Pregenerated sensors for NTF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049107Ensembl transcript IDs: ENSMUST00000050484.9, ENSMUST00000112244.8, ENSMUST00000204542.3
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGAAACCACAGTCATGGCCTTGACAATACTGAATGCCAAATACTaGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCAC | + |
|
Preference number: 1 (lower is better) Translates to: TETTVMALTILNAKY*CTQVLQKGSREPNH Trigger: GTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATTGTCAAGGCCATGACTGTGGTTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| 3UTR CCA 72 bp | TTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATaGGAAAGGCCTGAGGGAAGGCAAGCACACGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: FPRAQSQNKVNR*ERPEGRQAHEF Trigger: AAATTCGTGTGCTTGCCTTCCCTCAGGCCTTTCCCATCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| 3UTR CCA 72 bp | ACAGTCATGGCCTTGACAATACTGAATGCCAAATACTaGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TVMALTILNAKY*CTQVLQKGSRE Trigger: CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATTGTCAAGGCCATGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | GCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACCTCTGGTTCCCTGGGTaGCTCTGCTTTGGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKYWCTQVLQKGSREPNHLWFPG*LCFGQG Trigger: ACCCTGCCCAAAGCAGAGGCACCCAGGGAACCAGAG...GTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACCTGGTGGCCTCTCCCTaGTCTGGTTCCCTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNLVASP*SGSLGA Trigger: GGCACCCAGGGAACCAGAGCAGGGAGAGGCCACCAG...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCGGGGCTCCAAAGGGGTaGTGTCACTCAGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: MPNTGVHRFYRRVPESPIGAPKG*CHSAGP Trigger: GGGTCCTGCTGAGTGACAGCACCCCTTTGGAGCCCC...GATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCCTCTGGTTCCCTGGGTaGCTCTGCTTTGGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MPNTGVHRFYRRVPESPILWFPG*LCFGQG Trigger: ACCCTGCCCAAAGCAGAGGCACCCAGGGAACCAGAG...GATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | CAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATCTGGTGGCCTCTCCCTaGTCTGGTTCCCTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVLQKGSREPNHKTRLTDLVASP*SGSLGA Trigger: GGCACCCAGGGAACCAGAGCAGGGAGAGGCCACCAG...ATCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACACTGGTGGCCTCTCCCTaGTCTGGTTCCCTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQVLQKGSREPNHKTRLTLVASP*SGSLGA Trigger: GGCACCCAGGGAACCAGAGCAGGGAGAGGCCACCAG...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCCCTGCTCTGGTTCCCTaGGTGCCTCTGCTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MPNTGVHRFYRRVPESPIPALVP*VPLLWA Trigger: TGCCCAAAGCAGAGGCACCCAGGGAACCAGAGCAGG...GATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACTCTCCCCCAGCACTGTaGCCTGGTGTCCCCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNSPPAL*PGVPEC Trigger: ACATTCGGGGACACCAGGTCACAGTGCTGGGGGAGA...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | GCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACCCCTGCAACCGTTTTTaGCCGGCCTGGCTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AKYWCTQVLQKGSREPNHPCNRF*PAWLLY Trigger: GTAAAGAAGCCAGGCCGGTCAAAAACGGTTGCAGGG...GTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACGGGGCTCCAAAGGGGTaGTGTCACTCAGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNGAPKG*CHSAGP Trigger: GGGTCCTGCTGAGTGACAGCACCCCTTTGGAGCCCC...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | GCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACCCCAGCACTGTGACCTaGTGTCCCCGAATGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AKYWCTQVLQKGSREPNHPSTVT*CPRMSM Trigger: CATTGACATTCGGGGACACCAGGTCACAGTGCTGGG...GTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCATTGGCTGGAACTCTaGCCTGGTGGCCTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILNAKYWCTQVLQKGSREHWLEL*PGGLSL Trigger: CAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATG...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | CAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATCATTGGCTGGAACTCTaGCCTGGTGGCCTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLQKGSREPNHKTRLTDHWLEL*PGGLSL Trigger: CAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATG...ATCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGACATTGGCTGGAACTCTaGCCTGGTGGCCTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRHWLEL*PGGLSL Trigger: CAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATG...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCCCGAATGTCAATGGCTaGGGACTTGTCGGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: MPNTGVHRFYRRVPESPIPNVNG*GLVGHP Trigger: TGGGTGACCGACAAGTCCTCAGCCATTGACATTCGG...GATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACATCTCCCCCAGCACTGTaGCCTGGTGTCCCCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TQVLQKGSREPNHKTRLTSPPAL*PGVPEC Trigger: ACATTCGGGGACACCAGGTCACAGTGCTGGGGGAGA...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGGGGCTCCAAAGGGGTaGTGTCACTCAGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: NTECQILVYTGFTEGFPRGAPKG*CHSAGP Trigger: GGGTCCTGCTGAGTGACAGCACCCCTTTGGAGCCCC...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | AATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACCTGCTCTGGTTCCCTaGGTGCCTCTGCTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTGVHRFYRRVPESPITKPALVP*VPLLWA Trigger: TGCCCAAAGCAGAGGCACCCAGGGAACCAGAGCAGG...TTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACACCTGCTCTGGTTCCCTaGGTGCCTCTGCTTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQVLQKGSREPNHKTRLTPALVP*VPLLWA Trigger: TGCCCAAAGCAGAGGCACCCAGGGAACCAGAGCAGG...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACGGAACTCTGACCTGGTaGCCTCTCCCTGCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNGTLTW*PLPALV Trigger: AACCAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCC...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGCTGGAACTCTGACCTaGTGGCCTCTCCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQVLQKGSREPNHKTRLTAGTLT*WPLPAL Trigger: CAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCCAGC...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | GCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACGTCCCCGAATGTCAATaGCTGAGGACTTGTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKYWCTQVLQKGSREPNHVPECQ*LRTCRS Trigger: TGACCGACAAGTCCTCAGCCATTGACATTCGGGGAC...GTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ACAATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGACTCTGGTTCCCTGGGTaGCTCTGCTTTGGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TILNAKYWCTQVLQKGSRLWFPG*LCFGQG Trigger: ACCCTGCCCAAAGCAGAGGCACCCAGGGAACCAGAG...TCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGAGGAACTCTGACCTGGTaGCCTCTCCCTGCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRGTLTW*PLPALV Trigger: AACCAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCC...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | AATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAAGGAACTCTGACCTGGTaGCCTCTCCCTGCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTGVHRFYRRVPESPITKGTLTW*PLPALV Trigger: AACCAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCC...TTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCTGGAACTCTGACCTaGTGGCCTCTCCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTECQILVYTGFTEGFPRAGTLT*WPLPAL Trigger: CAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCCAGC...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCGAATGTCAATGGCTaGGGACTTGTCGGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILNAKYWCTQVLQKGSREPNVNG*GLVGHP Trigger: TGGGTGACCGACAAGTCCTCAGCCATTGACATTCGG...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACACCGAATGTCAATGGCTaGGGACTTGTCGGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQVLQKGSREPNHKTRLTPNVNG*GLVGHP Trigger: TGGGTGACCGACAAGTCCTCAGCCATTGACATTCGG...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACCCCTGCAACCGTTTTTaGCCGGCCTGGCTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNPCNRF*PAWLLY Trigger: GTAAAGAAGCCAGGCCGGTCAAAAACGGTTGCAGGG...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | GCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAACTCCTTTGATCCATaGTGTTGCCTTGGATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKYWCTQVLQKGSREPNHNSFDP*CCLGCH Trigger: GTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTT...GTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACGTCCCCGAATGTCAATaGCTGAGGACTTGTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNVPECQ*LRTCRS Trigger: TGACCGACAAGTCCTCAGCCATTGACATTCGGGGAC...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACCCCAGCACTGTGACCTaGTGTCCCCGAATGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNPSTVT*CPRMSM Trigger: CATTGACATTCGGGGACACCAGGTCACAGTGCTGGG...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACCTCACTGTCACACACTaGGTACTCTCCTCGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNLTVTH*VLSSVT Trigger: AGTCACCGAGGAGAGTACTCAGTGTGTGACAGTGAG...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACACTCACTGTCACACACTaGGTACTCTCCTCGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TQVLQKGSREPNHKTRLTLTVTH*VLSSVT Trigger: AGTCACCGAGGAGAGTACTCAGTGTGTGACAGTGAG...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGACCCTGCAACCGTTTTTaGCCGGCCTGGCTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NTECQILVYTGFTEGFPRPCNRF*PAWLLY Trigger: GTAAAGAAGCCAGGCCGGTCAAAAACGGTTGCAGGG...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATGTCCCCGAATGTCAATaGCTGAGGACTTGTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVLQKGSREPNHKTRLTDVPECQ*LRTCRS Trigger: TGACCGACAAGTCCTCAGCCATTGACATTCGGGGAC...ATCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATGCTGTTGCCTTGGATaGCACGGAGATAAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRCCCLG*HGDKQE Trigger: TTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCA...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACTGCTGTTGCCTTGGATaGCACGGAGATAAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNCCCLG*HGDKQE Trigger: TTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCA...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACTTTGATCCATGCTGTTaGCTTGGATGCCACGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNFDPCC*LGCHGD Trigger: ATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAA...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | CAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATAACTCCTTTGATCCATaGTGTTGCCTTGGATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLQKGSREPNHKTRLTDNSFDP*CCLGCH Trigger: GTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTT...ATCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGAACTCCTTTGATCCATaGTGTTGCCTTGGATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNAKYWCTQVLQKGSRENSFDP*CCLGCH Trigger: GTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTT...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATGCGAAGTTTTGCACTaGGAGTTCCAGTGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRCEVLH*EFQCLS Trigger: TGACAAACACTGGAACTCTCAGTGCAAAACTTCGCA...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGATGCTGTTGCCTTGGATaGCACGGAGATAAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTECQILVYTGFTEGFPRCCCLG*HGDKQE Trigger: TTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCA...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGATTTGATCCATGCTGTTaGCTTGGATGCCACGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTECQILVYTGFTEGFPRFDPCC*LGCHGD Trigger: ATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAA...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAGGTTTGCGAAGTTTTaGACTGAGAGTTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNRFAKF*TESSSV Trigger: AACACTGGAACTCTCAGTGCAAAACTTCGCAAACCT...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGATGCGAAGTTTTGCACTaGGAGTTCCAGTGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTECQILVYTGFTEGFPRCEVLH*EFQCLS Trigger: TGACAAACACTGGAACTCTCAGTGCAAAACTTCGCA...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGGAGTTTGTTGTTTTCTaGAGTCAGTGCTCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: ILNAKYWCTQVLQKGSREEFVVF*SQCSDI Trigger: TATGTCCGAGCACTGACTTCAGAAAACAACAAACTC...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR TCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACGAGTTTGTTGTTTTCTaGAGTCAGTGCTCGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNEFVVF*SQCSDI Trigger: TATGTCCGAGCACTGACTTCAGAAAACAACAAACTC...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR GCA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGGTTTGCGAAGTTTTaGACTGAGAGTTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNRFAKF*TESSSV Trigger: AACACTGGAACTCTCAGTGCAAAACTTCGCAAACCT...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGACATCCACCATCTGTTTaGAAAGCTTGTTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRHPPSV*KACFSR Trigger: TCTTGAAAAACAAGCTTTCCAAACAGATGGTGGATG...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCATCCACCATCTGTTTaGAAAGCTTGTTTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILNAKYWCTQVLQKGSREHPPSV*KACFSR Trigger: TCTTGAAAAACAAGCTTTCCAAACAGATGGTGGATG...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATTCACATAAAACAAGATaGACATCACCTTGTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLQKGSREPNHKTRLTDSHKTR*TSPCSP Trigger: AGGTGAACAAGGTGATGTCCATCTTGTTTTATGTGA...ATCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CCA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGTCACATAAAACAAGATaGACATCACCTTGTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILNAKYWCTQVLQKGSRESHKTR*TSPCSP Trigger: AGGTGAACAAGGTGATGTCCATCTTGTTTTATGTGA...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CCA 90 bp | GTAGCTCTGTGTCCGTTGCAATCATTGGCTGGAACTCTGACCTGGTaGCCTCTCCCTGCTCTGGTTCCCTGGGTGCCTCTGCTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VALCPLQSLAGTLTW*PLPALVPWVPLLWA Trigger: TGCCCAAAGCAGAGGCACCCAGGGAACCAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATGATTGCAACGGACACAGAGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CCA 90 bp | GTAGTAGCTCTGTGTCCGTTGCAATCATTGGCTGGAACTCTGACCTaGTGGCCTCTCCCTGCTCTGGTTCCCTGGGTGCCTCTGCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVALCPLQSLAGTLT*WPLPALVPWVPLLW Trigger: CCAAAGCAGAGGCACCCAGGGAACCAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATGATTGCAACGGACACAGAGCTACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS GCA 90 bp | CATAGCGTTTCCTCCGTGGTGAGGTTCTATTGGCTACCACCGGGTTaGCCACATAATCCTCCATTAGGTATAAGGGAGGGGGCTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSVSSVVRFYWLPPG*PHNPPLGIREGAPK Trigger: CTTTGGAGCCCCCTCCCTTATACCTAATGGAGGATTATGTGGGCAACCCGGTGGTAGCCAATAGAACCTCACCACGGAGGAAACGCTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS TCA 90 bp | CTCTCCTCGGTGACTCTTATGTTCTGCATAGCGTTTCCTCCGTGGTaGGGTTCTATTGGCTACCACCGGGTTGCCCACATAATCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSVTLMFCIAFPPW*GSIGYHRVAHIILH Trigger: ATGGAGGATTATGTGGGCAACCCGGTGGTAGCCAATAGAACCTCACCACGGAGGAAACGCTATGCAGAACATAAGAGTCACCGAGGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACTCAATGGCTGAGGACTaGTCGGTCACCCACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNSMAED*SVTHRL Trigger: GAGCCTGTGGGTGACCGACAAGTCCTCAGCCATTGA...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCCCCCTGCAACCGTTTTaGACCGGCCTGGCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: MPNTGVHRFYRRVPESPIPLQPF*TGLASL Trigger: TAAAGAAGCCAGGCCGGTCAAAAACGGTTGCAGGGG...GATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACATCAATGGCTGAGGACTaGTCGGTCACCCACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TQVLQKGSREPNHKTRLTSMAED*SVTHRL Trigger: GAGCCTGTGGGTGACCGACAAGTCCTCAGCCATTGA...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGTCAATGGCTGAGGACTaGTCGGTCACCCACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILNAKYWCTQVLQKGSRESMAED*SVTHRL Trigger: GAGCCTGTGGGTGACCGACAAGTCCTCAGCCATTGA...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CCA 90 bp | GACTCTTATGTTCTGCATAGCGTTTCCTCCGTGGTGAGGTTCTATTaGCTACCACCGGGTTGCCCACATAATCCTCCATTAGGTATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSYVLHSVSSVVRFY*LPPGCPHNPPLGIR Trigger: CCTTATACCTAATGGAGGATTATGTGGGCAACCCGGTGGTAGCCAATAGAACCTCACCACGGAGGAAACGCTATGCAGAACATAAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACATCCATGCTGTTGCCTaGGATGCCACGGAGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNIHAVA*DATEIS Trigger: GCTTATCTCCGTGGCATCCAAGGCAACAGCATGGAT...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGAGGAGAGTTACCGGTTTaGATCTCCCCCAGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRGELPV*ISPSTV Trigger: CACAGTGCTGGGGGAGATCAAAACCGGTAACTCTCC...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGACCCCTGCAACCGTTTTaGACCGGCCTGGCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRPLQPF*TGLASL Trigger: TAAAGAAGCCAGGCCGGTCAAAAACGGTTGCAGGGG...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCCTGCAACCGTTTTaGACCGGCCTGGCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ILNAKYWCTQVLQKGSREPLQPF*TGLASL Trigger: TAAAGAAGCCAGGCCGGTCAAAAACGGTTGCAGGGG...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGAATCCATGCTGTTGCCTaGGATGCCACGGAGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRIHAVA*DATEIS Trigger: GCTTATCTCCGTGGCATCCAAGGCAACAGCATGGAT...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGGAGAGTTACCGGTTTaGATCTCCCCCAGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTECQILVYTGFTEGFPRGELPV*ISPSTV Trigger: CACAGTGCTGGGGGAGATCAAAACCGGTAACTCTCC...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACAATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGGAGAGTTACCGGTTTaGATCTCCCCCAGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TILNAKYWCTQVLQKGSRGELPV*ISPSTV Trigger: CACAGTGCTGGGGGAGATCAAAACCGGTAACTCTCC...TCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCTGCTCGGACATAGGTTaGCGAAGTTTTGCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TECQILVYTGFTEGFPRACSDIG*RSFALR Trigger: TCTCAGTGCAAAACTTCGCAAACCTATGTCCGAGCA...GGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | GCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAGATGGACATCACCTaGTTCACCTGTAAGATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AKYWCTQVLQKGSREPNHKMDIT*FTCKIV Trigger: CACGATCTTACAGGTGAACAAGGTGATGTCCATCTT...GTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS TCA 90 bp | AGTGTCTATTCGTATCCAGCGCCAGCCTACGAGTTTGTTGTTTTCTaGAGTCAGTGCTCGGACATAGGTTTGCGAAGTTTTGCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVYSYPAPAYEFVVF*SQCSDIGLRSFALR Trigger: TCTCAGTGCAAAACTTCGCAAACCTATGTCCGAGCACTGACTTCAGAAAACAACAAACTCGTAGGCTGGCGCTGGATACGAATAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAATCCATGCTGTTGCCTaGGATGCCACGGAGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTECQILVYTGFTEGFPRIHAVA*DATEIS Trigger: GCTTATCTCCGTGGCATCCAAGGCAACAGCATGGAT...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACATCCGCCTGGATCAGCTaGATGATGAGGGAATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TQVLQKGSREPNHKTRLTSAWIS*MMRELR Trigger: TCTCAATTCCCTCATCATCAAGCTGATCCAGGCGGA...TGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | TACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACTCCGCCTGGATCAGCTaGATGATGAGGGAATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YTGFTEGFPRAQSQNKVNSAWIS*MMRELR Trigger: TCTCAATTCCCTCATCATCAAGCTGATCCAGGCGGA...GTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACTGCTCGGACATAGGTTaGCGAAGTTTTGCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNCSDIG*RSFALR Trigger: TCTCAGTGCAAAACTTCGCAAACCTATGTCCGAGCA...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAGCCTACGAGTTTGTaGTTTTCTGAAGTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TECQILVYTGFTEGFPRAQPTSL*FSEVSA Trigger: AGCACTGACTTCAGAAAACAACAAACTCGTAGGCTG...GGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACCGCCAGCCTACGAGTTaGTTGTTTTCTGAAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILVYTGFTEGFPRAQSQNRQPTS*LFSEVS Trigger: ACTGACTTCAGAAAACAACAAACTCGTAGGCTGGCG...GTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCCAAGATGGACATCACCTaGTTCACCTGTAAGATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TECQILVYTGFTEGFPRAKMDIT*FTCKIV Trigger: CACGATCTTACAGGTGAACAAGGTGATGTCCATCTT...GGCTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACAATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGATTCCGGCAAACTCCTTaGATCCATGCTGTTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TILNAKYWCTQVLQKGSRFRQTP*IHAVAL Trigger: CAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAA...TCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGATTCCGGCAAACTCCTTaGATCCATGCTGTTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTECQILVYTGFTEGFPRFRQTP*IHAVAL Trigger: CAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAA...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGACGCCAGCCTACGAGTTaGTTGTTTTCTGAAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGFTEGFPRAQSQNKVNRRQPTS*LFSEVS Trigger: ACTGACTTCAGAAAACAACAAACTCGTAGGCTGGCG...TCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS GCA 90 bp | GAGAGTCTTCCGGCAAACTCCTTTGATCCATGCTGTTGCCTTGGATaGCACGGAGATAAGCAAGAAATATCACATAAAACAAGATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ESLPANSFDPCCCLG*HGDKQEISHKTRWT Trigger: TGTCCATCTTGTTTTATGTGATATTTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAAGACTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CCA 90 bp | ACATCCACCATCTGTTTGGAAAGCTTGTTTTTCAAGATATCCGCCTaGATCAGCTTGATGATGAGGGAATTGAGAGAGTCTTCCGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSTICLESLFFKISA*ISLMMRELRESSGK Trigger: TTTGCCGGAAGACTCTCTCAATTCCCTCATCATCAAGCTGATCCAGGCGGATATCTTGAAAAACAAGCTTTCCAAACAGATGGTGGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGATGCTCGGACATAGGTTaGCGAAGTTTTGCACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTECQILVYTGFTEGFPRCSDIG*RSFALR Trigger: TCTCAGTGCAAAACTTCGCAAACCTATGTCCGAGCA...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | ATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAGCAGCCTACGAGTTTGTaGTTTTCTGAAGTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILNAKYWCTQVLQKGSREQPTSL*FSEVSA Trigger: AGCACTGACTTCAGAAAACAACAAACTCGTAGGCTG...CTCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGACAGCCTACGAGTTTGTaGTTTTCTGAAGTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NTECQILVYTGFTEGFPRQPTSL*FSEVSA Trigger: AGCACTGACTTCAGAAAACAACAAACTCGTAGGCTG...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | CAGGTTTTACAGAAGGGTTCCCGAGAGCCCAATCACAAAACAAGGTTAACAGATATCTGTTTGGAAAGCTaGTTTTTCAAGATATCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QVLQKGSREPNHKTRLTDICLES*FFKISA Trigger: GGCGGATATCTTGAAAAACAAGCTTTCCAAACAGAT...ATCTGTTAACCTTGTTTTGTGATTGGGCTCTCGGGAACCCTTCTGTAAAACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS-3UTR CAA 90 bp | AATACTGAATGCCAAATACTGGTGTACACAGGTTTTACAGAAGGGTTCCCGAGAATCTGTTTGGAAAGCTaGTTTTTCAAGATATCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: NTECQILVYTGFTEGFPRICLES*FFKISA Trigger: GGCGGATATCTTGAAAAACAAGCTTTCCAAACAGAT...TCTCGGGAACCCTTCTGTAAAACCTGTGTACACCAGTATTTGGCATTCAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS TCA 72 bp | CAGCACTGTGACCTGGTGTCCCCGAATGTCAATGGCTaGGGACTTGTCGGTCACCCACAGGCTCTCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QHCDLVSPNVNG*GLVGHPQALTV Trigger: GACAGTGAGAGCCTGTGGGTGACCGACAAGTCCTCAGCCATTGACATTCGGGGACACCAGGTCACAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 90 bp | GGGGCGAATTGTAGCGTCTCTGTTGCCGTAGTAGCTCTGTGTCCGTaGCAATCATTGGCTGGAACTCTGACCTGGTGGCCTCTCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GANCSVSVAVVALCP*QSLAGTLTWWPLPA Trigger: AGCAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATGATTGCAACGGACACAGAGCTACTACGGCAACAGAGACGCTACAATTCGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 90 bp | CCCAGCACTGTGACCTGGTGTCCCCGAATGTCAATGGCTGAGGACTaGTCGGTCACCCACAGGCTCTCACTGTCACACACTGAGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSTVTWCPRMSMAED*SVTHRLSLSHTEYS Trigger: AGAGTACTCAGTGTGTGACAGTGAGAGCCTGTGGGTGACCGACAAGTCCTCAGCCATTGACATTCGGGGACACCAGGTCACAGTGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CCA 72 bp | TGCCGTAGTAGCTCTGTGTCCGTTGCAATCATTGGCTaGAACTCTGACCTGGTGGCCTCTCCCTGCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRSSSVSVAIIG*NSDLVASPCSG Trigger: ACCAGAGCAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATGATTGCAACGGACACAGAGCTACTACGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 72 bp | GTGACCTGGTGTCCCCGAATGTCAATGGCTGAGGACTaGTCGGTCACCCACAGGCTCTCACTGTCACACACT | + |
|
Preference number: 6 (lower is better) Translates to: VTWCPRMSMAED*SVTHRLSLSHT Trigger: AGTGTGTGACAGTGAGAGCCTGTGGGTGACCGACAAGTCCTCAGCCATTGACATTCGGGGACACCAGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 72 bp | TCTGTTGCCGTAGTAGCTCTGTGTCCGTTGCAATCATaGGCTGGAACTCTGACCTGGTGGCCTCTCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVAVVALCPLQS*AGTLTWWPLPA Trigger: AGCAGGGAGAGGCCACCAGGTCAGAGTTCCAGCCAATGATTGCAACGGACACAGAGCTACTACGGCAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS GCA 72 bp | TCCTCCGTGGTGAGGTTCTATTGGCTACCACCGGGTTaGCCACATAATCCTCCATTAGGTATAAGGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSVVRFYWLPPG*PHNPPLGIREG Trigger: CCCCTCCCTTATACCTAATGGAGGATTATGTGGGCAACCCGGTGGTAGCCAATAGAACCTCACCACGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 72 bp | TGTAGCGTCTCTGTTGCCGTAGTAGCTCTGTGTCCGTaGCAATCATTGGCTGGAACTCTGACCTGGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSVSVAVVALCP*QSLAGTLTWWP Trigger: AGGCCACCAGGTCAGAGTTCCAGCCAATGATTGCAACGGACACAGAGCTACTACGGCAACAGAGACGCTACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS TCA 72 bp | GTGACTCTTATGTTCTGCATAGCGTTTCCTCCGTGGTaGGGTTCTATTGGCTACCACCGGGTTGCCCACATA | + |
|
Preference number: 6 (lower is better) Translates to: VTLMFCIAFPPW*GSIGYHRVAHI Trigger: TATGTGGGCAACCCGGTGGTAGCCAATAGAACCTCACCACGGAGGAAACGCTATGCAGAACATAAGAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CCA 72 bp | GTTCTGCATAGCGTTTCCTCCGTGGTGAGGTTCTATTaGCTACCACCGGGTTGCCCACATAATCCTCCATTA | + |
|
Preference number: 6 (lower is better) Translates to: VLHSVSSVVRFY*LPPGCPHNPPL Trigger: TAATGGAGGATTATGTGGGCAACCCGGTGGTAGCCAATAGAACCTCACCACGGAGGAAACGCTATGCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 72 bp | GATGAGGGAATTGAGAGAGTCTTCCGGCAAACTCCTTaGATCCATGCTGTTGCCTTGGATGCCACGGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: DEGIERVFRQTP*IHAVALDATEI Trigger: TATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAAGACTCTCTCAATTCCCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS GCA 72 bp | CTGAAGTCAGTGCTCGGACATAGGTTTGCGAAGTTTTaGACTGAGAGTTCCAGTGTTTGTCATCAATCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LKSVLGHRFAKF*TESSSVCHQSP Trigger: GGGGGATTGATGACAAACACTGGAACTCTCAGTGCAAAACTTCGCAAACCTATGTCCGAGCACTGACTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 90 bp | CAGCTTGATGATGAGGGAATTGAGAGAGTCTTCCGGCAAACTCCTTaGATCCATGCTGTTGCCTTGGATGCCACGGAGATAAGCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QLDDEGIERVFRQTP*IHAVALDATEISKK Trigger: TTTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAAGACTCTCTCAATTCCCTCATCATCAAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS TCA 72 bp | TCGTATCCAGCGCCAGCCTACGAGTTTGTTGTTTTCTaGAGTCAGTGCTCGGACATAGGTTTGCGAAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SYPAPAYEFVVF*SQCSDIGLRSF Trigger: AAAACTTCGCAAACCTATGTCCGAGCACTGACTTCAGAAAACAACAAACTCGTAGGCTGGCGCTGGATACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS GCA 72 bp | GAGAGTCTTCCGGCAAACTCCTTTGATCCATGCTGTTaGCTTGGATGCCACGGAGATAAGCAAGAAATATCA | + |
|
Preference number: 6 (lower is better) Translates to: ESLPANSFDPCC*LGCHGDKQEIS Trigger: TGATATTTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAAGACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS TCA 72 bp | TCCAGTGTTTGTCATCAATCCCCCTGCAACCGTTTTTaGCCGGCCTGGCTTCTTTACATCTCGTTTCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSVCHQSPCNRF*PAWLLYISFHK Trigger: TTTATGAAACGAGATGTAAAGAAGCCAGGCCGGTCAAAAACGGTTGCAGGGGGATTGATGACAAACACTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 72 bp | GTCTTCCGGCAAACTCCTTTGATCCATGCTGTTGCCTaGGATGCCACGGAGATAAGCAAGAAATATCACATA | + |
|
Preference number: 6 (lower is better) Translates to: VFRQTPLIHAVA*DATEISKKYHI Trigger: TATGTGATATTTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 72 bp | GAAAGCTTGTTTTTCAAGATATCCGCCTGGATCAGCTaGATGATGAGGGAATTGAGAGAGTCTTCCGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ESLFFKISAWIS*MMRELRESSGK Trigger: TTTGCCGGAAGACTCTCTCAATTCCCTCATCATCAAGCTGATCCAGGCGGATATCTTGAAAAACAAGCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||
| CDS CAA 90 bp | ATTGAGAGAGTCTTCCGGCAAACTCCTTTGATCCATGCTGTTGCCTaGGATGCCACGGAGATAAGCAAGAAATATCACATAAAACAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: IERVFRQTPLIHAVA*DATEISKKYHIKQD Trigger: ATCTTGTTTTATGTGATATTTCTTGCTTATCTCCGTGGCATCCAAGGCAACAGCATGGATCAAAGGAGTTTGCCGGAAGACTCTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050484.9 ENSMUST00000112244.8 ENSMUST00000204542.3 |
||