Pregenerated sensors for NTM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059974Ensembl transcript IDs: ENSMUST00000075069.11, ENSMUST00000115236.2, ENSMUST00000115237.8, ENSMUST00000140118.8, ENSMUST00000155308.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTGCTGTCCGTTAATGCCCCAAGGTGTGATGGAGAAGCCAAGCTaGAGGCCTCCTCCTCAGAGAGCCACACCTGGAAAGATGCTGCGC | + |
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Preference number: 1 (lower is better) Translates to: ACCPLMPQGVMEKPS*RPPPQRATPGKMLR Trigger: GCGCAGCATCTTTCCAGGTGTGGCTCTCTGAGGAGGAGGCCTCCAGCTTGGCTTCTCCATCACACCTTGGGGCATTAACGGACAGCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR TCA 90 bp | ACTCCAGAATGTTTCATGGTGGGGCACTTTAGTGGGCAGAGTGGCTaGGCCCTTGCCCACCCTGGCAACAGAGAGGTCACACAGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: TPECFMVGHFSGQSG*ALAHPGNREVTQCS Trigger: GCTGCACTGTGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGCTCAGCCACTCTGCCCACTAAAGTGCCCCACCATGAAACATTCTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR CCA 90 bp | TTGCCCACCCTGGCAACAGAGAGGTCACACAGTGCAGCTTGTGGGTaGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTGGGAAAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LPTLATERSHSAACG*VQARCAFFPLGKRK Trigger: CTTTCTTTTCCCAAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACTGTGTGACCTCTCTGTTGCCAGGGTGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR GCA 90 bp | TTCTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTaGTGTTGTATTGAGATGCGGTGGCAGCAGCTCTCCCCAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: FSEFHLILTCCFILQ*CCIEMRWQQLSPAG Trigger: CCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR GCA 90 bp | GGGCTTAAGCAAGTGATTACTGTTGGTTTAGTTGTTTCAGTTGCTTaGTGTCCGTTAATGCCCCAAGGTGTGATGGAGAAGCCAAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: GLKQVITVGLVVSVA*CPLMPQGVMEKPSW Trigger: CCAGCTTGGCTTCTCCATCACACCTTGGGGCATTAACGGACAGCAAGCAACTGAAACAACTAAACCAACAGTAATCACTTGCTTAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR CCA 90 bp | CCCTTGTTTCTTGCTCTGTGCTTGTGTCTATGGACCGATGAAATTTaGGATGGCCAACTCCAGAATGTTTCATGGTGGGGCACTTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: PLFLALCLCLWTDEI*DGQLQNVSWWGTLV Trigger: CACTAAAGTGCCCCACCATGAAACATTCTGGAGTTGGCCATCCCAAATTTCATCGGTCCATAGACACAAGCACAGAGCAAGAAACAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR CCA 90 bp | GTGGCACATCTAAGGCCCTTGTTTCTTGCTCTGTGCTTGTGTCTATaGACCGATGAAATTTGGGATGGCCAACTCCAGAATGTTTCATGG | + |
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Preference number: 1 (lower is better) Translates to: VAHLRPLFLALCLCL*TDEIWDGQLQNVSW Trigger: CCATGAAACATTCTGGAGTTGGCCATCCCAAATTTCATCGGTCCATAGACACAAGCACAGAGCAAGAAACAAGGGCCTTAGATGTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR TCA 90 bp | CAGTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTaGTTCTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTG | + |
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Preference number: 1 (lower is better) Translates to: QYALSPSLEFLSHWL*FSEFHLILTCCFIL Trigger: CAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCCTCCAGATTTCACACTTCATGACACACGCGACTGTCACACAGCCCACCAGTGGGCAGAGTGGCTaGGCCCTTGCCCACCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FFLQISHFMTHATVTQPTSGQSG*ALAHPG Trigger: GCCAGGGTGGGCAAGGGCTCAGCCACTCTGCCCACT...GGTGGGCTGTGTGACAGTCGCGTGTGTCATGAAGTGTGAAATCTGGAGGAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR CAA 90 bp | AATGTTTCATGGTGGGGCACTTTAGTGGGCAGAGTGGCTGAGCCCTaGCCCACCCTGGCAACAGAGAGGTCACACAGTGCAGCTTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NVSWWGTLVGRVAEP*PTLATERSHSAACG Trigger: CCCACAAGCTGCACTGTGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGCTCAGCCACTCTGCCCACTAAAGTGCCCCACCATGAAACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGCACATCTAAGGCCCTTGTTTCTTGCTCTGTGCTTGTGTCTATGGACCGATGTATTGAGATGCGGTaGCAGCAGCTCTCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RGTSKALVSCSVLVSMDRCIEMR*QQLSPA Trigger: TGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACA...TCGGTCCATAGACACAAGCACAGAGCAAGAAACAAGGGCCTTAGATGTGCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCAGAGAGCCACACCTGGAAAGATGCTGCGCCTGGTATTAGTTATTGTTTGTATTGAGATGCGGTaGCAGCAGCTCTCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PPQRATPGKMLRLVLVIVCIEMR*QQLSPA Trigger: TGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACA...AACAATAACTAATACCAGGCGCAGCATCTTTCCAGGTGTGGCTCTCTGAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR CAA 90 bp | GGGCCCTTCGTGGCACATCTAAGGCCCTTGTTTCTTGCTCTGTGCTaGTGTCTATGGACCGATGAAATTTGGGATGGCCAACTCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: GPFVAHLRPLFLALC*CLWTDEIWDGQLQN Trigger: ATTCTGGAGTTGGCCATCCCAAATTTCATCGGTCCATAGACACAAGCACAGAGCAAGAAACAAGGGCCTTAGATGTGCCACGAAGGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR GCA 90 bp | TTCGTGGCACATCTAAGGCCCTTGTTTCTTGCTCTGTGCTTGTGTCTATGGACCCCCTTTACCACAGTATaGTTTGTCCCCCTCCCTCGA | + |
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Preference number: 2 (lower is better) Translates to: FVAHLRPLFLALCLCLWTPFTTV*FVPLPR Trigger: TCGAGGGAGGGGGACAAAGCATACTGTGGTAAAGGG...GGTCCATAGACACAAGCACAGAGCAAGAAACAAGGGCCTTAGATGTGCCACGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCGTTAATGCCCCAAGGTGTGATGGAGAAGCCAAGCTGGAGGCCTCCTCCTATCTTTTGTGACTGTTaGTTGTGGGGTTATGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: CPLMPQGVMEKPSWRPPPIFCDC*LWGYGA Trigger: AGCACCATAACCCCACAAGCAACAGTCACAAAAGAT...AGGAGGAGGCCTCCAGCTTGGCTTCTCCATCACACCTTGGGGCATTAACGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTCGGAATTTCTGTATTGAGATGCGGTaGCAGCAGCTCTCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LCPPPSNFCLIGCDSRNFCIEMR*QQLSPA Trigger: TGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACA...GAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR TCA 90 bp | TCACACAGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTCTGTCTCATTGGCTGTaGTTCTCGGAATTTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: SHSAACGWVQARCAFFPLLSHWL*FSEFHL Trigger: CAAATGAAATTCCGAGAATCACAGCCAATGAGACAG...AAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACTGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAATGGTATCTTTTGTGACTGTTGCTTGTGGGGTTATGGTGCTGTCAGGCTGGCTGTTGTATTGAGATaGGGTGGCAGCAGCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LNGIFCDCCLWGYGAVRLAVVLR*GGSSSP Trigger: GGGAGAGCTGCTGCCACCGCATCTCAATACAACAGC...CAGCCTGACAGCACCATAACCCCACAAGCAACAGTCACAAAAGATACCATTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR GCA 90 bp | GTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTCGGAATTTCATTTGCTGTTGTATTGAGATaGGGTGGCAGCAGCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VPLPRISVSLAVILGISFAVVLR*GGSSSP Trigger: GGGAGAGCTGCTGCCACCGCATCTCAATACAACAGC...AAATGAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAATGTTTCATGGTGGGGCACTTTAGTGGGCAGAGTGGCTGAGCCCTTGCCCTTGATTCTGACTTGTTaGTTCATTTTGCAGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: QNVSWWGTLVGRVAEPLPLILTC*FILQCC Trigger: ACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAA...GGGCAAGGGCTCAGCCACTCTGCCCACTAAAGTGCCCCACCATGAAACATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR GCA 90 bp | TCACACAGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTCTTGTTGCTTCATTTTaGAGTGCTGTTGTATTGAGA | + |
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Preference number: 2 (lower is better) Translates to: SHSAACGWVQARCAFFPLLVASF*SAVVLR Trigger: TCTCAATACAACAGCACTGCAAAATGAAGCAACAAG...AAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACTGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTGGGAAATTGATTCTGACTTGTTaGTTCATTTTGCAGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SAACGWVQARCAFFPLGKLILTC*FILQCC Trigger: ACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAA...TTTCCCAAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR TCA 90 bp | TTCGTGGCACATCTAAGGCCCTTGTTTCTTGCTCTGTGCTTGTGTCTATGGACCCTGTCTCATTGGCTGTaGTTCTCGGAATTTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: FVAHLRPLFLALCLCLWTLSHWL*FSEFHL Trigger: CAAATGAAATTCCGAGAATCACAGCCAATGAGACAG...GGTCCATAGACACAAGCACAGAGCAAGAAACAAGGGCCTTAGATGTGCCACGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTGATTACTGTTGGTTTAGTTGTTTCAGTTGCTTGCTGTCCGTTAATGCCCCCTTTACCACAGTATaGTTTGTCCCCCTCCCTCGA | + |
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Preference number: 2 (lower is better) Translates to: ASDYCWFSCFSCLLSVNAPFTTV*FVPLPR Trigger: TCGAGGGAGGGGGACAAAGCATACTGTGGTAAAGGG...GGCATTAACGGACAGCAAGCAACTGAAACAACTAAACCAACAGTAATCACTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGCTGATTACACAATTACCGGTAAACTCTATCATCTTTTAGAAGATCAAGAGTGGCTGAGCCCTTaGCCACCCTGGCAACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: EGADYTITGKLYHLLEDQEWLSP*PPWQQR Trigger: TCTCTGTTGCCAGGGTGGGCAAGGGCTCAGCCACTC...TTGATCTTCTAAAAGATGATAGAGTTTACCGGTAATTGTGTAATCAGCTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGCTGATTACACAATTACCGGTAAACTCTATCATCTTTTAGAAGATCAAAGCCCTTGCCCACCCTaGCAACAGAGAGGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: EGADYTITGKLYHLLEDQSPCPP*QQRGHT Trigger: TGTGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGCT...TTGATCTTCTAAAAGATGATAGAGTTTACCGGTAATTGTGTAATCAGCTCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTTGTTGCTTCATTTTaGAGTGCTGTTGTATTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TTVCFVPLPRISVSLAVILVASF*SAVVLR Trigger: TCTCAATACAACAGCACTGCAAAATGAAGCAACAAG...AATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATACTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACCACAGTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGCTTGTTGCTTCATTTTaGAGTGCTGTTGTATTGAGA | + |
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Preference number: 2 (lower is better) Translates to: FTTVCFVPLPRISVSLAVLVASF*SAVVLR Trigger: TCTCAATACAACAGCACTGCAAAATGAAGCAACAAG...CACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATACTGTGGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCTAGGTGTGCCTTCTTCCCACTTGGGAAAAGAAAGAAAACTCAGCGGTACCTTGATTCTGACTTGTTaGTTCATTTTGCAGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: KLGVPSSHLGKERKLSGTLILTC*FILQCC Trigger: ACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAA...GGTACCGCTGAGTTTTCTTTCTTTTCCCAAGTGGGAAGAAGGCACACCTAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR CAA 90 bp | TTTACCACAGTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATaGGCTGTGATTCTCGGAATTTCATTTGATTCTGACTTGTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: FTTVCFVPLPRISVS*AVILGISFDSDLLL Trigger: AAGCAACAAGTCAGAATCAAATGAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATACTGTGGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTAAGCAAGTGATTACTGTTGGTTTAGTTGTTTCAGTTGCTTGCTGTCCGTGCCTTCTTCCCACTTaGGAAAAGAAAGAAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: GLKQVITVGLVVSVACCPCLLPT*EKKENS Trigger: TGAGTTTTCTTTCTTTTCCCAAGTGGGAAGAAGGCA...CGGACAGCAAGCAACTGAAACAACTAAACCAACAGTAATCACTTGCTTAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGCTGATTACACAATTACCGGTAAACTCTATCATCTTTTAGAAGATCAACAGAATGTTTCATGGTaGGGCACTTTAGTGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: EGADYTITGKLYHLLEDQQNVSW*GTLVGR Trigger: TCTGCCCACTAAAGTGCCCCACCATGAAACATTCTG...TTGATCTTCTAAAAGATGATAGAGTTTACCGGTAATTGTGTAATCAGCTCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR TCA 72 bp | TGTTTCATGGTGGGGCACTTTAGTGGGCAGAGTGGCTaGGCCCTTGCCCACCCTGGCAACAGAGAGGTCACA | + |
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Preference number: 3 (lower is better) Translates to: CFMVGHFSGQSG*ALAHPGNREVT Trigger: TGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGCTCAGCCACTCTGCCCACTAAAGTGCCCCACCATGAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR CCA 72 bp | CTGGCAACAGAGAGGTCACACAGTGCAGCTTGTGGGTaGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: LATERSHSAACG*VQARCAFFPLG Trigger: CCCAAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACTGTGTGACCTCTCTGTTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR CCA 72 bp | CCGTTAATGCCCCAAGGTGTGATGGAGAAGCCAAGCTaGAGGCCTCCTCCTCAGAGAGCCACACCTGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: PLMPQGVMEKPS*RPPPQRATPGK Trigger: CTTTCCAGGTGTGGCTCTCTGAGGAGGAGGCCTCCAGCTTGGCTTCTCCATCACACCTTGGGGCATTAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR CAA 90 bp | AGCCCTTGCCCACCCTGGCAACAGAGAGGTCACACAGTGCAGCTTGTGGGTGGGGTGCCTTCTTCCCACTaGGGAAAAGAAAGAAAACTC | + |
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Preference number: 3 (lower is better) Translates to: SPCPPWQQRGHTVQLVGGVPSSH*GKERKL Trigger: GAGTTTTCTTTCTTTTCCCAAGTGGGAAGAAGGCAC...CCCACCCACAAGCTGCACTGTGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR CCA 72 bp | GATGAAATTTGGGATGGCCAACTCCAGAATGTTTCATaGTGGGGCACTTTAGTGGGCAGAGTGGCTGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: DEIWDGQLQNVS*WGTLVGRVAEP Trigger: GGGCTCAGCCACTCTGCCCACTAAAGTGCCCCACCATGAAACATTCTGGAGTTGGCCATCCCAAATTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCCCTTGCCCACCCTGGCAACAGAGAGGTCACACAGTGCAGCTTGTGGGTTTCTCGGAATTTCATTaGATTCTGACTTGTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LSPCPPWQQRGHTVQLVGFSEFH*ILTCCF Trigger: GAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAA...ACCCACAAGCTGCACTGTGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR-3UTR CAA 90 bp | GCAAGTGATTACTGTTGGTTTAGTTGTTTCAGTTGCTTGCTGTCCGTTAATGCCAGAGTGGCTGAGCCCTaGCCCACCCTGGCAACAGAG | + |
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Preference number: 3 (lower is better) Translates to: ASDYCWFSCFSCLLSVNARVAEP*PTLATE Trigger: CTCTGTTGCCAGGGTGGGCAAGGGCTCAGCCACTCT...GGCATTAACGGACAGCAAGCAACTGAAACAACTAAACCAACAGTAATCACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR TCA 72 bp | TCTGACTTGTTGCTTCATTTTGCAGTGCTGTTGTATTaGGATGCGGTGGCAGCAGCTCTCCCCAGCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SDLLLHFAVLLY*DAVAAALPSRE Trigger: TTCCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAACAGCACTGCAAAATGAAGCAACAAGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| 3UTR-3UTR CAA 90 bp | TGTCCGTTAATGCCCCAAGGTGTGATGGAGAAGCCAAGCTGGAGGCCTCCTCCTTTTGATTCTGACTTGTaGCTTCATTTTGCAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: CPLMPQGVMEKPSWRPPPFDSDL*LHFAVL Trigger: CAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAA...AGGAGGAGGCCTCCAGCTTGGCTTCTCCATCACACCTTGGGGCATTAACGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR CAA 90 bp | GGGCTTAAGCAAGTGATTACTGTTGGTTTAGTTGTTTCAGTTGCTTGCTGTCCGGCACATCTAAGGCCCTaGTTTCTTGCTCTGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GLKQVITVGLVVSVACCPAHLRP*FLALCL Trigger: CAAGCACAGAGCAAGAAACAAGGGCCTTAGATGTGC...CGGACAGCAAGCAACTGAAACAACTAAACCAACAGTAATCACTTGCTTAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCCTCCAGATTTCACACTTCATGACACACGCGACTGTCACACAGCCCACCTTCTCGGAATTTCATTaGATTCTGACTTGTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: FFLQISHFMTHATVTQPTFSEFH*ILTCCF Trigger: GAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAA...GGTGGGCTGTGTGACAGTCGCGTGTGTCATGAAGTGTGAAATCTGGAGGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| 3UTR TCA 72 bp | TTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTaGTTCTCGGAATTTCATTTGATTCTGACTTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSPSLEFLSHWL*FSEFHLILTCC Trigger: GCAACAAGTCAGAATCAAATGAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| 3UTR TCA 72 bp | CTTGTTTCTTGCTCTGTGCTTGTGTCTATGGACCGATaGAATTTGGGATGGCCAACTCCAGAATGTTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LVSCSVLVSMDR*NLGWPTPECFM Trigger: CATGAAACATTCTGGAGTTGGCCATCCCAAATTTCATCGGTCCATAGACACAAGCACAGAGCAAGAAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| 3UTR TCA 72 bp | ATGTGTTTCTGGTGGATTTGCCAAATCCTCACCAGGTaGTTAATGCCTGGTGAATGGTCCACCAGATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: MCFWWICQILTR*LMPGEWSTRCK Trigger: TTTACATCTGGTGGACCATTCACCAGGCATTAATCACCTGGTGAGGATTTGGCAAATCCACCAGAAACACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| 3UTR GCA 72 bp | TTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTaGTGTTGTATTGAGATGCGGTGGCAGCAGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FHLILTCCFILQ*CCIEMRWQQLS Trigger: GGAGAGCTGCTGCCACCGCATCTCAATACAACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| 3UTR GCA 72 bp | CAAGTGATTACTGTTGGTTTAGTTGTTTCAGTTGCTTaGTGTCCGTTAATGCCCCAAGGTGTGATGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QVITVGLVVSVA*CPLMPQGVMEK Trigger: CTTCTCCATCACACCTTGGGGCATTAACGGACAGCAAGCAACTGAAACAACTAAACCAACAGTAATCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| 3UTR CCA 72 bp | CAAAAGCTTAATGGTATCTTTTGTGACTGTTGCTTGTaGGGTTATGGTGCTGTCAGGCTGTCTTGTTTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: QKLNGIFCDCCL*GYGAVRLSCFV Trigger: AACGAAACAAGACAGCCTGACAGCACCATAACCCCACAAGCAACAGTCACAAAAGATACCATTAAGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| 3UTR GCA 72 bp | TCGCTTTTAATACTTAAACACACTTCCCATCGCCCTTaGCTGTGTAGTTTTAGTCTTGTCTCTCTCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLILKHTSHRP*LCSFSLVSLSL Trigger: AAGAGAGAGAGAGACAAGACTAAAACTACACAGGCAAGGGCGATGGGAAGTGTGTTTAAGTATTAAAAGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTGTTGTATTGAGATGCGGTGGCAGCAGCTCTCCCCAGCAGGGAAGGGGCGCACCGGCACTCCTTaGAAGAGGCACAGAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCCCIEMRWQQLSPAGKGRTGTP*KRHRAA Trigger: GGCGGCTCTGTGCCTCTTCCAAGGAGTGCCGGTGCG...CCCCTTCCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAACAGCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR TCA 90 bp | GTTGTATTGAGATGCGGTGGCAGCAGCTCTCCCCAGCAGGGAAGGGGCACTCACTGTCAATTGTGCACCTaGGGGTGGCGCTCTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLRCGGSSSPQQGRGTHCQLCT*GWRSPP Trigger: AGGGGGAGAGCGCCACCCTCAGGTGCACAATTGACA...GTGAGTGCCCCTTCCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGCCCACCCTGGCAACAGAGAGGTCACACAGTGCAGCTTGTGGGTGGGTATGCTGTACTGGGTCTaGGTGTTACTCAGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ALAHPGNREVTQCSLWVGMLYWV*VLLRRT Trigger: GGTCCTCCTGAGTAACACCCAGACCCAGTACAGCAT...ACCCACCCACAAGCTGCACTGTGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTATGTCAATTGTGCACCTaGGGGTGGCGCTCTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAHSFPSISPTLLHTLLLCQLCT*GWRSPP Trigger: AGGGGGAGAGCGCCACCCTCAGGTGCACAATTGACA...TAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCGTTAATGCCCCAAGGTGTGATGGAGAAGCCAAGCTGGAGGCCTCCTCCTCGGGACCAAATAGCATaGTGCTGGCGTTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLMPQGVMEKPSWRPPPRDQIA*CWRWCD Trigger: GTCACACCAACGCCAGCATCATGCTATTTGGTCCCG...AGGAGGAGGCCTCCAGCTTGGCTTCTCCATCACACCTTGGGGCATTAACGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR CCA 90 bp | GTTGTATTGAGATGCGGTGGCAGCAGCTCTCCCCAGCAGGGAAGGGGCACTCACACTTGTACAATGAGGTaGACCCTGGAGGTCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLRCGGSSSPQQGRGTHTCTMR*TLEVLG Trigger: CCCTAAGACCTCCAGGGTCCACCTCATTGTACAAGT...GTGAGTGCCCCTTCCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAGCCCTTGCCCACCCTGGCAACAGAGAGGTCACACAGTGCAGCTTGTGCAAAGCCAACGGCCTTaGGAGAAATATGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSPCPPWQQRGHTVQLVQSQRP*EKYVSR Trigger: CCTGGAGACATATTTCTCCCAAGGCCGTTGGCTTTG...CACAAGCTGCACTGTGTGACCTCTCTGTTGCCAGGGTGGGCAAGGGCTCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCAGAGAGCCACACCTGGAAAGATGCTGCGCCTGGTATTAGTTATTGTTTGCAGAGTCCCCTTCTaGCCCACGGGGACACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPQRATPGKMLRLVLVIVCRVPF*PTGTPV Trigger: CACAGGTGTCCCCGTGGGGCAGAAGGGGACTCTGCA...AACAATAACTAATACCAGGCGCAGCATCTTTCCAGGTGTGGCTCTCTGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR TCA 90 bp | GCTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACCCTCTCACCAAATAGCATaGTGCTGGCGTTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHSFPSISPTLLHTLLLPSHQIA*CWRWCD Trigger: GTCACACCAACGCCAGCATCATGCTATTTGGTGAGA...GGGTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTATTCTTTCACATACATTACCCTGCTCACTCCTTCCCCTCCATCAGCCTGCAGAGTCCCCTTCTaGCCCACGGGGACACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSYSFTYITLLTPSPPSACRVPF*PTGTPV Trigger: CACAGGTGTCCCCGTGGGGCAGAAGGGGACTCTGCA...GGCTGATGGAGGGGAAGGAGTGAGCAGGGTAATGTATGTGAAAGAATAAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGCAGTGCTGTTGTATTGAGATGCGGTGGCAGCAGCTCTCCCCAGCAGGGAATGCTGTACTGGGTCTaGGTGTTACTCAGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FCSAVVLRCGGSSSPQQGMLYWV*VLLRRT Trigger: GGTCCTCCTGAGTAACACCCAGACCCAGTACAGCAT...TCCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAACAGCACTGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACCCAATGCTGTACTGGGTCTaGGTGTTACTCAGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LTPSPPSALPYFTLSCYPMLYWV*VLLRRT Trigger: GGTCCTCCTGAGTAACACCCAGACCCAGTACAGCAT...TGGGTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTCTTATTCTTTCACATACATTACCCTGCTCACTCCTTCCCCTCCATCAGGCCAGGCCACCCGGGTaGCTCGGTTGTCAATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLILSHTLPCSLLPLHQARPPG*LGCQLC Trigger: GCACAATTGACAACCGAGTCACCCGGGTGGCCTGGC...CTGATGGAGGGGAAGGAGTGAGCAGGGTAATGTATGTGAAAGAATAAGAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCTCCAGATTTCACACTTCATGACACACGCGACTGTCACACAGCCCACCCGGGACCAAATAGCATaGTGCTGGCGTTGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFLQISHFMTHATVTQPTRDQIA*CWRWCD Trigger: GTCACACCAACGCCAGCATCATGCTATTTGGTCCCG...GGTGGGCTGTGTGACAGTCGCGTGTGTCATGAAGTGTGAAATCTGGAGGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTCGGAATTTCATTTGCAGAGTCCCCTTCTaGCCCACGGGGACACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPPPSNFCLIGCDSRNFICRVPF*PTGTPV Trigger: CACAGGTGTCCCCGTGGGGCAGAAGGGGACTCTGCA...AATGAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTGGGAAAACTTGTACAATGAGGTaGACCCTGGAGGTCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAACGWVQARCAFFPLGKTCTMR*TLEVLG Trigger: CCCTAAGACCTCCAGGGTCCACCTCATTGTACAAGT...TTTCCCAAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACCAAAGCCAACGGCCTTaGGAGAAATATGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTPSPPSALPYFTLSCYQSQRP*EKYVSR Trigger: CCTGGAGACATATTTCTCCCAAGGCCGTTGGCTTTG...GTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTCGGAATTTCATTTTGTCAATTGTGCACCTaGGGGTGGCGCTCTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLPRISVSLAVILGISFCQLCT*GWRSPP Trigger: AGGGGGAGAGCGCCACCCTCAGGTGCACAATTGACA...AAATGAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACTGTGCCCTTAGCTTCTaGGATGTATGGTGGATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLTPSPPSALPYFTLSCYCALSF*DVWWIV Trigger: AACTATCCACCATACATCTCAGAAGCTAAGGGCACA...GTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | GCTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACCCTCATCCTTGAACCATTaGAATTCTGCTGAAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AHSFPSISPTLLHTLLLPSSLNH*NSAEGT Trigger: AGTCCCTTCAGCAGAATTTCAATGGTTCAAGGATGA...GGGTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | CAACAGAGAGGTCACACAGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCATCCTTGAACCATTaGAATTCTGCTGAAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QQRGHTVQLVGGSKLGVPSSLNH*NSAEGT Trigger: AGTCCCTTCAGCAGAATTTCAATGGTTCAAGGATGA...AGGCACACCTAGCTTGGACCCACCCACAAGCTGCACTGTGTGACCTCTCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCAGAGAGCCACACCTGGAAAGATGCTGCGCCTGGTATTAGTTATTGTTGAGATACTTGTACAATaGGGTGGACCCTGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRATPGKMLRLVLVIVEILVQ*GGPWRS Trigger: AGACCTCCAGGGTCCACCTCATTGTACAAGTATCTC...AACAATAACTAATACCAGGCGCAGCATCTTTCCAGGTGTGGCTCTCTGAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR TCA 90 bp | TCACACAGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTTCATCCTTGAACCATTaGAATTCTGCTGAAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SHSAACGWVQARCAFFPLSSLNH*NSAEGT Trigger: AGTCCCTTCAGCAGAATTTCAATGGTTCAAGGATGA...AAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACTGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| CDS-3UTR GCA 90 bp | TTCGTGGCACATCTAAGGCCCTTGTTTCTTGCTCTGTGCTTGTGTCTATGGACCCAGCCCCGTGAAGATTaGCCACGAGATAGAATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FVAHLRPLFLALCLCLWTQPRED*PRDRIV Trigger: CACAATTCTATCTCGTGGGCAATCTTCACGGGGCTG...GGTCCATAGACACAAGCACAGAGCAAGAAACAAGGGCCTTAGATGTGCCACGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR CCA 90 bp | CTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTCGGAATTTCCTGGAGGTCTTAGGGTaGTTGTCTGTCTGTACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCPPPSNFCLIGCDSRNFLEVLG*LSVCTE Trigger: CTCGGTACAGACAGACAACCACCCTAAGACCTCCAG...GAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTTATTCTTTCACATACATTACCCTGCTCACTCCTTCCCCTCCATCAGCGAGATACTTGTACAATaGGGTGGACCCTGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLFFHIHYPAHSFPSISEILVQ*GGPWRS Trigger: AGACCTCCAGGGTCCACCTCATTGTACAAGTATCTC...GCTGATGGAGGGGAAGGAGTGAGCAGGGTAATGTATGTGAAAGAATAAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTGGGAAAGTCTTTTGTCATCCTTaGACCATTGAAATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAACGWVQARCAFFPLGKVFCHP*TIEILL Trigger: CAGCAGAATTTCAATGGTTCAAGGATGACAAAAGAC...TTTCCCAAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTATTCTTTCACATACATTACCCTGCTCACTCCTTCCCCTCCATCAGCACTTGTACAATGAGGTaGACCCTGGAGGTCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLFFHIHYPAHSFPSISTCTMR*TLEVLG Trigger: CCCTAAGACCTCCAGGGTCCACCTCATTGTACAAGT...GCTGATGGAGGGGAAGGAGTGAGCAGGGTAATGTATGTGAAAGAATAAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
||
| CDS-3UTR TCA 90 bp | CTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTGCTGTTGTATGCCAGGCCACCCGGGTaGCTCGGTTGTCAATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGISFDSDLLLHFAVLLYARPPG*LGCQLC Trigger: GCACAATTGACAACCGAGTCACCCGGGTGGCCTGGC...ATACAACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR CCA 90 bp | CTTAATGGTATCTTTTGTGACTGTTGCTTGTGGGGTTATGGTGCTGTCAGGCTGCAAAGCCAACGGCCTTaGGAGAAATATGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNGIFCDCCLWGYGAVRLQSQRP*EKYVSR Trigger: CCTGGAGACATATTTCTCCCAAGGCCGTTGGCTTTG...CAGCCTGACAGCACCATAACCCCACAAGCAACAGTCACAAAAGATACCATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR TCA 90 bp | CTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTCGGAATTTCTGTGCCCTTAGCTTCTaGGATGTATGGTGGATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCPPPSNFCLIGCDSRNFCALSF*DVWWIV Trigger: AACTATCCACCATACATCTCAGAAGCTAAGGGCACA...GAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| CDS-3UTR TCA 90 bp | CTTTACCACAGTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTTGTGCCCTTAGCTTCTaGGATGTATGGTGGATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYHSMLCPPPSNFCLIGCCALSF*DVWWIV Trigger: AACTATCCACCATACATCTCAGAAGCTAAGGGCACA...ACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATACTGTGGTAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCAGAGAGCCACACCTGGAAAGATGCTGCGCCTGGTATTAGTTATTGTTCACGAGATAGAATTGTaGATTTTTGCCTGGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPQRATPGKMLRLVLVIVHEIEL*IFAWMV Trigger: AACCATCCAGGCAAAAATGCACAATTCTATCTCGTG...AACAATAACTAATACCAGGCGCAGCATCTTTCCAGGTGTGGCTCTCTGAGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR TCA 90 bp | CTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGATTCTCGGAATTTCGTCTTTTGTCATCCTTaGACCATTGAAATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCPPPSNFCLIGCDSRNFVFCHP*TIEILL Trigger: CAGCAGAATTTCAATGGTTCAAGGATGACAAAAGAC...GAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGGTGTGCCTTCTTCCCACTTGGGAAAAGAAAGAAAACTCAGCGGTACCGTCTTTTGTCATCCTTaGACCATTGAAATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLGVPSSHLGKERKLSGTVFCHP*TIEILL Trigger: CAGCAGAATTTCAATGGTTCAAGGATGACAAAAGAC...GGTACCGCTGAGTTTTCTTTCTTTTCCCAAGTGGGAAGAAGGCACACCTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| 3UTR CAA 72 bp | GTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATaGGCTGTGATTCTCGGAATTTCATTTGATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCFVPLPRISVS*AVILGISFDSD Trigger: GTCAGAATCAAATGAAATTCCGAGAATCACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
||
| 3UTR CAA 72 bp | GCAAGTGATTACTGTTGGTTTAGTTGTTTCAGTTGCTaGCTGTCCGTTAATGCCCCAAGGTGTGATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASDYCWFSCFSC*LSVNAPRCDGE Trigger: TTCTCCATCACACCTTGGGGCATTAACGGACAGCAAGCAACTGAAACAACTAAACCAACAGTAATCACTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
||
| CDS-3UTR TCA 90 bp | GTGATTCTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTGCTGGAGATACTTGTACAATaGGGTGGACCCTGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VILGISFDSDLLLHFAVLEILVQ*GGPWRS Trigger: AGACCTCCAGGGTCCACCTCATTGTACAAGTATCTC...CAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
||
| CDS-3UTR TCA 90 bp | TCTTATTCTTTCACATACATTACCCTGCTCACTCCTTCCCCTCCATCAGCCCTAGTCTTTTGTCATCCTTaGACCATTGAAATTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYSFTYITLLTPSPPSALVFCHP*TIEILL Trigger: CAGCAGAATTTCAATGGTTCAAGGATGACAAAAGAC...TAGGGCTGATGGAGGGGAAGGAGTGAGCAGGGTAATGTATGTGAAAGAATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
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| 3UTR CAA 72 bp | GTGGGGTTATGGTGCTGTCAGGCTGTCTTGTTTCGTTaGTTTGTTCTTTCTTTTCTCTTCTCTTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGLWCCQAVLFR*FVLSFLFSSLL Trigger: GAGAAGAGAAGAGAAGAGAAAAGAAAGAACAAACAAACGAAACAAGACAGCCTGACAGCACCATAACCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| CDS-3UTR TCA 90 bp | TTCTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTGCTGTTGTTGTGCCCTTAGCTTCTaGGATGTATGGTGGATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSEFHLILTCCFILQCCCCALSF*DVWWIV Trigger: AACTATCCACCATACATCTCAGAAGCTAAGGGCACA...ACAACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| CDS-3UTR TCA 90 bp | GAAGGAGCTGATTACACAATTACCGGTAAACTCTATCATCTTTTAGAAGATCAATCATCCTTGAACCATTaGAATTCTGCTGAAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EGADYTITGKLYHLLEDQSSLNH*NSAEGT Trigger: AGTCCCTTCAGCAGAATTTCAATGGTTCAAGGATGA...TTGATCTTCTAAAAGATGATAGAGTTTACCGGTAATTGTGTAATCAGCTCCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| CDS-3UTR GCA 90 bp | CTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTGCTGTTGTATGTAGTTTTCACTTCTTaGAACAAAGTTGAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGISFDSDLLLHFAVLLYVVFTS*NKVELV Trigger: TACAAGCTCAACTTTGTTGCAAGAAGTGAAAACTAC...ATACAACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155308.8 |
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| CDS-3UTR CAA 90 bp | AGGCCTCCTCCTCAGAGAGCCACACCTGGAAAGATGCTGCGCCTGGTATTAGTTACGCACCGGCACTCCTaGGAAGAGGCACAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPPQRATPGKMLRLVLVTHRHS*EEAQSR Trigger: GCGGCTCTGTGCCTCTTCCAAGGAGTGCCGGTGCGT...AACTAATACCAGGCGCAGCATCTTTCCAGGTGTGGCTCTCTGAGGAGGAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| CDS GCA 90 bp | TCTGCTGAAGGGACTGCGGAAGCTTCACACTGCAGAGTCCCCTTCTaGCCCACGGGGACACCTGTGCCCTTAGCTTCTGAGATGTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAEGTAEASHCRVPF*PTGTPVPLASEMYG Trigger: ACCATACATCTCAGAAGCTAAGGGCACAGGTGTCCCCGTGGGGCAGAAGGGGACTCTGCAGTGTGAAGCTTCCGCAGTCCCTTCAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS-3UTR CAA 90 bp | GTTGTATTGAGATGCGGTGGCAGCAGCTCTCCCCAGCAGGGAAGGGGCACTCACCTTGATGTCCCATTGTaGACCTCACTGACAGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VVLRCGGSSSPQQGRGTHLDVPL*TSLTAP Trigger: CGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAG...GTGAGTGCCCCTTCCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| CDS-3UTR CAA 90 bp | AGGCCTCCTCCTCAGAGAGCCACACCTGGAAAGATGCTGCGCCTGGTATTAGTTACCCGGGTGACTCGGTaGTCAATTGTGCACCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPPPQRATPGKMLRLVLVTRVTR*SIVHLR Trigger: CCTCAGGTGCACAATTGACAACCGAGTCACCCGGGT...AACTAATACCAGGCGCAGCATCTTTCCAGGTGTGGCTCTCTGAGGAGGAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| CDS-3UTR CAA 90 bp | CTGCTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACACCCGGGTGACTCGGTaGTCAATTGTGCACCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTPSPPSALPYFTLSCYTRVTR*SIVHLR Trigger: CCTCAGGTGCACAATTGACAACCGAGTCACCCGGGT...GTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
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| CDS-3UTR CAA 90 bp | GTTGTATTGAGATGCGGTGGCAGCAGCTCTCCCCAGCAGGGAAGGGGCACTCACGGTCTGTTTTCCACTTaGACTCCCTTCTTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VVLRCGGSSSPQQGRGTHGLFST*TPFFPS Trigger: CGAAGGAAAGAAGGGAGTCAAAGTGGAAAACAGACC...GTGAGTGCCCCTTCCCTGCTGGGGAGAGCTGCTGCCACCGCATCTCAATACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| CDS-3UTR CAA 90 bp | TTTCTTCCTCCAGATTTCACACTTCATGACACACGCGACTGTCACACAGCCCACCTTGATGTCCCATTGTaGACCTCACTGACAGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: FLPPDFTLHDTRDCHTAHLDVPL*TSLTAP Trigger: CGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAG...GTGGGCTGTGTGACAGTCGCGTGTGTCATGAAGTGTGAAATCTGGAGGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| CDS-3UTR CAA 90 bp | TCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACCCATCAAGTGAGGCTGATGTaGTTCCCTTCATTAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLPLHQPYPTSHSLATHQVRLM*FPSLME Trigger: CTCCATTAATGAAGGGAACAACATCAGCCTCACTTG...ATGGGTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
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| CDS-3UTR CAA 90 bp | CTTTACCACAGTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTGCCCACGAGATAGAATaGTGCATTTTTGCCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LYHSMLCPPPSNFCLIGCAHEIE*CIFAWM Trigger: CATCCAGGCAAAAATGCACAATTCTATCTCGTGGGC...ACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATACTGTGGTAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| CDS-3UTR CAA 90 bp | AGTGCAGCTTGTGGGTGGGTCCAAGCTAGGTGTGCCTTCTTCCCACTTGGGAAATCATGTTCAGAGACGTaGAAAAAGGTGAGTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAACGWVQARCAFFPLGKSCSET*KKVSFE Trigger: TTCAAAACTCACCTTTTTCAACGTCTCTGAACATGA...TTTCCCAAGTGGGAAGAAGGCACACCTAGCTTGGACCCACCCACAAGCTGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCACTCCTTCCCCTCCATCAGCCCTACCCTACTTCACACTCTCTTGCTACTCATGTTCAGAGACGTaGAAAAAGGTGAGTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLTPSPPSALPYFTLSCYSCSET*KKVSFE Trigger: TTCAAAACTCACCTTTTTCAACGTCTCTGAACATGA...GTAGCAAGAGAGTGTGAAGTAGGGTAGGGCTGATGGAGGGGAAGGAGTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
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| CDS-3UTR CAA 90 bp | CTTTACCACAGTATGCTTTGTCCCCCTCCCTCGAATTTCTGTCTCATTGGCTGTCAAGTGAGGCTGATGTaGTTCCCTTCATTAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYHSMLCPPPSNFCLIGCQVRLM*FPSLME Trigger: CTCCATTAATGAAGGGAACAACATCAGCCTCACTTG...ACAGCCAATGAGACAGAAATTCGAGGGAGGGGGACAAAGCATACTGTGGTAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| CDS-3UTR CAA 90 bp | TCTTATTCTTTCACATACATTACCCTGCTCACTCCTTCCCCTCCATCAGCCCTAGGTCTGTTTTCCACTTaGACTCCCTTCTTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SYSFTYITLLTPSPPSALGLFST*TPFFPS Trigger: CGAAGGAAAGAAGGGAGTCAAAGTGGAAAACAGACC...TAGGGCTGATGGAGGGGAAGGAGTGAGCAGGGTAATGTATGTGAAAGAATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115236.2 |
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| CDS-3UTR CAA 90 bp | GGTGTGCCTTCTTCCCACTTGGGAAAAGAAAGAAAACTCAGCGGTACCGAAATAGGTCTGTTTTCCACTTaGACTCCCTTCTTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GVPSSHLGKERKLSGTEIGLFST*TPFFPS Trigger: CGAAGGAAAGAAGGGAGTCAAAGTGGAAAACAGACC...TATTTCGGTACCGCTGAGTTTTCTTTCTTTTCCCAAGTGGGAAGAAGGCACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| CDS-3UTR CAA 90 bp | TTCTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTGCTGTTGTACCCGGGTGACTCGGTaGTCAATTGTGCACCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSEFHLILTCCFILQCCCTRVTR*SIVHLR Trigger: CCTCAGGTGCACAATTGACAACCGAGTCACCCGGGT...ACAACAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| CDS-3UTR CAA 90 bp | CTTAATGGTATCTTTTGTGACTGTTGCTTGTGGGGTTATGGTGCTGTCAGGCTGCAAGTGAGGCTGATGTaGTTCCCTTCATTAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNGIFCDCCLWGYGAVRLQVRLM*FPSLME Trigger: CTCCATTAATGAAGGGAACAACATCAGCCTCACTTG...CAGCCTGACAGCACCATAACCCCACAAGCAACAGTCACAAAAGATACCATTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| CDS-3UTR CAA 90 bp | GTGATTCTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTGCTGGGTCTGTTTTCCACTTaGACTCCCTTCTTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VILGISFDSDLLLHFAVLGLFST*TPFFPS Trigger: CGAAGGAAAGAAGGGAGTCAAAGTGGAAAACAGACC...CAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| CDS TCA 90 bp | TATGCAAGTGAGGCTGATGTTGTTCCCTTCATTAATGGAGATATCTaGAGAAATCTCTACAATTTTGGGAGATACTTGTACAATGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YASEADVVPFINGDI*RNLYNFGRYLYNEV Trigger: CACCTCATTGTACAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAACAACATCAGCCTCACTTGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 |
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| CDS-3UTR CAA 90 bp | GTGATTCTCGGAATTTCATTTGATTCTGACTTGTTGCTTCATTTTGCAGTGCTGTCATGTTCAGAGACGTaGAAAAAGGTGAGTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VILGISFDSDLLLHFAVLSCSET*KKVSFE Trigger: TTCAAAACTCACCTTTTTCAACGTCTCTGAACATGA...CAGCACTGCAAAATGAAGCAACAAGTCAGAATCAAATGAAATTCCGAGAATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 ENSMUST00000155308.8 |
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| CDS GCA 72 bp | GGGACTGCGGAAGCTTCACACTGCAGAGTCCCCTTCTaGCCCACGGGGACACCTGTGCCCTTAGCTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTAEASHCRVPF*PTGTPVPLASE Trigger: CTCAGAAGCTAAGGGCACAGGTGTCCCCGTGGGGCAGAAGGGGACTCTGCAGTGTGAAGCTTCCGCAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS CAA 90 bp | TTCACGGTGACCTTCACTCTTCGTACCACTGGTGCCGCCACGTCGTaGGAGGCGCTGCACTCGTACTCGCCTGACTGTTCCCGAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: FTVTFTLRTTGAATS*EALHSYSPDCSRVM Trigger: CATCACTCGGGAACAGTCAGGCGAGTACGAGTGCAGCGCCTCCAACGACGTGGCGGCACCAGTGGTACGAAGAGTGAAGGTCACCGTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS CAA 90 bp | AGAGGGAGGAGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATTGTaGACCTCACTGACAGCACCGGGACCTTTCCAAGGGGTCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGRSQMQPALLDVPL*TSLTAPGPFQGVRA Trigger: AGCCCTGACCCCTTGGAAAGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCTCCTCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS CAA 90 bp | AGAAGAGGGAGGAGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATaGTTGACCTCACTGACAGCACCGGGACCTTTCCAAGGGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRGRSQMQPALLDVP*LTSLTAPGPFQGVR Trigger: CCTGACCCCTTGGAAAGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCTCCTCCCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS CAA 90 bp | AGAGGGAGGAGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATTGTaGACCTCACTGACAGCACCGGGACCAAATAGCATGATGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RGRSQMQPALLDVPL*TSLTAPGPNSMMLA Trigger: CGCCAGCATCATGCTATTTGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCTCCTCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| CDS CAA 72 bp | AGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATTGTaGACCTCACTGACAGCACCGGGACCTTTCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQMQPALLDVPL*TSLTAPGPFQG Trigger: CCCTTGGAAAGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS TCA 72 bp | CTTCTGCCCCACGGGGACACCTGTGCCCTTAGCTTCTaGGATGTATGGTGGATAGTTCACGGTGACCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLPHGDTCALSF*DVWWIVHGDLH Trigger: GTGAAGGTCACCGTGAACTATCCACCATACATCTCAGAAGCTAAGGGCACAGGTGTCCCCGTGGGGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS CAA 72 bp | AGGAGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATaGTTGACCTCACTGACAGCACCGGGACCAAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSQMQPALLDVP*LTSLTAPGPNS Trigger: GCTATTTGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| CDS CAA 72 bp | AGGAGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATaGTTGACCTCACTGACAGCACCGGGACCTTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSQMQPALLDVP*LTSLTAPGPFQ Trigger: TTGGAAAGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140118.8 ENSMUST00000155308.8 |
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| CDS CAA 90 bp | AGAAGAGGGAGGAGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATaGTTGACCTCACTGACAGCACCGGGACCAAATAGCATGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRGRSQMQPALLDVP*LTSLTAPGPNSMML Trigger: CAGCATCATGCTATTTGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCTCCTCCCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| CDS CAA 72 bp | AGCCAAATGCAGCCTGCCCTCCTTGATGTCCCATTGTaGACCTCACTGACAGCACCGGGACCAAATAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQMQPALLDVPL*TSLTAPGPNSM Trigger: CATGCTATTTGGTCCCGGTGCTGTCAGTGAGGTCAACAATGGGACATCAAGGAGGGCAGGCTGCATTTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075069.11 ENSMUST00000115237.8 |
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| CDS GCA 72 bp | TTGGAAGAGGCACAGAGCCGCCAGCCCCGTGAAGATTaGCCACGAGATAGAATTGTGCATTTTTGCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LEEAQSRQPRED*PRDRIVHFCLD Trigger: ATCCAGGCAAAAATGCACAATTCTATCTCGTGGGCAATCTTCACGGGGCTGGCGGCTCTGTGCCTCTTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075069.11 |
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| CDS CAA 72 bp | TCCGGTCTACCTGTGGCTATGCAAGTGAGGCTGATGTaGTTCCCTTCATTAATGGAGATATCTGAAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: SGLPVAMQVRLM*FPSLMEISEEI Trigger: GATTTCTTCAGATATCTCCATTAATGAAGGGAACAACATCAGCCTCACTTGCATAGCCACAGGTAGACCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 |
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| CDS CAA 90 bp | ACTGTAGGCTCCGGTCTACCTGTGGCTATGCAAGTGAGGCTGATGTaGTTCCCTTCATTAATGGAGATATCTGAAGAAATCTCTACAATT | + |
|
Preference number: 6 (lower is better) Translates to: TVGSGLPVAMQVRLM*FPSLMEISEEISTI Trigger: AATTGTAGAGATTTCTTCAGATATCTCCATTAATGAAGGGAACAACATCAGCCTCACTTGCATAGCCACAGGTAGACCGGAGCCTACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 |
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| CDS CAA 72 bp | TCATTAATGGAGATATCTGAAGAAATCTCTACAATTTaGGGAGATACTTGTACAATGAGGTGGACCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLMEISEEISTI*GDTCTMRWTLE Trigger: CTCCAGGGTCCACCTCATTGTACAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075069.11 ENSMUST00000115236.2 ENSMUST00000115237.8 |
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