Pregenerated sensors for NT5M (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032615Ensembl transcript IDs: ENSMUST00000102695.4
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGAACTGCAGCATAACCCTCAGTGGGCTGCCTGCTGTCCAGTTGTaGGCTGTGAGCCCCATGCTGAACCACGAGAGAGCCATAGTACAG | + |
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Preference number: 1 (lower is better) Translates to: GNCSITLSGLPAVQL*AVSPMLNHERAIVQ Trigger: CTGTACTATGGCTCTCTCGTGGTTCAGCATGGGGCTCACAGCTCACAACTGGACAGCAGGCAGCCCACTGAGGGTTATGCTGCAGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 90 bp | GTACCTACATGCCTGCCAGGGGAACCGTTGTCATCTGTCTGTCCCTaGCACCCCTCGTCTTGCAGATCCTGGATCAGGGTACTTCCATGT | + |
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Preference number: 1 (lower is better) Translates to: VPTCLPGEPLSSVCP*HPSSCRSWIRVLPC Trigger: ACATGGAAGTACCCTGATCCAGGATCTGCAAGACGAGGGGTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCATGTAGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR TCA 90 bp | GGATCAGGGTACTTCCATGTCTCAGAGAACCCCTATTGCACACAGTaGGAGGCAGTGGCATGGGGCATCTGCCTGAGGTCAGACCAACTT | + |
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Preference number: 1 (lower is better) Translates to: GSGYFHVSENPYCTQ*EAVAWGICLRSDQL Trigger: AAGTTGGTCTGACCTCAGGCAGATGCCCCATGCCACTGCCTCTCACTGTGTGCAATAGGGGTTCTCTGAGACATGGAAGTACCCTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 90 bp | GAGCAAGAGACCGTAGGGAGGGTCTCGGTGGCCTCCAAAAGAGCCTaGTGGCCATGGAAATCCAGAAAGACTAAGTATGTAAGCTGGACA | + |
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Preference number: 1 (lower is better) Translates to: EQETVGRVSVASKRA*WPWKSRKTKYVSWT Trigger: TGTCCAGCTTACATACTTAGTCTTTCTGGATTTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCTCCCTACGGTCTCTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR TCA 90 bp | CCTTGCTGGGCTAGGGGAAGAAGGGAAGTGTGTCAGACGTTGTTTTaGCCAAAGTGTTCACTGGGATCCTCCAGGAAGTACCAGGGAACT | + |
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Preference number: 1 (lower is better) Translates to: PCWARGRREVCQTLF*PKCSLGSSRKYQGT Trigger: AGTTCCCTGGTACTTCCTGGAGGATCCCAGTGAACACTTTGGTCAAAACAACGTCTGACACACTTCCCTTCTTCCCCTAGCCCAGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR TCA 90 bp | ACCCCTATTGCACACAGTGAGAGGCAGTGGCATGGGGCATCTGCCTaGGGTCAGACCAACTTATCTGAGAACACGCATCTTTCTTCTAGC | + |
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Preference number: 1 (lower is better) Translates to: TPIAHSERQWHGASA*GQTNLSENTHLSSS Trigger: GCTAGAAGAAAGATGCGTGTTCTCAGATAAGTTGGTCTGACCTCAGGCAGATGCCCCATGCCACTGCCTCTCACTGTGTGCAATAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 90 bp | ACCGTAGGGAGGGTCTCGGTGGCCTCCAAAAGAGCCTGGTGGCCATaGAAATCCAGAAAGACTAAGTATGTAAGCTGGACAAGATTCTAC | + |
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Preference number: 1 (lower is better) Translates to: TVGRVSVASKRAWWP*KSRKTKYVSWTRFY Trigger: GTAGAATCTTGTCCAGCTTACATACTTAGTCTTTCTGGATTTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCTCCCTACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR-3UTR TCA 90 bp | CTACATGCCTGCCAGGGGAACCGTTGTCATCTGTCTGTCCCTGGCACCCCTCGTCCTGCTGTCCAGTTGTaGGCTGTGAGCCCCATGCTG | + |
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Preference number: 2 (lower is better) Translates to: LHACQGNRCHLSVPGTPRPAVQL*AVSPML Trigger: CAGCATGGGGCTCACAGCTCACAACTGGACAGCAGG...ACGAGGGGTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCATGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCGTAGGGAGGGTCTCGGTGGCCTCCAAAAGAGCCTGGTGGCCATGGAACAGCATAACCCTCAGTaGGCTGCCTGCTGTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: RDRREGLGGLQKSLVAMEQHNPQ*AACCPV Trigger: AACTGGACAGCAGGCAGCCCACTGAGGGTTATGCTG...TTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCTCCCTACGGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCGTAGGGAGGGTCTCGGTGGCCTCCAAAAGAGCCTGGTGGCCATGGAATCATCTGTCTGTCCCTaGCACCCCTCGTCTTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RDRREGLGGLQKSLVAMESSVCP*HPSSCR Trigger: TCTGCAAGACGAGGGGTGCCAGGGACAGACAGATGA...TTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCTCCCTACGGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CAA 90 bp | TGCAGATCCTGGATCAGGGTACTTCCATGTCTCAGAGAACCCCTATaGCACACAGTGAGAGGCAGTGGCATGGGGCATCTGCCTGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: CRSWIRVLPCLREPL*HTVRGSGMGHLPEV Trigger: GACCTCAGGCAGATGCCCCATGCCACTGCCTCTCACTGTGTGCAATAGGGGTTCTCTGAGACATGGAAGTACCCTGATCCAGGATCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCGGTGGCCTCCAAAAGAGCCTGGTGGCCATGGAAATCCAGAAAGACTAAGTGTGGCATGGGGCATCTaGCTGAGGTCAGACCAACTT | + |
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Preference number: 2 (lower is better) Translates to: SRWPPKEPGGHGNPERLSVAWGI*LRSDQL Trigger: AAGTTGGTCTGACCTCAGGCAGATGCCCCATGCCAC...ACTTAGTCTTTCTGGATTTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTGGGCTAGGGGAAGAAGGGAAGTGTGTCAGACGTTGTTTTGACCAAAGTGAAGTACCAGGGAACTaGAGCATAACCCTCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LAGLGEEGKCVRRCFDQSEVPGN*SITLSG Trigger: CCCACTGAGGGTTATGCTGCAGTTCCCTGGTACTTC...ACTTTGGTCAAAACAACGTCTGACACACTTCCCTTCTTCCCCTAGCCCAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR TCA 72 bp | AGCATAACCCTCAGTGGGCTGCCTGCTGTCCAGTTGTaGGCTGTGAGCCCCATGCTGAACCACGAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SITLSGLPAVQL*AVSPMLNHERA Trigger: GGCTCTCTCGTGGTTCAGCATGGGGCTCACAGCTCACAACTGGACAGCAGGCAGCCCACTGAGGGTTATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 72 bp | CCAGGAAGTACCAGGGAACTGCAGCATAACCCTCAGTaGGCTGCCTGCTGTCCAGTTGTGAGCTGTGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: PGSTRELQHNPQ*AACCPVVSCEP Trigger: GGGCTCACAGCTCACAACTGGACAGCAGGCAGCCCACTGAGGGTTATGCTGCAGTTCCCTGGTACTTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 72 bp | TGCCTGCCAGGGGAACCGTTGTCATCTGTCTGTCCCTaGCACCCCTCGTCTTGCAGATCCTGGATCAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: CLPGEPLSSVCP*HPSSCRSWIRV Trigger: TACCCTGATCCAGGATCTGCAAGACGAGGGGTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR GCA 72 bp | CCGTTGTCATCTGTCTGTCCCTGGCACCCCTCGTCTTaGAGATCCTGGATCAGGGTACTTCCATGTCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: PLSSVCPWHPSS*RSWIRVLPCLR Trigger: TCTGAGACATGGAAGTACCCTGATCCAGGATCTGCAAGACGAGGGGTGCCAGGGACAGACAGATGACAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 72 bp | TCTGTCTGTCCCTGGCACCCCTCGTCTTGCAGATCCTaGATCAGGGTACTTCCATGTCTCAGAGAACCCCTA | + |
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Preference number: 3 (lower is better) Translates to: SVCPWHPSSCRS*IRVLPCLREPL Trigger: TAGGGGTTCTCTGAGACATGGAAGTACCCTGATCCAGGATCTGCAAGACGAGGGGTGCCAGGGACAGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 72 bp | GTAGGGAGGGTCTCGGTGGCCTCCAAAAGAGCCTGGTaGCCATGGAAATCCAGAAAGACTAAGTATGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: VGRVSVASKRAW*PWKSRKTKYVS Trigger: GCTTACATACTTAGTCTTTCTGGATTTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCTCCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 72 bp | ACCGTAGGGAGGGTCTCGGTGGCCTCCAAAAGAGCCTaGTGGCCATGGAAATCCAGAAAGACTAAGTATGTA | + |
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Preference number: 3 (lower is better) Translates to: TVGRVSVASKRA*WPWKSRKTKYV Trigger: TACATACTTAGTCTTTCTGGATTTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCTCCCTACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 72 bp | AGGGTCTCGGTGGCCTCCAAAAGAGCCTGGTGGCCATaGAAATCCAGAAAGACTAAGTATGTAAGCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: RVSVASKRAWWP*KSRKTKYVSWT Trigger: TGTCCAGCTTACATACTTAGTCTTTCTGGATTTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CCA 72 bp | TGGCCATGGAAATCCAGAAAGACTAAGTATGTAAGCTaGACAAGATTCTACAGTAGAGGTACCTACATGCCT | + |
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Preference number: 3 (lower is better) Translates to: WPWKSRKTKYVS*TRFYSRGTYMP Trigger: AGGCATGTAGGTACCTCTACTGTAGAATCTTGTCCAGCTTACATACTTAGTCTTTCTGGATTTCCATGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR GCA 90 bp | GAGGTACCTACATGCCTGCCAGGGGAACCGTTGTCATCTGTCTGTCCCTGGCACCCCATGAGTGCAGCCTaGGGCGAGGGGGCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: EVPTCLPGEPLSSVCPWHPMSAA*GEGAAA Trigger: AGCTGCAGCCCCCTCGCCGCAGGCTGCACTCATGGG...GTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCATGTAGGTACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR CCA 90 bp | GAGGTACCTACATGCCTGCCAGGGGAACCGTTGTCATCTGTCTGTCCCTGGCACGCTTGCTGTCCAAGATaGCCTTCCAGTCGTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: EVPTCLPGEPLSSVCPWHACCPR*PSSRLP Trigger: GGGCAGACGACTGGAAGGCCATCTTGGACAGCAAGC...GTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCATGTAGGTACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR GCA 90 bp | AGAGACCGTAGGGAGGGTCTCGGTGGCCTCCAAAAGAGCCTGGTGGCCATGGAAAAGTCAGGGCCAAAGTaGTTCTCCACCCAGGCATAC | + |
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Preference number: 4 (lower is better) Translates to: RDRREGLGGLQKSLVAMEKSGPK*FSTQAY Trigger: GTATGCCTGGGTGGAGAAGCACTTTGGCCCTGACTT...TTCCATGGCCACCAGGCTCTTTTGGAGGCCACCGAGACCCTCCCTACGGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR GCA 90 bp | CTTGCTGGGCTAGGGGAAGAAGGGAAGTGTGTCAGACGTTGTTTTGACCAAAGTTCGTCTGCCCATGAGTaGAGCCTGCGGCGAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LAGLGEEGKCVRRCFDQSSSAHE*SLRRGG Trigger: GCCCCCTCGCCGCAGGCTGCACTCATGGGCAGACGA...ACTTTGGTCAAAACAACGTCTGACACACTTCCCTTCTTCCCCTAGCCCAGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CAA 72 bp | ACAGTAGAGGTACCTACATGCCTGCCAGGGGAACCGTaGTCATCTGTCTGTCCCTGGCACCCCTCGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TVEVPTCLPGEP*SSVCPWHPSSC Trigger: GCAAGACGAGGGGTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCATGTAGGTACCTCTACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR GCA 90 bp | GAACCGTTGTCATCTGTCTGTCCCTGGCACCCCTCGTCTTGCAGATCCTGGATCGAGGTAAAGAGGATGTaGTCCCAGCTGGGATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EPLSSVCPWHPSSCRSWIEVKRM*SQLGCG Trigger: GCCACATCCCAGCTGGGAGCACATCCTCTTTACCTC...GATCCAGGATCTGCAAGACGAGGGGTGCCAGGGACAGACAGATGACAACGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| 3UTR CAA 72 bp | ACCGTTGTCATCTGTCTGTCCCTGGCACCCCTCGTCTaGCAGATCCTGGATCAGGGTACTTCCATGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TVVICLSLAPLV*QILDQGTSMSQ Trigger: CTGAGACATGGAAGTACCCTGATCCAGGATCTGCAAGACGAGGGGTGCCAGGGACAGACAGATGACAACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGTACCAGGGAACTGCAGCATAACCCTCAGTGGGCTGCCTGCTGTCCATATGAGAAGGTCGGCTaGGATCACAGTCTTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGSTRELQHNPQWAACCPYEKVG*DHSLVS Trigger: AGAGACAAGACTGTGATCTCAGCCGACCTTCTCATA...TGGACAGCAGGCAGCCCACTGAGGGTTATGCTGCAGTTCCCTGGTACTTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR TCA 90 bp | GAGGTACCTACATGCCTGCCAGGGGAACCGTTGTCATCTGTCTGTCCCTGGCACAAAGAAGAAATCCTTTaGCTCCCAGATGCTGATCGC | + |
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Preference number: 4 (lower is better) Translates to: EVPTCLPGEPLSSVCPWHKEEIL*LPDADR Trigger: GCGATCAGCATCTGGGAGTCAAAGGATTTCTTCTTT...GTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCATGTAGGTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR CCA 90 bp | GAGGTACCTACATGCCTGCCAGGGGAACCGTTGTCATCTGTCTGTCCCTGGCACCAGTGTTCTGTAGATTaGCCATCTGCTTCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: EVPTCLPGEPLSSVCPWHQCSVD*PSASQL Trigger: AAGCTGTGAAGCAGATGGCCAATCTACAGAACACTG...GTGCCAGGGACAGACAGATGACAACGGTTCCCCTGGCAGGCATGTAGGTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR GCA 90 bp | AGAGCCTGGTGGCCATGGAAATCCAGAAAGACTAAGTATGTAAGCTGGACAAGATGTAGCCGTCCGTACTaGTCCGACACCCAGAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: RAWWPWKSRKTKYVSWTRCSRPY*SDTQKP Trigger: CGGCTTCTGGGTGTCGGAGCAGTACGGACGGCTACA...TCTTGTCCAGCTTACATACTTAGTCTTTCTGGATTTCCATGGCCACCAGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR CCA 90 bp | CTTTCTGGGCTGTTAATGGGATCTAAGAACACCAGAGCAAGAGACCGTAGGGAGTCACAGTCTTGTCTCTaGTCAACACAATCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LSGLLMGSKNTRARDRRESQSCL*STQSAP Trigger: TGGAGCAGATTGTGTTGACCAGAGACAAGACTGTGA...CTCCCTACGGTCTCTTGCTCTGGTGTTCTTAGATCCCATTAACAGCCCAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR GCA 90 bp | CATATTGGCAACAAATATTCACACCTGCTGACTCCTTTCTGGGCTGTTAATGGGTGTAGATTGGCCATCTaGTTCACAGCTTCCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: HIGNKYSHLLTPFWAVNGCRLAI*FTASTA Trigger: AGCCGTGGAAGCTGTGAAGCAGATGGCCAATCTACA...CCCATTAACAGCCCAGAAAGGAGTCAGCAGGTGTGAATATTTGTTGCCAATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS GCA 90 bp | ATGCTGATCGCCTTCTCGCTTAGCCCAGGCTGTAGCCGTCCGTACTaGTCCGACACCCAGAAGCCGCGCCGGTCCTCCAGCGCCACGAAG | + |
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Preference number: 5 (lower is better) Translates to: MLIAFSLSPGCSRPY*SDTQKPRRSSSATK Trigger: CTTCGTGGCGCTGGAGGACCGGCGCGGCTTCTGGGTGTCGGAGCAGTACGGACGGCTACAGCCTGGGCTAAGCGAGAAGGCGATCAGCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS GCA 90 bp | TGCTGTCCAAGATGGCCTTCCAGTCGTCTGCCCATGAGTGCAGCCTaGGGCGAGGGGGCTGCAGCTGCAGGTGGTAGTTGTGGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CCPRWPSSRLPMSAA*GEGAAAAGGSCGRR Trigger: CCTCCTGCCACAACTACCACCTGCAGCTGCAGCCCCCTCGCCGCAGGCTGCACTCATGGGCAGACGACTGGAAGGCCATCTTGGACAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS TCA 90 bp | CTCAGCCCCTGTGATGTCTGGCCGGTCATCTATGAGAAGGTCGGCTaGGATCACAGTCTTGTCTCTGGTCAACACAATCTGCTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LSPCDVWPVIYEKVG*DHSLVSGQHNLLQK Trigger: TTTCTGGAGCAGATTGTGTTGACCAGAGACAAGACTGTGATCTCAGCCGACCTTCTCATAGATGACCGGCCAGACATCACAGGGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS-3UTR CAA 90 bp | CTTTCTGGGCTGTTAATGGGATCTAAGAACACCAGAGCAAGAGACCGTAGGGAGCAGTACTTGAACATCTaGATGGGGCTTGTACAGATG | + |
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Preference number: 5 (lower is better) Translates to: LSGLLMGSKNTRARDRREQYLNI*MGLVQM Trigger: CATCTGTACAAGCCCCATCAAGATGTTCAAGTACTG...CTCCCTACGGTCTCTTGCTCTGGTGTTCTTAGATCCCATTAACAGCCCAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS GCA 72 bp | GCCTTCTCGCTTAGCCCAGGCTGTAGCCGTCCGTACTaGTCCGACACCCAGAAGCCGCGCCGGTCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AFSLSPGCSRPY*SDTQKPRRSSS Trigger: GCTGGAGGACCGGCGCGGCTTCTGGGTGTCGGAGCAGTACGGACGGCTACAGCCTGGGCTAAGCGAGAAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS GCA 72 bp | CAGATGAAGACATCAGTGTTCTGTAGATTGGCCATCTaGTTCACAGCTTCCACGGCTCCAGGGAGAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QMKTSVFCRLAI*FTASTAPGRGS Trigger: TGAGCCTCTCCCTGGAGCCGTGGAAGCTGTGAAGCAGATGGCCAATCTACAGAACACTGATGTCTTCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS CAA 90 bp | ATGTCTGGCCGGTCATCTATGAGAAGGTCGGCTGAGATCACAGTCTaGTCTCTGGTCAACACAATCTGCTCCAGAAAGTCAGGGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: MSGRSSMRRSAEITV*SLVNTICSRKSGPK Trigger: CTTTGGCCCTGACTTTCTGGAGCAGATTGTGTTGACCAGAGACAAGACTGTGATCTCAGCCGACCTTCTCATAGATGACCGGCCAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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| CDS TCA 72 bp | TGTGATGTCTGGCCGGTCATCTATGAGAAGGTCGGCTaGGATCACAGTCTTGTCTCTGGTCAACACAATCTG | + |
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Preference number: 6 (lower is better) Translates to: CDVWPVIYEKVG*DHSLVSGQHNL Trigger: CAGATTGTGTTGACCAGAGACAAGACTGTGATCTCAGCCGACCTTCTCATAGATGACCGGCCAGACATCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102695.4 |
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