RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NTF5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074121

Ensembl transcript IDs: ENSMUST00000058879.8

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTACCTGCCTGTACCTACAGATGAGTACCACCGTGCATGGTTTATaGTGTTCAGGATGGAGCCCAGGACTGTGTGCGTGCCAGGCAACC +
Preference number: 1 (lower is better)
Translates to: STCLYLQMSTTVHGL*CSGWSPGLCACQAT
Trigger: GGTTGCCTGGCACGCACACAGTCCTGGGCTCCATCCTGAACATCATAAACCATGCACGGTGGTACTCATCTGTAGGTACAGGCAGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CCA 90 bp TGCTCAAAGCAGGATGCTGTATTCCTAGGCAACGCTTGTGCACTTTaGCCAGGTGGGACTTGTCTGGTGAACCTAGCTTTCCCTGATCCC +
Preference number: 1 (lower is better)
Translates to: CSKQDAVFLGNACAL*PGGTCLVNLAFPDP
Trigger: GGGATCAGGGAAAGCTAGGTTCACCAGACAAGTCCCACCTGGCCAAAGTGCACAAGCGTTGCCTAGGAATACAGCATCCTGCTTTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CCA 90 bp CCATACATTCCACACAGACTGAGATTTGAGAGAGATTTGATTCTTTaGTTATTCCAGTTCCCAGTCATAAGGCACGGTAGAGCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: PYIPHRLRFERDLIL*LFQFPVIRHGRAAR
Trigger: CCTGGCTGCTCTACCGTGCCTTATGACTGGGAACTGGAATAACCAAAGAATCAAATCTCTCTCAAATCTCAGTCTGTGTGGAATGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CCA 90 bp CTTTCCTCGTCCGTTTTGATGAGCCAGGGTCCTCTGATGTTAAAATaGTTGCCAAAGTCATATATCAGGTCTGATAAACAGGAGATAGTA +
Preference number: 1 (lower is better)
Translates to: LSSSVLMSQGPLMLK*LPKSYIRSDKQEIV
Trigger: TACTATCTCCTGTTTATCAGACCTGATATATGACTTTGGCAACCATTTTAACATCAGAGGACCCTGGCTCATCAAAACGGACGAGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR CCA 90 bp ATTCCTAGGCAACGCTTGTGCACTTTGGCCAGGTGGGACTTGTCTGGTGAACCTGCCAGGCCACCCCTGTaGTCCTTTCAGCATCCAGCT +
Preference number: 2 (lower is better)
Translates to: IPRQRLCTLARWDLSGEPARPPL*SFQHPA
Trigger: AGCTGGATGCTGAAAGGACCACAGGGGTGGCCTGGC...AGGTTCACCAGACAAGTCCCACCTGGCCAAAGTGCACAAGCGTTGCCTAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR GCA 90 bp AAAGTCCACCCTCCAATGAGCTGCATGAGGAGACTCTGTCTCCAAATCAGAGCTGAGCCCAGGACTGTGTaGGTGCCAGGCAACCAGAAA +
Preference number: 2 (lower is better)
Translates to: KVHPPMSCMRRLCLQIRAEPRTV*VPGNQK
Trigger: TTTCTGGTTGCCTGGCACGCACACAGTCCTGGGCTC...AGCTCTGATTTGGAGACAGAGTCTCCTCATGCAGCTCATTGGAGGGTGGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR GCA 90 bp GGGTGGTCGGGTTCACTGCTCAAAGCAGGATGCTGTATTCCTAGGCAACGCTTGTGCATCCCCTTTTCATaGGTTCTTTCCTCGTCCGTT +
Preference number: 2 (lower is better)
Translates to: GWSGSLLKAGCCIPRQRLCIPFS*VLSSSV
Trigger: AACGGACGAGGAAAGAACGCATGAAAAGGGGATGCA...CAAGCGTTGCCTAGGAATACAGCATCCTGCTTTGAGCAGTGAACCCGACCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR CCA 90 bp CCTAGCTCCAGCGCATGCATCATGCATCCCCTTTTCATGCGTTCTTTCCTCGTCTGTTTTCCCTCAACTTaGGCAGTTCCCAAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: PSSSACIMHPLFMRSFLVCFPST*AVPKPG
Trigger: TCCAGGCTTGGGAACTGCCCAAGTTGAGGGAAAACA...GACGAGGAAAGAACGCATGAAAAGGGGATGCATGATGCATGCGCTGGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR CCA 90 bp TGGAGCCCAGGACTGTGTGCGTGCCAGGCAACCAGAAACAGCCTACTGATGGAGAGAGATTTGATTCTTTaGTTATTCCAGTTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: WSPGLCACQATRNSLLMERDLIL*LFQFPV
Trigger: GACTGGGAACTGGAATAACCAAAGAATCAAATCTCT...CTCCATCAGTAGGCTGTTTCTGGTTGCCTGGCACGCACACAGTCCTGGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR TCA 90 bp CCCATCCTTAAGGTTCCAGGGCCAGCTGCTTCCATTGTTTTCCCATCTGACCCACTCCTATTCATCACTTaGAACCTCATTTGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: PILKVPGPAASIVFPSDPLLFIT*NLIWFH
Trigger: GTGAAACCAAATGAGGTTTCAAGTGATGAATAGGAG...TGGGTCAGATGGGAAAACAATGGAAGCAGCTGGCCCTGGAACCTTAAGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CAA 90 bp TCCTCGTCCGTTTTGATGAGCCAGGGTCCTCTGATGTTAAAATGGTaGCCAAAGTCATATATCAGGTCTGATAAACAGGAGATAGTAAAC +
Preference number: 2 (lower is better)
Translates to: SSSVLMSQGPLMLKW*PKSYIRSDKQEIVN
Trigger: GTTTACTATCTCCTGTTTATCAGACCTGATATATGACTTTGGCAACCATTTTAACATCAGAGGACCCTGGCTCATCAAAACGGACGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR TCA 72 bp GACTGTGTGCGTGCCAGGCAACCAGAAACAGCCTACTaGTGGAGGCCTAGCTCCAGCGCATGCATCATGCAT +
Preference number: 3 (lower is better)
Translates to: DCVRARQPETAY*WRPSSSACIMH
Trigger: ATGCATGATGCATGCGCTGGAGCTAGGCCTCCATCAGTAGGCTGTTTCTGGTTGCCTGGCACGCACACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR GCA 72 bp AGACTAGGGTCATGTTGGATGGGAGGTATCCATGCTTaGTTGCACTCCCTGGGTGGTCGGGTTCACTGCTCA +
Preference number: 3 (lower is better)
Translates to: RLGSCWMGGIHA*LHSLGGRVHCS
Trigger: TGAGCAGTGAACCCGACCACCCAGGGAGTGCAAGCAAGCATGGATACCTCCCATCCAACATGACCCTAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR GCA 72 bp CCTACTGATGGAGGCCTAGCTCCAGCGCATGCATCATaGATCCCCTTTTCATGCGTTCTTTCCTCGTCCGTT +
Preference number: 3 (lower is better)
Translates to: PTDGGLAPAHAS*IPFSCVLSSSV
Trigger: AACGGACGAGGAAAGAACGCATGAAAAGGGGATGCATGATGCATGCGCTGGAGCTAGGCCTCCATCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR TCA 72 bp CTGTACCTACAGATGAGTACCACCGTGCATGGTTTATaGTGTTCAGGATGGAGCCCAGGACTGTGTGCGTGC +
Preference number: 3 (lower is better)
Translates to: LYLQMSTTVHGL*CSGWSPGLCAC
Trigger: GCACGCACACAGTCCTGGGCTCCATCCTGAACATCATAAACCATGCACGGTGGTACTCATCTGTAGGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR GCA 72 bp TGGTTTATGATGTTCAGGATGGAGCCCAGGACTGTGTaGGTGCCAGGCAACCAGAAACAGCCTACTGATGGA +
Preference number: 3 (lower is better)
Translates to: WFMMFRMEPRTV*VPGNQKQPTDG
Trigger: TCCATCAGTAGGCTGTTTCTGGTTGCCTGGCACGCACACAGTCCTGGGCTCCATCCTGAACATCATAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR GCA 72 bp CTCAAAGCAGGATGCTGTATTCCTAGGCAACGCTTGTaGACTTTGGCCAGGTGGGACTTGTCTGGTGAACCT +
Preference number: 3 (lower is better)
Translates to: LKAGCCIPRQRL*TLARWDLSGEP
Trigger: AGGTTCACCAGACAAGTCCCACCTGGCCAAAGTGCACAAGCGTTGCCTAGGAATACAGCATCCTGCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CCA 72 bp CAGGATGCTGTATTCCTAGGCAACGCTTGTGCACTTTaGCCAGGTGGGACTTGTCTGGTGAACCTAGCTTTC +
Preference number: 3 (lower is better)
Translates to: QDAVFLGNACAL*PGGTCLVNLAF
Trigger: GAAAGCTAGGTTCACCAGACAAGTCCCACCTGGCCAAAGTGCACAAGCGTTGCCTAGGAATACAGCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR CAA 90 bp AAAGTCCACCCTCCAATGAGCTGCATGAGGAGACTCTGTCTCCAAATCAGAGCTCTTTCCTCGTCCGTTTaGATGAGCCAGGGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: KVHPPMSCMRRLCLQIRALSSSV*MSQGPL
Trigger: CAGAGGACCCTGGCTCATCAAAACGGACGAGGAAAG...AGCTCTGATTTGGAGACAGAGTCTCCTCATGCAGCTCATTGGAGGGTGGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR GCA 72 bp CCCAGGCTGCCCTGGACCTCCAGGCAATCTTCTGTCTaGAGCCTTTTAAGCATTAGGATTACAGTACATACC +
Preference number: 3 (lower is better)
Translates to: PRLPWTSRQSSV*SLLSIRITVHT
Trigger: GGTATGTACTGTAATCCTAATGCTTAAAAGGCTGCAGACAGAAGATTGCCTGGAGGTCCAGGGCAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR CAA 90 bp TGGAGCCCAGGACTGTGTGCGTGCCAGGCAACCAGAAACAGCCTACTGATGGAGCTGATGTTAAAATGGTaGCCAAAGTCATATATCAGG +
Preference number: 3 (lower is better)
Translates to: WSPGLCACQATRNSLLMELMLKW*PKSYIR
Trigger: CCTGATATATGACTTTGGCAACCATTTTAACATCAG...CTCCATCAGTAGGCTGTTTCTGGTTGCCTGGCACGCACACAGTCCTGGGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CCA 72 bp CCACACAGACTGAGATTTGAGAGAGATTTGATTCTTTaGTTATTCCAGTTCCCAGTCATAAGGCACGGTAGA +
Preference number: 3 (lower is better)
Translates to: PHRLRFERDLIL*LFQFPVIRHGR
Trigger: TCTACCGTGCCTTATGACTGGGAACTGGAATAACCAAAGAATCAAATCTCTCTCAAATCTCAGTCTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CCA 72 bp TCCGTTTTGATGAGCCAGGGTCCTCTGATGTTAAAATaGTTGCCAAAGTCATATATCAGGTCTGATAAACAG +
Preference number: 3 (lower is better)
Translates to: SVLMSQGPLMLK*LPKSYIRSDKQ
Trigger: CTGTTTATCAGACCTGATATATGACTTTGGCAACCATTTTAACATCAGAGGACCCTGGCTCATCAAAACGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR-3UTR CAA 90 bp TCCAGGCAATCTTCTGTCTGCAGCCTTTTAAGCATTAGGATTACAGTACATACCCACTTGAAACCTCATTaGGTTTCACCATACATTCCA +
Preference number: 3 (lower is better)
Translates to: SRQSSVCSLLSIRITVHTHLKPH*VSPYIP
Trigger: TGGAATGTATGGTGAAACCAAATGAGGTTTCAAGTG...GGTATGTACTGTAATCCTAATGCTTAAAAGGCTGCAGACAGAAGATTGCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR TCA 90 bp CCCATCCTTAAGGTTCCAGGGCCAGCTGCTTCCATTGTTTTCCCATCTGACCCACTCGGCCTGTTCGGCTaGGGAGCGTGCAGACGCAAG +
Preference number: 4 (lower is better)
Translates to: PILKVPGPAASIVFPSDPLGLFG*GACRRK
Trigger: CTTGCGTCTGCACGCTCCTCAGCCGAACAGGCCGAG...TGGGTCAGATGGGAAAACAATGGAAGCAGCTGGCCCTGGAACCTTAAGGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR CCA 90 bp GGGTGGTCGGGTTCACTGCTCAAAGCAGGATGCTGTATTCCTAGGCAACGCTTGCTCAGGGGCCAGAAATaGGGGCAGGGTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: GWSGSLLKAGCCIPRQRLLRGQK*GQGGGW
Trigger: CCATCCTCCACCCTGCCCCCATTTCTGGCCCCTGAG...CAAGCGTTGCCTAGGAATACAGCATCCTGCTTTGAGCAGTGAACCCGACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR CCA 90 bp TGCTGTATTCCTAGGCAACGCTTGTGCACTTTGGCCAGGTGGGACTTGTCTGGTCAGCCTACGCGGCCCTaGGAGTCTGCAGTCAACGCC +
Preference number: 4 (lower is better)
Translates to: CCIPRQRLCTLARWDLSGQPTRP*ESAVNA
Trigger: GGCGTTGACTGCAGACTCCCAGGGCCGCGTAGGCTG...ACCAGACAAGTCCCACCTGGCCAAAGTGCACAAGCGTTGCCTAGGAATACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CAA 72 bp ATCCCATCCTTAAGGTTCCAGGGCCAGCTGCTTCCATaGTTTTCCCATCTGACCCATTTGCCCTCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IPSLRFQGQLLP*FSHLTHLPSPQ
Trigger: CTGGGGCGAGGGCAAATGGGTCAGATGGGAAAACAATGGAAGCAGCTGGCCCTGGAACCTTAAGGATGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CAA 72 bp CTAGGGTCATGTTGGATGGGAGGTATCCATGCTTGCTaGCACTCCCTGGGTGGTCGGGTTCACTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LGSCWMGGIHAC*HSLGGRVHCSK
Trigger: CTTTGAGCAGTGAACCCGACCACCCAGGGAGTGCAAGCAAGCATGGATACCTCCCATCCAACATGACCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CAA 72 bp AAGACTAGGGTCATGTTGGATGGGAGGTATCCATGCTaGCTTGCACTCCCTGGGTGGTCGGGTTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: KTRVMLDGRYPC*LALPGWSGSLL
Trigger: GAGCAGTGAACCCGACCACCCAGGGAGTGCAAGCAAGCATGGATACCTCCCATCCAACATGACCCTAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR GCA 90 bp AGCATTAGGATTACAGTACATACCACAACACCCAGTCCCAGGCCTTTTATTTTACCGGCGGCTTGCGGGTaGGGTCTCACTCACCCCGCG +
Preference number: 4 (lower is better)
Translates to: SIRITVHTTTPSPRPFILPAACG*GLTHPA
Trigger: CGCGGGGTGAGTGAGACCGCACCCGCAAGCCGCCGG...TAAAATAAAAGGCCTGGGACTGGGTGTTGTGGTATGTACTGTAATCCTAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR TCA 90 bp AAAGTCCACCCTCCAATGAGCTGCATGAGGAGACTCTGTCTCCAAATCAGAGCTCTTAGCCTTGCATTCTaGGAGCCAGTGCCTCCGATC +
Preference number: 4 (lower is better)
Translates to: KVHPPMSCMRRLCLQIRALSLAF*EPVPPI
Trigger: GATCGGAGGCACTGGCTCTCAGAATGCAAGGCTAAG...AGCTCTGATTTGGAGACAGAGTCTCCTCATGCAGCTCATTGGAGGGTGGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR TCA 90 bp TCCAGGCAATCTTCTGTCTGCAGCCTTTTAAGCATTAGGATTACAGTACATACCGTCTCGAAGAAGTACTaGCGCAGGGGACTGCCACCT +
Preference number: 4 (lower is better)
Translates to: SRQSSVCSLLSIRITVHTVSKKY*RRGLPP
Trigger: AGGTGGCAGTCCCCTGCGTCAGTACTTCTTCGAGAC...GGTATGTACTGTAATCCTAATGCTTAAAAGGCTGCAGACAGAAGATTGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR GCA 90 bp TTAAGCATTAGGATTACAGTACATACCACAACACCCAGTCCCAGGCCTTTTATTCACCCAGCCACTCACTaGGTCGCATACTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSIRITVHTTTPSPRPFIHPATH*VAYCQL
Trigger: GAGCTGGCAGTATGCGACGCAGTGAGTGGCTGGGTG...AATAAAAGGCCTGGGACTGGGTGTTGTGGTATGTACTGTAATCCTAATGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
CDS-3UTR CCA 90 bp TCCAGGCAATCTTCTGTCTGCAGCCTTTTAAGCATTAGGATTACAGTACATACCGCTCCATGGGGACGCTaGGGAGGAGGAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SRQSSVCSLLSIRITVHTAPWGR*GGGRGK
Trigger: TTTTCCTCTTCCTCCTCCCCAGCGTCCCCATGGAGC...GGTATGTACTGTAATCCTAATGCTTAAAAGGCTGCAGACAGAAGATTGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CAA 72 bp TCCGGGAGAACTCCTATTCATCACTTGAAACCTCATTaGGTTTCACCATACATTCCACACAGACTGAGATTT +
Preference number: 4 (lower is better)
Translates to: SGRTPIHHLKPH*VSPYIPHRLRF
Trigger: AAATCTCAGTCTGTGTGGAATGTATGGTGAAACCAAATGAGGTTTCAAGTGATGAATAGGAGTTCTCCCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CAA 72 bp GTTTTGATGAGCCAGGGTCCTCTGATGTTAAAATGGTaGCCAAAGTCATATATCAGGTCTGATAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: VLMSQGPLMLKW*PKSYIRSDKQE
Trigger: CTCCTGTTTATCAGACCTGATATATGACTTTGGCAACCATTTTAACATCAGAGGACCCTGGCTCATCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8
3UTR CAA 72 bp CCATACATTCCACACAGACTGAGATTTGAGAGAGATTaGATTCTTTGGTTATTCCAGTTCCCAGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: PYIPHRLRFERD*ILWLFQFPVIR
Trigger: CCTTATGACTGGGAACTGGAATAACCAAAGAATCAAATCTCTCTCAAATCTCAGTCTGTGTGGAATGTATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058879.8