Pregenerated sensors for NT5DC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054027Ensembl transcript IDs: ENSMUST00000099396.3
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGATGGGGGAACTGGCCACAGGTAGGGCTGCTCCCTCAGGAACCTaGTTCCTGGTGTGCTGCAGATCACCACGCCCTTGCGGTCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: EMGELATGRAAPSGT*FLVCCRSPRPCGPQ Trigger: CTGGGGACCGCAAGGGCGTGGTGATCTGCAGCACACCAGGAAGCAGGTTCCTGAGGGAGCAGCCCTACCTGTGGCCAGTTCCCCCATCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 90 bp | CTTCCTGCAGGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTTaGATGTCTGGTGCGACAGCCTCGCTGATCCCAGTACTGCCACGC | + |
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Preference number: 1 (lower is better) Translates to: LPAGMPCQPCSQITV*MSGATASLIPVLPR Trigger: GCGTGGCAGTACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCCTGCAGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR TCA 90 bp | ATGCATGCACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATTaGGTCCAAGGCCAGCCCAGGCTCCAAAGCAAGACCCTACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: MHAHTHSCRRLRPED*VQGQPRLQSKTLPG Trigger: CCCAGGTAGGGTCTTGCTTTGGAGCCTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCATGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 90 bp | GATGCCGTGCCAGCCATGCAGCCAGATCACAGTTTGCATGTCTGGTaGGACAGCCTCGCTGATCCCAGTACTGCCACGCTTGGAGACCTC | + |
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Preference number: 1 (lower is better) Translates to: DAVPAMQPDHSLHVW*DSLADPSTATLGDL Trigger: GAGGTCTCCAAGCGTGGCAGTACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CCA 90 bp | AGGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTTGCATGTCTaGTGCGACAGCCTCGCTGATCCCAGTACTGCCACGCTTGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: RDAVPAMQPDHSLHV*CDSLADPSTATLGD Trigger: GTCTCCAAGCGTGGCAGTACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 90 bp | GACTGGAGACAAAAGTGTCATGCAGGAAGGCCTTCTGAGGGACACTaGTGGGATGGACACCTGGGAGGGGAAGACCAGTTGTTGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: DWRQKCHAGRPSEGH*WDGHLGGEDQLLQG Trigger: GCCCTGCAACAACTGGTCTTCCCCTCCCAGGTGTCCATCCCAGCAGTGTCCCTCAGAAGGCCTTCCTGCATGACACTTTTGTCTCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR TCA 90 bp | CTTTACACTTCTGCATGCATGCACACACACACAGTTGCAGGAGGCTaGGGCCGGAGGATTGAGTCCAAGGCCAGCCCAGGCTCCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LYTSACMHTHTVAGG*GRRIESKASPGSKA Trigger: TGCTTTGGAGCCTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCATGCATGCAGAAGTGTAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 90 bp | CAGCATTACAGTGAATGCTGCACAGCTCCGTTAGCTTCTGCACATTaGCAGGCAGTCAGCAACCGGCCAAGGGAGCAGCCCTCAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: QHYSECCTAPLASAH*QAVSNRPREQPSTA Trigger: AGCTGTTGAGGGCTGCTCCCTTGGCCGGTTGCTGACTGCCTGGCAATGTGCAGAAGCTAACGGAGCTGTGCAGCATTCACTGTAATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 90 bp | GATGAGGACAGTAACAGGGAAAACGCCCCATTCTTCCTGCAGGGATaGCGTGCCAGCCATGCAGCCAGATCACAGTTTGCATGTCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: DEDSNRENAPFFLQG*RASHAARSQFACLV Trigger: CACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCCTGCAGGAAGAATGGGGCGTTTTCCCTGTTACTGTCCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR TCA 90 bp | TTCACAGGGAACAGTCATGGAATATACACCCCCAGGAAAGGCATGTaGTCTGGGGCAAGGCAGAGAAACCCATCAGCCGGCCACACTCCA | + |
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Preference number: 1 (lower is better) Translates to: FTGNSHGIYTPRKGM*SGARQRNPSAGHTP Trigger: TGGAGTGTGGCCGGCTGATGGGTTTCTCTGCCTTGCCCCAGATCACATGCCTTTCCTGGGGGTGTATATTCCATGACTGTTCCCTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 90 bp | TATCCAAACTGGAAGGCTGCTCCACTGGCTCTAAGCAGAGAATCTTaGCATCCCAGCCTGAGGCAGCAAGCCACACCCTGTGCTGATGAA | + |
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Preference number: 1 (lower is better) Translates to: YPNWKAAPLALSRES*HPSLRQQATPCADE Trigger: TTCATCAGCACAGGGTGTGGCTTGCTGCCTCAGGCTGGGATGGCAAGATTCTCTGCTTAGAGCCAGTGGAGCAGCCTTCCAGTTTGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CCA 90 bp | GTCTGGGATCTGACCAAATCAGCAGCAGGTGTACTAATGGTGAAGTaGGGAGCACGACAGAGACAGACATGGGTAGACAGCCAAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: VWDLTKSAAGVLMVK*GARQRQTWVDSQRR Trigger: CCTCCTTTGGCTGTCTACCCATGTCTGTCTCTGTCGTGCTCCCCACTTCACCATTAGTACACCTGCTGCTGATTTGGTCAGATCCCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CCA 90 bp | ATAAATGAGAGGGCTGATGTGTTCAAAGCAACCTATAATTTAGTCTaGGATCTGACCAAATCAGCAGCAGGTGTACTAATGGTGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: INERADVFKATYNLV*DLTKSAAGVLMVKW Trigger: CCACTTCACCATTAGTACACCTGCTGCTGATTTGGTCAGATCCCAGACTAAATTATAGGTTGCTTTGAACACATCAGCCCTCTCATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 90 bp | AAATTCACATTCCGAATAAATAGTAAACCTACTTTGTATTTATTGTaGCTGATACCACACAGGCACAGTCATCCCACGACACGAAACAGT | + |
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Preference number: 1 (lower is better) Translates to: KFTFRINSKPTLYLL*LIPHRHSHPTTRNS Trigger: ACTGTTTCGTGTCGTGGGATGACTGTGCCTGTGTGGTATCAGGCACAATAAATACAAAGTAGGTTTACTATTTATTCGGAATGTGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CAA 90 bp | CATGCATGCACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATaGAGTCCAAGGCCAGCCCAGGCTCCAAAGCAAGACCCTACCTGG | + |
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Preference number: 2 (lower is better) Translates to: HACTHTQLQEAEAGG*SPRPAQAPKQDPTW Trigger: CCAGGTAGGGTCTTGCTTTGGAGCCTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCATGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CAA 90 bp | TCTTCCTGCAGGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTaGCATGTCTGGTGCGACAGCCTCGCTGATCCCAGTACTGCCACG | + |
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Preference number: 2 (lower is better) Translates to: SSCRDAVPAMQPDHS*HVWCDSLADPSTAT Trigger: CGTGGCAGTACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCCTGCAGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | GGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTTGCATGTCTGGTGCGACAGCACACACACACAGTTaGAGGAGGCTGAGGCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: GMPCQPCSQITVCMSGATAHTHS*RRLRPE Trigger: CTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGC...TGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACCAGTTGTTGCAGGGCAAGCACAGGAAGGTCTTAGGAGCCCCAAAGGGCCACACTCCAGCCCCTaGGATGAGCCGGCCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRPVVAGQAQEGLRSPKGPHSSP*DEPAFS Trigger: ACTGAAGGCCGGCTCATCCCAGGGGCTGGAGTGTGG...CCCTTTGGGGCTCCTAAGACCTTCCTGTGCTTGCCCTGCAACAACTGGTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CAA 90 bp | TCTGAGGGACACTGCTGGGATGGACACCTGGGAGGGGAAGACCAGTaGTTGCAGGGCAAGCACAGGAAGGTCTTAGGAGCCCCAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SEGHCWDGHLGGEDQ*LQGKHRKVLGAPKG Trigger: TCCCTTTGGGGCTCCTAAGACCTTCCTGTGCTTGCCCTGCAACAACTGGTCTTCCCCTCCCAGGTGTCCATCCCAGCAGTGTCCCTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACCAGTTGTTGCAGGGCAAGCACAGGAAGGTCTTAGGAGCCCCAAAGGGCTGCCTGACCCTCTGTaGGGCCACGAATGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GRPVVAGQAQEGLRSPKGLPDPL*GHECFW Trigger: CCAGAAGCATTCGTGGCCTCACAGAGGGTCAGGCAG...CCCTTTGGGGCTCCTAAGACCTTCCTGTGCTTGCCCTGCAACAACTGGTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACCAGTTGTTGCAGGGCAAGCACAGGAAGGTCTTAGGAGCCCCAAAGGGAGATCACCACGCCCTTaGGGTCCCCAGTGCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GRPVVAGQAQEGLRSPKGRSPRP*GPQCCL Trigger: CAAGCAGCACTGGGGACCGCAAGGGCGTGGTGATCT...CCCTTTGGGGCTCCTAAGACCTTCCTGTGCTTGCCCTGCAACAACTGGTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CAA 90 bp | GTCCTGCCTTTCTTTACACTTCTGCATGCATGCACACACACACAGTaGCAGGAGGCTGAGGCCGGAGGATTGAGTCCAAGGCCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VLPFFTLLHACTHTQ*QEAEAGGLSPRPAQ Trigger: CTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCATGCATGCAGAAGTGTAAAGAAAGGCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACCAGTTGTTGCAGGGCAAGCACAGGAAGGTCTTAGGAGCCCCAAAGGGTCAGGAGGGAAAGAATaGATCGGCTCCCTAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GRPVVAGQAQEGLRSPKGSGGKE*IGSLSS Trigger: GCTGCTTAGGGAGCCGATCCATTCTTTCCCTCCTGA...CCCTTTGGGGCTCCTAAGACCTTCCTGTGCTTGCCCTGCAACAACTGGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR CCA 90 bp | CATCCGGGCAGCATGCATCCTTTTAGGACCCTGACACTGAGCAGCTGCCAAAACGTGACAAGGCTAATCTaGCCACGAGCACTTTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: HPGSMHPFRTLTLSSCQNVTRLI*PRALSW Trigger: CCACGAAAGTGCTCGTGGCCAGATTAGCCTTGTCAC...GTTTTGGCAGCTGCTCAGTGTCAGGGTCCTAAAAGGATGCATGCTGCCCGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | CTTATCCCAACACACTGTGGGGGCAGAGGCAAGCAGATCTCTATAAGTTTGAGGTCTGGGAAGCAACTCTaGGGCTGCCTGACCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LIPTHCGGRGKQISISLRSGKQL*GCLTLC Trigger: ACAGAGGGTCAGGCAGCCTCAGAGTTGCTTCCCAGA...CCTCAAACTTATAGAGATCTGCTTGCCTCTGCCCCCACAGTGTGTTGGGATAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACCAGTTGTTGCAGGGCAAGCACAGGAAGGTCTTAGGAGCCCCAAAGGGATGGGAAAATGTCCTTaGAAGCCTAGGACCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GRPVVAGQAQEGLRSPKGMGKCP*KPRTRR Trigger: TCTCCTGGTCCTAGGCTTTCAAGGACATTTTCCCAT...CCCTTTGGGGCTCCTAAGACCTTCCTGTGCTTGCCCTGCAACAACTGGTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATTGAGTCCAAGGCCAGCCCATTCCAGGAGGCTGTaGATTTTATGGGAAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: THTQLQEAEAGGLSPRPAHSRRL*ILWENV Trigger: GACATTTTCCCATAAAATTCACAGCCTCCTGGAATG...GGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | GACCCCAGCCAAGAGTCCCAGGGACAAGCTAAAACTTGTCCTGGCTACACTAGACACAAGAGCACAAAATaGGTCAGGCCAGGTGACAAG | + |
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Preference number: 2 (lower is better) Translates to: DPSQESQGQAKTCPGYTRHKSTK*VRPGDK Trigger: CTTGTCACCTGGCCTGACTCATTTTGTGCTCTTGTG...TCTAGTGTAGCCAGGACAAGTTTTAGCTTGTCCCTGGGACTCTTGGCTGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | GTGACAAATGCTTCCTGTTTTCCCTCAACAAAGTCATTCCAGGAGGCTGTGAATCAGGCGGCCAGCTCCTaGCTCAACCTGGACAGGACA | + |
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Preference number: 2 (lower is better) Translates to: VTNASCFPSTKSFQEAVNQAASS*LNLDRT Trigger: TGTCCTGTCCAGGTTGAGGCAGGAGCTGGCCGCCTG...ATTCACAGCCTCCTGGAATGACTTTGTTGAGGGAAAACAGGAAGCATTTGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR CCA 90 bp | GCTAACACACAGCATTACAGTGAATGCTGCACAGCTCCGTTAGCTTCTGCACATTTCAACACTGTTGTGTaGAGAAGGGCCGGGAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: ANTQHYSECCTAPLASAHFNTVV*RRAGRP Trigger: GGGCCTCCCGGCCCTTCTCCACACAACAGTGTTGAA...ATGTGCAGAAGCTAACGGAGCTGTGCAGCATTCACTGTAATGCTGTGTGTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCACTGTGACAAATGCTTCCTGTTTTCCCTCAACAAAGTCATTCCAGGAACCTGCTTCCTGGTGTaGTGCAGATCACCACGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QSHCDKCFLFSLNKVIPGTCFLV*CRSPRP Trigger: AGGGCGTGGTGATCTGCAGCACACCAGGAAGCAGGT...TCCTGGAATGACTTTGTTGAGGGAAAACAGGAAGCATTTGTCACAGTGGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAGCGGCAACCAGAATGGCCTGCAAAGCTGAAAATGGTTCCCTTATTAGAATGCCGTGCCAGCCATaGAGCCAGATCACAGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: TEAATRMACKAENGSLIRMPCQP*SQITVC Trigger: GCAAACTGTGATCTGGCTGCATGGCTGGCACGGCAT...TCTAATAAGGGAACCATTTTCAGCTTTGCAGGCCATTCTGGTTGCCGCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCGGCAACCAGAATGGCCTGCAAAGCTGAAAATGGTTCCCTTATTAGACACCCATCACCCCTTTaGGGCAGACAAAGCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: TEAATRMACKAENGSLIRHPSPL*GRQSHC Trigger: ACAGTGGCTTTGTCTGCCCCAAAGGGGTGATGGGTG...TCTAATAAGGGAACCATTTTCAGCTTTGCAGGCCATTCTGGTTGCCGCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | AACAAAGTCATTCCAGGAGGCTGTGAATTTTATGGGAAAATGTCCTTGAAAGCCAACTCTGAGGCTGCCTaGCCCTCTGTGAGGCCACGA | + |
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Preference number: 2 (lower is better) Translates to: NKVIPGGCEFYGKMSLKANSEAA*PSVRPR Trigger: TCGTGGCCTCACAGAGGGTCAGGCAGCCTCAGAGTT...GGCTTTCAAGGACATTTTCCCATAAAATTCACAGCCTCCTGGAATGACTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCTCAACAAAGTCATTCCAGGAGGCTGTGAATTTTATGGGAAAATGTCCTGCTCCCTCAGGAACCTaGTTCCTGGTGTGCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FPSTKSFQEAVNFMGKCPAPSGT*FLVCCR Trigger: TCTGCAGCACACCAGGAAGCAGGTTCCTGAGGGAGC...AGGACATTTTCCCATAAAATTCACAGCCTCCTGGAATGACTTTGTTGAGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | ACAATCAGATGTAATCAAGGATTCATCCCTCCAGAGGGGGAAGGACAGAAGCAAACAGCGAGCTGTCTGTaGTGGATGTCTAACACACAG | + |
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Preference number: 2 (lower is better) Translates to: TIRCNQGFIPPEGEGQKQTASCL*WMSNTQ Trigger: CTGTGTGTTAGACATCCAGCACAGACAGCTCGCTGT...TTGCTTCTGTCCTTCCCCCTCTGGAGGGATGAATCCTTGATTACATCTGATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR GCA 90 bp | CTTATCCCAACACACTGTGGGGGCAGAGGCAAGCAGATCTCTATAAGTTTGAGGCTTTACACTTCTGCATaGATGCACACACACACAGTT | + |
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Preference number: 2 (lower is better) Translates to: LIPTHCGGRGKQISISLRLYTSA*MHTHTV Trigger: AACTGTGTGTGTGTGCATGCATGCAGAAGTGTAAAG...CCTCAAACTTATAGAGATCTGCTTGCCTCTGCCCCCACAGTGTGTTGGGATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAGATGTAATCAAGGATTCATCCCTCCAGAGGGGGAAGGACAGAAGCAAGTCCAAAACACTGGCTaGAAGGCAATTTTAGTGCGA | + |
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Preference number: 2 (lower is better) Translates to: TIRCNQGFIPPEGEGQKQVQNTG*KAILVR Trigger: TCGCACTAAAATTGCCTTTCAGCCAGTGTTTTGGAC...TTGCTTCTGTCCTTCCCCCTCTGGAGGGATGAATCCTTGATTACATCTGATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTCACTTCTCCCTCATTGCAATAAATGAGAGGGCTGATGTGTTCAAAGCACAGACAAAGCCACTGTaGCAAATGCTTCCTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: AFHFSLIAINERADVFKAQTKPL*QMLPVF Trigger: GAAAACAGGAAGCATTTGTCACAGTGGCTTTGTCTG...TGCTTTGAACACATCAGCCCTCTCATTTATTGCAATGAGGGAGAAGTGAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGATGTGTTCAAAGCAACCTATAATTTAGTCTGGGATCTGACCAAATCAGCACACAAGTCTCCGTCATaGTCCTGCCTTTCTTTACAC | + |
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Preference number: 2 (lower is better) Translates to: ADVFKATYNLVWDLTKSAHKSPS*SCLSLH Trigger: GTGTAAAGAAAGGCAGGACCATGACGGAGACTTGTG...TGCTGATTTGGTCAGATCCCAGACTAAATTATAGGTTGCTTTGAACACATCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CAA 90 bp | AGCAAATTCACATTCCGAATAAATAGTAAACCTACTTTGTATTTATaGTGCCTGATACCACACAGGCACAGTCATCCCACGACACGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SKFTFRINSKPTLYL*CLIPHRHSHPTTRN Trigger: GTTTCGTGTCGTGGGATGACTGTGCCTGTGTGGTATCAGGCACAATAAATACAAAGTAGGTTTACTATTTATTCGGAATGTGAATTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTTTTCACTTCTCCCTCATTGCAATAAATGAGAGGGCTGATGTGTTCAAATCGCTACCTCAATCTTaGGTAAATAAACCCTCGAAA | + |
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Preference number: 2 (lower is better) Translates to: RAFHFSLIAINERADVFKSLPQS*VNKPSK Trigger: TTTCGAGGGTTTATTTACTCAAGATTGAGGTAGCGA...TTTGAACACATCAGCCCTCTCATTTATTGCAATGAGGGAGAAGTGAAAAGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 72 bp | AGGGCTGCTCCCTCAGGAACCTGCTTCCTGGTGTGCTaGAGATCACCACGCCCTTGCGGTCCCCAGTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: RAAPSGTCFLVC*RSPRPCGPQCC Trigger: GCAGCACTGGGGACCGCAAGGGCGTGGTGATCTGCAGCACACCAGGAAGCAGGTTCCTGAGGGAGCAGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CCA 72 bp | CCACAGGTAGGGCTGCTCCCTCAGGAACCTGCTTCCTaGTGTGCTGCAGATCACCACGCCCTTGCGGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: PQVGLLPQEPAS*CAADHHALAVP Trigger: GGGGACCGCAAGGGCGTGGTGATCTGCAGCACACCAGGAAGCAGGTTCCTGAGGGAGCAGCCCTACCTGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR CCA 72 bp | GCAGAGAAACCCATCAGCCGGCCACACTCCAGCCCCTaGGATGAGCCGGCCTTCAGTCCTGGGTCCAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: AEKPISRPHSSP*DEPAFSPGSSR Trigger: TCTGCTGGACCCAGGACTGAAGGCCGGCTCATCCCAGGGGCTGGAGTGTGGCCGGCTGATGGGTTTCTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR GCA 72 bp | GAACTGGCCACAGGTAGGGCTGCTCCCTCAGGAACCTaGTTCCTGGTGTGCTGCAGATCACCACGCCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: ELATGRAAPSGT*FLVCCRSPRPC Trigger: GCAAGGGCGTGGTGATCTGCAGCACACCAGGAAGCAGGTTCCTGAGGGAGCAGCCCTACCTGTGGCCAGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| 3UTR TCA 72 bp | CACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATTaGGTCCAAGGCCAGCCCAGGCTCCAAAGCAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: HTHSCRRLRPED*VQGQPRLQSKT Trigger: GGTCTTGCTTTGGAGCCTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR TCA 72 bp | TCTGCATGCATGCACACACACACAGTTGCAGGAGGCTaGGGCCGGAGGATTGAGTCCAAGGCCAGCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SACMHTHTVAGG*GRRIESKASPG Trigger: GCCTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCATGCATGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | TGGAGAAGGGCCGGGAGGCCCCAGGCGGCCAGCTCCTaGCTCAACCTGGACAGGACAGTATTCATAGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: WRRAGRPQAASS*LNLDRTVFIVR Trigger: TCTTACTATGAATACTGTCCTGTCCAGGTTGAGGCAGGAGCTGGCCGCCTGGGGCCTCCCGGCCCTTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | AGTGAATGCTGCACAGCTCCGTTAGCTTCTGCACATTaGCAGGCAGTCAGCAACCGGCCAAGGGAGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SECCTAPLASAH*QAVSNRPREQP Trigger: GGGCTGCTCCCTTGGCCGGTTGCTGACTGCCTGGCAATGTGCAGAAGCTAACGGAGCTGTGCAGCATTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | GGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTTaGATGTCTGGTGCGACAGCCTCGCTGATCCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GMPCQPCSQITV*MSGATASLIPV Trigger: TACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | GTGCCAGCCATGCAGCCAGATCACAGTTTGCATGTCTaGTGCGACAGCCTCGCTGATCCCAGTACTGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: VPAMQPDHSLHV*CDSLADPSTAT Trigger: CGTGGCAGTACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | CCAGCCATGCAGCCAGATCACAGTTTGCATGTCTGGTaGGACAGCCTCGCTGATCCCAGTACTGCCACGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PAMQPDHSLHVW*DSLADPSTATL Trigger: AAGCGTGGCAGTACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | TGGAAGGCTGCTCCACTGGCTCTAAGCAGAGAATCTTaGCATCCCAGCCTGAGGCAGCAAGCCACACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WKAAPLALSRES*HPSLRQQATPC Trigger: ACAGGGTGTGGCTTGCTGCCTCAGGCTGGGATGGCAAGATTCTCTGCTTAGAGCCAGTGGAGCAGCCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTATCCCAACACACTGTGGGGGCAGAGGCAAGCAGATCTCTATAAGTTTGAGGGCTGAGGCCGGAGGATaGAGTCCAAGGCCAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LIPTHCGGRGKQISISLRAEAGG*SPRPAQ Trigger: CTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGC...CCTCAAACTTATAGAGATCTGCTTGCCTCTGCCCCCACAGTGTGTTGGGATAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR-3UTR CAA 90 bp | GACCCCAGCCAAGAGTCCCAGGGACAAGCTAAAACTTGTCCTGGCTACACTAGATGCACACACACACAGTaGCAGGAGGCTGAGGCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: DPSQESQGQAKTCPGYTRCTHTQ*QEAEAG Trigger: TCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCA...TCTAGTGTAGCCAGGACAAGTTTTAGCTTGTCCCTGGGACTCTTGGCTGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR TCA 72 bp | GCGCATCTGACTCTGGGAAGCAACTCTGAGGCTGCCTaGCCCTCTGTGAGGCCACGAATGCTTCTGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AHLTLGSNSEAA*PSVRPRMLLAF Trigger: AAAAGCCAGAAGCATTCGTGGCCTCACAGAGGGTCAGGCAGCCTCAGAGTTGCTTCCCAGAGTCAGATGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | GGAGCAGCCCTCAACAGCTGGTTAAGATCTACTCATTaGGGGTTAAGATGCCAGAGCGCAAGCGCTCGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GAALNSWLRSTH*GLRCQSASARH Trigger: GTGGCGAGCGCTTGCGCTCTGGCATCTTAACCCGCAATGAGTAGATCTTAACCAGCTGTTGAGGGCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | CAGGGAAAACGCCCCATTCTTCCTGCAGGGATGCCGTaGCAGCCATGCAGCCAGATCACAGTTTGCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGKRPILPAGMP*QPCSQITVCMS Trigger: AGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCCTGCAGGAAGAATGGGGCGTTTTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | ATGAGGACAGTAACAGGGAAAACGCCCCATTCTTCCTaGAGGGATGCCGTGCCAGCCATGCAGCCAGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: MRTVTGKTPHSS*RDAVPAMQPDH Trigger: GTGATCTGGCTGCATGGCTGGCACGGCATCCCTGCAGGAAGAATGGGGCGTTTTCCCTGTTACTGTCCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | CAAAAGTGTCATGCAGGAAGGCCTTCTGAGGGACACTaGTGGGATGGACACCTGGGAGGGGAAGACCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QKCHAGRPSEGH*WDGHLGGEDQL Trigger: CAACTGGTCTTCCCCTCCCAGGTGTCCATCCCAGCAGTGTCCCTCAGAAGGCCTTCCTGCATGACACTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | AAGTGTCATGCAGGAAGGCCTTCTGAGGGACACTGCTaGGATGGACACCTGGGAGGGGAAGACCAGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KCHAGRPSEGHC*DGHLGGEDQLL Trigger: CAACAACTGGTCTTCCCCTCCCAGGTGTCCATCCCAGCAGTGTCCCTCAGAAGGCCTTCCTGCATGACACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | AGCATGAAATGTGGCATTCCCACAGCGAGCTGTCTGTaGTGGATGTCTAACACACAGGCTAGCCCTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SMKCGIPTASCL*WMSNTQASPGH Trigger: GTGGCCAGGGCTAGCCTGTGTGTTAGACATCCAGCACAGACAGCTCGCTGTGGGAATGCCACATTTCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | AGTAACAGGGAAAACGCCCCATTCTTCCTGCAGGGATaGCGTGCCAGCCATGCAGCCAGATCACAGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SNRENAPFFLQG*RASHAARSQFA Trigger: TGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCCTGCAGGAAGAATGGGGCGTTTTCCCTGTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | ATGAAATGTGGCATTCCCACAGCGAGCTGTCTGTGCTaGATGTCTAACACACAGGCTAGCCCTGGCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: MKCGIPTASCLC*MSNTQASPGHR Trigger: CCTGTGGCCAGGGCTAGCCTGTGTGTTAGACATCCAGCACAGACAGCTCGCTGTGGGAATGCCACATTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR TCA 72 bp | AATACAAAAGGCGCATCTGACTCTGGGAAGCAACTCTaGGGCTGCCTGACCCTCTGTGAGGCCACGAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: NTKGASDSGKQL*GCLTLCEATNA Trigger: AGCATTCGTGGCCTCACAGAGGGTCAGGCAGCCTCAGAGTTGCTTCCCAGAGTCAGATGCGCCTTTTGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | AATCCACCCAATGAAAGGAAATCATGCCAGGCCGGGTaGTATGCTCCTCTTATCCCAACACACTGTGGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NPPNERKSCQAG*YAPLIPTHCGG Trigger: GCCCCCACAGTGTGTTGGGATAAGAGGAGCATACCACCCGGCCTGGCATGATTTCCTTTCATTGGGTGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTAACACACAGCATTACAGTGAATGCTGCACAGCTCCGTTAGCTTCTGCACATCCACCCATCACCCCTTaGGGGCAGACAAAGCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: ANTQHYSECCTAPLASAHPPITP*GQTKPL Trigger: CAGTGGCTTTGTCTGCCCCAAAGGGGTGATGGGTGG...ATGTGCAGAAGCTAACGGAGCTGTGCAGCATTCACTGTAATGCTGTGTGTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR TCA 72 bp | AGGACAGAAGCAATTTCCCCAGCTTGGCTCTCAGCATaGAATGTGGCATTCCCACAGCGAGCTGTCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTEAISPAWLSA*NVAFPQRAVCA Trigger: AGCACAGACAGCTCGCTGTGGGAATGCCACATTTCATGCTGAGAGCCAAGCTGGGGAAATTGCTTCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | AAGCAATTTCCCCAGCTTGGCTCTCAGCATGAAATGTaGCATTCCCACAGCGAGCTGTCTGTGCTGGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: KQFPQLGSQHEM*HSHSELSVLDV Trigger: GACATCCAGCACAGACAGCTCGCTGTGGGAATGCCACATTTCATGCTGAGAGCCAAGCTGGGGAAATTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | CTGACCAAATCAGCAGCAGGTGTACTAATGGTGAAGTaGGGAGCACGACAGAGACAGACATGGGTAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTKSAAGVLMVK*GARQRQTWVDS Trigger: GCTGTCTACCCATGTCTGTCTCTGTCGTGCTCCCCACTTCACCATTAGTACACCTGCTGCTGATTTGGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | AAGTCTCCGTCATGGTCCTGCCTTTCTTTACACTTCTaGATGCATGCACACACACACAGTTGCAGGAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSPSWSCLSLHF*MHAHTHSCRRL Trigger: CAGCCTCCTGCAACTGTGTGTGTGTGCATGCATGCAGAAGTGTAAAGAAAGGCAGGACCATGACGGAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | AGATCCCATGCTAACACACAGCATTACAGTGAATGCTaGACAGCTCCGTTAGCTTCTGCACATTGCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSHANTQHYSEC*TAPLASAHCQA Trigger: TGCCTGGCAATGTGCAGAAGCTAACGGAGCTGTGCAGCATTCACTGTAATGCTGTGTGTTAGCATGGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | CAAAGATCCCATGCTAACACACAGCATTACAGTGAATaGTGCACAGCTCCGTTAGCTTCTGCACATTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QRSHANTQHYSE*CTAPLASAHCQ Trigger: CTGGCAATGTGCAGAAGCTAACGGAGCTGTGCAGCATTCACTGTAATGCTGTGTGTTAGCATGGGATCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTCACTTCTCCCTCATTGCAATAAATGAGAGGGCTGATGTGTTCAAAGCAAGGGTTTCAACACTGTaGTGTGGAGAAGGGCCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AFHFSLIAINERADVFKARVSTL*CGEGPG Trigger: TCCCGGCCCTTCTCCACACAACAGTGTTGAAACCCT...TGCTTTGAACACATCAGCCCTCTCATTTATTGCAATGAGGGAGAAGTGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTCACTTCTCCCTCATTGCAATAAATGAGAGGGCTGATGTGTTCAAAGCAGATGGCACCATGACCTaGCTGGACATCAGACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AFHFSLIAINERADVFKADGTMT*LDIRLA Trigger: TGCCAGTCTGATGTCCAGCAAGGTCATGGTGCCATC...TGCTTTGAACACATCAGCCCTCTCATTTATTGCAATGAGGGAGAAGTGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR TCA 72 bp | GGATGTCTAACACACAGGCTAGCCCTGGCCACAGGCTaGGTCTTTCTTGTCTTCTATAATGTCCAAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: GCLTHRLALATG*VFLVFYNVQNT Trigger: AGTGTTTTGGACATTATAGAAGACAAGAAAGACTCAGCCTGTGGCCAGGGCTAGCCTGTGTGTTAGACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTCACTTCTCCCTCATTGCAATAAATGAGAGGGCTGATGTGTTCAAAGCAGAATGCTTCTGGCTTTaGCCTCAGGCAAACACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AFHFSLIAINERADVFKAECFWL*PQANTG Trigger: TCCTGTGTTTGCCTGAGGCAAAAGCCAGAAGCATTC...TGCTTTGAACACATCAGCCCTCTCATTTATTGCAATGAGGGAGAAGTGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | GTGTCTATTCCTACAGAAGCGGCAACCAGAATGGCCTaGAAAGCTGAAAATGGTTCCCTTATTAGAAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSIPTEAATRMA*KAENGSLIRKG Trigger: CCCTTTTCTAATAAGGGAACCATTTTCAGCTTTGCAGGCCATTCTGGTTGCCGCTTCTGTAGGAATAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | ACAGAACTGTTGATAACAGAGCAGCCAGTCCTGTGGTaGCTAAGCAGCAAAAGTGTTCAAAGCTACTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TELLITEQPVLW*LSSKSVQSYYN Trigger: ATTGTAGTAGCTTTGAACACTTTTGCTGCTTAGGCACCACAGGACTGGCTGCTCTGTTATCAACAGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | ACAGTGTGTCTATTCCTACAGAAGCGGCAACCAGAATaGCCTGCAAAGCTGAAAATGGTTCCCTTATTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TVCLFLQKRQPE*PAKLKMVPLLE Trigger: TTCTAATAAGGGAACCATTTTCAGCTTTGCAGGCCATTCTGGTTGCCGCTTCTGTAGGAATAGACACACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAGCGGCAACCAGAATGGCCTGCAAAGCTGAAAATGGTTCCCTTATTAGACAGGCTGAGTCTTTCTaGTCTTCTATAATGTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TEAATRMACKAENGSLIRQAESF*SSIMSK Trigger: TTTGGACATTATAGAAGACAAGAAAGACTCAGCCTG...TCTAATAAGGGAACCATTTTCAGCTTTGCAGGCCATTCTGGTTGCCGCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR TCA 72 bp | GTCTTTCTTGTCTTCTATAATGTCCAAAACACTGGCTaGAAGGCAATTTTAGTGCGAGTGGCTGTCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VFLVFYNVQNTG*KAILVRVAVFS Trigger: GGAGAAGACAGCCACTCGCACTAAAATTGCCTTTCAGCCAGTGTTTTGGACATTATAGAAGACAAGAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CCA 72 bp | AGGGCTGATGTGTTCAAAGCAACCTATAATTTAGTCTaGGATCTGACCAAATCAGCAGCAGGTGTACTAATG | + |
|
Preference number: 3 (lower is better) Translates to: RADVFKATYNLV*DLTKSAAGVLM Trigger: CATTAGTACACCTGCTGCTGATTTGGTCAGATCCCAGACTAAATTATAGGTTGCTTTGAACACATCAGCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR GCA 72 bp | TTCCGAATAAATAGTAAACCTACTTTGTATTTATTGTaGCTGATACCACACAGGCACAGTCATCCCACGACA | + |
|
Preference number: 3 (lower is better) Translates to: FRINSKPTLYLL*LIPHRHSHPTT Trigger: TGTCGTGGGATGACTGTGCCTGTGTGGTATCAGGCACAATAAATACAAAGTAGGTTTACTATTTATTCGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR GCA 90 bp | CCCAAAGGGAGCTCTGGAGCTGTCCCCAAAGTAGTGTTGGAGAGACCAGGCTCTGCGTCTCTGTGGACCTaGATCTGCTCCAGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKGSSGAVPKVVLERPGSASLWT*ICSRSP Trigger: GGGGCTCCTGGAGCAGATGCAGGTCCACAGAGACGC...AGAGCCTGGTCTCTCCAACACTACTTTGGGGACAGCTCCAGAGCTCCCTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | ACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATaGAGTCCAAGGCCAGCCCAGGCTCCAAAGCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: THTQLQEAEAGG*SPRPAQAPKQD Trigger: GTCTTGCTTTGGAGCCTGGGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | AGGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTaGCATGTCTGGTGCGACAGCCTCGCTGATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDAVPAMQPDHS*HVWCDSLADPS Trigger: ACTGGGATCAGCGAGGCTGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | CTGGAAGGCTGCTCCACTGGCTCTAAGCAGAGAATCTaGCCATCCCAGCCTGAGGCAGCAAGCCACACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEGCSTGSKQRI*PSQPEAASHTL Trigger: CAGGGTGTGGCTTGCTGCCTCAGGCTGGGATGGCAAGATTCTCTGCTTAGAGCCAGTGGAGCAGCCTTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGACCAGTTGTTGCAGGGCAAGCACAGGAAGGTCTTAGGAGCCCCAAAGGGGACTCGGCGTCTCTGTaGACCTGCATCTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRPVVAGQAQEGLRSPKGDSASL*TCICSR Trigger: CCTGGAGCAGATGCAGGTCCACAGAGACGCCGAGTC...CCCTTTGGGGCTCCTAAGACCTTCCTGTGCTTGCCCTGCAACAACTGGTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | GCATGCACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATTGAGTCCAAGGTGCTCCAAGGGCACGTaGGACCCCTCATACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACTHTQLQEAEAGGLSPRCSKGT*DPSYMS Trigger: AGACATGTATGAGGGGTCCCACGTGCCCTTGGAGCA...CCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATTGAGTCCAAGGCCAGCCAGCCAGGTCATGGTCTaGATGTACTGCTCCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: THTQLQEAEAGGLSPRPASQVMV*MYCSVF Trigger: GAACACGGAGCAGTACATCCAGACCATGACCTGGCT...GGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | GGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTTGCATGTCTGGTGCGACAGCAGAGGAGTCCTCCTaGGGTAGAATGTGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GMPCQPCSQITVCMSGATAEESS*GRMCGG Trigger: TCCACCACACATTCTACCCCAGGAGGACTCCTCTGC...TGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | CACTATAAGCAAGGTCTCATCAGGGTTTCAACACTGTaGTGTGGAGAAGGGCCGGGAGGCCCCAGGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HYKQGLIRVSTL*CGEGPGGPRRP Trigger: TGGCCGCCTGGGGCCTCCCGGCCCTTCTCCACACAACAGTGTTGAAACCCTGATGAGACCTTGCTTATAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATTGAGTCCAAGGCCAGCCAATGGAGTCCCCGGATaGCAAAGCTTGGGTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: THTQLQEAEAGGLSPRPANGVPG*QSLGHT Trigger: AGTATGACCCAAGCTTTGCCATCCGGGGACTCCATT...GGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | GGGAGCAGCCCTCAACAGCTGGTTAAGATCTACTCATaGCGGGTTAAGATGCCAGAGCGCAAGCGCTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSPQQLVKIYS*RVKMPERKRSP Trigger: TGGCGAGCGCTTGCGCTCTGGCATCTTAACCCGCAATGAGTAGATCTTAACCAGCTGTTGAGGGCTGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | CTCCAGAGGGGGAAGGACAGAAGCAATTTCCCCAGCTaGGCTCTCAGCATGAAATGTGGCATTCCCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQRGKDRSNFPS*ALSMKCGIPTA Trigger: CGCTGTGGGAATGCCACATTTCATGCTGAGAGCCAAGCTGGGGAAATTGCTTCTGTCCTTCCCCCTCTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCTGCTCCCTCAGGAACCTGCTTCCTGGTGTGCTGCAGATCACCACGCCCTTCCCAAACTGGGCGTTaGAGAAACTTTTGGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RAAPSGTCFLVCCRSPRPSQTGR*RNFWSF Trigger: AAATGACCAAAAGTTTCTTCAACGCCCAGTTTGGGA...AGGGCGTGGTGATCTGCAGCACACCAGGAAGCAGGTTCCTGAGGGAGCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | TTCTTTACACTTCTGCATGCATGCACACACACACAGTaGCAGGAGGCTGAGGCCGGAGGATTGAGTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFTLLHACTHTQ*QEAEAGGLSPR Trigger: CCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGTGCATGCATGCAGAAGTGTAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | GGGATGCCGTGCCAGCCATGCAGCCAGATCACAGTTTGCATGTCTGGTGCGACATCAGCAAGTTGTTCATaGTGGATGGAACCAATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GMPCQPCSQITVCMSGATSASCS*WMEPIR Trigger: ACGAATTGGTTCCATCCATCATGAACAACTTGCTGA...TGTCGCACCAGACATGCAAACTGTGATCTGGCTGCATGGCTGGCACGGCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGCCACTGTGACAAATGCTTCCTGTTTTCCCTCAACAAAGTCATTCCAGGAGCAGCAAAGGGGCTTTaGAGGCAGACGGGCTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QSHCDKCFLFSLNKVIPGAAKGL*RQTGCP Trigger: CGGACAGCCCGTCTGCCTTCAAAGCCCCTTTGCTGC...TCCTGGAATGACTTTGTTGAGGGAAAACAGGAAGCATTTGTCACAGTGGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR GCA 90 bp | ACAATCAGATGTAATCAAGGATTCATCCCTCCAGAGGGGGAAGGACAGAAGCAAGCAGGGAGCTCATGTTaGAGAGGAGTCCTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIRCNQGFIPPEGEGQKQAGSSC*RGVLLG Trigger: CCCCAGGAGGACTCCTCTGCAACATGAGCTCCCTGC...TTGCTTCTGTCCTTCCCCCTCTGGAGGGATGAATCCTTGATTACATCTGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACACAGTTGCAGGAGGCTGAGGCCGGAGGATTGAGTCCAAGGCCAGCCGTCTACAAAGCTACTTaGGCTATTGGTAATGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: THTQLQEAEAGGLSPRPAVYKAT*AIGNEE Trigger: TTCCTCATTACCAATAGCCCAAGTAGCTTTGTAGAC...GGCTGGCCTTGGACTCAATCCTCCGGCCTCAGCCTCCTGCAACTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR GCA 90 bp | GTGACAAATGCTTCCTGTTTTCCCTCAACAAAGTCATTCCAGGAGGCTGTGAATAGCCCCGTCAAGGTCTaGAGCCAGGTCATGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTNASCFPSTKSFQEAVNSPVKV*SQVMVW Trigger: CCAGACCATGACCTGGCTGCAGACCTTGACGGGGCT...ATTCACAGCCTCCTGGAATGACTTTGTTGAGGGAAAACAGGAAGCATTTGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGGGAGCTCTGGAGCTGTCCCCAAAGTAGTGTTGGAGAGACCAGGCTCTAACAAGCTCCCAAACTaGGCGTTGAAGAAACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PKGSSGAVPKVVLERPGSNKLPN*ALKKLL Trigger: CAAAAGTTTCTTCAACGCCCAGTTTGGGAGCTTGTT...AGAGCCTGGTCTCTCCAACACTACTTTGGGGACAGCTCCAGAGCTCCCTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | AGATGTAATCAAGGATTCATCCCTCCAGAGGGGGAAGGACAGAAGCAATTTCCCTCTCGGCCTGAACTATaGCCACATCGAACAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCNQGFIPPEGEGQKQFPSRPEL*PHRTGL Trigger: GAGACCTGTTCGATGTGGTCATAGTTCAGGCCGAGA...GGGAAATTGCTTCTGTCCTTCCCCCTCTGGAGGGATGAATCCTTGATTACATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR GCA 90 bp | CTTATCCCAACACACTGTGGGGGCAGAGGCAAGCAGATCTCTATAAGTTTGAGGATGGTCTGGATGTACTaGTCCGTGTTCATGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTHCGGRGKQISISLRMVWMY*SVFMIL Trigger: CAGGATCATGAACACGGAGCAGTACATCCAGACCAT...CCTCAAACTTATAGAGATCTGCTTGCCTCTGCCCCCACAGTGTGTTGGGATAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | GTGACAAATGCTTCCTGTTTTCCCTCAACAAAGTCATTCCAGGAGGCTGTGAATTCTGCAGCCAGGTCATaGTCTGGATGTACTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VTNASCFPSTKSFQEAVNSAARS*SGCTAP Trigger: CGGAGCAGTACATCCAGACCATGACCTGGCTGCAGA...ATTCACAGCCTCCTGGAATGACTTTGTTGAGGGAAAACAGGAAGCATTTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | AACAAAGTCATTCCAGGAGGCTGTGAATTTTATGGGAAAATGTCCTTGAAAGCCCATCAGGGACAACACTaGGGCCTCTGTACACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKVIPGGCEFYGKMSLKAHQGQH*GLCTLS Trigger: GGACAGTGTACAGAGGCCTCAGTGTTGTCCCTGATG...GGCTTTCAAGGACATTTTCCCATAAAATTCACAGCCTCCTGGAATGACTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGCGGCAACCAGAATGGCCTGCAAAGCTGAAAATGGTTCCCTTATTAGAGCGAGAAGATATCCATaGACTGCTTCATGGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEAATRMACKAENGSLIRARRYP*TASWCS Trigger: GGAACACCATGAAGCAGTTCATGGATATCTTCTCGC...TCTAATAAGGGAACCATTTTCAGCTTTGCAGGCCATTCTGGTTGCCGCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | AGATGTAATCAAGGATTCATCCCTCCAGAGGGGGAAGGACAGAAGCAATTTCCCCATACTCATACTTCCTaGTTTCCACAGGATACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCNQGFIPPEGEGQKQFPHTHTS*FPQDTC Trigger: ACAGGTATCCTGTGGAAATCAGGAAGTATGAGTATG...GGGAAATTGCTTCTGTCCTTCCCCCTCTGGAGGGATGAATCCTTGATTACATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR GCA 90 bp | GACCCCAGCCAAGAGTCCCAGGGACAAGCTAAAACTTGTCCTGGCTACACTAGAAAAATTCATACAAATTaGCCTGCTTGTAAATCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSQESQGQAKTCPGYTRKIHTN*PACKSG Trigger: GCCAGATTTACAAGCAGGGCAATTTGTATGAATTTT...TCTAGTGTAGCCAGGACAAGTTTTAGCTTGTCCCTGGGACTCTTGGCTGGGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCATCAAGAGGTCTCACTTGTCAGAAGCCATCAAGAGGTCTCACTCATCAACGAGAAAATGGCGTCTaGATTCAGCAAGTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPSRGLTCQKPSRGLTHQRENGV*IQQVVH Trigger: ATGAACAACTTGCTGAATCCAGACGCCATTTTCTCG...TTGATGAGTGAGACCTCTTGATGGCTTCTGACAAGTGAGACCTCTTGATGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCGGCAACCAGAATGGCCTGCAAAGCTGAAAATGGTTCCCTTATTAGAATTATCCCTTTGATGTaGACATCCCTTATGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEAATRMACKAENGSLIRIIPLM*TSLMES Trigger: GGACTCCATAAGGGATGTCCACATCAAAGGGATAAT...TCTAATAAGGGAACCATTTTCAGCTTTGCAGGCCATTCTGGTTGCCGCTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | AACAAAGTCATTCCAGGAGGCTGTGAATTTTATGGGAAAATGTCCTTGAAAGCCAACATCTTCTTGCCGTaGGCAGCCAGTTTAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKVIPGGCEFYGKMSLKANIFLP*AASLAN Trigger: GTTGGCTAAACTGGCTGCCCACGGCAAGAAGATGTT...GGCTTTCAAGGACATTTTCCCATAAAATTCACAGCCTCCTGGAATGACTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | CCTAAGCAGCAAAAGTGTTCAAAGCTACTACAATCAGATGTAATCAAGGATTCAGCCTCCGCTTGTCATTaGAGAAGTTGGGTTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PKQQKCSKLLQSDVIKDSASACH*RSWVSR Trigger: CCGAGAAACCCAACTTCTTCAATGACAAGCGGAGGC...TGAATCCTTGATTACATCTGATTGTAGTAGCTTTGAACACTTTTGCTGCTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTGTTCAAAGCAACCTATAATTTAGTCTGGGATCTGACCAAATCAGCAGTGTGTGGAGGTGCTTaGAATAGAATACCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ADVFKATYNLVWDLTKSAVCGGA*NRIPGC Trigger: ACACCCTGGTATTCTATTCCAAGCACCTCCACACAC...TGCTGATTTGGTCAGATCCCAGACTAAATTATAGGTTGCTTTGAACACATCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTTCACTTCTCCCTCATTGCAATAAATGAGAGGGCTGATGTGTTCAAAGCACCTCATACATGTCTATaGCTTCTTCATCAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: AFHFSLIAINERADVFKAPHTCL*LLHQGQ Trigger: TTGTCCCTGATGAAGAAGTCATAGACATGTATGAGG...TGCTTTGAACACATCAGCCCTCTCATTTATTGCAATGAGGGAGAAGTGAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR TCA 90 bp | CCTAAGCAGCAAAAGTGTTCAAAGCTACTACAATCAGATGTAATCAAGGATTCACCCTTATGGAGTCCTTaGCGTCTTTGTACAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQQKCSKLLQSDVIKDSPLWSP*RLCTGA Trigger: TGCACCTGTACAAAGACGTCAAGGACTCCATAAGGG...TGAATCCTTGATTACATCTGATTGTAGTAGCTTTGAACACTTTTGCTGCTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| 3UTR CAA 72 bp | ACATTCCGAATAAATAGTAAACCTACTTTGTATTTATaGTGCCTGATACCACACAGGCACAGTCATCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TFRINSKPTLYL*CLIPHRHSHPT Trigger: CGTGGGATGACTGTGCCTGTGTGGTATCAGGCACAATAAATACAAAGTAGGTTTACTATTTATTCGGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS CCA 90 bp | GGCTGTCCGACCATGCAGGGAGCTCATGTTGCAGAGGAGTCCTCCTaGGGTAGAATGTGTGGTGGACGTCGTAGTTCAGAAGGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GCPTMQGAHVAEESS*GRMCGGRRSSEGSS Trigger: TGAGCTGCCTTCTGAACTACGACGTCCACCACACATTCTACCCCAGGAGGACTCCTCTGCAACATGAGCTCCCTGCATGGTCGGACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | CATCCGGGCAGCATGCATCCTTTTAGGACCCTGACACTGAGCAGCTGCCAAAACTGCAGCAAAGGGGCTTaGAAGGCAGACGGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HPGSMHPFRTLTLSSCQNCSKGA*KADGLS Trigger: GGACAGCCCGTCTGCCTTCAAAGCCCCTTTGCTGCA...GTTTTGGCAGCTGCTCAGTGTCAGGGTCCTAAAAGGATGCATGCTGCCCGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS CCA 90 bp | GTTCGAGAAAATGGCGTCTGGATTCAGCAAGTTGTTCATGATGGATaGAACCAATTCGTCCGTGCTCCTCTTCGCCTCGTGGTAGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VRENGVWIQQVVHDG*NQFVRAPLRLVVAR Trigger: GCGCGCTACCACGAGGCGAAGAGGAGCACGGACGAATTGGTTCCATCCATCATGAACAACTTGCTGAATCCAGACGCCATTTTCTCGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS CCA 90 bp | GTCCTTCCCCACGATGTACCGCATCCCTTTGTCTACAAAGCTACTTaGGCTATTGGTAATGAGGAACATCTTCTTGCCGTGGGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLPHDVPHPFVYKAT*AIGNEEHLLAVGSQ Trigger: CTGGCTGCCCACGGCAAGAAGATGTTCCTCATTACCAATAGCCCAAGTAGCTTTGTAGACAAAGGGATGCGGTACATCGTGGGGAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | CATCCGGGCAGCATGCATCCTTTTAGGACCCTGACACTGAGCAGCTGCCAAAACCGGTACATTATCCCTTaGATGTGGACATCCCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: HPGSMHPFRTLTLSSCQNRYIIP*MWTSLM Trigger: CATAAGGGATGTCCACATCAAAGGGATAATGTACCG...GTTTTGGCAGCTGCTCAGTGTCAGGGTCCTAAAAGGATGCATGCTGCCCGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | ACAATCAGATGTAATCAAGGATTCATCCCTCCAGAGGGGGAAGGACAGAAGCAAGGATACCTGTGTTCGTaGATGAGAAGGTCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TIRCNQGFIPPEGEGQKQGYLCS*MRRSRA Trigger: TGCCCGGGACCTTCTCATCAACGAACACAGGTATCC...TTGCTTCTGTCCTTCCCCCTCTGGAGGGATGAATCCTTGATTACATCTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS TCA 90 bp | TCTCATTGTTCGAGAAAATGGCGTCTGGATTCAGCAAGTTGTTCATaGTGGATGGAACCAATTCGTCCGTGCTCCTCTTCGCCTCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SHCSRKWRLDSASCS*WMEPIRPCSSSPRG Trigger: ACCACGAGGCGAAGAGGAGCACGGACGAATTGGTTCCATCCATCATGAACAACTTGCTGAATCCAGACGCCATTTTCTCGAACAATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCAACAAAGTCATTCCAGGAGGCTGTGAATTTTATGGGAAAATGTCCTTGCAGGGAGCTCATGTaGCAGAGGAGTCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPSTKSFQEAVNFMGKCPCRELM*QRSPPG Trigger: CCCAGGAGGACTCCTCTGCAACATGAGCTCCCTGCA...AGGACATTTTCCCATAAAATTCACAGCCTCCTGGAATGACTTTGTTGAGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS GCA 90 bp | AATGAGGAACATCTTCTTGCCGTGGGCAGCCAGTTTAGCCAACACTaGACGGGTCTGATCAGCATAACAGATGTACTTTTCAATATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NEEHLLAVGSQFSQH*TGLISITDVLFNIR Trigger: GCGGATATTGAAAAGTACATCTGTTATGCTGATCAGACCCGTGCAGTGTTGGCTAAACTGGCTGCCCACGGCAAGAAGATGTTCCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | AGATGTAATCAAGGATTCATCCCTCCAGAGGGGGAAGGACAGAAGCAATTTCCCTGGCCTTTCTGCAGCTaGTGGATTTTATCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCNQGFIPPEGEGQKQFPWPFCS*WILSQS Trigger: ACTCTGGGATAAAATCCACAAGCTGCAGAAAGGCCA...GGGAAATTGCTTCTGTCCTTCCCCCTCTGGAGGGATGAATCCTTGATTACATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | CTTATCCCAACACACTGTGGGGGCAGAGGCAAGCAGATCTCTATAAGTTTGAGGCCAAAATACAGTACTTaGGATCCTCTCCATCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LIPTHCGGRGKQISISLRPKYST*DPLHPV Trigger: CACTGGATGGAGAGGATCCAAAGTACTGTATTTTGG...CCTCAAACTTATAGAGATCTGCTTGCCTCTGCCCCCACAGTGTGTTGGGATAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCCACTGTGACAAATGCTTCCTGTTTTCCCTCAACAAAGTCATTCCAGGAGACAGGCTCATCTCATaGTTCGAGAAAATGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSHCDKCFLFSLNKVIPGDRLIS*FEKMAS Trigger: AGACGCCATTTTCTCGAACAATGAGATGAGCCTGTC...TCCTGGAATGACTTTGTTGAGGGAAAACAGGAAGCATTTGTCACAGTGGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCAACAAAGTCATTCCAGGAGGCTGTGAATTTTATGGGAAAATGTCCTGCCTCAGGAAGTAGGTaGGATTCTGGTCTGTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPSTKSFQEAVNFMGKCPASGSR*DSGLFG Trigger: TCCGAACAGACCAGAATCCAACCTACTTCCTGAGGC...AGGACATTTTCCCATAAAATTCACAGCCTCCTGGAATGACTTTGTTGAGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS CCA 90 bp | TTTTCAATATCCGCTTCGATTGCTCGGTACATTATCCCTTTGATGTaGACATCCCTTATGGAGTCCTTGACGTCTTTGTACAGGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FSISASIARYIIPLM*TSLMESLTSLYRCT Trigger: TGTGCACCTGTACAAAGACGTCAAGGACTCCATAAGGGATGTCCACATCAAAGGGATAATGTACCGAGCAATCGAAGCGGATATTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS TCA 90 bp | GAATACCAGGGTGTAATCATAATCAAAGCCATATATTTCGATGTCTaGCAGGCTCATCTCATTGTTCGAGAAAATGGCGTCTGGATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EYQGVIIIKAIYFDV*QAHLIVRENGVWIQ Trigger: CTGAATCCAGACGCCATTTTCTCGAACAATGAGATGAGCCTGTCAGACATCGAAATATATGGCTTTGATTATGATTACACCCTGGTATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | AACAAAGTCATTCCAGGAGGCTGTGAATTTTATGGGAAAATGTCCTTGAAAGCCAAGCTACTTGGGCTATaGGTAATGAGGAACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKVIPGGCEFYGKMSLKAKLLGL*VMRNIF Trigger: GAAGATGTTCCTCATTACCAATAGCCCAAGTAGCTT...GGCTTTCAAGGACATTTTCCCATAAAATTCACAGCCTCCTGGAATGACTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCTTTTCACTTCTCCCTCATTGCAATAAATGAGAGGGCTGATGTGTTCAAAGCGTTGAAGAAACTTTaGGTCATTTCTCTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAFHFSLIAINERADVFKALKKL*VISLIS Trigger: GGAGATGAGAGAAATGACCAAAAGTTTCTTCAACGC...TTTGAACACATCAGCCCTCTCATTTATTGCAATGAGGGAGAAGTGAAAAGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS-3UTR CAA 90 bp | CCTAAGCAGCAAAAGTGTTCAAAGCTACTACAATCAGATGTAATCAAGGATTCACTCCCAAACTGGGCGTaGAAGAAACTTTTGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: PKQQKCSKLLQSDVIKDSLPNWA*KKLLVI Trigger: AATGACCAAAAGTTTCTTCAACGCCCAGTTTGGGAG...TGAATCCTTGATTACATCTGATTGTAGTAGCTTTGAACACTTTTGCTGCTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS GCA 72 bp | CAAAGGGGCTTTGAAGGCAGACGGGCTGTCCGACCATaGAGGGAGCTCATGTTGCAGAGGAGTCCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRGFEGRRAVRP*RELMLQRSPPG Trigger: CCCAGGAGGACTCCTCTGCAACATGAGCTCCCTGCATGGTCGGACAGCCCGTCTGCCTTCAAAGCCCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS CAA 72 bp | GGCAGACGGGCTGTCCGACCATGCAGGGAGCTCATGTaGCAGAGGAGTCCTCCTGGGGTAGAATGTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRRAVRPCRELM*QRSPPGVECVV Trigger: CACCACACATTCTACCCCAGGAGGACTCCTCTGCAACATGAGCTCCCTGCATGGTCGGACAGCCCGTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS GCA 72 bp | TGTAAAACCAGCTGTGACTCGGCGTCTCTGTGGACCTaGATCTGCTCCAGGAGCCCCGTCAAGGTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CKTSCDSASLWT*ICSRSPVKVCS Trigger: GCTGCAGACCTTGACGGGGCTCCTGGAGCAGATGCAGGTCCACAGAGACGCCGAGTCACAGCTGGTTTTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS CAA 90 bp | GGCTTTGAAGGCAGACGGGCTGTCCGACCATGCAGGGAGCTCATGTaGCAGAGGAGTCCTCCTGGGGTAGAATGTGTGGTGGACGTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: GFEGRRAVRPCRELM*QRSPPGVECVVDVV Trigger: TACGACGTCCACCACACATTCTACCCCAGGAGGACTCCTCTGCAACATGAGCTCCCTGCATGGTCGGACAGCCCGTCTGCCTTCAAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
||
| CDS GCA 72 bp | GTCAAGGTCTGCAGCCAGGTCATGGTCTGGATGTACTaGTCCGTGTTCATGATCCTGAGCTCGGAACGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VKVCSQVMVWMY*SVFMILSSERS Trigger: GCTCCGTTCCGAGCTCAGGATCATGAACACGGAGCAGTACATCCAGACCATGACCTGGCTGCAGACCTTGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CCA 72 bp | ACCATGCAGGGAGCTCATGTTGCAGAGGAGTCCTCCTaGGGTAGAATGTGTGGTGGACGTCGTAGTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: TMQGAHVAEESS*GRMCGGRRSSE Trigger: TTCTGAACTACGACGTCCACCACACATTCTACCCCAGGAGGACTCCTCTGCAACATGAGCTCCCTGCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS GCA 72 bp | CTGGATGTAATGAAAAGCATCGATCTTCATCAACACTaGCCGCTGGACGTCGTAATGGAGTCCCCGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: LDVMKSIDLHQH*PLDVVMESPDG Trigger: GCCATCCGGGGACTCCATTACGACGTCCAGCGGGCAGTGTTGATGAAGATCGATGCTTTTCATTACATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 90 bp | CCCACGATGTACCGCATCCCTTTGTCTACAAAGCTACTTGGGCTATaGGTAATGAGGAACATCTTCTTGCCGTGGGCAGCCAGTTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: PTMYRIPLSTKLLGL*VMRNIFLPWAASLA Trigger: GGCTAAACTGGCTGCCCACGGCAAGAAGATGTTCCTCATTACCAATAGCCCAAGTAGCTTTGTAGACAAAGGGATGCGGTACATCGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CCA 72 bp | AATGGCGTCTGGATTCAGCAAGTTGTTCATGATGGATaGAACCAATTCGTCCGTGCTCCTCTTCGCCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: NGVWIQQVVHDG*NQFVRAPLRLV Trigger: CACGAGGCGAAGAGGAGCACGGACGAATTGGTTCCATCCATCATGAACAACTTGCTGAATCCAGACGCCATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 72 bp | AAGCTACTTGGGCTATTGGTAATGAGGAACATCTTCTaGCCGTGGGCAGCCAGTTTAGCCAACACTGCACGG | + |
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Preference number: 6 (lower is better) Translates to: KLLGLLVMRNIF*PWAASLANTAR Trigger: CCGTGCAGTGTTGGCTAAACTGGCTGCCCACGGCAAGAAGATGTTCCTCATTACCAATAGCCCAAGTAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 72 bp | TCTCGCCAGTCCTTCCCCACGATGTACCGCATCCCTTaGTCTACAAAGCTACTTGGGCTATTGGTAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRQSFPTMYRIP*STKLLGLLVMR Trigger: CCTCATTACCAATAGCCCAAGTAGCTTTGTAGACAAAGGGATGCGGTACATCGTGGGGAAGGACTGGCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 72 bp | TACCGCATCCCTTTGTCTACAAAGCTACTTGGGCTATaGGTAATGAGGAACATCTTCTTGCCGTGGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: YRIPLSTKLLGL*VMRNIFLPWAA Trigger: GGCTGCCCACGGCAAGAAGATGTTCCTCATTACCAATAGCCCAAGTAGCTTTGTAGACAAAGGGATGCGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 90 bp | AGGCTCATCTCATTGTTCGAGAAAATGGCGTCTGGATTCAGCAAGTaGTTCATGATGGATGGAACCAATTCGTCCGTGCTCCTCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: RLISLFEKMASGFSK*FMMDGTNSSVLLFA Trigger: GGCGAAGAGGAGCACGGACGAATTGGTTCCATCCATCATGAACAACTTGCTGAATCCAGACGCCATTTTCTCGAACAATGAGATGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS TCA 72 bp | TCTGGTCTGTTCGGAACAAGCTCCCAAACTGGGCGTTaGAGAAACTTTTGGTCATTTCTCTCATCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SGLFGTSSQTGR*RNFWSFLSSPS Trigger: GGAAGGAGATGAGAGAAATGACCAAAAGTTTCTTCAACGCCCAGTTTGGGAGCTTGTTCCGAACAGACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CCA 72 bp | CACGATGTACCGCATCCCTTTGTCTACAAAGCTACTTaGGCTATTGGTAATGAGGAACATCTTCTTGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: HDVPHPFVYKAT*AIGNEEHLLAV Trigger: CACGGCAAGAAGATGTTCCTCATTACCAATAGCCCAAGTAGCTTTGTAGACAAAGGGATGCGGTACATCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 72 bp | TCATACTTCCTGATTTCCACAGGATACCTGTGTTCGTaGATGAGAAGGTCCCGGGCAGCATTGAAGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: SYFLISTGYLCS*MRRSRAALKMS Trigger: ACTCATCTTCAATGCTGCCCGGGACCTTCTCATCAACGAACACAGGTATCCTGTGGAAATCAGGAAGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CCA 72 bp | GTTGGATTCTGGTCTGTTCGGAACAAGCTCCCAAACTaGGCGTTGAAGAAACTTTTGGTCATTTCTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: VGFWSVRNKLPN*ALKKLLVISLI Trigger: GATGAGAGAAATGACCAAAAGTTTCTTCAACGCCCAGTTTGGGAGCTTGTTCCGAACAGACCAGAATCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 72 bp | TCAATATCCGCTTCGATTGCTCGGTACATTATCCCTTaGATGTGGACATCCCTTATGGAGTCCTTGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: SISASIARYIIP*MWTSLMESLTS Trigger: AGACGTCAAGGACTCCATAAGGGATGTCCACATCAAAGGGATAATGTACCGAGCAATCGAAGCGGATATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 72 bp | TTCTGGTCTGTTCGGAACAAGCTCCCAAACTGGGCGTaGAAGAAACTTTTGGTCATTTCTCTCATCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FWSVRNKLPNWA*KKLLVISLISF Trigger: GAAGGAGATGAGAGAAATGACCAAAAGTTTCTTCAACGCCCAGTTTGGGAGCTTGTTCCGAACAGACCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS CAA 72 bp | AAGCCATATATTTCGATGTCTGACAGGCTCATCTCATaGTTCGAGAAAATGGCGTCTGGATTCAGCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: KPYISMSDRLIS*FEKMASGFSKL Trigger: CAACTTGCTGAATCCAGACGCCATTTTCTCGAACAATGAGATGAGCCTGTCAGACATCGAAATATATGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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| CDS GCA 72 bp | AGCATAACAGATGTACTTTTCAATATCCGCTTCGATTaGTCGGTACATTATCCCTTTGATGTGGACATCCCT | + |
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Preference number: 6 (lower is better) Translates to: SITDVLFNIRFD*SVHYPFDVDIP Trigger: AGGGATGTCCACATCAAAGGGATAATGTACCGAGCAATCGAAGCGGATATTGAAAAGTACATCTGTTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099396.3 |
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