Pregenerated sensors for NTMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026857Ensembl transcript IDs: ENSMUST00000041830.10, ENSMUST00000127566.3, ENSMUST00000128303.7, ENSMUST00000129712.3, ENSMUST00000138889.8, ENSMUST00000143970.3, ENSMUST00000152374.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCGCAGGCCCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTaGTCCGTCAGGTGGCCTGGGGAGAAGCGAGGCGTGAGCGTGCCG | + |
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Preference number: 1 (lower is better) Translates to: GRRPRLQRRRNSARC*SVRWPGEKRGVSVP Trigger: CGGCACGCTCACGCCTCGCTTCTCCCCAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGGGCCTGCGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR GCA 90 bp | ATCTGGCAGGTTCTCCTGGCGCTCCTCGGCCAGGAGGCTGAGGCCTaGAGTGCGGATGATCCGGCGGACCACCTCAAGGTCCCGGCACAC | + |
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Preference number: 1 (lower is better) Translates to: IWQVLLALLGQEAEA*SADDPADHLKVPAH Trigger: GTGTGCCGGGACCTTGAGGTGGTCCGCCGGATCATCCGCACTGCAGGCCTCAGCCTCCTGGCCGAGGAGCGCCAGGAGAACCTGCCAGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR CCA 90 bp | CAGGGCACACCTCCCCTAGGGCTTGACCCTTCCCACTGGAGTCAATaGTGTGTCTCTTGGCCTGCCAGCTGCTGGCCCCCAGCTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: QGTPPLGLDPSHWSQ*CVSWPASCWPPALA Trigger: GGCCAGAGCTGGGGGCCAGCAGCTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAAGGGTCAAGCCCTAGGGGAGGTGTGCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR CCA 90 bp | GCAGCGGCGCAGAAACTCAGCCAGGTGCTGATCCGTCAGGTGGCCTaGGGAGAAGCGAGGCGTGAGCGTGCCGTATGTGTGCCCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: AAAQKLSQVLIRQVA*GEARRERAVCVPSA Trigger: TGCTGAGGGCACACATACGGCACGCTCACGCCTCGCTTCTCCCCAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR TCA 90 bp | GGGCGCAGGCCCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTaGTCCGTCAGGTGGCCTATCACCCACTGGATCCAGATCACGTCA | + |
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Preference number: 1 (lower is better) Translates to: GRRPRLQRRRNSARC*SVRWPITHWIQITS Trigger: TGACGTGATCTGGATCCAGTGGGTGATAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGGGCCTGCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 |
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| 3UTR TCA 90 bp | ACAGGGCTGCAGTGCCCCAATCCAGGGCACACCTCCCCTAGGGCTTaGCCCTTCCCACTGGAGTCAATGGTGTGTCTCTTGGCCTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TGLQCPNPGHTSPRA*PFPLESMVCLLACQ Trigger: CTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAAGGGTCAAGCCCTAGGGGAGGTGTGCCCTGGATTGGGGCACTGCAGCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR GCA 90 bp | GACCCTTCCCACTGGAGTCAATGGTGTGTCTCTTGGCCTGCCAGCTaGTGGCCCCCAGCTCTGGCCCTGGCTTCATCTCAGGGCAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: DPSHWSQWCVSWPAS*WPPALALASSQGKA Trigger: AGCTTTGCCCTGAGATGAAGCCAGGGCCAGAGCTGGGGGCCAGCAGCTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAAGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR GCA 90 bp | GTCAGGTGGCCTGGGGAGAAGCGAGGCGTGAGCGTGCCGTATGTGTaGCCTCAGCACAGGCCAGCAAGCGTCTCTCTCGATCTTAAGACC | + |
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Preference number: 1 (lower is better) Translates to: VRWPGEKRGVSVPYV*PQHRPASVSLDLKT Trigger: GGTCTTAAGATCGAGAGAGACGCTTGCTGGCCTGTGCTGAGGGCACACATACGGCACGCTCACGCCTCGCTTCTCCCCAGGCCACCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR CCA 90 bp | CTGGCTTCATCTCAGGGCAAAGCTGTAGACATGGTAGATCTCATCTaGCAGGTTCTCCTGGCGCTCCTCGGCCAGGAGGCTGAGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LASSQGKAVDMVDLI*QVLLALLGQEAEAC Trigger: GCAGGCCTCAGCCTCCTGGCCGAGGAGCGCCAGGAGAACCTGCCAGATGAGATCTACCATGTCTACAGCTTTGCCCTGAGATGAAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR TCA 90 bp | TCACCCACTGGATCCAGATCACGTCATAGGAGCCAGGCTCAGGGCTaGAGTCCTGCAGCCCACAGCAGAAGTAGTTCCTCACCCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: SPTGSRSRHRSQAQG*SPAAHSRSSSSPSC Trigger: GCAAGAGGGTGAGGAACTACTTCTGCTGTGGGCTGCAGGACTTCAGCCCTGAGCCTGGCTCCTATGACGTGATCTGGATCCAGTGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 |
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| 3UTR GCA 90 bp | CCTTTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTaGTGTGACCCATCACCAAAGAGGATATGGGGCTGTGACCATTTC | + |
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Preference number: 1 (lower is better) Translates to: PFIGCVREELLGAAG*CDPSPKRIWGCDHF Trigger: GAAATGGTCACAGCCCCATATCCTCTTTGGTGATGGGTCACAGCAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGAGGCCTGCAGTGCGGATGATCCGGCGGACCACCTCAAGGTCCCGGCACTCTTGGCCTGCCAGCTaGTGGCCCCCAGCTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RLRPAVRMIRRTTSRSRHSWPAS*WPPALA Trigger: GGCCAGAGCTGGGGGCCAGCAGCTGGCAGGCCAAGA...GTGCCGGGACCTTGAGGTGGTCCGCCGGATCATCCGCACTGCAGGCCTCAGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGCCTGCAGTGCGGATGATCCGGCGGACCACCTCAAGGTCCCGGCACACAACCTCCCCTAGGGCTTaGCCCTTCCCACTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LRPAVRMIRRTTSRSRHTTSPRA*PFPLES Trigger: TGACTCCAGTGGGAAGGGTCAAGCCCTAGGGGAGGT...TGTGTGCCGGGACCTTGAGGTGGTCCGCCGGATCATCCGCACTGCAGGCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTGATCCGTCAGGTGGCCTGAGCGTGCCGTATGTGTaGCCTCAGCACAGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PACSGAETQPGADPSGGLSVPYV*PQHRPA Trigger: TGCTGGCCTGTGCTGAGGGCACACATACGGCACGCT...CAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR-3UTR TCA 90 bp | GCGGACCACCTCAAGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCACAACTCAGCCAGGTGCTaGTCCGTCAGGTGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ADHLKVPAHTAVHIVQDHNSARC*SVRWPG Trigger: CCCAGGCCACCTGACGGATCAGCACCTGGCTGAGTT...GTGATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCTTGAGGTGGTCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGCACACCTCCCCTCAGGGTGCTTTAGAGTaGCAGGGCTGCAGTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GCFRVTGLQCPNPGHTSPQGALE*QGCSAP Trigger: TGGGGCACTGCAGCCCTGTCACTCTAAAGCACCCTG...AGGGGAGGTGTGCCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCAGATCACGTCATAGGAGCCAGGCTCAGGGCTGAAGTCCTGCAGCCCACAGTGTGTCTCTTGGCCTaGCAGCTGCTGGCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: DPDHVIGARLRAEVLQPTVCLLA*QLLAPS Trigger: GCTGGGGGCCAGCAGCTGGCAGGCCAAGAGACACAC...TGTGGGCTGCAGGACTTCAGCCCTGAGCCTGGCTCCTATGACGTGATCTGGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGACCACCTCAAGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCACCAATGGTGTGTCTCTTaGCCTGCCAGCTGCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: ADHLKVPAHTAVHIVQDHQWCVS*PASCWP Trigger: GGGCCAGCAGCTGGCAGGCCAAGAGACACACCATTG...GTGATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCTTGAGGTGGTCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCGGACCACCTCAAGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCTCCCACTGGAGTCAATaGTGTGTCTCTTGGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RRTTSRSRHTLLSTSSRISHWSQ*CVSWPA Trigger: GGCAGGCCAAGAGACACACCATTGACTCCAGTGGGA...GATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCTTGAGGTGGTCCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGGCGCAGGCCCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTGATCCCCCCAGGTAGGTCTTaGCTTTGGCCAGAAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: IGAQAPLAAAQKLSQVLIPPGRS*LWPESL Trigger: AAGACTTTCTGGCCAAAGCCAAGACCTACCTGGGGG...GATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGGGCCTGCGCCCCAAT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTGCAGTGCCCCAATCCAGGGCACACCTCCCCTAGGGCTTGACCCTTCCAGGATCACACCCTCCTaGGCCATGTTGTCCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: QGCSAPIQGTPPLGLDPSRITPS*AMLSLM Trigger: CATCAAGGACAACATGGCCCAGGAGGGTGTGATCCT...GGAAGGGTCAAGCCCTAGGGGAGGTGTGCCCTGGATTGGGGCACTGCAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTCCTGGAACACAGCAGTCCACACATTGAGGTCCCTAGGCAACCAAGTGGTGTGTCTCTTGGCCTaGCAGCTGCTGGCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: WLSWNTAVHTLRSLGNQVVCLLA*QLLAPS Trigger: GCTGGGGGCCAGCAGCTGGCAGGCCAAGAGACACAC...CACTTGGTTGCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTGCTGTCCACATCGTCCAGGATCACACCCTCCTGGGCCATGTTGTCCTTGGTGACAGGGCTGCAGTaGCCCAATCCAGGGCACACC | + |
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Preference number: 2 (lower is better) Translates to: TLLSTSSRITPSWAMLSLVTGLQ*PNPGHT Trigger: GGTGTGCCCTGGATTGGGGCACTGCAGCCCTGTCAC...CAAGGACAACATGGCCCAGGAGGGTGTGATCCTGGACGATGTGGACAGCAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTGCTGTGACCCAGTGACAGGGCTGCAGTaGCCCAATCCAGGGCACACC | + |
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Preference number: 2 (lower is better) Translates to: FIGCVREELLGAAGCCDPVTGLQ*PNPGHT Trigger: GGTGTGCCCTGGATTGGGGCACTGCAGCCCTGTCAC...TGGGTCACAGCAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCACCCTTTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTGACCTCCCCTAGGGCTTaGCCCTTCCCACTGGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: DSPFYWLCQRGAPRSCRLTSPRA*PFPLES Trigger: TGACTCCAGTGGGAAGGGTCAAGCCCTAGGGGAGGT...CAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAAAGGGTGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGCCTGGCTGTCCTGGAACACAGCAGTCCACACATTGAGGTCCCTAGGCTCCCACTGGAGTCAATaGTGTGTCTCTTGGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: CVAWLSWNTAVHTLRSLGSHWSQ*CVSWPA Trigger: GGCAGGCCAAGAGACACACCATTGACTCCAGTGGGA...GCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR CAA 90 bp | GTACCATGTGTGGCCTGGCTGTCCTGGAACACAGCAGTCCACACATaGAGGTCCCTAGGCAACCAAGTGAAGTCTTTCCCCTCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPCVAWLSWNTAVHT*RSLGNQVKSFPSGS Trigger: GCTGCCTGAGGGGAAAGACTTCACTTGGTTGCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACACATGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCAGGGCAAAGCTGTAGACATGGTAGATCTCATCTGGCAGGTTCTCCTGGCCAGGGTGCTTTAGAGTaGCAGGGCTGCAGTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: ISGQSCRHGRSHLAGSPGQGALE*QGCSAP Trigger: TGGGGCACTGCAGCCCTGTCACTCTAAAGCACCCTG...GCCAGGAGAACCTGCCAGATGAGATCTACCATGTCTACAGCTTTGCCCTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTGCTGTGACCCAAGCTGCAGGCTGCTGTaGCCCATCACCAAAGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: FIGCVREELLGAAGCCDPSCRLL*PITKED Trigger: ATCCTCTTTGGTGATGGGTCACAGCAGCCTGCAGCT...TGGGTCACAGCAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR GCA 90 bp | GACTCACCCTTTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTGGGGAAGTTGCCAGGGTaGTTTAGAGTGACAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: DSPFYWLCQRGAPRSCRLGKLPG*FRVTGL Trigger: CAGCCCTGTCACTCTAAAGCACCCTGGCAACTTCCC...CAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAAAGGGTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCACCCTTTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTGGTACCATGTGTGGCCTaGCTGTCCTGGAACACAGCA | + |
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Preference number: 2 (lower is better) Translates to: DSPFYWLCQRGAPRSCRLVPCVA*LSWNTA Trigger: TGCTGTGTTCCAGGACAGCCAGGCCACACATGGTAC...CAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAAAGGGTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR TCA 72 bp | CCCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTaGTCCGTCAGGTGGCCTGGGGAGAAGCGAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: PRLQRRRNSARC*SVRWPGEKRGV Trigger: CACGCCTCGCTTCTCCCCAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR GCA 72 bp | GTTCTCCTGGCGCTCCTCGGCCAGGAGGCTGAGGCCTaGAGTGCGGATGATCCGGCGGACCACCTCAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: VLLALLGQEAEA*SADDPADHLKV Trigger: GACCTTGAGGTGGTCCGCCGGATCATCCGCACTGCAGGCCTCAGCCTCCTGGCCGAGGAGCGCCAGGAGAAC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR CAA 90 bp | CTCGGCCAGGAGGCTGAGGCCTGCAGTGCGGATGATCCGGCGGACCACCTCAAGATGACGATGATGCCATaGGGGCGCAGGCCCCGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LGQEAEACSADDPADHLKMTMMP*GRRPRL Trigger: CAAGCGGGGCCTGCGCCCCAATGGCATCATCGTCAT...CTTGAGGTGGTCCGCCGGATCATCCGCACTGCAGGCCTCAGCCTCCTGGCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138889.8 ENSMUST00000143970.3 |
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| 3UTR TCA 72 bp | CCCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTaGTCCGTCAGGTGGCCTATCACCCACTGGATCCAG | + |
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Preference number: 3 (lower is better) Translates to: PRLQRRRNSARC*SVRWPITHWIQ Trigger: CTGGATCCAGTGGGTGATAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 |
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| 3UTR GCA 72 bp | CCTGGGGAGAAGCGAGGCGTGAGCGTGCCGTATGTGTaGCCTCAGCACAGGCCAGCAAGCGTCTCTCTCGAT | + |
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Preference number: 3 (lower is better) Translates to: PGEKRGVSVPYV*PQHRPASVSLD Trigger: ATCGAGAGAGACGCTTGCTGGCCTGTGCTGAGGGCACACATACGGCACGCTCACGCCTCGCTTCTCCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR CCA 72 bp | CAGGGCACACCTCCCCTAGGGCTTGACCCTTCCCACTaGAGTCAATGGTGTGTCTCTTGGCCTGCCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: QGTPPLGLDPSH*SQWCVSWPASC Trigger: GCAGCTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAAGGGTCAAGCCCTAGGGGAGGTGTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR CCA 72 bp | CAGAAACTCAGCCAGGTGCTGATCCGTCAGGTGGCCTaGGGAGAAGCGAGGCGTGAGCGTGCCGTATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: QKLSQVLIRQVA*GEARRERAVCV Trigger: CACACATACGGCACGCTCACGCCTCGCTTCTCCCCAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
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| 3UTR-3UTR CAA 90 bp | GAGCTCCTAGGAGCTGCAGGCTGCTGTGACCCATCACCAAAGAGGATATGGGGCTCAATGGTGTGTCTCTaGGCCTGCCAGCTGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: ELLGAAGCCDPSPKRIWGSMVCL*ACQLLA Trigger: GGCCAGCAGCTGGCAGGCCAAGAGACACACCATTGA...GCCCCATATCCTCTTTGGTGATGGGTCACAGCAGCCTGCAGCTCCTAGGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR TCA 72 bp | CAGTGCCCCAATCCAGGGCACACCTCCCCTAGGGCTTaGCCCTTCCCACTGGAGTCAATGGTGTGTCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: QCPNPGHTSPRA*PFPLESMVCLL Trigger: CAAGAGACACACCATTGACTCCAGTGGGAAGGGTCAAGCCCTAGGGGAGGTGTGCCCTGGATTGGGGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR TCA 72 bp | CATAGCCCTGTGGGAAGTTGCCAGGGTGCTTTAGAGTaGCAGGGCTGCAGTGCCCCAATCCAGGGCACACCT | + |
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Preference number: 3 (lower is better) Translates to: HSPVGSCQGALE*QGCSAPIQGTP Trigger: AGGTGTGCCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCCTGGCAACTTCCCACAGGGCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGATCCGTCAGGTGGCCTATCACCCACTGGATCCAGATCACGTCATAGGAGCTCAATGGTGTGTCTCTaGGCCTGCCAGCTGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: ADPSGGLSPTGSRSRHRSSMVCL*ACQLLA Trigger: GGCCAGCAGCTGGCAGGCCAAGAGACACACCATTGA...GCTCCTATGACGTGATCTGGATCCAGTGGGTGATAGGCCACCTGACGGATCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR GCA 72 bp | GGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTaGTGTGACCCATCACCAAAGAGGATATGGGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: GCVREELLGAAG*CDPSPKRIWGC Trigger: ACAGCCCCATATCCTCTTTGGTGATGGGTCACAGCAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR CCA 72 bp | TCTCAGGGCAAAGCTGTAGACATGGTAGATCTCATCTaGCAGGTTCTCCTGGCGCTCCTCGGCCAGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SQGKAVDMVDLI*QVLLALLGQEA Trigger: AGCCTCCTGGCCGAGGAGCGCCAGGAGAACCTGCCAGATGAGATCTACCATGTCTACAGCTTTGCCCTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCTAGGAGCTGCAGGCTGCTGTGACCCATCACCAAAGAGGATATGGGGCTGTCCCTCCTGGGCCATGTaGTCCTTGATGACGATGATG | + |
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Preference number: 3 (lower is better) Translates to: LLGAAGCCDPSPKRIWGCPSWAM*SLMTMM Trigger: CATCATCGTCATCAAGGACAACATGGCCCAGGAGGG...ACAGCCCCATATCCTCTTTGGTGATGGGTCACAGCAGCCTGCAGCTCCTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138889.8 |
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| 3UTR CCA 72 bp | GTAATTGGTACTGTCTGGCAGGTACCATGTGTGGCCTaGCTGTCCTGGAACACAGCAGTCCACACATTGAGG | + |
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Preference number: 3 (lower is better) Translates to: VIGTVWQVPCVA*LSWNTAVHTLR Trigger: CCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACACATGGTACCTGCCAGACAGTACCAATTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
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| 3UTR CCA 72 bp | CCAAAGAGGATATGGGGCTGTGACCATTTCTGTAATTaGTACTGTCTGGCAGGTACCATGTGTGGCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PKRIWGCDHFCN*YCLAGTMCGLA Trigger: AGCCAGGCCACACATGGTACCTGCCAGACAGTACCAATTACAGAAATGGTCACAGCCCCATATCCTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
||
| CDS-3UTR TCA 90 bp | ACGATGATGCCATTGGGGCGCAGGCCCCGCTTGCAGCGGCGCAGAAACTCAGCCCCATGTCGACCACCCTaGAGAGTGGCAGGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TMMPLGRRPRLQRRRNSAPCRPP*RVAGAG Trigger: GCCTGCTCCTGCCACTCTTCAGGGTGGTCGACATGG...GGCTGAGTTTCTGCGCCGCTGCAAGCGGGGCCTGCGCCCCAATGGCATCATCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR TCA 90 bp | AGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCACACCCTCCTGGGCCAGCCAGGCTCAGGGCTaGAGTCCTGCAGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSRHTLLSTSSRITPSWASQAQG*SPAAHS Trigger: GCTGTGGGCTGCAGGACTTCAGCCCTGAGCCTGGCT...GGCCCAGGAGGGTGTGATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGTGCGGATGATCCGGCGGACCACCTCAAGGTCCCGGCACACACTGCTGCATGCCGTCCACCGTaGGTGGGATCTGCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSADDPADHLKVPAHTAACRPP*VGSASS Trigger: ACTGGAAGCAGATCCCACCCACGGTGGACGGCATGC...AGCAGTGTGTGCCGGGACCTTGAGGTGGTCCGCCGGATCATCCGCACTGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAAGCGAGGCGTGAGCGTGCCGTATGTGTGCCCTCAGCACAGGCCAGCAGCATGCCGTCCACCGTaGGTGGGATCTGCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEKRGVSVPYVCPQHRPAACRPP*VGSASS Trigger: ACTGGAAGCAGATCCCACCCACGGTGGACGGCATGC...TGCTGGCCTGTGCTGAGGGCACACATACGGCACGCTCACGCCTCGCTTCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | AGTGCGGATGATCCGGCGGACCACCTCAAGGTCCCGGCACACACTGCTGTCCACGCATGCCGTCCACCGTaGGTGGGATCTGCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SADDPADHLKVPAHTAVHACRPP*VGSASS Trigger: ACTGGAAGCAGATCCCACCCACGGTGGACGGCATGC...GTGGACAGCAGTGTGTGCCGGGACCTTGAGGTGGTCCGCCGGATCATCCGCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAGTTGCCAGGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGTCTGGCAGGTTCTCCTaGCGCTCCTCGGCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKLPGCFRVTGLQCPNPGSGRFS*RSSARR Trigger: CCTCCTGGCCGAGGAGCGCCAGGAGAACCTGCCAGA...CCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCCTGGCAACTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTTGCCAGGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGCCATGTCGACCACCCTaGAGAGTGGCAGGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKLPGCFRVTGLQCPNPGPCRPP*RVAGAG Trigger: GCCTGCTCCTGCCACTCTTCAGGGTGGTCGACATGG...CCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCCTGGCAACTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGCCTGGCTGTCCTGGAACACAGCAGTCCACACATTGAGGTCCCTAGGCAGCCAGGCTCAGGGCTaGAGTCCTGCAGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVAWLSWNTAVHTLRSLGSQAQG*SPAAHS Trigger: GCTGTGGGCTGCAGGACTTCAGCCCTGAGCCTGGCT...GCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTGCCAGGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGCACCAGGAGGCTGAGGCCTaGAGTGCGGATGATCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPGCFRVTGLQCPNPGHQEAEA*SADDPA Trigger: CGCCGGATCATCCGCACTGCAGGCCTCAGCCTCCTG...GTGCCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCCTGGCAACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGCACACCTCCCCTGCCGTCCACCGTGGGTaGGATCTGCTTCCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCFRVTGLQCPNPGHTSPAVHRG*DLLPVG Trigger: ACCTACTGGAAGCAGATCCCACCCACGGTGGACGGC...AGGGGAGGTGTGCCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
||
| 3UTR CAA 72 bp | TCCTGGGCCATGTTGTCCTTGATGACGATGATGCCATaGGGGCGCAGGCCCCGCTTGCAGCGGCGCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWAMLSLMTMMP*GRRPRLQRRRN Trigger: GTTTCTGCGCCGCTGCAAGCGGGGCCTGCGCCCCAATGGCATCATCGTCATCAAGGACAACATGGCCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | CCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTGATCCGTCAGGTGGCCTGCCCCCAGGTAGGTCTTaGCTTTGGCCAGAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PACSGAETQPGADPSGGLPPGRS*LWPESL Trigger: AAGACTTTCTGGCCAAAGCCAAGACCTACCTGGGGG...CAGGCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS-3UTR TCA 90 bp | GCTGATCCGTCAGGTGGCCTATCACCCACTGGATCCAGATCACGTCATAGGAGCCCATGTCGACCACCCTaGAGAGTGGCAGGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADPSGGLSPTGSRSRHRSPCRPP*RVAGAG Trigger: GCCTGCTCCTGCCACTCTTCAGGGTGGTCGACATGG...GCTCCTATGACGTGATCTGGATCCAGTGGGTGATAGGCCACCTGACGGATCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACTGGAGTCAATGGTGTGTCTCTTGGCCTGCCAGCTGCTGGCCCCCAGCACTTCCGGGAGCTGTTaGGGTCGATGTTGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FPLESMVCLLACQLLAPSTSGSC*GRCWRC Trigger: ACATCTCCAACATCGACCTCAACAGCTCCCGGAAGT...GCTGGGGGCCAGCAGCTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCTGGCTGTCCTGGAACACAGCAGTCCACACATTGAGGTCCCTAGGCAAGCATGCCGTCCACCGTaGGTGGGATCTGCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGLAVLEHSSPHIEVPRQACRPP*VGSASS Trigger: ACTGGAAGCAGATCCCACCCACGGTGGACGGCATGC...TTGCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCACTGGAGTCAATGGTGTGTCTCTTGGCCTGCCAGCTGCTGGCCCCCAGCAGGATCACACCCTCCTaGGCCATGTTGTCCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPLESMVCLLACQLLAPSRITPS*AMLSLM Trigger: CATCAAGGACAACATGGCCCAGGAGGGTGTGATCCT...GCTGGGGGCCAGCAGCTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR GCA 90 bp | TTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTGCTGTGACCCAGGTCCCGGCACACACTaGTGTCCACATCGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIGCVREELLGAAGCCDPGPGTH*CPHRPG Trigger: TCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACC...TGGGTCACAGCAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR TCA 90 bp | GCGTGCCGTATGTGTGCCCTCAGCACAGGCCAGCAAGCGTCTCTCTCGATCTTAACTTCCGGGAGCTGTTaGGGTCGATGTTGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRMCALSTGQQASLSILTSGSC*GRCWRC Trigger: ACATCTCCAACATCGACCTCAACAGCTCCCGGAAGT...TAAGATCGAGAGAGACGCTTGCTGGCCTGTGCTGAGGGCACACATACGGCACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | CACCTCAAGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCACACCCTCGGTAGGTCTTGGCTTTaGCCAGAAAGTCTTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLKVPAHTAVHIVQDHTLGRSWL*PESLPS Trigger: TGACGGAAGACTTTCTGGCCAAAGCCAAGACCTACC...GAGGGTGTGATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCTTGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | CTTGACCCTTCCCACTGGAGTCAATGGTGTGTCTCTTGGCCTGCCAGCTGCTGGCCCCCAGGTAGGTCTTaGCTTTGGCCAGAAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDPSHWSQWCVSWPASCWPPGRS*LWPESL Trigger: AAGACTTTCTGGCCAAAGCCAAGACCTACCTGGGGG...CCAGCAGCTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAAGGGTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR GCA 90 bp | CGGACCACCTCAAGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCACATCCCTTAAAAACCTCTaGAGAAACTTCCGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTTSRSRHTLLSTSSRITSLKNL*RNFREL Trigger: CAGCTCCCGGAAGTTTCTGCAGAGGTTTTTAAGGGA...TGTGATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCTTGAGGTGGTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | CGGCGGACCACCTCAAGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCGCTTCCAGTAGGTCTTaGCCTTCGAATAAAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTTSRSRHTLLSTSSRIASSRS*PSNKTV Trigger: AACAGTTTTATTCGAAGGCCAAGACCTACTGGAAGC...GATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCTTGAGGTGGTCCGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTGATGACGATGATGCCATTGGGGCGCAGGCCCCGCTTGCAGCGGCGCAGAGCTTCCAGTAGGTCTTaGCCTTCGAATAAAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLMTMMPLGRRPRLQRRRASSRS*PSNKTV Trigger: AACAGTTTTATTCGAAGGCCAAGACCTACTGGAAGC...TCTGCGCCGCTGCAAGCGGGGCCTGCGCCCCAATGGCATCATCGTCATCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR CCA 90 bp | CTTGACCCTTCCCACTGGAGTCAATGGTGTGTCTCTTGGCCTGCCAGCTGCTGGGGTAGGTCTTGGCTTTaGCCAGAAAGTCTTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDPSHWSQWCVSWPASCWGRSWL*PESLPS Trigger: TGACGGAAGACTTTCTGGCCAAAGCCAAGACCTACC...CCAGCAGCTGGCAGGCCAAGAGACACACCATTGACTCCAGTGGGAAGGGTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCTGGCTGTCCTGGAACACAGCAGTCCACACATTGAGGTCCCTAGGCAAATGGTAGATCTCATCTaGCAGGTTCTCCTGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGLAVLEHSSPHIEVPRQMVDLI*QVLLAL Trigger: GAGCGCCAGGAGAACCTGCCAGATGAGATCTACCAT...TTGCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGCACACCTCCCCTGCTTCCAGTAGGTCTTaGCCTTCGAATAAAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GCFRVTGLQCPNPGHTSPASSRS*PSNKTV Trigger: AACAGTTTTATTCGAAGGCCAAGACCTACTGGAAGC...AGGGGAGGTGTGCCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCTGGCTGTCCTGGAACACAGCAGTCCACACATTGAGGTCCCTAGGCAATCCCTTAAAAACCTCTaGAGAAACTTCCGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGLAVLEHSSPHIEVPRQSLKNL*RNFREL Trigger: CAGCTCCCGGAAGTTTCTGCAGAGGTTTTTAAGGGA...TTGCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGCCAGGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGCACGCTTCCAGTAGGTCTTaGCCTTCGAATAAAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLPGCFRVTGLQCPNPGHASSRS*PSNKTV Trigger: AACAGTTTTATTCGAAGGCCAAGACCTACTGGAAGC...GTGCCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCCTGGCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
||
| CDS-3UTR CAA 90 bp | CTCGGCCAGGAGGCTGAGGCCTGCAGTGCGGATGATCCGGCGGACCACCTCAAGGGCAGGAGCAGGCGCTaGGTGATCCTTCCAATACCA | + |
|
Preference number: 5 (lower is better) Translates to: LGQEAEACSADDPADHLKGRSRR*VILPIP Trigger: TGGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCC...CTTGAGGTGGTCCGCCGGATCATCCGCACTGCAGGCCTCAGCCTCCTGGCCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR CAA 90 bp | GGCCCCGCTTGCAGCGGCGCAGAAACTCAGCCAGGTGCTGATCCGTCAGGTGGCCTGTTGAGGTCGATGTaGGAGATGTGGCCATACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPACSGAETQPGADPSGGLLRSM*EMWPYP Trigger: GGGGTATGGCCACATCTCCAACATCGACCTCAACAG...GCCACCTGACGGATCAGCACCTGGCTGAGTTTCTGCGCCGCTGCAAGCGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS-3UTR CAA 90 bp | AGTGCGGATGATCCGGCGGACCACCTCAAGGTCCCGGCACACACTGCTGTCCACGGCAGGAGCAGGCGCTaGGTGATCCTTCCAATACCA | + |
|
Preference number: 5 (lower is better) Translates to: SADDPADHLKVPAHTAVHGRSRR*VILPIP Trigger: TGGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCC...GTGGACAGCAGTGTGTGCCGGGACCTTGAGGTGGTCCGCCGGATCATCCGCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTGCAGTGCCCCAATCCAGGGCACACCTCCCCTAGGGCTTGACCCTTCCAACTTCCGGGAGCTGTaGAGGTCGATGTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QGCSAPIQGTPPLGLDPSNFREL*RSMLEM Trigger: CATCTCCAACATCGACCTCAACAGCTCCCGGAAGTT...GGAAGGGTCAAGCCCTAGGGGAGGTGTGCCCTGGATTGGGGCACTGCAGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTTTAGAGTGACAGGGCTGCAGTGCCCCAATCCAGGGCACACCTCCCCTGGCAGGAGCAGGCGCTaGGTGATCCTTCCAATACCA | + |
|
Preference number: 5 (lower is better) Translates to: GCFRVTGLQCPNPGHTSPGRSRR*VILPIP Trigger: TGGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCC...AGGGGAGGTGTGCCCTGGATTGGGGCACTGCAGCCCTGTCACTCTAAAGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041830.10 ENSMUST00000138889.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCCGGCACACACTGCTGTCCACATCGTCCAGGATCACACCCTCCTGGGCAACTTCCGGGAGCTGTaGAGGTCGATGTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KVPAHTAVHIVQDHTLLGNFREL*RSMLEM Trigger: CATCTCCAACATCGACCTCAACAGCTCCCGGAAGTT...GCCCAGGAGGGTGTGATCCTGGACGATGTGGACAGCAGTGTGTGCCGGGACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143970.3 |
||
| CDS CCA 90 bp | CAGAAAGTCTTCCGTCACGTCGACCATGTCGACCACCCTGAAGAGTaGCAGGAGCAGGCGCTTGGTGATCCTTCCAATACCAGCGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QKVFRHVDHVDHPEE*QEQALGDPSNTSAT Trigger: TGTGGCGCTGGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCCACTCTTCAGGGTGGTCGACATGGTCGACGTGACGGAAGACTTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000143970.3 ENSMUST00000152374.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATCCGTCAGGTGGCCTATCACCCACTGGATCCAGATCACGTCATAGGAGCGGCAGGAGCAGGCGCTaGGTGATCCTTCCAATACCA | + |
|
Preference number: 5 (lower is better) Translates to: ADPSGGLSPTGSRSRHRSGRSRR*VILPIP Trigger: TGGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCC...GCTCCTATGACGTGATCTGGATCCAGTGGGTGATAGGCCACCTGACGGATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129712.3 ENSMUST00000138889.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGGCCTGGCTGTCCTGGAACACAGCAGTCCACACATTGAGGTCCCTAGGCCCCTCCTGGGCCATGTaGTCCTTGATGACGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: CVAWLSWNTAVHTLRSLGPSWAM*SLMTMM Trigger: CATCATCGTCATCAAGGACAACATGGCCCAGGAGGG...GCCTAGGGACCTCAATGTGTGGACTGCTGTGTTCCAGGACAGCCAGGCCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CAA 90 bp | GACTCACCCTTTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAGGCTGCTGTTGAGGTCGATGTaGGAGATGTGGCCATACCCC | + |
|
Preference number: 5 (lower is better) Translates to: DSPFYWLCQRGAPRSCRLLLRSM*EMWPYP Trigger: GGGGTATGGCCACATCTCCAACATCGACCTCAACAG...CAGCCTGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAAAGGGTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CAA 90 bp | AATAGGACTCACCCTTTTATTGGCTGTGTCAGAGAGGAGCTCCTAGGAGCTGCAATGACGATGATGCCATaGGGGCGCAGGCCCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NRTHPFIGCVREELLGAAMTMMP*GRRPRL Trigger: CAAGCGGGGCCTGCGCCCCAATGGCATCATCGTCAT...TGCAGCTCCTAGGAGCTCCTCTCTGACACAGCCAATAAAAGGGTGAGTCCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS-3UTR CAA 90 bp | GAGCTCCTAGGAGCTGCAGGCTGCTGTGACCCATCACCAAAGAGGATATGGGGCAAGTCCCTGTCTTGTTaGGGCCTTCCCTTAAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: ELLGAAGCCDPSPKRIWGKSLSC*GLPLKT Trigger: GGTTTTTAAGGGAAGGCCCAAACAAGACAGGGACTT...GCCCCATATCCTCTTTGGTGATGGGTCACAGCAGCCTGCAGCTCCTAGGAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041830.10 |
||
| CDS CAA 90 bp | ACGTCGACCATGTCGACCACCCTGAAGAGTGGCAGGAGCAGGCGCTaGGTGATCCTTCCAATACCAGCGCCACAGTCCAAGGCACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSTMSTTLKSGRSRR*VILPIPAPQSKAQE Trigger: TTCCTGTGCCTTGGACTGTGGCGCTGGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCCACTCTTCAGGGTGGTCGACATGGTCGACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 ENSMUST00000152374.8 |
||
| CDS CCA 72 bp | TTCCGTCACGTCGACCATGTCGACCACCCTGAAGAGTaGCAGGAGCAGGCGCTTGGTGATCCTTCCAATACC | + |
|
Preference number: 6 (lower is better) Translates to: FRHVDHVDHPEE*QEQALGDPSNT Trigger: GGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCCACTCTTCAGGGTGGTCGACATGGTCGACGTGACGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000143970.3 ENSMUST00000152374.8 |
||
| CDS CCA 72 bp | CCCTCTTGCCCTCTTCCCCCAGGTAGGTCTTGGCTTTaGCCAGAAAGTCTTCCGTCACGTCGACCATGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PSCPLPPGRSWL*PESLPSRRPCR Trigger: TCGACATGGTCGACGTGACGGAAGACTTTCTGGCCAAAGCCAAGACCTACCTGGGGGAAGAGGGCAAGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000143970.3 ENSMUST00000152374.8 |
||
| CDS CAA 72 bp | ATGTCGACCACCCTGAAGAGTGGCAGGAGCAGGCGCTaGGTGATCCTTCCAATACCAGCGCCACAGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: MSTTLKSGRSRR*VILPIPAPQSK Trigger: CTTGGACTGTGGCGCTGGTATTGGAAGGATCACCAAGCGCCTGCTCCTGCCACTCTTCAGGGTGGTCGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000129712.3 ENSMUST00000138889.8 ENSMUST00000143970.3 ENSMUST00000152374.8 |
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| CDS CAA 72 bp | CCAGCGCCACAGTCCAAGGCACAGGAAGTCCCTGTCTaGTTTGGGCCTTCCCTTAAAAACCTCTGCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: PAPQSKAQEVPV*FGPSLKNLCRN Trigger: GTTTCTGCAGAGGTTTTTAAGGGAAGGCCCAAACAAGACAGGGACTTCCTGTGCCTTGGACTGTGGCGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000128303.7 ENSMUST00000143970.3 ENSMUST00000152374.8 |
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| CDS CAA 90 bp | CTTCCAATACCAGCGCCACAGTCCAAGGCACAGGAAGTCCCTGTCTaGTTTGGGCCTTCCCTTAAAAACCTCTGCAGAAACTTCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPIPAPQSKAQEVPV*FGPSLKNLCRNFRE Trigger: CTCCCGGAAGTTTCTGCAGAGGTTTTTAAGGGAAGGCCCAAACAAGACAGGGACTTCCTGTGCCTTGGACTGTGGCGCTGGTATTGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000128303.7 ENSMUST00000143970.3 ENSMUST00000152374.8 |
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| CDS GCA 72 bp | GTCCCTGTCTTGTTTGGGCCTTCCCTTAAAAACCTCTaGAGAAACTTCCGGGAGCTGTTGAGGTCGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: VPVLFGPSLKNL*RNFRELLRSML Trigger: CAACATCGACCTCAACAGCTCCCGGAAGTTTCTGCAGAGGTTTTTAAGGGAAGGCCCAAACAAGACAGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000041830.10 ENSMUST00000127566.3 ENSMUST00000128303.7 ENSMUST00000143970.3 ENSMUST00000152374.8 |
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