Pregenerated sensors for NT5EL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021718Ensembl transcript IDs: ENSMUST00000022232.6
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTTGGTCCGATCCATTTaGGCACTAACAAAACATACC | + |
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Preference number: 2 (lower is better) Translates to: MFVFLAQHNEESKVTRLDLVRSI*ALTKHT Trigger: GGTATGTTTTGTTAGTGCTCAAATGGATCGGACCAA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACCGCAGGCTGAGGGGGTaGCAGAGCAGGTGGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDRRLRG*QSRWLF Trigger: GAAGAGCCACCTGCTCTGGCACCCCCTCAGCCTGCG...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATGGGTGCCAGAGCAGGTaGCTCTTCCTCAGGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDGCQSR*LFLRGL Trigger: GAGGCCCCTGAGGAAGAGCCACCTGCTCTGGCACCC...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR TCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATGGAGTCCATGTCTCCTaGCTGGTTCCCCTGGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDGVHVS*LVPLGL Trigger: CAAACCCAGGGGAACCAGTCAGGAGACATGGACTCC...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTGCTTCCAGCAGCTGTaGACCCGTTGCTCTGACAAC | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDCFQQL*TRCSDN Trigger: GTTGTCAGAGCAACGGGTGCACAGCTGCTGGAAGCA...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACCCTGACTGGTTCCCCTaGGTTTGGGGAGAGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDPDWFP*VWGESS Trigger: AGAACTCTCTCCCCAAACCCAGGGGAACCAGTCAGG...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTCAAGCCCTTCTGCATaGTGGGCAAGCCTGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDSSPSA*WASLVS Trigger: TGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTGGTTCCCCTGGGTTTaGGGAGAGAGTTCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDWFPWV*GESSSP Trigger: TGGGGAAGAACTCTCTCCCCAAACCCAGGGGAACCA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTCCATGTCTCCTGACTaGTTCCCCTGGGTTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDSMSPD*FPWVWG Trigger: TCCCCAAACCCAGGGGAACCAGTCAGGAGACATGGA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR TCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACAAAGGTCATGCAGAGTaGAATTCCCTGGCGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDKGHAE*NSLAGV Trigger: TACACCCGCCAGGGAATTTCACTCTGCATGACCTTT...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR TCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTCTAACCCAGCAACTTaGGGAAACCTGCCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDSNPAT*GNLPSR Trigger: TCTGGATGGCAGGTTTCCTCAAGTTGCTGGGTTAGA...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR TCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACCTTCCTCAAAGGCTGTaGGGGATGGCGATTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDLPQRL*GMAICL Trigger: CAAACAAATCGCCATCCCTCACAGCCTTTGAGGAAG...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACCAACTTGAGGAAACCTaGCATCCAGAGCTGGGTACT | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDQLEET*HPELGT Trigger: AGTACCCAGCTCTGGATGGCAGGTTTCCTCAAGTTG...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACCCACAATGGGGAGTATaGCCAAAAGGTCATGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDPQWGV*PKGHAE Trigger: CTCTGCATGACCTTTTGGCCATACTCCCCATTGTGG...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACCATGCTGGGCAAGCCTaGTGTCATTTTTCCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDHAGQA*CHFSTS Trigger: TGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATG...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATATGGCCAAAAGGTCATaGAGAGTGAAATTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDMAKRS*RVKFPG Trigger: GCCAGGGAATTTCACTCTGCATGACCTTTTGGCCAT...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTCGATGGCCTGGTTCTaGATCTGGATCAAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDSMAWF*IWIKSK Trigger: TTTGGATTTGATCCAGATGCAGAACCAGGCCATCGA...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACGATGTGAATCTGTCATaGACGTTACTGAGGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDDVNLS*TLLRNQ Trigger: CTGGTTCCTCAGTAACGTCCATGACAGATTCACATC...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATCCACATCAGCATGCGTaGCCTCTAACATTGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDPHQHA*PLTLHL Trigger: CAAATGCAATGTTAGAGGCCACGCATGCTGATGTGG...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATAAAGGCTGTGAGGGATaGCGATTTGTTTGTCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDKGCEG*RFVCRR Trigger: ACGACGACAAACAAATCGCCATCCCTCACAGCCTTT...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTTTTTGACTGCACCATaGCCAAGAGGTTCAGATGTG | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDFLTAP*PRGSDV Trigger: CACATCTGAACCTCTTGGGCATGGTGCAGTCAAAAA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACAACTATCTTTTTGACTaGACCATGCCCAAGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDNYLFD*TMPKRF Trigger: GAACCTCTTGGGCATGGTGCAGTCAAAAAGATAGTT...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTTTTTCCACTTCATGTaGGTCATGGCGATCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDFFHFM*VMAITR Trigger: CCTTGTGATCGCCATGACGCACATGAAGTGGAAAAA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTGCAATTACTCCCAATaGCCCATCTGTTTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDCNYSQ*PICFFL Trigger: GAGGAAGAAACAGATGGGCCATTGGGAGTAATTGCA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACCTCGCAGCTCTAAGTTaGTGCAAATGTTCTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDLAALS*CKCSFM Trigger: CATGAAAGAACATTTGCACCAACTTAGAGCTGCGAG...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR TCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATAATCAGATCCACTCTTaGCAATCCAAGTCTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDNQIHS*QSKSRS Trigger: TGAACGAGACTTGGATTGTCAAGAGTGGATCTGATT...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATCCAGATTTCCAAGGTTaGTCTCACATCTTCTTACAG | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDPDFQG*SHIFLQ Trigger: CTGTAAGAAGATGTGAGAGCAACCTTGGAAATCTGG...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACGCAGCTCTAAGTTGGTaGAAATGTTCTTTCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDAALSW*KCSFMS Trigger: AGACATGAAAGAACATTTGCACCAACTTAGAGCTGC...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR GCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACATGGTTTCCAAAAACTaGAAAATGTACTCCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDMVSKN*KMYSQL Trigger: GAGTTGGGAGTACATTTTGCAGTTTTTGGAAACCAT...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATTTCTCAAATACATACTaGAACGAAGCATCGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDFSNTY*NEASNS Trigger: GCTGTTCGATGCTTCGTTCCAGTATGTATTTGAGAA...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACATGTCTGGAGAAATATaGAAGATTCTTCCTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDMSGEI*KILPSR Trigger: CCTAGAAGGAAGAATCTTCCATATTTCTCCAGACAT...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATACTGAAAATCAAGAGTaGATTCAGGATGCTGAATCT | + |
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Preference number: 4 (lower is better) Translates to: MFVFLAQHNEESKVTRLDTENQE*IQDAES Trigger: AGATTCAGCATCCTGAATCCACTCTTGATTTTCAGT...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 90 bp | CCTTCTGCATGCTGGGCAAGCCTGGTGTCATTTTTCCACTTCATGTaGGTCATGGCGATCACAAGGTCAGCCCCTTCTGCTCGGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSACWASLVSFFHFM*VMAITRSAPSARSS Trigger: GGAGCTCCGAGCAGAAGGGGCTGACCTTGTGATCGCCATGACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 90 bp | CATGCTGGGCAAGCCTGGTGTCATTTTTCCACTTCATGTGCGTCATaGCGATCACAAGGTCAGCCCCTTCTGCTCGGAGCTCCACGGCTA | + |
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Preference number: 5 (lower is better) Translates to: HAGQAWCHFSTSCAS*RSQGQPLLLGAPRL Trigger: TAGCCGTGGAGCTCCGAGCAGAAGGGGCTGACCTTGTGATCGCCATGACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 90 bp | TCGTGGTCATGGCCTCCCAGGATCAAATCAAGCCCTTCTGCATGCTaGGCAAGCCTGGTGTCATTTTTCCACTTCATGTGCGTCATGGCG | + |
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Preference number: 5 (lower is better) Translates to: SWSWPPRIKSSPSAC*ASLVSFFHFMCVMA Trigger: CGCCATGACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCCTGGGAGGCCATGACCACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 90 bp | GGCCTCCCAGGATCAAATCAAGCCCTTCTGCATGCTGGGCAAGCCTaGTGTCATTTTTCCACTTCATGTGCGTCATGGCGATCACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: GLPGSNQALLHAGQA*CHFSTSCASWRSQG Trigger: ACCTTGTGATCGCCATGACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCCTGGGAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 90 bp | CCCATATTCGTGGTCATGGCCTCCCAGGATCAAATCAAGCCCTTCTaGATGCTGGGCAAGCCTGGTGTCATTTTTCCACTTCATGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: PIFVVMASQDQIKPF*MLGKPGVIFPLHVR Trigger: ACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCCTGGGAGGCCATGACCACGAATATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 90 bp | TATTCGTGGTCATGGCCTCCCAGGATCAAATCAAGCCCTTCTGCATaGTGGGCAAGCCTGGTGTCATTTTTCCACTTCATGTGCGTCATG | + |
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Preference number: 5 (lower is better) Translates to: YSWSWPPRIKSSPSA*WASLVSFFHFMCVM Trigger: CATGACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCCTGGGAGGCCATGACCACGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 90 bp | GTCTCACGTGCACTGTCACTAATGGTGGGGAAAGTTCTCAGGCCTTaGTGTCTCGCAGCTCTAAGTTGGTGCAAATGTTCTTTCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: VSRALSLMVGKVLRP*CLAALSWCKCSFMS Trigger: AGACATGAAAGAACATTTGCACCAACTTAGAGCTGCGAGACAGCAAGGCCTGAGAACTTTCCCCACCATTAGTGACAGTGCACGTGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 90 bp | CTGTCATACCTGAGAGTACCTGAATTAAGGAGTGCCACATCAGCATaGGTGGCCTCTAACATTGCATTTGTCACCAGATTTCCAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LSYLRVPELRSATSA*VASNIAFVTRFPRL Trigger: CAACCTTGGAAATCTGGTGACAAATGCAATGTTAGAGGCCACGCATGCTGATGTGGCACTCCTTAATTCAGGTACTCTCAGGTATGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATCTGGTTCCCCTGGGTTaGGGGAGAGAGTTCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: MFVFLAQHNEESKVTRLDLVPLG*GREFFP Trigger: GGGGAAGAACTCTCTCCCCAAACCCAGGGGAACCAG...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 90 bp | GTGGGGAAAGTTCTCAGGCCTTGCTGTCTCGCAGCTCTAAGTTGGTaGAAATGTTCTTTCATGTCTGGAGAAATATGGAAGATTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VGKVLRPCCLAALSW*KCSFMSGEIWKILP Trigger: AGGAAGAATCTTCCATATTTCTCCAGACATGAAAGAACATTTGCACCAACTTAGAGCTGCGAGACAGCAAGGCCTGAGAACTTTCCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 90 bp | ATGGTGGGGAAAGTTCTCAGGCCTTGCTGTCTCGCAGCTCTAAGTTaGTGCAAATGTTCTTTCATGTCTGGAGAAATATGGAAGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: MVGKVLRPCCLAALS*CKCSFMSGEIWKIL Trigger: AAGAATCTTCCATATTTCTCCAGACATGAAAGAACATTTGCACCAACTTAGAGCTGCGAGACAGCAAGGCCTGAGAACTTTCCCCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 90 bp | GTGAGGGATGGCGATTTGTTTGTCGTCGTGATCAAACTCATCCGATaGCCGGAAAGACACTTCTTCTTTCCTTGCAAAATTTTTATGGAT | + |
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Preference number: 5 (lower is better) Translates to: VRDGDLFVVVIKLIR*PERHFFFPCKIFMD Trigger: ATCCATAAAAATTTTGCAAGGAAAGAAGAAGTGTCTTTCCGGCCATCGGATGAGTTTGATCACGACGACAAACAAATCGCCATCCCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACGTGAGGGATGGCGATTaGTTTGTCGTCGTGATCAAA | + |
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Preference number: 5 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDVRDGD*FVVVIK Trigger: TTTGATCACGACGACAAACAAATCGCCATCCCTCAC...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATGTCTCGTTCACTTTCTaGATCCCATATTCGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: MFVFLAQHNEESKVTRLDVSFTF*IPYSWS Trigger: TGACCACGAATATGGGATCAAGAAAGTGAACGAGAC...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACACCAGATTTCCAAGGTaGCTCTCACATCTTCTTACA | + |
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Preference number: 5 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDTRFPR*LSHLLT Trigger: TGTAAGAAGATGTGAGAGCAACCTTGGAAATCTGGT...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATCCAATGCCACATCAATaGGGCAAAGAACTTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: MFVFLAQHNEESKVTRLDPMPHQ*GKELLL Trigger: TAGAAGAAGTTCTTTGCCCAATTGATGTGGCATTGG...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATCCTCTAACATTGCATTaGTCACCAGATTTCCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: MFVFLAQHNEESKVTRLDPLTLH*SPDFQG Trigger: ACCTTGGAAATCTGGTGACAAATGCAATGTTAGAGG...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | CACAAATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACGCTTTCCTTTTGTTATaGTGCTTAAGATGGAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: HKCLCFWPNTMKSQKLQDAFLLL*CLRWKD Trigger: ATCCTTCCATCTTAAGCACAATAACAAAAGGAAAGC...GTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACATTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS-3UTR CAA 90 bp | ATGTTTGTGTTTCTGGCCCAACACAATGAAGAGTCAAAAGTTACAAGACTTGATCCAGGTAAAGTGCATTaGTTTCATATACTCTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: MFVFLAQHNEESKVTRLDPGKVH*FHILFQ Trigger: TTGGAAGAGTATATGAAACAAATGCACTTTACCTGG...ATCAAGTCTTGTAACTTTTGACTCTTCATTGTGTTGGGCCAGAAACACAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 72 bp | TGCTGGGCAAGCCTGGTGTCATTTTTCCACTTCATGTaGGTCATGGCGATCACAAGGTCAGCCCCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: CWASLVSFFHFM*VMAITRSAPSA Trigger: AGCAGAAGGGGCTGACCTTGTGATCGCCATGACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 72 bp | GTGGTCATGGCCTCCCAGGATCAAATCAAGCCCTTCTaGATGCTGGGCAAGCCTGGTGTCATTTTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: VVMASQDQIKPF*MLGKPGVIFPL Trigger: AAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCCTGGGAGGCCATGACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 72 bp | TGGCCTCCCAGGATCAAATCAAGCCCTTCTGCATGCTaGGCAAGCCTGGTGTCATTTTTCCACTTCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: WPPRIKSSPSAC*ASLVSFFHFMC Trigger: GCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCCTGGGAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS TCA 72 bp | TTTCAAGTGCTTCCAGCAGCTGTGCACCCGTTGCTCTaGCAACTAAAACTGGGTCCACAATGGGGAGTATGG | + |
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Preference number: 6 (lower is better) Translates to: FQVLPAAVHPLL*QLKLGPQWGVW Trigger: CCATACTCCCCATTGTGGACCCAGTTTTAGTTGTCAGAGCAACGGGTGCACAGCTGCTGGAAGCACTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 72 bp | TCATGGCCTCCCAGGATCAAATCAAGCCCTTCTGCATaGTGGGCAAGCCTGGTGTCATTTTTCCACTTCATG | + |
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Preference number: 6 (lower is better) Translates to: SWPPRIKSSPSA*WASLVSFFHFM Trigger: CATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCCTGGGAGGCCATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 72 bp | ACTGGGTCCACAATGGGGAGTATGGCCAAAAGGTCATaGAGAGTGAAATTCCCTGGCGGGTGTATTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: TGSTMGSMAKRS*RVKFPGGCILS Trigger: TGACAGAATACACCCGCCAGGGAATTTCACTCTGCATGACCTTTTGGCCATACTCCCCATTGTGGACCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 72 bp | GGATCAAATCAAGCCCTTCTGCATGCTGGGCAAGCCTaGTGTCATTTTTCCACTTCATGTGCGTCATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GSNQALLHAGQA*CHFSTSCASWR Trigger: TCGCCATGACGCACATGAAGTGGAAAAATGACACCAGGCTTGCCCAGCATGCAGAAGGGCTTGATTTGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 90 bp | GGTCTCACGTGCACTGTCACTAATGGTGGGGAAAGTTCTCAGGCCTaGCTGTCTCGCAGCTCTAAGTTGGTGCAAATGTTCTTTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: GLTCTVTNGGESSQA*LSRSSKLVQMFFHV Trigger: GACATGAAAGAACATTTGCACCAACTTAGAGCTGCGAGACAGCAAGGCCTGAGAACTTTCCCCACCATTAGTGACAGTGCACGTGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 72 bp | TCTGTTTCTTCCTCAAAGGCTGTGAGGGATGGCGATTaGTTTGTCGTCGTGATCAAACTCATCCGATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SVSSSKAVRDGD*FVVVIKLIRWP Trigger: CGGCCATCGGATGAGTTTGATCACGACGACAAACAAATCGCCATCCCTCACAGCCTTTGAGGAAGAAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 72 bp | TGCACTGTCACTAATGGTGGGGAAAGTTCTCAGGCCTaGCTGTCTCGCAGCTCTAAGTTGGTGCAAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: CTVTNGGESSQA*LSRSSKLVQMF Trigger: GAACATTTGCACCAACTTAGAGCTGCGAGACAGCAAGGCCTGAGAACTTTCCCCACCATTAGTGACAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 72 bp | GTGCCACATCAGCATGCGTGGCCTCTAACATTGCATTaGTCACCAGATTTCCAAGGTTGCTCTCACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VPHQHAWPLTLH*SPDFQGCSHIF Trigger: GAAGATGTGAGAGCAACCTTGGAAATCTGGTGACAAATGCAATGTTAGAGGCCACGCATGCTGATGTGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS TCA 72 bp | ATGAAGTATAGTCAAGTTATAGGAGTCCATGTCTCCTaGCTGGTTCCCCTGGGTTTGGGGAGAGAGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: MKYSQVIGVHVS*LVPLGLGREFF Trigger: GAAGAACTCTCTCCCCAAACCCAGGGGAACCAGTCAGGAGACATGGACTCCTATAACTTGACTATACTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 72 bp | GCAAGCTCTAAACATACTGTAGCCATCCTTCCCGTTTaGAATGTACTCCTTGATGGCCAGCAGATAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: ASSKHTVAILPV*NVLLDGQQIDF Trigger: AAAGTCTATCTGCTGGCCATCAAGGAGTACATTGCAAACGGGAAGGATGGCTACAGTATGTTTAGAGCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 90 bp | AATGGTGGGGAAAGTTCTCAGGCCTTGCTGTCTCGCAGCTCTAAGTaGGTGCAAATGTTCTTTCATGTCTGGAGAAATATGGAAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: NGGESSQALLSRSSK*VQMFFHVWRNMEDS Trigger: AGAATCTTCCATATTTCTCCAGACATGAAAGAACATTTGCACCAACTTAGAGCTGCGAGACAGCAAGGCCTGAGAACTTTCCCCACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 72 bp | CAAATCCAAATTCTAACCCAGCAACTTGAGGAAACCTaGCATCCAGAGCTGGGTACTTGTAAACCCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: QIQILTQQLEET*HPELGTCKPHF Trigger: AAAATGGGGTTTACAAGTACCCAGCTCTGGATGGCAGGTTTCCTCAAGTTGCTGGGTTAGAATTTGGATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CCA 72 bp | GGCGATTTGTTTGTCGTCGTGATCAAACTCATCCGATaGCCGGAAAGACACTTCTTCTTTCCTTGCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: GDLFVVVIKLIR*PERHFFFPCKI Trigger: AATTTTGCAAGGAAAGAAGAAGTGTCTTTCCGGCCATCGGATGAGTTTGATCACGACGACAAACAAATCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 90 bp | AGTCCCATTAAGCCAATTTTCCGATTGTTCCAGTTAACTATCTTTTaGACTGCACCATGCCCAAGAGGTTCAGATGTGAATCTGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: SPIKPIFRLFQLTIF*TAPCPRGSDVNLSW Trigger: CCATGACAGATTCACATCTGAACCTCTTGGGCATGGTGCAGTCAAAAAGATAGTTAACTGGAACAATCGGAAAATTGGCTTAATGGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 90 bp | TCAAGCCAGTCTTCTTCAACTAGTCCCATTAAGCCAATTTTCCGATaGTTCCAGTTAACTATCTTTTTGACTGCACCATGCCCAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSQSSSTSPIKPIFR*FQLTIFLTAPCPRG Trigger: ACCTCTTGGGCATGGTGCAGTCAAAAAGATAGTTAACTGGAACAATCGGAAAATTGGCTTAATGGGACTAGTTGAAGAAGACTGGCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 90 bp | CGTGATCAAACTCATCCGATGGCCGGAAAGACACTTCTTCTTTCCTaGCAAAATTTTTATGGATTCAAAGTGATTCATGACGACTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RDQTHPMAGKTLLLS*QNFYGFKVIHDDCR Trigger: TCTACAGTCGTCATGAATCACTTTGAATCCATAAAAATTTTGCAAGGAAAGAAGAAGTGTCTTTCCGGCCATCGGATGAGTTTGATCACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS GCA 72 bp | AATTTTCCGATTGTTCCAGTTAACTATCTTTTTGACTaGACCATGCCCAAGAGGTTCAGATGTGAATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: NFPIVPVNYLFD*TMPKRFRCESV Trigger: GACAGATTCACATCTGAACCTCTTGGGCATGGTGCAGTCAAAAAGATAGTTAACTGGAACAATCGGAAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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| CDS CAA 72 bp | TCTTCTTCAACTAGTCCCATTAAGCCAATTTTCCGATaGTTCCAGTTAACTATCTTTTTGACTGCACCATGC | + |
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Preference number: 6 (lower is better) Translates to: SSSTSPIKPIFR*FQLTIFLTAPC Trigger: GCATGGTGCAGTCAAAAAGATAGTTAACTGGAACAATCGGAAAATTGGCTTAATGGGACTAGTTGAAGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022232.6 |
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