Pregenerated sensors for NTAN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022681Ensembl transcript IDs: ENSMUST00000023362.15, ENSMUST00000115805.3
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGTCCTCCAGAGGCGGGTaGGCCCGGACCAGCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TSNHLYQVKMNSSVNSELSSRGG*ARTSST Trigger: TGTGGAGCTGGTCCGGGCGCACCCGCCTCTGGAGGA...CAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR GCA 90 bp | ACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCTTGCAGCACGCAGTTaGTCCTCTGGACCACGATCT | + |
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Preference number: 4 (lower is better) Translates to: TEEVKVCRCRFQTSNHLYLAARS*SSGPRS Trigger: AGATCGTGGTCCAGAGGAGCAACTGCGTGCTGCAAG...ATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR GCA 90 bp | GAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGCTTGCAGCACGCAGTTaGTCCTCTGGACCACGATCT | + |
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Preference number: 4 (lower is better) Translates to: EEVKVCRCRFQTSNHLYQLAARS*SSGPRS Trigger: AGATCGTGGTCCAGAGGAGCAACTGCGTGCTGCAAG...CTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CCA 90 bp | ACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATAACCCAGAATGGAGATaGAGCCATCCTTTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TEEVKVCRCRFQTSNHLYNPEWR*SHPLGR Trigger: CCTCCCCAAAGGATGGCTCCATCTCCATTCTGGGTT...ATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CCA 90 bp | ACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGAACCCAGAATGGAGATaGAGCCATCCTTTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TSNHLYQVKMNSSVNSELNPEWR*SHPLGR Trigger: CCTCCCCAAAGGATGGCTCCATCTCCATTCTGGGTT...CAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CCA 90 bp | ACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGCGGCCAGAGGAGACGTaGAAAGGCTCTCTAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: TSNHLYQVKMNSSVNSELRPEET*KGSLGF Trigger: AAATCCTAGAGAGCCTTTCCACGTCTCCTCTGGCCG...CAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023362.15 |
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| CDS-3UTR GCA 90 bp | ACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGATGTGTCAGGCAGGTTaGCCCATTTCCTGTATGTCT | + |
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Preference number: 4 (lower is better) Translates to: TSNHLYQVKMNSSVNSELMCQAG*PISCMS Trigger: AGACATACAGGAAATGGGGCAACCTGCCTGACACAT...CAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR GCA 90 bp | GAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGATGTGTCAGGCAGGTTaGCCCATTTCCTGTATGTCT | + |
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Preference number: 4 (lower is better) Translates to: EEVKVCRCRFQTSNHLYQMCQAG*PISCMS Trigger: AGACATACAGGAAATGGGGCAACCTGCCTGACACAT...CTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR GCA 90 bp | ACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATAGTTTCTGTGACAGCTaGCTGTCATCACTGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TEEVKVCRCRFQTSNHLYSFCDS*LSSLKP Trigger: AGGCTTCAGTGATGACAGGCAGCTGTCACAGAAACT...ATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR GCA 90 bp | ACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGAGTTTCTGTGACAGCTaGCTGTCATCACTGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TSNHLYQVKMNSSVNSELSFCDS*LSSLKP Trigger: AGGCTTCAGTGATGACAGGCAGCTGTCACAGAAACT...CAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CCA 90 bp | ACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATAGGGGACTTCAGCTTTaGTGTCAGATCCATCACAAT | + |
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Preference number: 4 (lower is better) Translates to: TEEVKVCRCRFQTSNHLYRGLQL*CQIHHN Trigger: ATTGTGATGGATCTGACACCAAAGCTGAAGTCCCCT...ATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CCA 90 bp | AGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGATGAGGGGACTTCAGCTTTaGTGTCAGATCCATCACAAT | + |
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Preference number: 4 (lower is better) Translates to: SNHLYQVKMNSSVNSELMRGLQL*CQIHHN Trigger: ATTGTGATGGATCTGACACCAAAGCTGAAGTCCCCT...CATCAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CCA 90 bp | GAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGCAGAGAAGGATTTTATaGAGCTCATTATCAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: EEVKVCRCRFQTSNHLYQQRRIL*SSLSRG Trigger: TCCCCTTGATAATGAGCTCCATAAAATCCTTCTCTG...CTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR TCA 90 bp | ACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGCGATGCCATAAATaGTTGGAAAGTGATTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TEEVKVCRCRFQTSNHLYQRCHK*LESDFH Trigger: ATGAAAATCACTTTCCAATCATTTATGGCATCGCTG...ATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR TCA 90 bp | AGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGATGCAGCGATGCCATAAATaGTTGGAAAGTGATTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SNHLYQVKMNSSVNSELMQRCHK*LESDFH Trigger: ATGAAAATCACTTTCCAATCATTTATGGCATCGCTG...CATCAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CAA 90 bp | AGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGATGTCTTGCAGCACGCAGTaGCTCCTCTGGACCACGATC | + |
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Preference number: 5 (lower is better) Translates to: SNHLYQVKMNSSVNSELMSCSTQ*LLWTTI Trigger: GATCGTGGTCCAGAGGAGCAACTGCGTGCTGCAAGA...CATCAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CAA 90 bp | ACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCGGGCCTATTCGGAGTaGTTCTGTCTTTGCATCATA | + |
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Preference number: 5 (lower is better) Translates to: TEEVKVCRCRFQTSNHLYRAYSE*FCLCII Trigger: TATGATGCAAAGACAGAACAACTCCGAATAGGCCCG...ATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023362.15 |
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| CDS-3UTR CAA 90 bp | GAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATCAGCTCTGGACCACGATCTaGAAAGGAAGCTCTGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: EEVKVCRCRFQTSNHLYQLWTTI*KGSSVN Trigger: ATTTACAGAGCTTCCTTTCAAGATCGTGGTCCAGAG...CTGATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CAA 90 bp | ACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGCTCTGGACCACGATCTaGAAAGGAAGCTCTGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: TSNHLYQVKMNSSVNSELLWTTI*KGSSVN Trigger: ATTTACAGAGCTTCCTTTCAAGATCGTGGTCCAGAG...CAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CAA 90 bp | AGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGATGCTCTCTAGGATTTGCTaGTCATCTTGCTGCAACCAG | + |
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Preference number: 5 (lower is better) Translates to: SNHLYQVKMNSSVNSELMLSRIC*SSCCNQ Trigger: CTGGTTGCAGCAAGATGACAAGCAAATCCTAGAGAG...CATCAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023362.15 |
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| CDS-3UTR CAA 90 bp | ACCAGCAACCATCTTTATCAGGTGAAGATGAATTCTTCAGTAAACTCTGAGCTGATGTCATCATCCTGTTaGTCAAATTCACTGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: TSNHLYQVKMNSSVNSELMSSSC*SNSLRS Trigger: GCTTCTCAGTGAATTTGACAAACAGGATGATGACAT...CAGCTCAGAGTTTACTGAAGAATTCATCTTCACCTGATAAAGATGGTTGCTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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| CDS-3UTR CAA 90 bp | ACGGAAGAAGTAAAAGTGTGCAGGTGTAGATTCCAAACCAGCAACCATCTTTATATGTCATCATCCTGTTaGTCAAATTCACTGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: TEEVKVCRCRFQTSNHLYMSSSC*SNSLRS Trigger: GCTTCTCAGTGAATTTGACAAACAGGATGATGACAT...ATAAAGATGGTTGCTGGTTTGGAATCTACACCTGCACACTTTTACTTCTTCCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023362.15 ENSMUST00000115805.3 |
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