RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NT5E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032420

Ensembl transcript IDs: ENSMUST00000034992.8

Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTGGGTATCTCTTaGGCCTCCCATAGGGCTCACTGTCCTGCTGGTCTTCTCATGTCT +
Preference number: 1 (lower is better)
Translates to: WCSVGTDHFISLGIS*ASHRAHCPAGLLMS
Trigger: AGACATGAGAAGACCAGCAGGACAGTGAGCCCTATGGGAGGCCCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 90 bp CCCAAAAGAAAGGGTACTATGGAAGGCAGAAACAGATTTGTTGTCTaGGACCAACCGCAGGAAGAGAGGAGACTTGACAGTAGGCGAGAG +
Preference number: 1 (lower is better)
Translates to: PKRKGTMEGRNRFVV*DQPQEERRLDSRRE
Trigger: CTCTCGCCTACTGTCAAGTCTCCTCTCTTCCTGCGGTTGGTCTCAGACAACAAATCTGTTTCTGCCTTCCATAGTACCCTTTCTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CCA 90 bp CTCCTTTCCCTTTCCTGCCTGTCCCTGACTGCCTTTTGCAGTCCCTaGACTAATCTATTATCTGCTGTATACAGTTTGTCTATGACTCAC +
Preference number: 1 (lower is better)
Translates to: LLSLSCLSLTAFCSP*TNLLSAVYSLSMTH
Trigger: GTGAGTCATAGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCAAAAGGCAGTCAGGGACAGGCAGGAAAGGGAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 90 bp ACTGAGTTGCTGGCCCCAACAAATGATGTTACAGTCTCTTCCTTGTaGAGAACATCTGCTAGGAACCTTGAGGATGATGAGTGCTGTTAC +
Preference number: 1 (lower is better)
Translates to: TELLAPTNDVTVSSL*RTSARNLEDDECCY
Trigger: GTAACAGCACTCATCATCCTCAAGGTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTGTAACATCATTTGTTGGGGCCAGCAACTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 90 bp AGGATGATGAGTGCTGTTACAAAGCCAGGTCTCCAGAGGCAGATATaGATATCACTGGAAGAAAAATGTAGTTTGACATCAAGGACAAGG +
Preference number: 1 (lower is better)
Translates to: RMMSAVTKPGLQRQI*ISLEEKCSLTSRTR
Trigger: CCTTGTCCTTGATGTCAAACTACATTTTTCTTCCAGTGATATTCATATCTGCCTCTGGAGACCTGGCTTTGTAACAGCACTCATCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR TCA 90 bp GACCACAGGCATGTGCCACCAGAGCTGGCGATGATGAAGTTGTATGTAAACATCCCTGTTGGTTCACTGTaGCTTTCTATCTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: DHRHVPPELAMMKLYVNIPVGSL*LSICSL
Trigger: CAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGG...GATGTTTACATACAACTTCATCATCGCCAGCTCTGGTGGCACATGCCTGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 90 bp AAGAGCCCAAAAGAAAGGGTACTATGGAAGGCAGAAACAGATTTGTaGTCTGAGACCAACCGCAGGAAGAGAGGAGACTTGACAGTAGGC +
Preference number: 2 (lower is better)
Translates to: KSPKERVLWKAETDL*SETNRRKRGDLTVG
Trigger: GCCTACTGTCAAGTCTCCTCTCTTCCTGCGGTTGGTCTCAGACAACAAATCTGTTTCTGCCTTCCATAGTACCCTTTCTTTTGGGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR TCA 90 bp CTGCCAGAAGGACCCTGTTGGTTCACTGTGACTTTCTATCTGCTCACTGAGTTGACAGTCTCTTCCTTGTaGAGAACATCTGCTAGGAAC +
Preference number: 2 (lower is better)
Translates to: LPEGPCWFTVTFYLLTELTVSSL*RTSARN
Trigger: GTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTGT...CAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGGGTCCTTCTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR TCA 90 bp TCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCCCCTGCCAAGTGCCGTaGCCACAGGCATGTGCCACC +
Preference number: 2 (lower is better)
Translates to: SVTSNIYVYHFLNSLLPSPCQVP*PQACAT
Trigger: GGTGGCACATGCCTGTGGTCACGGCACTTGGCAGGG...GGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CCA 90 bp CTATGCTCACTTGGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGGCACAGATGCCTTTTGCAGTCCCTaGACTAATCTATTATCTGCT +
Preference number: 2 (lower is better)
Translates to: LCSLGHRTVLVWCSVGTDAFCSP*TNLLSA
Trigger: AGCAGATAATAGATTAGTCCAGGGACTGCAAAAGGC...ATCTGTGCCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 90 bp ATGATGTTACAGTCTCTTCCTTGTGAAGAACATCTGCTAGGAACCTaGAGGATGATGAGTGCTGTTACAAAGCCAGGTCTCCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: MMLQSLPCEEHLLGT*RMMSAVTKPGLQRQ
Trigger: CTGCCTCTGGAGACCTGGCTTTGTAACAGCACTCATCATCCTCAAGGTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTGTAACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 90 bp AACAAGAGCCCAAAAGAAAGGGTACTATGGAAGGCAGAAACAGATTaGTTGTCTGAGACCAACCGCAGGAAGAGAGGAGACTTGACAGTA +
Preference number: 2 (lower is better)
Translates to: NKSPKERVLWKAETD*LSETNRRKRGDLTV
Trigger: TACTGTCAAGTCTCCTCTCTTCCTGCGGTTGGTCTCAGACAACAAATCTGTTTCTGCCTTCCATAGTACCCTTTCTTTTGGGCTCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR TCA 90 bp GACCACAGGCATGTGCCACCAGAGCTGGCGATGATGAAGTTGTATGTAAACATCCTCCAGAGGCAGATATaGATATCACTGGAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: DHRHVPPELAMMKLYVNILQRQI*ISLEEK
Trigger: TTTTTCTTCCAGTGATATTCATATCTGCCTCTGGAG...GATGTTTACATACAACTTCATCATCGCCAGCTCTGGTGGCACATGCCTGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR GCA 90 bp GACCACAGGCATGTGCCACCAGAGCTGGCGATGATGAAGTTGTATGTAAACATCTGTGTTATGTGGCTATaGAAGCTACATCTAGTTGTT +
Preference number: 2 (lower is better)
Translates to: DHRHVPPELAMMKLYVNICVMWL*KLHLVV
Trigger: AACAACTAGATGTAGCTTGCATAGCCACATAACACA...GATGTTTACATACAACTTCATCATCGCCAGCTCTGGTGGCACATGCCTGTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR GCA 90 bp TCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCCTGCCTGTCCCTGACTaGCTTTTGCAGTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: SVTSNIYVYHFLNSLLPSLPVPD*LLQSLD
Trigger: GTCCAGGGACTGCAAAAGGCAGTCAGGGACAGGCAG...GGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR TCA 90 bp GTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGATTTCCTGCCTGTCCCTaGCTGCCTTTTGCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: VTSNIYVYHFLNSLLPSRFPACP*LPFAVP
Trigger: AGGGACTGCAAAAGGCAGTCAGGGACAGGCAGGAAA...TCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 90 bp TGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGAATATTGGATaGTACATGTGTGACTTGAATGAGAGCCGTGTTGGCATCTTGGAC +
Preference number: 2 (lower is better)
Translates to: CIPLLKFTLAFQNIG*YMCDLNESRVGILD
Trigger: GTCCAAGATGCCAACACGGCTCTCATTCAAGTCACACATGTACAATCCAATATTCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CCA 90 bp GTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGAGAGAGGCAGGGCTTTTaGAGTCGCACAGGAGTTAAT +
Preference number: 2 (lower is better)
Translates to: VTSNIYVYHFLNSLLPSRERQGF*SRTGVN
Trigger: ATTAACTCCTGTGCGACTCCAAAAGCCCTGCCTCTC...TCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 90 bp TGTGCCACCAGAGCTGGCGATGATGAAGTTGTATGTAAACATCAATaGTTTGATGGATTAGAAATGAATAGAAAGGGAAATGGTAACCAG +
Preference number: 2 (lower is better)
Translates to: CATRAGDDEVVCKHQ*FDGLEMNRKGNGNQ
Trigger: CTGGTTACCATTTCCCTTTCTATTCATTTCTAATCCATCAAACAATTGATGTTTACATACAACTTCATCATCGCCAGCTCTGGTGGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CCA 90 bp ACAGTGGTTGTGTGGGATTTGAGTCTCAGTGACTTCAAACATTTATGTATACCAAAAGAAAGGGTACTATaGAAGGCAGAAACAGATTTG +
Preference number: 2 (lower is better)
Translates to: TVVVWDLSLSDFKHLCIPKERVL*KAETDL
Trigger: CAAATCTGTTTCTGCCTTCCATAGTACCCTTTCTTT...TGGTATACATAAATGTTTGAAGTCACTGAGACTCAAATCCCACACAACCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CCA 90 bp CACATTCAAAAAGAACTGAAGGCATTGTTTCACTGCAACAAACTTCATAAAAGGACCAGATGTGTTATGTaGCTATGCAAGCTACATCTA +
Preference number: 2 (lower is better)
Translates to: HIQKELKALFHCNKLHKRTRCVM*LCKLHL
Trigger: TAGATGTAGCTTGCATAGCCACATAACACATCTGGT...CCTTTTATGAAGTTTGTTGCAGTGAAACAATGCCTTCAGTTCTTTTTGAATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR TCA 90 bp CTCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCAAGAAAAATGTAGTTTaGCATCAAGGACAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: LSDFKHLCIPLLKFTLAFKKNVV*HQGQGD
Trigger: GTCTCCTTGTCCTTGATGTCAAACTACATTTTTCTT...GAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR GCA 90 bp CACATTCAAAAAGAACTGAAGGCATTGTTTCACTGCAACAAACTTCATAAAAGGTTTGGAGCCATGTTCTaGTCCTTAACTAGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: HIQKELKALFHCNKLHKRFGAMF*SLTSVY
Trigger: ATAAACACTAGTTAAGGAGCAGAACATGGCTCCAAA...CCTTTTATGAAGTTTGTTGCAGTGAAACAATGCCTTCAGTTCTTTTTGAATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 72 bp CCCACTCCCTGCCAGAAGGACCCTGTTGGTTCACTGTaGCTTTCTATCTGCTCACTGAGTTGCTGGCCCCAA +
Preference number: 3 (lower is better)
Translates to: PTPCQKDPVGSL*LSICSLSCWPQ
Trigger: TTGGGGCCAGCAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGGGTCCTTCTGGCAGGGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CCA 72 bp CTAGCTGACTGGCCTGAAACTCTACATATGTCAGGCTaGCCTAGAACTTGCAGCCATCCTCTCCTCCCTGCC +
Preference number: 3 (lower is better)
Translates to: LADWPETLHMSG*PRTCSHPLLPA
Trigger: GGCAGGGAGGAGAGGATGGCTGCAAGTTCTAGGCCAGCCTGACATATGTAGAGTTTCAGGCCAGTCAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CCA 72 bp TCTGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTaGGTATCTCTTGGGCCTCCCATAGGGCTCACTGTC +
Preference number: 3 (lower is better)
Translates to: SGVLWAQIISSV*VSLGPPIGLTV
Trigger: GACAGTGAGCCCTATGGGAGGCCCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CCA 72 bp TTTCCCCTTACCCACTCCCTGCCAGAAGGACCCTGTTaGTTCACTGTGACTTTCTATCTGCTCACTGAGTTG +
Preference number: 3 (lower is better)
Translates to: FPLTHSLPEGPC*FTVTFYLLTEL
Trigger: CAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGGGTCCTTCTGGCAGGGAGTGGGTAAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CAA 90 bp CTATGCTCACTTGGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGGCACAGATCATCTGCTAGGAACCTaGAGGATGATGAGTGCTGTT +
Preference number: 3 (lower is better)
Translates to: LCSLGHRTVLVWCSVGTDHLLGT*RMMSAV
Trigger: AACAGCACTCATCATCCTCAAGGTTCCTAGCAGATG...ATCTGTGCCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 72 bp GGCTCACTGTCCTGCTGGTCTTCTCATGTCTTGACCTaGGTATGCCTTACAGTGGTTGTGTGGGATTTGAGT +
Preference number: 3 (lower is better)
Translates to: GSLSCWSSHVLT*VCLTVVVWDLS
Trigger: ACTCAAATCCCACACAACCACTGTAAGGCATACTCAGGTCAAGACATGAGAAGACCAGCAGGACAGTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 72 bp CATAGGGCTCACTGTCCTGCTGGTCTTCTCATGTCTTaGCCTGAGTATGCCTTACAGTGGTTGTGTGGGATT +
Preference number: 3 (lower is better)
Translates to: HRAHCPAGLLMS*PEYALQWLCGI
Trigger: AATCCCACACAACCACTGTAAGGCATACTCAGGTCAAGACATGAGAAGACCAGCAGGACAGTGAGCCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CCA 72 bp ATTCTTAACTACTGTACAGTGCTGACTATGCTCACTTaGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: ILNYCTVLTMLT*SQDCLGLVFCG
Trigger: CCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAGTCAGCACTGTACAGTAGTTAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 72 bp CTGGCCCCAACAAATGATGTTACAGTCTCTTCCTTGTaGAGAACATCTGCTAGGAACCTTGAGGATGATGAG +
Preference number: 3 (lower is better)
Translates to: LAPTNDVTVSSL*RTSARNLEDDE
Trigger: CTCATCATCCTCAAGGTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTGTAACATCATTTGTTGGGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR TCA 72 bp TTGCCTTCCAGAATATTGGATTGTACATGTGTGACTTaGATGAGAGCCGTGTTGGCATCTTGGACAGGACAG +
Preference number: 3 (lower is better)
Translates to: LPSRILDCTCVT*MRAVLASWTGQ
Trigger: CTGTCCTGTCCAAGATGCCAACACGGCTCTCATTCAAGTCACACATGTACAATCCAATATTCTGGAAGGCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CCA 72 bp CTTTCCTGCCTGTCCCTGACTGCCTTTTGCAGTCCCTaGACTAATCTATTATCTGCTGTATACAGTTTGTCT +
Preference number: 3 (lower is better)
Translates to: LSCLSLTAFCSP*TNLLSAVYSLS
Trigger: AGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCAAAAGGCAGTCAGGGACAGGCAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CAA 90 bp TCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGCCGTGTTGGCATCTaGGACAGGACAGGTGCAGGT +
Preference number: 3 (lower is better)
Translates to: SVTSNIYVYHFLNSLLPSSRVGI*DRTGAG
Trigger: ACCTGCACCTGTCCTGTCCAAGATGCCAACACGGCT...GGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR GCA 72 bp GAAAGGGAAATGGTAACCAGATGTGTTATGTGGCTATaGAAGCTACATCTAGTTGTTTCCCCTTACCCACTC +
Preference number: 3 (lower is better)
Translates to: EREMVTRCVMWL*KLHLVVSPYPL
Trigger: GAGTGGGTAAGGGGAAACAACTAGATGTAGCTTGCATAGCCACATAACACATCTGGTTACCATTTCCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CAA 90 bp TGCAGTCCCTGGACTAATCTATTATCTGCTGTATACAGTTTGTCTATGACTCACAAGGCAGAAACAGATTaGTTGTCTGAGACCAACCGC +
Preference number: 3 (lower is better)
Translates to: CSPWTNLLSAVYSLSMTHKAETD*LSETNR
Trigger: GCGGTTGGTCTCAGACAACAAATCTGTTTCTGCCTT...GTGAGTCATAGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CAA 90 bp CTCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCTATCTGCTCACTGAGTaGCTGGCCCCAACAAATGAT +
Preference number: 3 (lower is better)
Translates to: LSDFKHLCIPLLKFTLAFYLLTE*LAPTND
Trigger: ATCATTTGTTGGGGCCAGCAACTCAGTGAGCAGATA...GAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CAA 90 bp TGCAGTCCCTGGACTAATCTATTATCTGCTGTATACAGTTTGTCTATGACTCACGAAGAAAAATGTAGTTaGACATCAAGGACAAGGAGA +
Preference number: 3 (lower is better)
Translates to: CSPWTNLLSAVYSLSMTHEEKCS*TSRTRR
Trigger: TCTCCTTGTCCTTGATGTCAAACTACATTTTTCTTC...GTGAGTCATAGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR GCA 72 bp TTGGAGATGTCTGACCTTGAACAAGTCGACCCTTTCTaGTTAGCTTATCATAAGACTTGTCTACAAAAATCT +
Preference number: 3 (lower is better)
Translates to: LEMSDLEQVDPF*LAYHKTCLQKS
Trigger: AGATTTTTGTAGACAAGTCTTATGATAAGCTAAGCAGAAAGGGTCGACTTGTTCAAGGTCAGACATCTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR-3UTR CAA 90 bp CACATTCAAAAAGAACTGAAGGCATTGTTTCACTGCAACAAACTTCATAAAAGGGGAATTTTAAACGGTTaGGGTCAAGAGTCCTTAATA +
Preference number: 3 (lower is better)
Translates to: HIQKELKALFHCNKLHKRGILNG*GQESLI
Trigger: TATTAAGGACTCTTGACCCAAACCGTTTAAAATTCC...CCTTTTATGAAGTTTGTTGCAGTGAAACAATGCCTTCAGTTCTTTTTGAATGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR TCA 90 bp CTGCCAGAAGGACCCTGTTGGTTCACTGTGACTTTCTATCTGCTCACTGAGTTGCCATGTTGCATTCCCTaGAGCGGCACGTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPEGPCWFTVTFYLLTELPCCIP*SGTSEW
Trigger: CCACTCAGACGTGCCGCTTCAGGGAATGCAACATGG...CAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGGGTCCTTCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp TGGCCTGAAACTCTACATATGTCAGGCTGGCCTAGAACTTGCAGCCATCCTCTCTGCACGTCGTTTGTGTaGAGGATCGTGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WPETLHMSGWPRTCSHPLCTSFV*RIVSSQ
Trigger: CTGGGAGCTCACGATCCTGCACACAAACGACGTGCA...GAGAGGATGGCTGCAAGTTCTAGGCCAGCCTGACATATGTAGAGTTTCAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp CTGCCAGAAGGACCCTGTTGGTTCACTGTGACTTTCTATCTGCTCACTGAGTTGGCAGGAACTCTCCGGTaGACTGGCCATAGCGATGCA +
Preference number: 4 (lower is better)
Translates to: LPEGPCWFTVTFYLLTELAGTLR*TGHSDA
Trigger: TGCATCGCTATGGCCAGTCCACCGGAGAGTTCCTGC...CAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGGGTCCTTCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp CTGCCAGAAGGACCCTGTTGGTTCACTGTGACTTTCTATCTGCTCACTGAGTTGTGGATTCCACCCACTTaGAGGAACTCTCCGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LPEGPCWFTVTFYLLTELWIPPT*RNSPVD
Trigger: GTCCACCGGAGAGTTCCTGCAAGTGGGTGGAATCCA...CAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGGGTCCTTCTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp TTGGTCTGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTGGGTATCTCTTGGAGCGGCACGTCTGAGTaGAGCCATCCAGGTAGACGA +
Preference number: 4 (lower is better)
Translates to: LVWCSVGTDHFISLGISWSGTSE*SHPGRR
Trigger: TCGTCTACCTGGATGGCTCCACTCAGACGTGCCGCT...CCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp CCTGCCAAGTGCCGTGACCACAGGCATGTGCCACCAGAGCTGGCGATGATGAAGCCAAAACATTTCATCTaGGTGTCTGAGGTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PAKCRDHRHVPPELAMMKPKHFI*VSEVVV
Trigger: AACAACAACCTCAGACACCCAGATGAAATGTTTTGG...CTTCATCATCGCCAGCTCTGGTGGCACATGCCTGTGGTCACGGCACTTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp TTGGTCTGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTGGGTATCTCTTGGTCCTTGCGGATCTGCTaGACCTTGGTAAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LVWCSVGTDHFISLGISWSLRIC*TLVKSR
Trigger: CCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGA...CCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCAGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp CTATGCTCACTTGGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGGCACAGATCTGCCGTCCATCATCTaGGGTGACTATGAATGGGTA +
Preference number: 4 (lower is better)
Translates to: LCSLGHRTVLVWCSVGTDLPSII*GDYEWV
Trigger: TACCCATTCATAGTCACCGCAGATGATGGACGGCAG...ATCTGTGCCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR TCA 90 bp CTATGCTCACTTGGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGGCACAGATATTTGTCCCTGGATTTaGGAGGAAAGGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LCSLGHRTVLVWCSVGTDICPWI*EERGFL
Trigger: AAGGAAACCCCTTTCCTCTCAAATCCAGGGACAAAT...ATCTGTGCCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp TGCAGTCCCTGGACTAATCTATTATCTGCTGTATACAGTTTGTCTATGACTCACGAGTCATCGCTGGTCTaGTCTAGCCGGCTGTGCACG +
Preference number: 4 (lower is better)
Translates to: CSPWTNLLSAVYSLSMTHESSLV*SSRLCT
Trigger: CGTGCACAGCCGGCTAGAGCAGACCAGCGATGACTC...GTGAGTCATAGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp ATGTTACAGTCTCTTCCTTGTGAAGAACATCTGCTAGGAACCTTGAGGATGATGTGGTGGAGTCATCGCTaGTCTGCTCTAGCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: MLQSLPCEEHLLGTLRMMWWSHR*SALAGC
Trigger: ACAGCCGGCTAGAGCAGACCAGCGATGACTCCACCA...CATCATCCTCAAGGTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTGTAACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp CTATGCTCACTTGGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGGCACAGATTGGGCACTCGACACTTaGTGCAGAGAACTTCTAATT +
Preference number: 4 (lower is better)
Translates to: LCSLGHRTVLVWCSVGTDWALDT*CRELLI
Trigger: AATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCA...ATCTGTGCCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp TTGGTCTGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTGGGTATCTCTTGGTTCATGATTTCCCAGTaGCATAGCATCGTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVWCSVGTDHFISLGISWFMISQ*HSIVAQ
Trigger: CTGGGCTACGATGCTATGGCACTGGGAAATCATGAA...CCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCAGACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp ATGTTACAGTCTCTTCCTTGTGAAGAACATCTGCTAGGAACCTTGAGGATGATGTGCGGTGACTATGAATaGGTACTTCCCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MLQSLPCEEHLLGTLRMMCGDYE*VLPRRH
Trigger: GTGCCTGCGGGGAAGTACCCATTCATAGTCACCGCA...CATCATCCTCAAGGTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTGTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 72 bp CAGTCTCTTCCTTGTGAAGAACATCTGCTAGGAACCTaGAGGATGATGAGTGCTGTTACAAAGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QSLPCEEHLLGT*RMMSAVTKPGL
Trigger: GAGACCTGGCTTTGTAACAGCACTCATCATCCTCAAGGTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR TCA 90 bp TCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCTTGTGTGCAGGATCGTaGGCTCCCAGGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVTSNIYVYHFLNSLLPSLCAGS*APRHWL
Trigger: CAGCCAGTGCCTGGGAGCTCACGATCCTGCACACAA...GGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 72 bp TGTTGGTTCACTGTGACTTTCTATCTGCTCACTGAGTaGCTGGCCCCAACAAATGATGTTACAGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CWFTVTFYLLTE*LAPTNDVTVSS
Trigger: GGAAGAGACTGTAACATCATTTGTTGGGGCCAGCAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp CTATGCTCACTTGGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGGCACAGATAGAGAGAACTTTAGATaGCAGAAAAAGTCCAGATAT +
Preference number: 4 (lower is better)
Translates to: LCSLGHRTVLVWCSVGTDRENFR*QKKSRY
Trigger: ATATCTGGACTTTTTCTGCCATCTAAAGTTCTCTCT...ATCTGTGCCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp TGCAGTCCCTGGACTAATCTATTATCTGCTGTATACAGTTTGTCTATGACTCACCCGCAGGCACTTCTTTaGAAGGTGGATTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CSPWTNLLSAVYSLSMTHPQALL*KVDFLC
Trigger: ACACAGGAAATCCACCTTCCAAAGAAGTGCCTGCGG...GTGAGTCATAGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp TTGGTCTGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTGGGTATCTCTTGGATGCACATGGACACGTaGTTCCAAAACATTTCATCT +
Preference number: 4 (lower is better)
Translates to: LVWCSVGTDHFISLGISWMHMDT*FQNISS
Trigger: AGATGAAATGTTTTGGAACCACGTGTCCATGTGCAT...CCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCAGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
3UTR CAA 72 bp GAGCCGTGTTGGCATCTTGGACAGGACAGGTGCAGGTaGAGAATTACAGTTTATTTTAGGAAGTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: EPCWHLGQDRCR*RITVYFRKFSH
Trigger: ATGAGAGAACTTCCTAAAATAAACTGTAATTCTCAACCTGCACCTGTCCTGTCCAAGATGCCAACACGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp CAGTTTATTTTAGGAAGTTCTCTCATGGCACCTCCATGTGAGGAAGAAGGAAGGGATGTTCATGAAGTGTaGCACTTCAAGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: QFILGSSLMAPPCEEEGRDVHEV*HFKAFV
Trigger: TACAAAGGCCTTGAAGTGGCACACTTCATGAACATC...CCTTCCTTCTTCCTCACATGGAGGTGCCATGAGAGAACTTCCTAAAATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp TTGGTCTGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTGGGTATCTCTTGGTACTTCAGGCTGCAATaGAGAGATTTCATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LVWCSVGTDHFISLGISWYFRLQ*RDFIFK
Trigger: TTTGAAGATGAAATCTCTGCATTGCAGCCTGAAGTA...CCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCAGACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp GTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGAATCCATCTCCACCGTTaGCCAGATAGCTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VTSNIYVYHFLNSLLPSRIHLHR*PDSLGG
Trigger: CCCTCCCAAGCTATCTGGCCAACGGTGGAGATGGAT...TCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp ATGTTACAGTCTCTTCCTTGTGAAGAACATCTGCTAGGAACCTTGAGGATGATGCCGCCCTTCAACGGCTaGGTAAACTACTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: MLQSLPCEEHLLGTLRMMPPFNG*VNYFHF
Trigger: AAAATGAAAGTAGTTTACCCAGCCGTTGAAGGGCGG...CATCATCCTCAAGGTTCCTAGCAGATGTTCTTCACAAGGAAGAGACTGTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp CACATTCAAAAAGAACTGAAGGCATTGTTTCACTGCAACAAACTTCATAAAAGGGGTAGCCCAGGTATTTaGCAAAGGCATAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HIQKELKALFHCNKLHKRGSPGI*QRHRPG
Trigger: TCCAGGCCTATGCCTTTGGCAAATACCTGGGCTACC...CCTTTTATGAAGTTTGTTGCAGTGAAACAATGCCTTCAGTTCTTTTTGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp CACATTCAAAAAGAACTGAAGGCATTGTTTCACTGCAACAAACTTCATAAAAGGATGGTGCCCTGGTACTaGTCTCCGGCATCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: HIQKELKALFHCNKLHKRMVPWY*SPASKN
Trigger: GTTTTTGGATGCCGGAGACCAGTACCAGGGCACCAT...CCTTTTATGAAGTTTGTTGCAGTGAAACAATGCCTTCAGTTCTTTTTGAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp TGCAGTCCCTGGACTAATCTATTATCTGCTGTATACAGTTTGTCTATGACTCACGTGGACCCTTTTAATTaGACGAGGTCAAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: CSPWTNLLSAVYSLSMTHVDPFN*TRSNVP
Trigger: AGGGACATTTGACCTCGTCCAATTAAAAGGGTCCAC...GTGAGTCATAGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp GTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGACAAGAGGCTCATAGATaGGCACTCGACACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: VTSNIYVYHFLNSLLPSRQEAHR*ALDTWC
Trigger: GCACCAAGTGTCGAGTGCCCATCTATGAGCCTCTTG...TCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR TCA 90 bp CTCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCCAGGTTCTCCCAGGTaGTGGTACCATTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSDFKHLCIPLLKFTLAFPGSPR*WYHCSS
Trigger: AGAAGAACAATGGTACCATCACCTGGGAGAACCTGG...GAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR GCA 90 bp CTCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCGCACTCGACACTTGGTaGAGAGAACTTCTAATTGGA +
Preference number: 4 (lower is better)
Translates to: LSDFKHLCIPLLKFTLAFALDTW*RELLIG
Trigger: TCCAATTAGAAGTTCTCTGCACCAAGTGTCGAGTGC...GAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp CTCAGTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCAAGCCTTCTTCAGGGTaGACCCTTTTAATTGGACGA +
Preference number: 4 (lower is better)
Translates to: LSDFKHLCIPLLKFTLAFKPSSG*TLLIGR
Trigger: TCGTCCAATTAAAAGGGTCCACCCTGAAGAAGGCTT...GAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp GTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGACGTTTACAATGCACATaGACACGTGGTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: VTSNIYVYHFLNSLLPSRRLQCT*TRGSKT
Trigger: TGTTTTGGAACCACGTGTCCATGTGCATTGTAAACG...TCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CCA 90 bp GTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGATCATCTTTTATCATCTaGAATCCATCTCCACCGTTG +
Preference number: 4 (lower is better)
Translates to: VTSNIYVYHFLNSLLPSRSSFII*NPSPPL
Trigger: CAACGGTGGAGATGGATTCCAGATGATAAAAGATGA...TCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 90 bp TGGTCTGCTCTAGCCGGCTGTGCACGTCGTTTGTGTGCAGGATCGTaGGCTCCCAGGCACTGGCTGCGGGCCACTGTGGTAGTAGAGCGC +
Preference number: 5 (lower is better)
Translates to: WSALAGCARRLCAGS*APRHWLRATVVVER
Trigger: GCGCTCTACTACCACAGTGGCCCGCAGCCAGTGCCTGGGAGCTCACGATCCTGCACACAAACGACGTGCACAGCCGGCTAGAGCAGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 90 bp GAGTCATCGCTGGTCTGCTCTAGCCGGCTGTGCACGTCGTTTGTGTaGAGGATCGTGAGCTCCCAGGCACTGGCTGCGGGCCACTGTGGT +
Preference number: 5 (lower is better)
Translates to: ESSLVCSSRLCTSFV*RIVSSQALAAGHCG
Trigger: ACCACAGTGGCCCGCAGCCAGTGCCTGGGAGCTCACGATCCTGCACACAAACGACGTGCACAGCCGGCTAGAGCAGACCAGCGATGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 90 bp CCGGCATCCAAAAACAGCACGTTGGGTTCTTCCTTGCGGATCTGCTaGACCTTGGTAAAGAGCCGGGCCACGCCGCCCACACACAGGCTG +
Preference number: 5 (lower is better)
Translates to: PASKNSTLGSSLRIC*TLVKSRATPPTHRL
Trigger: CAGCCTGTGTGTGGGCGGCGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGATGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 90 bp TTGAGGCACTTGGTGGAGTCATCGCTGGTCTGCTCTAGCCGGCTGTaGACGTCGTTTGTGTGCAGGATCGTGAGCTCCCAGGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LRHLVESSLVCSSRL*TSFVCRIVSSQALA
Trigger: AGCCAGTGCCTGGGAGCTCACGATCCTGCACACAAACGACGTGCACAGCCGGCTAGAGCAGACCAGCGATGACTCCACCAAGTGCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 90 bp ACACACAGGCTGGCGTTGAGGCACTTGGTGGAGTCATCGCTGGTCTaGTCTAGCCGGCTGTGCACGTCGTTTGTGTGCAGGATCGTGAGC +
Preference number: 5 (lower is better)
Translates to: THRLALRHLVESSLV*SSRLCTSFVCRIVS
Trigger: GCTCACGATCCTGCACACAAACGACGTGCACAGCCGGCTAGAGCAGACCAGCGATGACTCCACCAAGTGCCTCAACGCCAGCCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 90 bp TCTCCGGCATCCAAAAACAGCACGTTGGGTTCTTCCTTGCGGATCTaGTGCACCTTGGTAAAGAGCCGGGCCACGCCGCCCACACACAGG +
Preference number: 5 (lower is better)
Translates to: SPASKNSTLGSSLRI*CTLVKSRATPPTHR
Trigger: CCTGTGTGTGGGCGGCGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGATGCCGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp CTGGACCACAGGCACCTGCCGTCCATCATCTGCGGTGACTATGAATaGGTACTTCCCCGCAGGCACTTCTTTGGAAGGTGGATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LDHRHLPSIICGDYE*VLPRRHFFGRWISC
Trigger: ACAGGAAATCCACCTTCCAAAGAAGTGCCTGCGGGGAAGTACCCATTCATAGTCACCGCAGATGATGGACGGCAGGTGCCTGTGGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp CCTGCCAAGTGCCGTGACCACAGGCATGTGCCACCAGAGCTGGCGATGATGAAGATGGGCACTCGACACTaGGTGCAGAGAACTTCTAAT +
Preference number: 5 (lower is better)
Translates to: PAKCRDHRHVPPELAMMKMGTRH*VQRTSN
Trigger: ATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCAT...CTTCATCATCGCCAGCTCTGGTGGCACATGCCTGTGGTCACGGCACTTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 90 bp GTGTTGGAGTGTCCTCCCACCACGATGTCCACACCTCGAACTTTCTaGGCGATAAGTTTGTCCATCTCAAAACCAGAGTGCCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: VLECPPTTMSTPRTF*AISLSISKPECPRA
Trigger: CGCCCTGGGGCACTCTGGTTTTGAGATGGACAAACTTATCGCTCAGAAAGTTCGAGGTGTGGACATCGTGGTGGGAGGACACTCCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp TGCACGCTGTGCTCAAAAGCCTTCTTCAGGGTGGACCCTTTTAATTaGACGAGGTCAAATGTCCCTCCAAAGGGCAGCACAGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CTLCSKAFFRVDPFN*TRSNVPPKGSTAAR
Trigger: CCTGGCTGCTGTGCTGCCCTTTGGAGGGACATTTGACCTCGTCCAATTAAAAGGGTCCACCCTGAAGAAGGCTTTTGAGCACAGCGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp TATCGTACACCACATGGATTCCACCCACTTGCAGGAACTCTCCGGTaGACTGGCCATAGCGATGCACGCTGTGCTCAAAAGCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: YRTPHGFHPLAGTLR*TGHSDARCAQKPSS
Trigger: TGAAGAAGGCTTTTGAGCACAGCGTGCATCGCTATGGCCAGTCCACCGGAGAGTTCCTGCAAGTGGGTGGAATCCATGTGGTGTACGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp ACTGGCCATAGCGATGCACGCTGTGCTCAAAAGCCTTCTTCAGGGTaGACCCTTTTAATTGGACGAGGTCAAATGTCCCTCCAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: TGHSDARCAQKPSSG*TLLIGRGQMSLQRA
Trigger: TGCCCTTTGGAGGGACATTTGACCTCGTCCAATTAAAAGGGTCCACCCTGAAGAAGGCTTTTGAGCACAGCGTGCATCGCTATGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp TTGGTCTGGTGTTCTGTGGGCACAGATCATTTCATCAGTCTGGGTATCTCTTGGACACACAGGCTGGCGTaGAGGCACTTGGTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: LVWCSVGTDHFISLGISWTHRLA*RHLVES
Trigger: TGACTCCACCAAGTGCCTCAACGCCAGCCTGTGTGT...CCAAGAGATACCCAGACTGATGAAATGATCTGTGCCCACAGAACACCAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp CTGCCAGAAGGACCCTGTTGGTTCACTGTGACTTTCTATCTGCTCACTGAGTTGATGGATTCCACCCACTaGCAGGAACTCTCCGGTGGA +
Preference number: 5 (lower is better)
Translates to: LPEGPCWFTVTFYLLTELMDSTH*QELSGG
Trigger: TCCACCGGAGAGTTCCTGCAAGTGGGTGGAATCCAT...CAACTCAGTGAGCAGATAGAAAGTCACAGTGAACCAACAGGGTCCTTCTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 90 bp ATTTCCCAGTGCCATAGCATCGTAGCCCAGGATGTTCATGAAGTGTaGCACTTCAAGGCCTTTGTAAACGGTGAACCAGATGGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ISQCHSIVAQDVHEV*HFKAFVNGEPDGAL
Trigger: CAGGGCACCATCTGGTTCACCGTTTACAAAGGCCTTGAAGTGGCACACTTCATGAACATCCTGGGCTACGATGCTATGGCACTGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp CTATGCTCACTTGGTCACAGGACTGTCTTGGTCTGGTGTTCTGTGGGCACAGATTCTGGGTGTCTGAGGTaGTTGTTAATCATGGCATCA +
Preference number: 5 (lower is better)
Translates to: LCSLGHRTVLVWCSVGTDSGCLR*LLIMAS
Trigger: TGATGCCATGATTAACAACAACCTCAGACACCCAGA...ATCTGTGCCCACAGAACACCAGACCAAGACAGTCCTGTGACCAAGTGAGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 90 bp CCGCCAACAGAGAGAACTTTAGATGGCAGAAAAAGTCCAGATATCTaGTGTGCTAGAGGCCCCCGTGCCTTAATGTTTGCGCTCAGAATT +
Preference number: 5 (lower is better)
Translates to: PPTERTLDGRKSPDI*CARGPRALMFALRI
Trigger: AATTCTGAGCGCAAACATTAAGGCACGGGGGCCTCTAGCACATCAGATATCTGGACTTTTTCTGCCATCTAAAGTTCTCTCTGTTGGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 90 bp CTTTATCCATTTCAAGAGGCTCATAGATGGGCACTCGACACTTGGTaGAGAGAACTTCTAATTGGACCACTCTGTTCCAGGGCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: LYPFQEAHRWALDTW*RELLIGPLCSRAFG
Trigger: ACCGAAAGCCCTGGAACAGAGTGGTCCAATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCATCTATGAGCCTCTTGAAATGGATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp ACACTTTATCCATTTCAAGAGGCTCATAGATGGGCACTCGACACTTaGTGCAGAGAACTTCTAATTGGACCACTCTGTTCCAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TLYPFQEAHRWALDT*CRELLIGPLCSRAF
Trigger: GAAAGCCCTGGAACAGAGTGGTCCAATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCATCTATGAGCCTCTTGAAATGGATAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp CACATTCAAAAAGAACTGAAGGCATTGTTTCACTGCAACAAACTTCATAAAAGGCGGATCTGCTGCACCTaGGTAAAGAGCCGGGCCACG +
Preference number: 5 (lower is better)
Translates to: HIQKELKALFHCNKLHKRRICCT*VKSRAT
Trigger: CGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCG...CCTTTTATGAAGTTTGTTGCAGTGAAACAATGCCTTCAGTTCTTTTTGAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp GGAGGGTCACTTTATACACTTTATCCATTTCAAGAGGCTCATAGATaGGCACTCGACACTTGGTGCAGAGAACTTCTAATTGGACCACTC +
Preference number: 5 (lower is better)
Translates to: GGSLYTLYPFQEAHR*ALDTWCRELLIGPL
Trigger: GAGTGGTCCAATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCATCTATGAGCCTCTTGAAATGGATAAAGTGTATAAAGTGACCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp GACCACAGGCATGTGCCACCAGAGCTGGCGATGATGAAGTTGTATGTAAACATCCTTCAAAGACTAAATTaGTCCCTGGATTTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: DHRHVPPELAMMKLYVNILQRLN*SLDLRG
Trigger: TCCTCTCAAATCCAGGGACAAATTTAGTCTTTGAAG...GATGTTTACATACAACTTCATCATCGCCAGCTCTGGTGGCACATGCCTGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp ACAGTGGTTGTGTGGGATTTGAGTCTCAGTGACTTCAAACATTTATGTATACCAATCAGGTTTCCCATGTaGCATTCCCTGAAGCGGCAC +
Preference number: 5 (lower is better)
Translates to: TVVVWDLSLSDFKHLCIPIRFPM*HSLKRH
Trigger: GTGCCGCTTCAGGGAATGCAACATGGGAAACCTGAT...TGGTATACATAAATGTTTGAAGTCACTGAGACTCAAATCCCACACAACCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp TGCAGTCCCTGGACTAATCTATTATCTGCTGTATACAGTTTGTCTATGACTCACCGTTGGCCAGATAGCTaGGGAGGGTCACTTTATACA +
Preference number: 5 (lower is better)
Translates to: CSPWTNLLSAVYSLSMTHRWPDS*GGSLYT
Trigger: TGTATAAAGTGACCCTCCCAAGCTATCTGGCCAACG...GTGAGTCATAGACAAACTGTATACAGCAGATAATAGATTAGTCCAGGGACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 90 bp TTACTAAAGGAAAGCTTCCCTGGTAATGACTTGCTGCAGAGAACTTaGTCCGCCCTTCAACGGCTGGGTAAACTACTTTCATTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: LLKESFPGNDLLQRT*SALQRLGKLLSFLR
Trigger: TCTCAAAAATGAAAGTAGTTTACCCAGCCGTTGAAGGGCGGATCAAGTTCTCTGCAGCAAGTCATTACCAGGGAAGCTTTCCTTTAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp TCCGTTTACAATGCACATGGACACGTGGTTCCAAAACATTTCATCTaGGTGTCTGAGGTTGTTGTTAATCATGGCATCACAGATCAGGTT +
Preference number: 5 (lower is better)
Translates to: SVYNAHGHVVPKHFI*VSEVVVNHGITDQV
Trigger: AACCTGATCTGTGATGCCATGATTAACAACAACCTCAGACACCCAGATGAAATGTTTTGGAACCACGTGTCCATGTGCATTGTAAACGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp GTGACTTCAAACATTTATGTATACCACTTCTTAAATTCACTCTTGCCTTCCAGAACGTTGGGTTCTTCCTaGCGGATCTGCTGCACCTTG +
Preference number: 5 (lower is better)
Translates to: VTSNIYVYHFLNSLLPSRTLGSS*RICCTL
Trigger: CAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGT...TCTGGAAGGCAAGAGTGAATTTAAGAAGTGGTATACATAAATGTTTGAAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 90 bp ATCTTTTATCATCTGGAATCCATCTCCACCGTTGGCCAGATAGCTTaGGAGGGTCACTTTATACACTTTATCCATTTCAAGAGGCTCATA +
Preference number: 5 (lower is better)
Translates to: IFYHLESISTVGQIA*EGHFIHFIHFKRLI
Trigger: TATGAGCCTCTTGAAATGGATAAAGTGTATAAAGTGACCCTCCCAAGCTATCTGGCCAACGGTGGAGATGGATTCCAGATGATAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS-3UTR CAA 90 bp CACATTCAAAAAGAACTGAAGGCATTGTTTCACTGCAACAAACTTCATAAAAGGAATTTGTCCCTGGATTaGAGAGGAAAGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HIQKELKALFHCNKLHKRNLSLD*RGKGFP
Trigger: AGGAAACCCCTTTCCTCTCAAATCCAGGGACAAATT...CCTTTTATGAAGTTTGTTGCAGTGAAACAATGCCTTCAGTTCTTTTTGAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 72 bp GCCACGCCGCCCACACACAGGCTGGCGTTGAGGCACTaGGTGGAGTCATCGCTGGTCTGCTCTAGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: ATPPTHRLALRH*VESSLVCSSRL
Trigger: CAGCCGGCTAGAGCAGACCAGCGATGACTCCACCAAGTGCCTCAACGCCAGCCTGTGTGTGGGCGGCGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 72 bp AGAGCCGGGCCACGCCGCCCACACACAGGCTGGCGTTaGGGCACTTGGTGGAGTCATCGCTGGTCTGCTCTA +
Preference number: 6 (lower is better)
Translates to: RAGPRRPHTGWR*GTWWSHRWSAL
Trigger: TAGAGCAGACCAGCGATGACTCCACCAAGTGCCTCAACGCCAGCCTGTGTGTGGGCGGCGTGGCCCGGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp CTGGTCTGCTCTAGCCGGCTGTGCACGTCGTTTGTGTaGAGGATCGTGAGCTCCCAGGCACTGGCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: LVCSSRLCTSFV*RIVSSQALAAG
Trigger: GCCCGCAGCCAGTGCCTGGGAGCTCACGATCCTGCACACAAACGACGTGCACAGCCGGCTAGAGCAGACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 72 bp CTAGCCGGCTGTGCACGTCGTTTGTGTGCAGGATCGTaGGCTCCCAGGCACTGGCTGCGGGCCACTGTGGTA +
Preference number: 6 (lower is better)
Translates to: LAGCARRLCAGS*APRHWLRATVV
Trigger: TACCACAGTGGCCCGCAGCCAGTGCCTGGGAGCTCACGATCCTGCACACAAACGACGTGCACAGCCGGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 72 bp AGCACGTTGGGTTCTTCCTTGCGGATCTGCTGCACCTaGGTAAAGAGCCGGGCCACGCCGCCCACACACAGG +
Preference number: 6 (lower is better)
Translates to: STLGSSLRICCT*VKSRATPPTHR
Trigger: CCTGTGTGTGGGCGGCGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 90 bp TCCAAAAACAGCACGTTGGGTTCTTCCTTGCGGATCTGCTGCACCTaGGTAAAGAGCCGGGCCACGCCGCCCACACACAGGCTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: SKNSTLGSSLRICCT*VKSRATPPTHRLAL
Trigger: CAACGCCAGCCTGTGTGTGGGCGGCGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 90 bp TGGTACTGGTCTCCGGCATCCAAAAACAGCACGTTGGGTTCTTCCTaGCGGATCTGCTGCACCTTGGTAAAGAGCCGGGCCACGCCGCCC +
Preference number: 6 (lower is better)
Translates to: WYWSPASKNSTLGSS*RICCTLVKSRATPP
Trigger: GGGCGGCGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGATGCCGGAGACCAGTACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp TTGGTGGAGTCATCGCTGGTCTGCTCTAGCCGGCTGTaGACGTCGTTTGTGTGCAGGATCGTGAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LVESSLVCSSRL*TSFVCRIVSSQ
Trigger: CTGGGAGCTCACGATCCTGCACACAAACGACGTGCACAGCCGGCTAGAGCAGACCAGCGATGACTCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp TCCAAAAACAGCACGTTGGGTTCTTCCTTGCGGATCTaGTGCACCTTGGTAAAGAGCCGGGCCACGCCGCCC +
Preference number: 6 (lower is better)
Translates to: SKNSTLGSSLRI*CTLVKSRATPP
Trigger: GGGCGGCGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp ATAGGCCTGGACCACAGGCACCTGCCGTCCATCATCTaGGGTGACTATGAATGGGTACTTCCCCGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: IGLDHRHLPSII*GDYEWVLPRRH
Trigger: GTGCCTGCGGGGAAGTACCCATTCATAGTCACCGCAGATGATGGACGGCAGGTGCCTGTGGTCCAGGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp AAAAACAGCACGTTGGGTTCTTCCTTGCGGATCTGCTaGACCTTGGTAAAGAGCCGGGCCACGCCGCCCACA +
Preference number: 6 (lower is better)
Translates to: KNSTLGSSLRIC*TLVKSRATPPT
Trigger: TGTGGGCGGCGTGGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 90 bp CAGATGGTGCCCTGGTACTGGTCTCCGGCATCCAAAAACAGCACGTaGGGTTCTTCCTTGCGGATCTGCTGCACCTTGGTAAAGAGCCGG +
Preference number: 6 (lower is better)
Translates to: QMVPWYWSPASKNST*GSSLRICCTLVKSR
Trigger: CCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGATGCCGGAGACCAGTACCAGGGCACCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp AGGCACCTGCCGTCCATCATCTGCGGTGACTATGAATaGGTACTTCCCCGCAGGCACTTCTTTGGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: RHLPSIICGDYE*VLPRRHFFGRW
Trigger: CCACCTTCCAAAGAAGTGCCTGCGGGGAAGTACCCATTCATAGTCACCGCAGATGATGGACGGCAGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp CCACATGGATTCCACCCACTTGCAGGAACTCTCCGGTaGACTGGCCATAGCGATGCACGCTGTGCTCAAAAG +
Preference number: 6 (lower is better)
Translates to: PHGFHPLAGTLR*TGHSDARCAQK
Trigger: CTTTTGAGCACAGCGTGCATCGCTATGGCCAGTCCACCGGAGAGTTCCTGCAAGTGGGTGGAATCCATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 72 bp TCTCCGGCATCCAAAAACAGCACGTTGGGTTCTTCCTaGCGGATCTGCTGCACCTTGGTAAAGAGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: SPASKNSTLGSS*RICCTLVKSRA
Trigger: GGCCCGGCTCTTTACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGATGCCGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 72 bp CTCCAAAGGGCAGCACAGCAGCCAGGTTCTCCCAGGTaGTGGTACCATTGTTCTTCTCATCAATGGGGGACC +
Preference number: 6 (lower is better)
Translates to: LQRAAQQPGSPR*WYHCSSHQWGT
Trigger: GGTCCCCCATTGATGAGAAGAACAATGGTACCATCACCTGGGAGAACCTGGCTGCTGTGCTGCCCTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 72 bp CCCTGGTACTGGTCTCCGGCATCCAAAAACAGCACGTaGGGTTCTTCCTTGCGGATCTGCTGCACCTTGGTA +
Preference number: 6 (lower is better)
Translates to: PWYWSPASKNST*GSSLRICCTLV
Trigger: TACCAAGGTGCAGCAGATCCGCAAGGAAGAACCCAACGTGCTGTTTTTGGATGCCGGAGACCAGTACCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 72 bp TGGCATCACAGATCAGGTTTCCCATGTTGCATTCCCTaGAGCGGCACGTCTGAGTGGAGCCATCCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: WHHRSGFPCCIP*SGTSEWSHPGR
Trigger: TCTACCTGGATGGCTCCACTCAGACGTGCCGCTTCAGGGAATGCAACATGGGAAACCTGATCTGTGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp TATCATCAAACTCAACCTTCAGGTAGCCCAGGTATTTaGCAAAGGCATAGGCCTGGACCACAGGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: YHQTQPSGSPGI*QRHRPGPQAPA
Trigger: GGCAGGTGCCTGTGGTCCAGGCCTATGCCTTTGGCAAATACCTGGGCTACCTGAAGGTTGAGTTTGATGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp TGGGGGACCGGATGCCACCTCCGTTTACAATGCACATaGACACGTGGTTCCAAAACATTTCATCTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: WGTGCHLRLQCT*TRGSKTFHLGV
Trigger: GACACCCAGATGAAATGTTTTGGAACCACGTGTCCATGTGCATTGTAAACGGAGGTGGCATCCGGTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp TGGTACCATTGTTCTTCTCATCAATGGGGGACCGGATaGCACCTCCGTTTACAATGCACATGGACACGTGGT +
Preference number: 6 (lower is better)
Translates to: WYHCSSHQWGTG*HLRLQCTWTRG
Trigger: ACCACGTGTCCATGTGCATTGTAAACGGAGGTGGCATCCGGTCCCCCATTGATGAGAAGAACAATGGTACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp CTTTGGAAGGTGGATTTCCTGTGTAGAGAAAGGTGTTaGAGTGTCCTCCCACCACGATGTCCACACCTCGAA +
Preference number: 6 (lower is better)
Translates to: LWKVDFLCRERC*SVLPPRCPHLE
Trigger: TTCGAGGTGTGGACATCGTGGTGGGAGGACACTCCAACACCTTTCTCTACACAGGAAATCCACCTTCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp AGCGATGCACGCTGTGCTCAAAAGCCTTCTTCAGGGTaGACCCTTTTAATTGGACGAGGTCAAATGTCCCTC +
Preference number: 6 (lower is better)
Translates to: SDARCAQKPSSG*TLLIGRGQMSL
Trigger: GAGGGACATTTGACCTCGTCCAATTAAAAGGGTCCACCCTGAAGAAGGCTTTTGAGCACAGCGTGCATCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 72 bp TGTCCTCCCACCACGATGTCCACACCTCGAACTTTCTaGGCGATAAGTTTGTCCATCTCAAAACCAGAGTGC +
Preference number: 6 (lower is better)
Translates to: CPPTTMSTPRTF*AISLSISKPEC
Trigger: GCACTCTGGTTTTGAGATGGACAAACTTATCGCTCAGAAAGTTCGAGGTGTGGACATCGTGGTGGGAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp CATCAATGGGGGACCGGATGCCACCTCCGTTTACAATaGACATGGACACGTGGTTCCAAAACATTTCATCTG +
Preference number: 6 (lower is better)
Translates to: HQWGTGCHLRLQ*TWTRGSKTFHL
Trigger: CAGATGAAATGTTTTGGAACCACGTGTCCATGTGCATTGTAAACGGAGGTGGCATCCGGTCCCCCATTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp CGGATGCCACCTCCGTTTACAATGCACATGGACACGTaGTTCCAAAACATTTCATCTGGGTGTCTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: RMPPPFTMHMDT*FQNISSGCLRL
Trigger: CAACCTCAGACACCCAGATGAAATGTTTTGGAACCACGTGTCCATGTGCATTGTAAACGGAGGTGGCATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp TGCTCAAAAGCCTTCTTCAGGGTGGACCCTTTTAATTaGACGAGGTCAAATGTCCCTCCAAAGGGCAGCACA +
Preference number: 6 (lower is better)
Translates to: CSKAFFRVDPFN*TRSNVPPKGST
Trigger: TGTGCTGCCCTTTGGAGGGACATTTGACCTCGTCCAATTAAAAGGGTCCACCCTGAAGAAGGCTTTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp TGCCATAGCATCGTAGCCCAGGATGTTCATGAAGTGTaGCACTTCAAGGCCTTTGTAAACGGTGAACCAGAT +
Preference number: 6 (lower is better)
Translates to: CHSIVAQDVHEV*HFKAFVNGEPD
Trigger: ATCTGGTTCACCGTTTACAAAGGCCTTGAAGTGGCACACTTCATGAACATCCTGGGCTACGATGCTATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS GCA 72 bp TTTCAAGAGGCTCATAGATGGGCACTCGACACTTGGTaGAGAGAACTTCTAATTGGACCACTCTGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: FQEAHRWALDTW*RELLIGPLCSR
Trigger: CCTGGAACAGAGTGGTCCAATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCATCTATGAGCCTCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp ATGGGCACTCGACACTTGGTGCAGAGAACTTCTAATTaGACCACTCTGTTCCAGGGCTTTCGGTTAATATCG +
Preference number: 6 (lower is better)
Translates to: MGTRHLVQRTSN*TTLFQGFRLIS
Trigger: CGATATTAACCGAAAGCCCTGGAACAGAGTGGTCCAATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 72 bp GAGAGAACTTTAGATGGCAGAAAAAGTCCAGATATCTaGTGTGCTAGAGGCCCCCGTGCCTTAATGTTTGCG +
Preference number: 6 (lower is better)
Translates to: ERTLDGRKSPDI*CARGPRALMFA
Trigger: CGCAAACATTAAGGCACGGGGGCCTCTAGCACATCAGATATCTGGACTTTTTCTGCCATCTAAAGTTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp CATCTGGAATCCATCTCCACCGTTGGCCAGATAGCTTaGGAGGGTCACTTTATACACTTTATCCATTTCAAG +
Preference number: 6 (lower is better)
Translates to: HLESISTVGQIA*EGHFIHFIHFK
Trigger: CTTGAAATGGATAAAGTGTATAAAGTGACCCTCCCAAGCTATCTGGCCAACGGTGGAGATGGATTCCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 90 bp CAAAGACTAAATTTGTCCCTGGATTTGAGAGGAAAGGGGTTTCCTTaGAAGTATATCCAACAATCCCCACAACCTCACCGCCAACAGAGA +
Preference number: 6 (lower is better)
Translates to: QRLNLSLDLRGKGFP*KYIQQSPQPHRQQR
Trigger: TCTCTGTTGGCGGTGAGGTTGTGGGGATTGTTGGATATACTTCAAAGGAAACCCCTTTCCTCTCAAATCCAGGGACAAATTTAGTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 72 bp TCATCTGGAATCCATCTCCACCGTTGGCCAGATAGCTaGGGAGGGTCACTTTATACACTTTATCCATTTCAA +
Preference number: 6 (lower is better)
Translates to: SSGIHLHRWPDS*GGSLYTLYPFQ
Trigger: TTGAAATGGATAAAGTGTATAAAGTGACCCTCCCAAGCTATCTGGCCAACGGTGGAGATGGATTCCAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 90 bp CATCTTTTATCATCTGGAATCCATCTCCACCGTTGGCCAGATAGCTaGGGAGGGTCACTTTATACACTTTATCCATTTCAAGAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: HLLSSGIHLHRWPDS*GGSLYTLYPFQEAH
Trigger: ATGAGCCTCTTGAAATGGATAAAGTGTATAAAGTGACCCTCCCAAGCTATCTGGCCAACGGTGGAGATGGATTCCAGATGATAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp AATGCACATGGACACGTGGTTCCAAAACATTTCATCTaGGTGTCTGAGGTTGTTGTTAATCATGGCATCACA +
Preference number: 6 (lower is better)
Translates to: NAHGHVVPKHFI*VSEVVVNHGIT
Trigger: TGTGATGCCATGATTAACAACAACCTCAGACACCCAGATGAAATGTTTTGGAACCACGTGTCCATGTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp ATTCATCTTTTATCATCTGGAATCCATCTCCACCGTTaGCCAGATAGCTTGGGAGGGTCACTTTATACACTT +
Preference number: 6 (lower is better)
Translates to: IHLLSSGIHLHR*PDSLGGSLYTL
Trigger: AAGTGTATAAAGTGACCCTCCCAAGCTATCTGGCCAACGGTGGAGATGGATTCCAGATGATAAAAGATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS TCA 72 bp GTTTGTCCATCTCAAAACCAGAGTGCCCCAGGGCGATaGTCTTATTCACATTTAGCGTCTTTAGTTTATCTA +
Preference number: 6 (lower is better)
Translates to: VCPSQNQSAPGR*SYSHLASLVYL
Trigger: TAGATAAACTAAAGACGCTAAATGTGAATAAGATCATCGCCCTGGGGCACTCTGGTTTTGAGATGGACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CCA 72 bp CTTTATACACTTTATCCATTTCAAGAGGCTCATAGATaGGCACTCGACACTTGGTGCAGAGAACTTCTAATT +
Preference number: 6 (lower is better)
Translates to: LYTLYPFQEAHR*ALDTWCRELLI
Trigger: AATTAGAAGTTCTCTGCACCAAGTGTCGAGTGCCCATCTATGAGCCTCTTGAAATGGATAAAGTGTATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8
CDS CAA 72 bp TTATCTAATTTTATCCTCCATTGGTTAATGTCTGCTTaGATGGTCGCATCTTCAGGAATGCTGCTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: LSNFILHWLMSA*MVASSGMLLLR
Trigger: TCTCAACAGCAGCATTCCTGAAGATGCGACCATCAAAGCAGACATTAACCAATGGAGGATAAAATTAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034992.8