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LSHFIMASISQSNLSLQTSFSLD*CICYPE Trigger: CTCTGGGTAGCAGATACACAAGTCTAATGAAAAAGA...AGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR GCA 72 bp | ATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTaGGTTAGGAAACTGGTACATGTACTGTTAATACAA | + |
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Preference number: 3 (lower is better) Translates to: MERSKLVNYHIV*VRKLVHVLLIQ Trigger: TTGTATTAACAGTACATGTACCAGTTTCCTAACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | AGACGGAAGACAATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTGCGTTGGGAAACCTGAAGGATaGGTCTGCCATGGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RRKTMERSKLVNYHIVCVGKPEG*VCHGRG Trigger: CCCTCTGCCATGGCAGACTCATCCTTCAGGTTTCCC...AACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCATTGTCTTCCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | CATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTGAGACTTGTTCTGCCGTCCGCTaGCTCCCAGGGCCGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: HFIMASISQSNLSLQTETCSAVR*LPGPVI Trigger: AATGACCGGCCCTGGGAGGCAGCGGACGGCAGAACA...AGTCTCAGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | GTATCTCACAATCTAACCTCTCACTCCAAACTGAGACTTCACACAAAATTCTCCACCGGTCCAGCACCATaGCTGCAGGCCTGGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: VSHNLTSHSKLRLHTKFSTGPAP*LQAWET Trigger: AGTCTCCCAGGCCTGCAGCCATGGTGCTGGACCGGT...GGAGAATTTTGTGTGAAGTCTCAGTTTGGAGTGAGAGGTTAGATTGTGAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | GAGAAGACCTTGTCAGGGATACAGCCCTTAATGGATGACGGCAATATCACTATTAAGCACTGGTCAGCGTaGCCGTTGCAGAAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: EKTLSGIQPLMDDGNITIKHWSA*PLQKQL Trigger: CAGCTGCTTCTGCAACGGCCACGCTGACCAGTGCTT...AATAGTGATATTGCCGTCATCCATTAAGGGCTGTATCCCTGACAAGGTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAGGCAGTCACCATTGCTaGGGTCGCAGAAGGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLSFHYGQYLTGSHHC*GRRRSL Trigger: CAGTGACCTTCTGCGACCCCAGCAATGGTGACTGCC...TGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CAGCATAGATTTCTTTATTCACAATTCCTCTCCGTCTACAGTGGTGGGGCTTCTATGTCCGGGGAAACCTaGAGGATGAGTCTGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: QHRFLYSQFLSVYSGGASMSGET*RMSLPW Trigger: CCATGGCAGACTCATCCTTCAGGTTTCCCCGGACAT...AGAAGCCCCACCACTGTAGACGGAGAGGAATTGTGAATAAAGAAATCTATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCGCACTCGGAGGTTGGTaGTCTTCAGCTGCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSLSHFIMASISQSNLSLALGGW*SSAAPA Trigger: TGCAGGAGCAGCTGAAGATCACCAACCTCCGAGTGC...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | GTTAGGAAACTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAAGGCAGGACTGTCGCTTaGGCAGCCGCACTCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: VRKLVHVLLIQEGRKLVQGRTVA*AAALGG Trigger: ACCTCCGAGTGCGGCTGCTCAAGCGACAGTCCTGCC...TTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAGTTTCCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCCTGTGCACATCCTCTaGAGACTGCCACCATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LSLSHFIMASISQSNLSLPVHIL*RLPPCP Trigger: CGGACATGGTGGCAGTCTGCAGAGGATGTGCACAGG...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCAGGGGCAGTCACCATTaGTGGGGTCGCAGAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSLSHFIMASISQSNLSLRGSHH*WGRRRS Trigger: TGACCTTCTGCGACCCCAGCAATGGTGACTGCCCCT...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | ATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTGCGTTAGGAAACTGGTACCCAGTATCCCACCATaGATCTGTCGCAATGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: MERSKLVNYHIVCVRKLVPSIPP*ICRNVA Trigger: GGCCACATTGCGACAGATGCATGGTGGGATACTGGG...TACCAGTTTCCTAACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | TGGATAAAGAAGACGGAAGACAATGGAAAGGAGCAAGCTGGTGAACTATCACATGTCTTCCCAAAGTCCTaGGACCGGTCCAGCACCATG | + |
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Preference number: 4 (lower is better) Translates to: WIKKTEDNGKEQAGELSHVFPKS*DRSSTM Trigger: CATGGTGCTGGACCGGTCCCAGGACTTTGGGAAGAC...ATGTGATAGTTCACCAGCTTGCTCCTTTCCATTGTCTTCCGTCTTCTTTATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCCCTCAGTGTTGTGCTaGCAGTTGTTGCAGACACCG | + |
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Preference number: 4 (lower is better) Translates to: LSLSHFIMASISQSNLSLPSVLC*QLLQTP Trigger: CGGTGTCTGCAACAACTGTCAGCACAACACTGAGGG...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CAGCATAGATTTCTTTATTCACAATTCCTCTCCGTCTACAGTGGTGGGGCTTCTAGAAGGTCACTGAGCTaGAAGGAAGGATCGCCGATC | + |
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Preference number: 4 (lower is better) Translates to: QHRFLYSQFLSVYSGGASRRSLS*KEGSPI Trigger: GATCGGCGATCCTTCCTTTCAGCTCAGTGACCTTCT...AGAAGCCCCACCACTGTAGACGGAGAGGAATTGTGAATAAAGAAATCTATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | GAGAAGACCTTGTCAGGGATACAGCCCTTAATGGATGACGGCAATATCACTATTCATGCGAGGGTTGCATaGTTTCTCACAGCGGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: EKTLSGIQPLMDDGNITIHARVA*FLTAGV Trigger: AACTCCCGCTGTGAGAAAGCATGCAACCCTCGCATG...AATAGTGATATTGCCGTCATCCATTAAGGGCTGTATCCCTGACAAGGTCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACACCGGTCATTGTACAATaGTGCACAGTGCTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLSFHYGQYLTPVIVQ*CTVLAV Trigger: CACTGCCAGCACTGTGCACCATTGTACAATGACCGG...TGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CAGCATAGATTTCTTTATTCACAATTCCTCTCCGTCTACAGTGGTGGGGCTTCTGCTTCCAGGTCTAGCTaGATCTTTTCCCTGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: QHRFLYSQFLSVYSGGASASRSS*IFSLCT Trigger: TGTGCACAGGGAAAAGATTCAGCTAGACCTGGAAGC...AGAAGCCCCACCACTGTAGACGGAGAGGAATTGTGAATAAAGAAATCTATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | TATATATATATATATATATATCCCATTCACATCCCGCACACCGATGGCCACACGACGCCTCCCACACGTTaGCGTCGAAGTGACAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: YIYIYIYPIHIPHTDGHTTPPTR*RRSDRC Trigger: ACACCTGTCACTTCGACGTCAACGTGTGGGAGGCGT...CGTGTGGCCATCGGTGTGCGGGATGTGAATGGGATATATATATATATATATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCACTCCAATCCTGGATTaGGGATTGGACAGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSLSHFIMASISQSNLSLTPILD*GLDRCS Trigger: GCTGCACCTGTCCAATCCTCAATCCAGGATTGGAGT...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACATTGGTGATCTTCAGCTaGTCCTGCACTTTGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSLSLSFHYGQYLTLVIFS*SCTLAL Trigger: CAGTGCCAAAGTGCAGGAGCAGCTGAAGATCACCAA...TGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCTGCCTGCTGTGTTGTaGTTACACATACACCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSLSHFIMASISQSNLSLLPAVL*LHIHLP Trigger: CGGGAGGTGTATGTGTAAGCACAACACAGCAGGCAG...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | CTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAATATTCATGTGCATCTGTCGCAATGTaGCCCCGCCACCCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVHVLLIQEGRKLVQYSCASVAM*PRHPRL Trigger: AAGCCTGGGGTGGCGGGGCCACATTGCGACAGATGC...ACATGAATATTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | CAGCATAGATTTCTTTATTCACAATTCCTCTCCGTCTACAGTGGTGGGGCTTCTTCCTGGATTGAGGATTaGACAGGTGCAGCCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QHRFLYSQFLSVYSGGASSWIED*TGAASV Trigger: AACAGAGGCTGCACCTGTCCAATCCTCAATCCAGGA...AGAAGCCCCACCACTGTAGACGGAGAGGAATTGTGAATAAAGAAATCTATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | AGACGGAAGACAATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTGCGTTCAGGTACTCCAATCCTaGATTGAGGATTGGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: RRKTMERSKLVNYHIVCVQVLQS*IEDWTG Trigger: ACCTGTCCAATCCTCAATCCAGGATTGGAGTACCTG...AACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCATTGTCTTCCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | CAGCATAGATTTCTTTATTCACAATTCCTCTCCGTCTACAGTGGTGGGGCTTCTGCTGCTCCTGCACTTTaGCACTGTAAGGGTTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: QHRFLYSQFLSVYSGGASAAPAL*HCKGFL Trigger: TAGAAAACCCTTACAGTGCCAAAGTGCAGGAGCAGC...AGAAGCCCCACCACTGTAGACGGAGAGGAATTGTGAATAAAGAAATCTATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTCCTCCCATTCCCAGCTaGGCTCACTCTTATTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSHFIMASISQSNLSLQTPPIPS*AHSYCA Trigger: TGCACAATAAGAGTGAGCCCAGCTGGGAATGGGAGG...AGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAATATTCATGTTGGGCTGCCGGCAAGTaGGGTCAGCATTCTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: LVHVLLIQEGRKLVQYSCWAAGK*GQHSHC Trigger: ACAGTGAGAATGCTGACCTCACTTGCCGGCAGCCCA...ACATGAATATTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | GGTATCGGCTTGGGGTCCTCATTTCTCTTTATGAAACGTGACTGTTTTCAAACAAAGCCAAGTTTCCCATaGGAGGGTTGCATGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GIGLGSSFLFMKRDCFQTKPSFP*EGCMLS Trigger: AGAAAGCATGCAACCCTCGCATGGGAAACTTGGCTT...TGTTTGAAAACAGTCACGTTTCATAAAGAGAAATGAGGACCCCAAGCCGATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | GTTAGGAAACTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAATACAATGGTGCACAGTaGTGGCAGTGGCTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRKLVHVLLIQEGRKLVQYNGAQ*WQWLPA Trigger: AGCAGGCAGCCACTGCCAGCACTGTGCACCATTGTA...TTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAGTTTCCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | CTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAATATTCATGTTCCACAGGTAAGCACTaGTCAGCGTGGCCGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVHVLLIQEGRKLVQYSCSTGKH*SAWPLQ Trigger: CTGCAACGGCCACGCTGACCAGTGCTTACCTGTGGA...ACATGAATATTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| 3UTR CAA 72 bp | CTTTCAGAACCAGTTTCACTTAAGGCAGGTATCGGCTaGGGGTCCTCATTTCTCTTTATGAAACGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSEPVSLKAGIG*GSSFLFMKRDC Trigger: ACAGTCACGTTTCATAAAGAGAAATGAGGACCCCAAGCCGATACCTGCCTTAAGTGAAACTGGTTCTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | ATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTGCGTTAGGAAACTGGTATTTTTAAGATGTGCATaGCTCTTCTGCCAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MERSKLVNYHIVCVRKLVFLRCA*LFCQEL Trigger: CAGCTCTTGGCAGAAGAGTCATGCACATCTTAAAAA...TACCAGTTTCCTAACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR TCA 90 bp | CTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTTATGTCGTATGGTGGTaGCAGGGCTCTGAAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHFIMASISQSNLSLQTYVVWW*QGSENN Trigger: GTTATTTTCAGAGCCCTGTCACCACCATACGACATA...AGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | GTATCTCACAATCTAACCTCTCACTCCAAACTGAGACTTCACACAAAATTCTCCAGCCGAGCAGTTTGTTaGAAAGTACTTGTAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSHNLTSHSKLRLHTKFSSRAVC*KVLVRL Trigger: AAGCCTTACAAGTACTTTGCAACAAACTGCTCGGCT...GGAGAATTTTGTGTGAAGTCTCAGTTTGGAGTGAGAGGTTAGATTGTGAGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR GCA 90 bp | GAGAAGACCTTGTCAGGGATACAGCCCTTAATGGATGACGGCAATATCACTATTTCTCTTTTTAAGATGTaGATGACTCTTCTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKTLSGIQPLMDDGNITISLFKM*MTLLPR Trigger: TCTTGGCAGAAGAGTCATGCACATCTTAAAAAGAGA...AATAGTGATATTGCCGTCATCCATTAAGGGCTGTATCCCTGACAAGGTCTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS-3UTR CCA 90 bp | TATATATATATATATATATATCCCATTCACATCCCGCACACCGATGGCCACACGTGGGAGCCTTTGTCGTaGGCTGATAAGATCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: YIYIYIYPIHIPHTDGHTWEPLS*ADKILI Trigger: AATCAAGATCTTATCAGCCCACGACAAAGGCTCCCA...CGTGTGGCCATCGGTGTGCGGGATGTGAATGGGATATATATATATATATATATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS-3UTR GCA 90 bp | GTATCTCACAATCTAACCTCTCACTCCAAACTGAGACTTCACACAAAATTCTCCAAAATGGTGAGGTTTTaGGTTCAGGTCGTTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSHNLTSHSKLRLHTKFSKMVRF*VQVVYL Trigger: CAGATAAACGACCTGAACGCAAAACCTCACCATTTT...GGAGAATTTTGTGTGAAGTCTCAGTTTGGAGTGAGAGGTTAGATTGTGAGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CCA 90 bp | GAGAAGACCTTGTCAGGGATACAGCCCTTAATGGATGACGGCAATATCACTATTGTAAGATCTTCAGTTTaGTGGACTTTAAGACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKTLSGIQPLMDDGNITIVRSSV*WTLRLS Trigger: AGAAAGTCTTAAAGTCCACCAAACTGAAGATCTTAC...AATAGTGATATTGCCGTCATCCATTAAGGGCTGTATCCCTGACAAGGTCTTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAATATTCATGTAGAGCTGGTTTCCAGTaGTGGACAAAGCTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LVHVLLIQEGRKLVQYSCRAGFQ*WTKLFI Trigger: TATGAAAAGCTTTGTCCAGCACTGGAAACCAGCTCT...ACATGAATATTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS TCA 90 bp | CCCTGTGCACATCCTCTGCAGACTGCCACCATGTCCGGGGAAACCTaGAGGATGAGTCTGCCATGGCAGAGGGTGGGTGAGCCAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PCAHPLQTATMSGET*RMSLPWQRVGEPGE Trigger: CTCACCTGGCTCACCCACCCTCTGCCATGGCAGACTCATCCTTCAGGTTTCCCCGGACATGGTGGCAGTCTGCAGAGGATGTGCACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
||
| CDS TCA 90 bp | TGCAGGGGCAGTCACCATTGCTGGGGTCGCAGAAGGTCACTGAGCTaGAAGGAAGGATCGCCGATCCAACCGGGTGGCAGGAACACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CRGSHHCWGRRRSLS*KEGSPIQPGGRNTL Trigger: AAGCGTGTTCCTGCCACCCGGTTGGATCGGCGATCCTTCCTTTCAGCTCAGTGACCTTCTGCGACCCCAGCAATGGTGACTGCCCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS TCA 90 bp | AGGCTTGCAGGGGCAGTCACCATTGCTGGGGTCGCAGAAGGTCACTaGGCTGAAAGGAAGGATCGCCGATCCAACCGGGTGGCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RLAGAVTIAGVAEGH*AERKDRRSNRVAGT Trigger: TGTTCCTGCCACCCGGTTGGATCGGCGATCCTTCCTTTCAGCTCAGTGACCTTCTGCGACCCCAGCAATGGTGACTGCCCCTGCAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS TCA 90 bp | GGCAGGAACACGCTTTGCAAGCGTCAGGGGCAGAGAAGGGTCTTCTaGGGTCGCGGTAGAAACCGGGCTTACAGCGTTGACAGTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRNTLCKRQGQRRVF*GRGRNRAYSVDSAD Trigger: GTCAGCACTGTCAACGCTGTAAGCCCGGTTTCTACCGCGACCTCAGAAGACCCTTCTCTGCCCCTGACGCTTGCAAAGCGTGTTCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 90 bp | CAGAAGGTCACTGAGCTGAAAGGAAGGATCGCCGATCCAACCGGGTaGCAGGAACACGCTTTGCAAGCGTCAGGGGCAGAGAAGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKVTELKGRIADPTG*QEHALQASGAEKGL Trigger: AAGACCCTTCTCTGCCCCTGACGCTTGCAAAGCGTGTTCCTGCCACCCGGTTGGATCGGCGATCCTTCCTTTCAGCTCAGTGACCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | CCGGAGCTTTCTTCCCAAAGCCAAGTTTCCCATGCGAGGGTTGCATaGTTTCTCACAGCGGGAGTTCGCTCCGGCTACTCCATTCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PELSSQSQVSHARVA*FLTAGVRSGYSIQA Trigger: GGCTTGAATGGAGTAGCCGGAGCGAACTCCCGCTGTGAGAAAGCATGCAACCCTCGCATGGGAAACTTGGCTTTGGGAAGAAAGCTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | CTGCCCGGAGCTTTCTTCCCAAAGCCAAGTTTCCCATGCGAGGGTTaGATGCTTTCTCACAGCGGGAGTTCGCTCCGGCTACTCCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGAFFPKPSFPCEG*MLSHSGSSLRLLHS Trigger: TGAATGGAGTAGCCGGAGCGAACTCCCGCTGTGAGAAAGCATGCAACCCTCGCATGGGAAACTTGGCTTTGGGAAGAAAGCTCCGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | ACATTGTGTCTGCCCGGAGCTTTCTTCCCAAAGCCAAGTTTCCCATaGGAGGGTTGCATGCTTTCTCACAGCGGGAGTTCGCTCCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TLCLPGAFFPKPSFP*EGCMLSHSGSSLRL Trigger: TAGCCGGAGCGAACTCCCGCTGTGAGAAAGCATGCAACCCTCGCATGGGAAACTTGGCTTTGGGAAGAAAGCTCCGGGCAGACACAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | GTAGAAGCAGAAGAGTTCGGTGGCGTTCTGGCCACACATTGTGTCTaGCCGGAGCTTTCTTCCCAAAGCCAAGTTTCCCATGCGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VEAEEFGGVLATHCV*PELSSQSQVSHARV Trigger: AACCCTCGCATGGGAAACTTGGCTTTGGGAAGAAAGCTCCGGGCAGACACAATGTGTGGCCAGAACGCCACCGAACTCTTCTGCTTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 90 bp | AGTGTCGGAGGGCAGAAAATCCTTGCTCATCCTCCCATTCCCAGCTaGGCTCACTCTTATTGTGCATCGAGTGAAAGGCGGGGACTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SVGGQKILAHPPIPS*AHSYCASSERRGLR Trigger: ACGAAGTCCCCGCCTTTCACTCGATGCACAATAAGAGTGAGCCCAGCTGGGAATGGGAGGATGAGCAAGGATTTTCTGCCCTCCGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS TCA 90 bp | GAGAATGGGCAGCGTTGCATTTATCACACTTGGGCTGCCGGCAAGTaGGGTCAGCATTCTCACTGTAGAAGCAGAAGAGTTCGGTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ENGQRCIYHTWAAGK*GQHSHCRSRRVRWR Trigger: ACGCCACCGAACTCTTCTGCTTCTACAGTGAGAATGCTGACCTCACTTGCCGGCAGCCCAAGTGTGATAAATGCAACGCTGCCCATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
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| CDS TCA 90 bp | TCATCCTCCCATTCCCAGCTGGGCTCACTCTTATTGTGCATCGAGTaGAAGGCGGGGACTTCGTGGTACCAGTCTACATCAGCGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSHSQLGSLLLCIE*KAGTSWYQSTSALL Trigger: CAGTAACGCTGATGTAGACTGGTACCACGAAGTCCCCGCCTTTCACTCGATGCACAATAAGAGTGAGCCCAGCTGGGAATGGGAGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | TGGATAAAGAAGACGGAAGACAATGGAAAGGAGCAAGCTGGTGAACTATCACATGGGCAGGACTGTCGCTaGAGCAGCCGCACTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WIKKTEDNGKEQAGELSHGQDCR*SSRTRR Trigger: CCTCCGAGTGCGGCTGCTCAAGCGACAGTCCTGCCC...ATGTGATAGTTCACCAGCTTGCTCCTTTCCATTGTCTTCCGTCTTCTTTATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS TCA 90 bp | CTCCTGCACTTTGGCACTGTAAGGGTTTTCTATGTCGTATGGTGGTaGCAGGGCTCTGAAAATAACCTCTCCTCCGGTGCACGGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLHFGTVRVFYVVWW*QGSENNLSSGARER Trigger: CCTTTCCCGTGCACCGGAGGAGAGGTTATTTTCAGAGCCCTGTCACCACCATACGACATAGAAAACCCTTACAGTGCCAAAGTGCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | GGTATCGGCTTGGGGTCCTCATTTCTCTTTATGAAACGTGACTGTTTTCAAACACAGGGGCAGTCACCATaGCTGGGGTCGCAGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GIGLGSSFLFMKRDCFQTQGQSP*LGSQKV Trigger: GACCTTCTGCGACCCCAGCAATGGTGACTGCCCCTG...TGTTTGAAAACAGTCACGTTTCATAAAGAGAAATGAGGACCCCAAGCCGATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCAGCCGCACTCGGAGGTaGGTGATCTTCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSHFIMASISQSNLSLSRTRR*VIFSCS Trigger: GGAGCAGCTGAAGATCACCAACCTCCGAGTGCGGCT...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | GTGGCCGTTGCAGAAGCAGCTGCCCTTGACGATGAAGTCATAGACTaGGTAGTGCATAAAATGGTGAGGTTTTGCGTTCAGGTCGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VAVAEAAALDDEVID*VVHKMVRFCVQVVY Trigger: ATAAACGACCTGAACGCAAAACCTCACCATTTTATGCACTACGCAGTCTATGACTTCATCGTCAAGGGCAGCTGCTTCTGCAACGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | TCCTTACATTCACATTTACCTGAGTGTCGGAGGGCAGAAAATCCTTaGTCATCCTCCCATTCCCAGCTGGGCTCACTCTTATTGTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SLHSHLPECRRAENP*SSSHSQLGSLLLCI Trigger: GATGCACAATAAGAGTGAGCCCAGCTGGGAATGGGAGGATGAGCAAGGATTTTCTGCCCTCCGACACTCAGGTAAATGTGAATGTAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | AGACGGAAGACAATGGAAAGGAGCAAGCTGGTGAACTATCACATAGTCTGCGTTTTGCATTTATCACACTaGGGCTGCCGGCAAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRKTMERSKLVNYHIVCVLHLSH*GCRQVR Trigger: CCTCACTTGCCGGCAGCCCAAGTGTGATAAATGCAA...AACGCAGACTATGTGATAGTTCACCAGCTTGCTCCTTTCCATTGTCTTCCGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | CTTGACAACATCATCTTCCAGGCCAAAAGTAGCCGAGCAGTTTGTTaGAAAGTACTTGTAAGGCTTCCAGGTCTTCCCAAAGTCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDNIIFQAKSSRAVC*KVLVRLPGLPKVLG Trigger: TCCCAGGACTTTGGGAAGACCTGGAAGCCTTACAAGTACTTTGCAACAAACTGCTCGGCTACTTTTGGCCTGGAAGATGATGTTGTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTTCCCAGGGCCGGTCATaGTACAATGGTGCACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSHFIMASISQSNLSLQTSQGRS*YNGAQC Trigger: GCACTGTGCACCATTGTACAATGACCGGCCCTGGGA...AGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | GGTATCGGCTTGGGGTCCTCATTTCTCTTTATGAAACGTGACTGTTTTCAAACATGGCTGCCTGCTGTGTaGTGCTTACACATACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GIGLGSSFLFMKRDCFQTWLPAV*CLHIHL Trigger: GAGGTGTATGTGTAAGCACAACACAGCAGGCAGCCA...TGTTTGAAAACAGTCACGTTTCATAAAGAGAAATGAGGACCCCAAGCCGATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 90 bp | AAGCTTTTCATATTCACAATTAATTTGCCTGTTCTTACGTCCTCGTaGCCAGCGACCAGGTACTCCAATCCTGGATTGAGGATTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: KLFIFTINLPVLTSS*PATRYSNPGLRIGQ Trigger: CTGTCCAATCCTCAATCCAGGATTGGAGTACCTGGTCGCTGGCCACGAGGACGTAAGAACAGGCAAATTAATTGTGAATATGAAAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | CATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTGAGACTGAGGGCAGAAAATCCTaGCTCATCCTCCCATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HFIMASISQSNLSLQTETEGRKS*LILPFP Trigger: TGGGAATGGGAGGATGAGCAAGGATTTTCTGCCCTC...AGTCTCAGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | GTTAGGAAACTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAATTTCCCATGCGAGGGTaGCATGCTTTCTCACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VRKLVHVLLIQEGRKLVQFPMRG*HAFSQR Trigger: CCGCTGTGAGAAAGCATGCAACCCTCGCATGGGAAA...TTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAGTTTCCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAATAGCTCCCTTCTaGACAACATCATCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSHFIMASISQSNLSLQIAPF*TTSSSR Trigger: CCTGGAAGATGATGTTGTCAAGAAGGGAGCTATTTG...GAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAGAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS-3UTR CAA 90 bp | CTCTCTCATTTCATTATGGCCAGTATCTCACAATCTAACCTCTCACTCCAAACTATTCCACAGAAGGCTTaGGGGTTTCCTAACACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSHFIMASISQSNLSLQTIPQKA*GFPNTC Trigger: ACAGGTGTTAGGAAACCCCAAAGCCTTCTGTGGAAT...AGTTTGGAGTGAGAGGTTAGATTGTGAGATACTGGCCATAATGAAATGAGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 90 bp | TTTAAGATGTGCATGACTCTTCTGCCAAGAGCTGGTTTCCAGTGCTaGACAAAGCTTTTCATATTCACAATTAATTTGCCTGTTCTTACG | + |
|
Preference number: 5 (lower is better) Translates to: FKMCMTLLPRAGFQC*TKLFIFTINLPVLT Trigger: CGTAAGAACAGGCAAATTAATTGTGAATATGAAAAGCTTTGTCCAGCACTGGAAACCAGCTCTTGGCAGAAGAGTCATGCACATCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 90 bp | CTTTTTAAGATGTGCATGACTCTTCTGCCAAGAGCTGGTTTCCAGTaGTGGACAAAGCTTTTCATATTCACAATTAATTTGCCTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFKMCMTLLPRAGFQ*WTKLFIFTINLPVL Trigger: AAGAACAGGCAAATTAATTGTGAATATGAAAAGCTTTGTCCAGCACTGGAAACCAGCTCTTGGCAGAAGAGTCATGCACATCTTAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS-3UTR CAA 90 bp | GTTAGGAAACTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAACGTAAGATCTTCAGTTaGGTGGACTTTAAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRKLVHVLLIQEGRKLVQRKIFS*VDFKTF Trigger: GAAAGTCTTAAAGTCCACCAAACTGAAGATCTTACG...TTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAGTTTCCTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTACATGTACTGTTAATACAAGAAGGAAGAAAACTGGTCCAATATTCATGTATATTCACAATTAATTaGCCTGTTCTTACGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LVHVLLIQEGRKLVQYSCIFTIN*PVLTSS Trigger: CGAGGACGTAAGAACAGGCAAATTAATTGTGAATAT...ACATGAATATTGGACCAGTTTTCTTCCTTCTTGTATTAACAGTACATGTACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS CAA 72 bp | CACCTCCCGTGGACCACGTGGAACGCTCCCGGGGCCTaGATGGGTCTGAAGCCCTCCACAGGTAAGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLPWTTWNAPGA*MGLKPSTGKHW Trigger: CCAGTGCTTACCTGTGGAGGGCTTCAGACCCATCAAGGCCCCGGGAGCGTTCCACGTGGTCCACGGGAGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS CAA 90 bp | TTAGGAGCCCCTGTTCTGCCGTCCGCTGCCTCCCAGGGCCGGTCATaGTACAATGGTGCACAGTGCTGGCAGTGGCTGCCTGCTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGAPVLPSAASQGRS*YNGAQCWQWLPAVL Trigger: CAACACAGCAGGCAGCCACTGCCAGCACTGTGCACCATTGTACAATGACCGGCCCTGGGAGGCAGCGGACGGCAGAACAGGGGCTCCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS CAA 90 bp | TTACACATACACCTCCCGTGGACCACGTGGAACGCTCCCGGGGCCTaGATGGGTCTGAAGCCCTCCACAGGTAAGCACTGGTCAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LHIHLPWTTWNAPGA*MGLKPSTGKHWSAW Trigger: CCACGCTGACCAGTGCTTACCTGTGGAGGGCTTCAGACCCATCAAGGCCCCGGGAGCGTTCCACGTGGTCCACGGGAGGTGTATGTGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS TCA 72 bp | CGGTTCCCCGACGCCTCCCACACGTTGACGTCGAAGTaGCAGGTGTCCGCGTGCCCATTGCACTTGCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RFPDASHTLTSK*QVSACPLHLQV Trigger: AACTTGCAAGTGCAATGGGCACGCGGACACCTGTCACTTCGACGTCAACGTGTGGGAGGCGTCGGGGAACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
||
| CDS TCA 72 bp | GGGGCAGTCACCATTGCTGGGGTCGCAGAAGGTCACTaGGCTGAAAGGAAGGATCGCCGATCCAACCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GAVTIAGVAEGH*AERKDRRSNRV Trigger: CACCCGGTTGGATCGGCGATCCTTCCTTTCAGCTCAGTGACCTTCTGCGACCCCAGCAATGGTGACTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 72 bp | CTGCCTGCTGTGTTGTGCTTACACATACACCTCCCGTaGACCACGTGGAACGCTCCCGGGGCCTTGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: LPAVLCLHIHLP*TTWNAPGALMG Trigger: ACCCATCAAGGCCCCGGGAGCGTTCCACGTGGTCCACGGGAGGTGTATGTGTAAGCACAACACAGCAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | GGGCAGGACTGTCGCTTGAGCAGCCGCACTCGGAGGTaGGTGATCTTCAGCTGCTCCTGCACTTTGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: GQDCRLSSRTRR*VIFSCSCTLAL Trigger: CAGTGCCAAAGTGCAGGAGCAGCTGAAGATCACCAACCTCCGAGTGCGGCTGCTCAAGCGACAGTCCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | AGGATCGCCGATCCAACCGGGTGGCAGGAACACGCTTaGCAAGCGTCAGGGGCAGAGAAGGGTCTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RIADPTGWQEHA*QASGAEKGLLR Trigger: CCTCAGAAGACCCTTCTCTGCCCCTGACGCTTGCAAAGCGTGTTCCTGCCACCCGGTTGGATCGGCGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS TCA 72 bp | CATCCTCTGCAGACTGCCACCATGTCCGGGGAAACCTaGAGGATGAGTCTGCCATGGCAGAGGGTGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: HPLQTATMSGET*RMSLPWQRVGE Trigger: CTCACCCACCCTCTGCCATGGCAGACTCATCCTTCAGGTTTCCCCGGACATGGTGGCAGTCTGCAGAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
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| CDS TCA 72 bp | AGTCACCATTGCTGGGGTCGCAGAAGGTCACTGAGCTaGAAGGAAGGATCGCCGATCCAACCGGGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SHHCWGRRRSLS*KEGSPIQPGGR Trigger: CCTGCCACCCGGTTGGATCGGCGATCCTTCCTTTCAGCTCAGTGACCTTCTGCGACCCCAGCAATGGTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 72 bp | GGTCTGAAGCCCTCCACAGGTAAGCACTGGTCAGCGTaGCCGTTGCAGAAGCAGCTGCCCTTGACGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: GLKPSTGKHWSA*PLQKQLPLTMK Trigger: CTTCATCGTCAAGGGCAGCTGCTTCTGCAACGGCCACGCTGACCAGTGCTTACCTGTGGAGGGCTTCAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 72 bp | ACTGAGCTGAAAGGAAGGATCGCCGATCCAACCGGGTaGCAGGAACACGCTTTGCAAGCGTCAGGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TELKGRIADPTG*QEHALQASGAE Trigger: CTCTGCCCCTGACGCTTGCAAAGCGTGTTCCTGCCACCCGGTTGGATCGGCGATCCTTCCTTTCAGCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS TCA 72 bp | ACGCTTTGCAAGCGTCAGGGGCAGAGAAGGGTCTTCTaGGGTCGCGGTAGAAACCGGGCTTACAGCGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: TLCKRQGQRRVF*GRGRNRAYSVD Trigger: GTCAACGCTGTAAGCCCGGTTTCTACCGCGACCTCAGAAGACCCTTCTCTGCCCCTGACGCTTGCAAAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | TCTGCCCGGAGCTTTCTTCCCAAAGCCAAGTTTCCCATGCGAGGGTaGCATGCTTTCTCACAGCGGGAGTTCGCTCCGGCTACTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: SARSFLPKAKFPMRG*HAFSQREFAPATPF Trigger: GAATGGAGTAGCCGGAGCGAACTCCCGCTGTGAGAAAGCATGCAACCCTCGCATGGGAAACTTGGCTTTGGGAAGAAAGCTCCGGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | TCATTGTACAATGGTGCACAGTGCTGGCAGTGGCTGCCTGCTGTGTaGTGCTTACACATACACCTCCCGTGGACCACGTGGAACGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLYNGAQCWQWLPAV*CLHIHLPWTTWNAP Trigger: GGGAGCGTTCCACGTGGTCCACGGGAGGTGTATGTGTAAGCACAACACAGCAGGCAGCCACTGCCAGCACTGTGCACCATTGTACAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | GTTCTTACGTCCTCGTGGCCAGCGACCAGGTACTCCAATCCTGGATaGAGGATTGGACAGGTGCAGCCTCTGTTAGTCCAGGACTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VLTSSWPATRYSNPG*RIGQVQPLLVQDSG Trigger: CCCAGAGTCCTGGACTAACAGAGGCTGCACCTGTCCAATCCTCAATCCAGGATTGGAGTACCTGGTCGCTGGCCACGAGGACGTAAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 72 bp | TCTTCCCAAAGCCAAGTTTCCCATGCGAGGGTTGCATaGTTTCTCACAGCGGGAGTTCGCTCCGGCTACTCC | + |
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Preference number: 6 (lower is better) Translates to: SSQSQVSHARVA*FLTAGVRSGYS Trigger: GGAGTAGCCGGAGCGAACTCCCGCTGTGAGAAAGCATGCAACCCTCGCATGGGAAACTTGGCTTTGGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 72 bp | GCCAGCGACCAGGTACTCCAATCCTGGATTGAGGATTaGACAGGTGCAGCCTCTGTTAGTCCAGGACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASDQVLQSWIED*TGAASVSPGLW Trigger: CCAGAGTCCTGGACTAACAGAGGCTGCACCTGTCCAATCCTCAATCCAGGATTGGAGTACCTGGTCGCTGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | TCCTCGTGGCCAGCGACCAGGTACTCCAATCCTGGATaGAGGATTGGACAGGTGCAGCCTCTGTTAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSWPATRYSNPG*RIGQVQPLLVQ Trigger: CTGGACTAACAGAGGCTGCACCTGTCCAATCCTCAATCCAGGATTGGAGTACCTGGTCGCTGGCCACGAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 72 bp | GCTTTCTTCCCAAAGCCAAGTTTCCCATGCGAGGGTTaGATGCTTTCTCACAGCGGGAGTTCGCTCCGGCTA | + |
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Preference number: 6 (lower is better) Translates to: AFFPKPSFPCEG*MLSHSGSSLRL Trigger: TAGCCGGAGCGAACTCCCGCTGTGAGAAAGCATGCAACCCTCGCATGGGAAACTTGGCTTTGGGAAGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 72 bp | GAAGAGTTCGGTGGCGTTCTGGCCACACATTGTGTCTaGCCGGAGCTTTCTTCCCAAAGCCAAGTTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: EEFGGVLATHCV*PELSSQSQVSH Trigger: ATGGGAAACTTGGCTTTGGGAAGAAAGCTCCGGGCAGACACAATGTGTGGCCAGAACGCCACCGAACTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
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| CDS CCA 72 bp | GGGCAGAAAATCCTTGCTCATCCTCCCATTCCCAGCTaGGCTCACTCTTATTGTGCATCGAGTGAAAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GQKILAHPPIPS*AHSYCASSERR Trigger: CCGCCTTTCACTCGATGCACAATAAGAGTGAGCCCAGCTGGGAATGGGAGGATGAGCAAGGATTTTCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | AGAAGCAGAAGAGTTCGGTGGCGTTCTGGCCACACATaGTGTCTGCCCGGAGCTTTCTTCCCAAAGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: RSRRVRWRSGHT*CLPGAFFPKPS Trigger: ACTTGGCTTTGGGAAGAAAGCTCCGGGCAGACACAATGTGTGGCCAGAACGCCACCGAACTCTTCTGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
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| CDS CAA 90 bp | TCTCACTGTAGAAGCAGAAGAGTTCGGTGGCGTTCTGGCCACACATaGTGTCTGCCCGGAGCTTTCTTCCCAAAGCCAAGTTTCCCATGC | + |
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Preference number: 6 (lower is better) Translates to: SHCRSRRVRWRSGHT*CLPGAFFPKPSFPC Trigger: GCATGGGAAACTTGGCTTTGGGAAGAAAGCTCCGGGCAGACACAATGTGTGGCCAGAACGCCACCGAACTCTTCTGCTTCTACAGTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS TCA 72 bp | CATTCCCAGCTGGGCTCACTCTTATTGTGCATCGAGTaGAAGGCGGGGACTTCGTGGTACCAGTCTACATCA | + |
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Preference number: 6 (lower is better) Translates to: HSQLGSLLLCIE*KAGTSWYQSTS Trigger: TGATGTAGACTGGTACCACGAAGTCCCCGCCTTTCACTCGATGCACAATAAGAGTGAGCCCAGCTGGGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 72 bp | TCACATTTACCTGAGTGTCGGAGGGCAGAAAATCCTTaGTCATCCTCCCATTCCCAGCTGGGCTCACTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SHLPECRRAENP*SSSHSQLGSLL Trigger: TAAGAGTGAGCCCAGCTGGGAATGGGAGGATGAGCAAGGATTTTCTGCCCTCCGACACTCAGGTAAATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS TCA 72 bp | CAGCGTTGCATTTATCACACTTGGGCTGCCGGCAAGTaGGGTCAGCATTCTCACTGTAGAAGCAGAAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: QRCIYHTWAAGK*GQHSHCRSRRV Trigger: AACTCTTCTGCTTCTACAGTGAGAATGCTGACCTCACTTGCCGGCAGCCCAAGTGTGATAAATGCAACGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
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| CDS GCA 72 bp | GCAGAAGCAGCTGCCCTTGACGATGAAGTCATAGACTaGGTAGTGCATAAAATGGTGAGGTTTTGCGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AEAAALDDEVID*VVHKMVRFCVQ Trigger: CTGAACGCAAAACCTCACCATTTTATGCACTACGCAGTCTATGACTTCATCGTCAAGGGCAGCTGCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | CAGGTGCAGCCTCTGTTAGTCCAGGACTCTGGGTATAGCGTTCTCTaGCCTCGTAAGATCTTCAGTTTGGTGGACTTTAAGACTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: QVQPLLVQDSGYSVL*PRKIFSLVDFKTFL Trigger: TAAGAAAGTCTTAAAGTCCACCAAACTGAAGATCTTACGAGGCAAGAGAACGCTATACCCAGAGTCCTGGACTAACAGAGGCTGCACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | GCTGGTTTCCAGTGCTGGACAAAGCTTTTCATATTCACAATTAATTaGCCTGTTCTTACGTCCTCGTGGCCAGCGACCAGGTACTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: AGFQCWTKLFIFTIN*PVLTSSWPATRYSN Trigger: ATTGGAGTACCTGGTCGCTGGCCACGAGGACGTAAGAACAGGCAAATTAATTGTGAATATGAAAAGCTTTGTCCAGCACTGGAAACCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS TCA 72 bp | GAAAATAACCTCTCCTCCGGTGCACGGGAAAGGATTTaGGTATCTAGACGTGCAAATAGCTCCCTTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: ENNLSSGARERI*VSRRANSSLLD Trigger: GTCAAGAAGGGAGCTATTTGCACGTCTAGATACTCAAATCCTTTCCCGTGCACCGGAGGAGAGGTTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 72 bp | GTCATAGACTGCGTAGTGCATAAAATGGTGAGGTTTTaGGTTCAGGTCGTTTATCTGACAAGGGCAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: VIDCVVHKMVRF*VQVVYLTRAGL Trigger: CAGTCCTGCCCTTGTCAGATAAACGACCTGAACGCAAAACCTCACCATTTTATGCACTACGCAGTCTATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 72 bp | ATATTCACAATTAATTTGCCTGTTCTTACGTCCTCGTaGCCAGCGACCAGGTACTCCAATCCTGGATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: IFTINLPVLTSS*PATRYSNPGLR Trigger: CCTCAATCCAGGATTGGAGTACCTGGTCGCTGGCCACGAGGACGTAAGAACAGGCAAATTAATTGTGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | CCTCTGTTAGTCCAGGACTCTGGGTATAGCGTTCTCTaGCCTCGTAAGATCTTCAGTTTGGTGGACTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: PLLVQDSGYSVL*PRKIFSLVDFK Trigger: CTTAAAGTCCACCAAACTGAAGATCTTACGAGGCAAGAGAACGCTATACCCAGAGTCCTGGACTAACAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | CAGTGCTGGACAAAGCTTTTCATATTCACAATTAATTaGCCTGTTCTTACGTCCTCGTGGCCAGCGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: QCWTKLFIFTIN*PVLTSSWPATR Trigger: CCTGGTCGCTGGCCACGAGGACGTAAGAACAGGCAAATTAATTGTGAATATGAAAAGCTTTGTCCAGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | CACGGGAAAGGATTTGAGTATCTAGACGTGCAAATAGCTCCCTTCTaGACAACATCATCTTCCAGGCCAAAAGTAGCCGAGCAGTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: HGKGFEYLDVQIAPF*TTSSSRPKVAEQFV Trigger: AACAAACTGCTCGGCTACTTTTGGCCTGGAAGATGATGTTGTCAAGAAGGGAGCTATTTGCACGTCTAGATACTCAAATCCTTTCCCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS GCA 72 bp | ATCATCTTCCAGGCCAAAAGTAGCCGAGCAGTTTGTTaGAAAGTACTTGTAAGGCTTCCAGGTCTTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: IIFQAKSSRAVC*KVLVRLPGLPK Trigger: TTTGGGAAGACCTGGAAGCCTTACAAGTACTTTGCAACAAACTGCTCGGCTACTTTTGGCCTGGAAGATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020204.5 ENSMUST00000147080.2 |
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| CDS TCA 72 bp | CGGCATGGGAGCCTTTGTCGTGGGCTGATAAGATCTTaGTTTTTAACACATATGAATACTTCATTCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: RHGSLCRGLIRS*FLTHMNTSFHR Trigger: TCTGTGGAATGAAGTATTCATATGTGTTAAAAATCAAGATCTTATCAGCCCACGACAAAGGCTCCCATGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | ACATTGACTTCGGCATGGGAGCCTTTGTCGTGGGCTGATAAGATCTaGATTTTTAACACATATGAATACTTCATTCCACAGAAGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TLTSAWEPLSWADKI*IFNTYEYFIPQKAL Trigger: CAAAGCCTTCTGTGGAATGAAGTATTCATATGTGTTAAAAATCAAGATCTTATCAGCCCACGACAAAGGCTCCCATGCCGAAGTCAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CCA 72 bp | ATCTTCACATTGACTTCGGCATGGGAGCCTTTGTCGTaGGCTGATAAGATCTTGATTTTTAACACATATGAA | + |
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Preference number: 6 (lower is better) Translates to: IFTLTSAWEPLS*ADKILIFNTYE Trigger: TTCATATGTGTTAAAAATCAAGATCTTATCAGCCCACGACAAAGGCTCCCATGCCGAAGTCAATGTGAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | TTCTTAATCTTCACATTGACTTCGGCATGGGAGCCTTaGTCGTGGGCTGATAAGATCTTGATTTTTAACACA | + |
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Preference number: 6 (lower is better) Translates to: FLIFTLTSAWEP*SWADKILIFNT Trigger: TGTGTTAAAAATCAAGATCTTATCAGCCCACGACAAAGGCTCCCATGCCGAAGTCAATGTGAAGATTAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 72 bp | TTTAACACATATGAATACTTCATTCCACAGAAGGCTTaGGGGTTTCCTAACACCTGTTCCTTACATTCACAT | + |
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Preference number: 6 (lower is better) Translates to: FNTYEYFIPQKA*GFPNTCSLHSH Trigger: ATGTGAATGTAAGGAACAGGTGTTAGGAAACCCCAAAGCCTTCTGTGGAATGAAGTATTCATATGTGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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| CDS CAA 90 bp | ATCTTGATTTTTAACACATATGAATACTTCATTCCACAGAAGGCTTaGGGGTTTCCTAACACCTGTTCCTTACATTCACATTTACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ILIFNTYEYFIPQKA*GFPNTCSLHSHLPE Trigger: CTCAGGTAAATGTGAATGTAAGGAACAGGTGTTAGGAAACCCCAAAGCCTTCTGTGGAATGAAGTATTCATATGTGTTAAAAATCAAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020204.5 |
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