Pregenerated sensors for NT5DC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039480Ensembl transcript IDs: ENSMUST00000047885.14, ENSMUST00000099973.4, ENSMUST00000105512.8, ENSMUST00000129363.8, ENSMUST00000213269.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAAAGTTTCTGATTTCGTAGGTTTGGGAGGAAGCACTCAGATTTaGATTTTCAAGTTCTATGCTGCTCTGCTATTAGACTGTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: PKVSDFVGLGGSTQI*IFKFYAALLLDCGQ Trigger: CTGTCCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAAATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR CCA 90 bp | ATTTTCAAGTTCTATGCTGCTCTGCTATTAGACTGTGGACAGGCTTaGAAACTGCTGGACCAGGTAGATGCATGTATTTGTCTATCACCT | + |
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Preference number: 1 (lower is better) Translates to: IFKFYAALLLDCGQA*KLLDQVDACICLSP Trigger: AGGTGATAGACAAATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR CAA 90 bp | CATTTTCAAGTTCTATGCTGCTCTGCTATTAGACTGTGGACAGGCTaGGAAACTGCTGGACCAGGTAGATGCATGTATTTGTCTATCACC | + |
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Preference number: 2 (lower is better) Translates to: HFQVLCCSAIRLWTG*ETAGPGRCMYLSIT Trigger: GGTGATAGACAAATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGTACAGTCAGGAGATCCAAAGGGGGAACTACTATGTAACCTGTAAAAACGCACTTGAGGATTGTTaGTCTGAAAGCTTGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SVYSQEIQRGNYYVTCKNALEDC*SESLKA Trigger: GGCCTTCAAGCTTTCAGAGCAACAATCCTCAAGTGC...GTTTTTACAGGTTACATAGTAGTTCCCCCTTTGGATCTCCTGACTGTACACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCGACTGTGGACAGGCTTaGAAACTGCTGGACCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPDCGQA*KLLDQV Trigger: TACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTC...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR GCA 90 bp | TTCGATTTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTTTCAAGTTCTATGCTaGTCTGCTATTAGACTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FDLLEVCLKAIAGPTPKVFQVLC*SAIRLW Trigger: CCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAA...AACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAAATCGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCTTGCTTAAAAGCCATTaGTGGCCCCACTCCCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPLLKSH*WPHSQS Trigger: ACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAA...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGATGCATGTATTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATTTAAAAAGACAGACTaGCAAGTGTCCATTTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GRCMYLSITLEESSKRPAFKKTD*QVSIWS Trigger: TGACCAAATGGACACTTGTCAGTCTGTCTTTTTAAA...TGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATACATGCATCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCGCTGGACCAGGTAGATaGATGTATTTGTCTATCACC | + |
|
Preference number: 2 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPAGPGR*MYLSIT Trigger: GGTGATAGACAAATACATGCATCTACCTGGTCCAGC...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAGGAACTTAATTTGTCTATCACCTTaGAAGAATCCTCAAAACGGC | + |
|
Preference number: 2 (lower is better) Translates to: PIHLCTVKLTGKRGPRNLICLSP*KNPQNG Trigger: GCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAAT...TAAGTTCCTGGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR GCA 90 bp | CCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAGGAACTTACATTTTCAAGTTCTATaGTGCTCTGCTATTAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: PIHLCTVKLTGKRGPRNLHFQVL*CSAIRL Trigger: CAGTCTAATAGCAGAGCAGCATAGAACTTGAAAATG...TAAGTTCCTGGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCTAGGCTTGATTGCATGCGCTCATTATAATACTCTAATGACATTTTGGATATTTCAAGTTCTATGCTaGTCTGCTATTAGACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ALGLIACAHYNTLMTFWIFQVLC*SAIRLW Trigger: CCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAA...TATCCAAAATGTCATTAGAGTATTATAATGAGCGCATGCAATCAAGCCTAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCTAGGCTTGATTGCATGCGCTCATTATAATACTCTAATGACATTTTGGATATTTAAAAAGACAGACTaGCAAGTGTCCATTTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: ALGLIACAHYNTLMTFWIFKKTD*QVSIWS Trigger: TGACCAAATGGACACTTGTCAGTCTGTCTTTTTAAA...TATCCAAAATGTCATTAGAGTATTATAATGAGCGCATGCAATCAAGCCTAGGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCTAGGCTTGATTGCATGCGCTCATTATAATACTCTAATGACATTTTGGATAGGAAGCACTCAGATTTaGATTTTCAAGTTCTATGCT | + |
|
Preference number: 2 (lower is better) Translates to: ALGLIACAHYNTLMTFWIGSTQI*IFKFYA Trigger: AGCATAGAACTTGAAAATGCAAATCTGAGTGCTTCC...TATCCAAAATGTCATTAGAGTATTATAATGAGCGCATGCAATCAAGCCTAGGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGGCAAAAGAGGACCCAGGAACTTATAAAACATCAACTGAATCTGAATATCATTTGTCTATCACCTTaGAAGAATCCTCAAAACGGC | + |
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Preference number: 2 (lower is better) Translates to: NRQKRTQELIKHQLNLNIICLSP*KNPQNG Trigger: GCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAAT...GATATTCAGATTCAGTTGATGTTTTATAAGTTCCTGGGTCCTCTTTTGCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR CAA 90 bp | TTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTCTGATAGACTGTGGACAGGCTaGGAAACTGCTGGACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLEVCLKAIAGPTPKVSDRLWTG*ETAGPG Trigger: ACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCT...ATCAGAAACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR CCA 72 bp | ATGGCTCAGTGGGTAAAAATATTTCCCAGGAAAGCCTaGTGGCCCGGACTTGATGCTCCAAATCCACATGAA | + |
|
Preference number: 3 (lower is better) Translates to: MAQWVKIFPRKA*WPGLDAPNPHE Trigger: TTCATGTGGATTTGGAGCATCAAGTCCGGGCCACCAGGCTTTCCTGGGAAATATTTTTACCCACTGAGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCAAAGTTTCTGATTTCGTAGGTTTGGGAGGAAGCACTCAGATTTGCATTAGACTGTGGACAGGCTaGGAAACTGCTGGACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TPKVSDFVGLGGSTQICIRLWTG*ETAGPG Trigger: ACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCT...AATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR TCA 72 bp | CTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTCTaGTTTCGTAGGTTTGGGAGGAAGCACTCAGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LKSHCWPHSQSF*FRRFGRKHSDL Trigger: CAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR GCA 72 bp | CTGTGGACAGGCTTGGAAACTGCTGGACCAGGTAGATaGATGTATTTGTCTATCACCTTGGAAGAATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LWTGLETAGPGR*MYLSITLEESS Trigger: TGAGGATTCTTCCAAGGTGATAGACAAATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR CCA 72 bp | CATTTTCAAGTTCTATGCTGCTCTGCTATTAGACTGTaGACAGGCTTGGAAACTGCTGGACCAGGTAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: HFQVLCCSAIRL*TGLETAGPGRC Trigger: GCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR CCA 72 bp | GCTCAGTGGGTAAAAATATTTCCCAGGAAAGCCTGGTaGCCCGGACTTGATGCTCCAAATCCACATGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: AQWVKIFPRKAW*PGLDAPNPHEN Trigger: ATTTTCATGTGGATTTGGAGCATCAAGTCCGGGCCACCAGGCTTTCCTGGGAAATATTTTTACCCACTGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| 3UTR GCA 72 bp | GGGAGGAAGCACTCAGATTTGCATTTTCAAGTTCTATaGTGCTCTGCTATTAGACTGTGGACAGGCTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: GRKHSDLHFQVL*CSAIRLWTGLE Trigger: TTCCAAGCCTGTCCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAAATGCAAATCTGAGTGCTTCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR CCA 72 bp | TTCTATGCTGCTCTGCTATTAGACTGTGGACAGGCTTaGAAACTGCTGGACCAGGTAGATGCATGTATTTGT | + |
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Preference number: 3 (lower is better) Translates to: FYAALLLDCGQA*KLLDQVDACIC Trigger: ACAAATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGCAGAGCAGCATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR GCA 72 bp | AGGAAGCACTCAGATTTGCATTTTCAAGTTCTATGCTaGTCTGCTATTAGACTGTGGACAGGCTTGGAAACT | + |
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Preference number: 3 (lower is better) Translates to: RKHSDLHFQVLC*SAIRLWTGLET Trigger: AGTTTCCAAGCCTGTCCACAGTCTAATAGCAGAGCAGCATAGAACTTGAAAATGCAAATCTGAGTGCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR GCA 72 bp | TCTGATTTCGTAGGTTTGGGAGGAAGCACTCAGATTTaGATTTTCAAGTTCTATGCTGCTCTGCTATTAGAC | + |
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Preference number: 3 (lower is better) Translates to: SDFVGLGGSTQI*IFKFYAALLLD Trigger: GTCTAATAGCAGAGCAGCATAGAACTTGAAAATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR CAA 90 bp | CCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAGGAACTTAAGGAAGCACTCAGATTaGCATTTTCAAGTTCTATGC | + |
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Preference number: 3 (lower is better) Translates to: PIHLCTVKLTGKRGPRNLRKHSD*HFQVLC Trigger: GCATAGAACTTGAAAATGCAAATCTGAGTGCTTCCT...TAAGTTCCTGGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR GCA 72 bp | TCAAATCATAATAGAGCATTCGATTTACTGGAAGTTTaGTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: SNHNRAFDLLEV*LKAIAGPTPKV Trigger: AACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAAATCGAATGCTCTATTATGATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTAGGCTTGATTGCATGCGCTCATTATAATACTCTAATGACATTTTGGATATATTTGTCTATCACCTaGGAAGAATCCTCAAAACGG | + |
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Preference number: 3 (lower is better) Translates to: ALGLIACAHYNTLMTFWIYLSIT*EESSKR Trigger: CCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATA...TATCCAAAATGTCATTAGAGTATTATAATGAGCGCATGCAATCAAGCCTAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR-3UTR CAA 90 bp | AACAGGCAAAAGAGGACCCAGGAACTTATAAAACATCAACTGAATCTGAATATCTATTTGTCTATCACCTaGGAAGAATCCTCAAAACGG | + |
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Preference number: 3 (lower is better) Translates to: NRQKRTQELIKHQLNLNIYLSIT*EESSKR Trigger: CCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATA...GATATTCAGATTCAGTTGATGTTTTATAAGTTCCTGGGTCCTCTTTTGCCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| 3UTR GCA 72 bp | GATAAGAGCATTTATTTGGCCCTAGGCTTGATTGCATaGGCTCATTATAATACTCTAATGACATTTTGGATA | + |
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Preference number: 3 (lower is better) Translates to: DKSIYLALGLIA*AHYNTLMTFWI Trigger: TATCCAAAATGTCATTAGAGTATTATAATGAGCGCATGCAATCAAGCCTAGGGCCAAATAAATGCTCTTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS-3UTR TCA 90 bp | AGCTTCGCACTGGCTGAAGCTAATAAGAAAAGCAGTGAAGCGGGGGTGACTCTATGCCGTGGCTTGCCCTaGGCACAGTGCCATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SFALAEANKKSSEAGVTLCRGLP*AQCHQL Trigger: CAGCTGATGGCACTGTGCTCAGGGCAAGCCACGGCA...TAGAGTCACCCCCGCTTCACTGCTTTTCTTATTAGCTTCAGCCAGTGCGAAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
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| CDS-3UTR TCA 90 bp | TTCGCACTGGCTGAAGCTAATAAGAAAAGCAGTGAAGCGGGGGTGACTCTACAGCAAAGCTGTTATAAATaGGCCGGGCGCTCTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FALAEANKKSSEAGVTLQQSCYK*AGRSRA Trigger: TGCCCGAGAGCGCCCGGCTCATTTATAACAGCTTTG...CTGTAGAGTCACCCCCGCTTCACTGCTTTTCTTATTAGCTTCAGCCAGTGCGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
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| CDS-3UTR TCA 90 bp | GGAAAGCCTGGTGGCCCGGACTTGATGCTCCAAATCCACATGAAAATGCAAACTCAAAGCTGTTATAAATaGGCCGGGCGCTCTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GKPGGPDLMLQIHMKMQTQSCYK*AGRSRA Trigger: TGCCCGAGAGCGCCCGGCTCATTTATAACAGCTTTG...AGTTTGCATTTTCATGTGGATTTGGAGCATCAAGTCCGGGCCACCAGGCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| CDS-3UTR TCA 90 bp | GGTAGATGCATGTATTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATGCCGTGGCTTGCCCTaGGCACAGTGCCATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GRCMYLSITLEESSKRPACRGLP*AQCHQL Trigger: CAGCTGATGGCACTGTGCTCAGGGCAAGCCACGGCA...TGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATACATGCATCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS-3UTR TCA 90 bp | GGACTTGATGCTCCAAATCCACATGAAAATGCAAACTACAGTGGTGCACATTGGTGCCGTGGCTTGCCCTaGGCACAGTGCCATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLDAPNPHENANYSGAHWCRGLP*AQCHQL Trigger: CAGCTGATGGCACTGTGCTCAGGGCAAGCCACGGCA...CCAATGTGCACCACTGTAGTTTGCATTTTCATGTGGATTTGGAGCATCAAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| CDS-3UTR CCA 90 bp | TTCGCACTGGCTGAAGCTAATAAGAAAAGCAGTGAAGCGGGGGTGACTCTACAGGAAATCCCAGTCCTCTaGAGTCAGAGTGAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FALAEANKKSSEAGVTLQEIPVL*SQSEQP Trigger: GGGCTGCTCACTCTGACTCCAGAGGACTGGGATTTC...CTGTAGAGTCACCCCCGCTTCACTGCTTTTCTTATTAGCTTCAGCCAGTGCGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGCCTGGTGGCCCGGACTTGATGCTCCAAATCCACATGAAAATGCAAACTGAAATCCCAGTCCTCTaGAGTCAGAGTGAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKPGGPDLMLQIHMKMQTEIPVL*SQSEQP Trigger: GGGCTGCTCACTCTGACTCCAGAGGACTGGGATTTC...AGTTTGCATTTTCATGTGGATTTGGAGCATCAAGTCCGGGCCACCAGGCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| CDS-3UTR CCA 90 bp | AAAGCCTGGTGGCCCGGACTTGATGCTCCAAATCCACATGAAAATGCAAACTACAAGAGTCCACCACTCTaGCACACAGAAGAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: KAWWPGLDAPNPHENANYKSPPL*HTEEPP Trigger: CGGGGGCTCTTCTGTGTGCCAGAGTGGTGGACTCTT...GTAGTTTGCATTTTCATGTGGATTTGGAGCATCAAGTCCGGGCCACCAGGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| CDS-3UTR TCA 90 bp | CCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAGGAACTTATGCCGTGGCTTGCCCTaGGCACAGTGCCATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PIHLCTVKLTGKRGPRNLCRGLP*AQCHQL Trigger: CAGCTGATGGCACTGTGCTCAGGGCAAGCCACGGCA...TAAGTTCCTGGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS-3UTR GCA 90 bp | TTCGATTTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTAACCACAGAGTCTTCTaGCCTCCCCCGTCCGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: FDLLEVCLKAIAGPTPKVNHRVF*PPPSGD Trigger: GTCTCCGGACGGGGGAGGGCAGAAGACTCTGTGGTT...AACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAAATCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS-3UTR TCA 90 bp | GCTATTAGACTGTGGACAGGCTTGGAAACTGCTGGACCAGGTAGATGCATGTATTGTACAGCGTTTGTCTaGCACACAGTGCCTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: AIRLWTGLETAGPGRCMYCTAFV*HTVPPL Trigger: GAGTGGAGGCACTGTGTGTCAGACAAACGCTGTACA...ATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS-3UTR GCA 90 bp | GAGTTCTTTCATAGTGACAACAGGCTGTTCACAGCTTTACAGCTTCGCACTGGCGCCTCCACTCCTTCTTaGCAAAGGCTTCAGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFFHSDNRLFTALQLRTGASTPS*QRLQSV Trigger: CACTGACTGAAGCCTTTGGCAAGAAGGAGTGGAGGC...GCCAGTGCGAAGCTGTAAAGCTGTGAACAGCCTGTTGTCACTATGAAAGAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGCCTGGTGGCCCGGACTTGATGCTCCAAATCCACATGAAAATGCAAACTTTGTCTGACACACAGTaGCTCCACTCCTTCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GKPGGPDLMLQIHMKMQTLSDTQ*LHSFLP Trigger: TGGCAAGAAGGAGTGGAGGCACTGTGTGTCAGACAA...AGTTTGCATTTTCATGTGGATTTGGAGCATCAAGTCCGGGCCACCAGGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
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| CDS-3UTR CCA 90 bp | CAACAGGCTGTTCACAGCTTTACAGCTTCGCACTGGCTGAAGCTAATAAGAAAAAAGAGTCCACCACTCTaGCACACAGAAGAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: QQAVHSFTASHWLKLIRKKSPPL*HTEEPP Trigger: CGGGGGCTCTTCTGTGTGCCAGAGTGGTGGACTCTT...TTTTCTTATTAGCTTCAGCCAGTGCGAAGCTGTAAAGCTGTGAACAGCCTGTTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
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| CDS-3UTR TCA 90 bp | GGTAGATGCATGTATTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCACAAAGCTGTTATAAATaGGCCGGGCGCTCTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRCMYLSITLEESSKRPAQSCYK*AGRSRA Trigger: TGCCCGAGAGCGCCCGGCTCATTTATAACAGCTTTG...TGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATACATGCATCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | GCTATTAGACTGTGGACAGGCTTGGAAACTGCTGGACCAGGTAGATGCATGTATTTGTCTGACACACAGTaGCTCCACTCCTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AIRLWTGLETAGPGRCMYLSDTQ*LHSFLP Trigger: TGGCAAGAAGGAGTGGAGGCACTGTGTGTCAGACAA...ATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTCTGATGAAATCCCAGTCCTCTaGAGTCAGAGTGAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLEVCLKAIAGPTPKVSDEIPVL*SQSEQP Trigger: GGGCTGCTCACTCTGACTCCAGAGGACTGGGATTTC...ATCAGAAACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGAAGAATCCTCAAAACGGCCAGCATAGAAAAGATCAGTCATGTTCTCTTCCTCTGGAGTCAGAGTaGGCAGCCCCTCATCATATC | + |
|
Preference number: 4 (lower is better) Translates to: PWKNPQNGQHRKDQSCSLPLESE*AAPHHI Trigger: GATATGATGAGGGGCTGCTCACTCTGACTCCAGAGG...AAGAGAACATGACTGATCTTTTCTATGCTGGCCGTTTTGAGGATTCTTCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | TTCGATTTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTGTACAGCGTTTGTCTaGCACACAGTGCCTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FDLLEVCLKAIAGPTPKVCTAFV*HTVPPL Trigger: GAGTGGAGGCACTGTGTGTCAGACAAACGCTGTACA...AACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAAATCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | GGACTTGATGCTCCAAATCCACATGAAAATGCAAACTACAGTGGTGCACATTGGTGTACAGCGTTTGTCTaGCACACAGTGCCTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GLDAPNPHENANYSGAHWCTAFV*HTVPPL Trigger: GAGTGGAGGCACTGTGTGTCAGACAAACGCTGTACA...CCAATGTGCACCACTGTAGTTTGCATTTTCATGTGGATTTGGAGCATCAAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
||
| CDS-3UTR GCA 90 bp | TTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTCTGATGCCTCCACTCCTTCTTaGCAAAGGCTTCAGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLEVCLKAIAGPTPKVSDASTPS*QRLQSV Trigger: CACTGACTGAAGCCTTTGGCAAGAAGGAGTGGAGGC...ATCAGAAACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGAGTTCTTTCATAGTGACAACAGGCTGTTCACAGCTTTACAGCTTCGCATTGTCTGACACACAGTaGCTCCACTCCTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLSSFIVTTGCSQLYSFALSDTQ*LHSFLP Trigger: TGGCAAGAAGGAGTGGAGGCACTGTGTGTCAGACAA...TGCGAAGCTGTAAAGCTGTGAACAGCCTGTTGTCACTATGAAAGAACTCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAACCACAGAGTCTTCTaGCCTCCCCCGTCCGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPNHRVF*PPPSGD Trigger: GTCTCCGGACGGGGGAGGGCAGAAGACTCTGTGGTT...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATAGAAAAGATCAGTAAGAGTCCACCACTCTaGCACACAGAAGAGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FVYHLGRILKTASIEKISKSPPL*HTEEPP Trigger: CGGGGGCTCTTCTGTGTGCCAGAGTGGTGGACTCTT...ACTGATCTTTTCTATGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATAGAAAAGATCAGTCAAAGCTGTTATAAATaGGCCGGGCGCTCTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVYHLGRILKTASIEKISQSCYK*AGRSRA Trigger: TGCCCGAGAGCGCCCGGCTCATTTATAACAGCTTTG...ACTGATCTTTTCTATGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | GACCTTTATTCTGTGCTGAGTTCTTTCATAGTGACAACAGGCTGTTCACAGCTTTGTACAGCGTTTGTCTaGCACACAGTGCCTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: DLYSVLSSFIVTTGCSQLCTAFV*HTVPPL Trigger: GAGTGGAGGCACTGTGTGTCAGACAAACGCTGTACA...AAGCTGTGAACAGCCTGTTGTCACTATGAAAGAACTCAGCACAGAATAAAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
||
| CDS-3UTR GCA 90 bp | ACTCCCAAAGTTTCTGATTTCGTAGGTTTGGGAGGAAGCACTCAGATTTGCATTGCCTCCACTCCTTCTTaGCAAAGGCTTCAGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPKVSDFVGLGGSTQICIASTPS*QRLQSV Trigger: CACTGACTGAAGCCTTTGGCAAGAAGGAGTGGAGGC...AATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAAGAGTCCACCACTCTaGCACACAGAAGAGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPKSPPL*HTEEPP Trigger: CGGGGGCTCTTCTGTGTGCCAGAGTGGTGGACTCTT...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCCAAAGTTTCTGATTTCGTAGGTTTGGGAGGAAGCACTCAGATTTGCATTAGGCTTTTCCATTTCTaGCCCCTGAAGCTCCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPKVSDFVGLGGSTQICIRLFHF*PLKLLE Trigger: CTCGAGGAGCTTCAGGGGCCAGAAATGGAAAAGCCT...AATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| 3UTR CAA 72 bp | GGCTTGGAAACTGCTGGACCAGGTAGATGCATGTATTaGTCTATCACCTTGGAAGAATCCTCAAAACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLETAGPGRCMY*SITLEESSKRP Trigger: TGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| 3UTR CAA 72 bp | GTTCTATGCTGCTCTGCTATTAGACTGTGGACAGGCTaGGAAACTGCTGGACCAGGTAGATGCATGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLCCSAIRLWTG*ETAGPGRCMYL Trigger: CAAATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGCAGAGCAGCATAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| 3UTR CAA 72 bp | GCTGGCCCCACTCCCAAAGTTTCTGATTTCGTAGGTTaGGGAGGAAGCACTCAGATTTGCATTTTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGPTPKVSDFVG*GGSTQICIFKF Trigger: GAACTTGAAAATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGGAGTGGGGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | GCTATTAGACTGTGGACAGGCTTGGAAACTGCTGGACCAGGTAGATGCATGTATATCTTCCAGATCCAATaGCAAACCCTTGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AIRLWTGLETAGPGRCMYIFQIQ*QTLATE Trigger: TTCTGTTGCAAGGGTTTGGCATTGGATCTGGAAGAT...ATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCTGGTGGCCCGGACTTGATGCTCCAAATCCACATGAAAATGCAAACTACATCTTCCAGATCCAATaGCAAACCCTTGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAWWPGLDAPNPHENANYIFQIQ*QTLATE Trigger: TTCTGTTGCAAGGGTTTGGCATTGGATCTGGAAGAT...GTAGTTTGCATTTTCATGTGGATTTGGAGCATCAAGTCCGGGCCACCAGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
||
| CDS-3UTR GCA 90 bp | TTGATGCTCCAAATCCACATGAAAATGCAAACTACAGTGGTGCACATTGGTCATGCCTCCACTCCTTCTTaGCAAAGGCTTCAGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LMLQIHMKMQTTVVHIGHASTPS*QRLQSV Trigger: CACTGACTGAAGCCTTTGGCAAGAAGGAGTGGAGGC...ATGACCAATGTGCACCACTGTAGTTTGCATTTTCATGTGGATTTGGAGCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGATGCATGTATTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATTTCTCCAGAGGCTCTaGTTCCTCAGGCTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRCMYLSITLEESSKRPAFLQRL*FLRLFH Trigger: ATGGAAAAGCCTGAGGAAGCAGAGCCTCTGGAGAAA...TGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATACATGCATCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCGAAATCCCAGTCCTCTaGAGTCAGAGTGAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPEIPVL*SQSEQP Trigger: GGGCTGCTCACTCTGACTCCAGAGGACTGGGATTTC...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCCAAAGTTTCTGATTTCGTAGGTTTGGGAGGAAGCACTCAGATTTGCATTTTCAGTCAGTGCCTCTaGAGTCATCATCTTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPKVSDFVGLGGSTQICIFSQCL*SHHLGA Trigger: GGCACCAAGATGATGACTCCAGAGGCACTGACTGAA...AATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | TTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTCTGATGAAATAACACTTTCCTaGGCAGCAAGGAATGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLEVCLKAIAGPTPKVSDEITLS*AARNVG Trigger: TCCGACATTCCTTGCTGCTCAGGAAAGTGTTATTTC...ATCAGAAACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCTGAGTTCTTTCATAGTGACAACAGGCTGTTCACAGCTTTACAGCTTCGCATCTTCCAGATCCAATaGCAAACCCTTGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CAEFFHSDNRLFTALQLRIFQIQ*QTLATE Trigger: TTCTGTTGCAAGGGTTTGGCATTGGATCTGGAAGAT...GCGAAGCTGTAAAGCTGTGAACAGCCTGTTGTCACTATGAAAGAACTCAGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGGCTTGATTGCATGCGCTCATTATAATACTCTAATGACATTTTGGATAAGGCTTTTCCATTTCTaGCCCCTGAAGCTCCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGLIACAHYNTLMTFWIRLFHF*PLKLLE Trigger: CTCGAGGAGCTTCAGGGGCCAGAAATGGAAAAGCCT...TATCCAAAATGTCATTAGAGTATTATAATGAGCGCATGCAATCAAGCCTAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATAGACCTTTATTCTGTGCTGAGTTCTTTCATAGTGACAACAGGCTGTTCCTTGTCTCTCTGTCATaGTGGGAAGGGCACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MNRPLFCAEFFHSDNRLFLVSLS*WEGHMP Trigger: TGGCATGTGCCCTTCCCACCATGACAGAGAGACAAG...GAACAGCCTGTTGTCACTATGAAAGAACTCAGCACAGAATAAAGGTCTATTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
||
| CDS-3UTR TCA 90 bp | TATTCTGTGCTGAGTTCTTTCATAGTGACAACAGGCTGTTCACAGCTTTACAGCGAAATAACACTTTCCTaGGCAGCAAGGAATGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSVLSSFIVTTGCSQLYSEITLS*AARNVG Trigger: TCCGACATTCCTTGCTGCTCAGGAAAGTGTTATTTC...GCTGTAAAGCTGTGAACAGCCTGTTGTCACTATGAAAGAACTCAGCACAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099973.4 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCTTGTCTGACACACAGTaGCTCCACTCCTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPLSDTQ*LHSFLP Trigger: TGGCAAGAAGGAGTGGAGGCACTGTGTGTCAGACAA...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGCTCCAAATCCACATGAAAATGCAAACTACAGTGGTGCACATTGGTCATGAAATAACACTTTCCTaGGCAGCAAGGAATGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LMLQIHMKMQTTVVHIGHEITLS*AARNVG Trigger: TCCGACATTCCTTGCTGCTCAGGAAAGTGTTATTTC...ATGACCAATGTGCACCACTGTAGTTTGCATTTTCATGTGGATTTGGAGCATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213269.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATAGAAAAGATCAGTAAAGGCTTCAGTCAGTaGCTCTGGAGTCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVYHLGRILKTASIEKISKGFSQ*LWSHHL Trigger: AAGATGATGACTCCAGAGGCACTGACTGAAGCCTTT...ACTGATCTTTTCTATGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCTTTCTCCAGAGGCTCTaGTTCCTCAGGCTTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPFLQRL*FLRLFH Trigger: ATGGAAAAGCCTGAGGAAGCAGAGCCTCTGGAGAAA...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCGAAATAACACTTTCCTaGGCAGCAAGGAATGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPEITLS*AARNVG Trigger: TCCGACATTCCTTGCTGCTCAGGAAAGTGTTATTTC...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | TTCGATTTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTTCAATGTTTGGAATTaGAATCGTACTGTAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FDLLEVCLKAIAGPTPKVFNVWN*NRTVGA Trigger: AGCACCTACAGTACGATTGCAATTCCAAACATTGAA...AACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAAATCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGGCTTGATTGCATGCGCTCATTATAATACTCTAATGACATTTTGGATAATCTTCCAGATCCAATaGCAAACCCTTGCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGLIACAHYNTLMTFWIIFQIQ*QTLATE Trigger: TTCTGTTGCAAGGGTTTGGCATTGGATCTGGAAGAT...TATCCAAAATGTCATTAGAGTATTATAATGAGCGCATGCAATCAAGCCTAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | CCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAGGAACTTAAGGCTTTACCATTGGTaGCTCATATTTTCCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PIHLCTVKLTGKRGPRNLRLYHW*LIFSSF Trigger: AAAAGAGGAAAATATGAGGCACCAATGGTAAAGCCT...TAAGTTCCTGGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATAGAAAAGATCAGTTTCAATGTTTGGAATTaGAATCGTACTGTAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVYHLGRILKTASIEKISFNVWN*NRTVGA Trigger: AGCACCTACAGTACGATTGCAATTCCAAACATTGAA...ACTGATCTTTTCTATGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTAATCCCATCCATTTATGTACAGTGAAGTTAACAGGCAAAAGAGGACCCAGGCTTTACCATTGGTaGCTCATATTTTCCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSNPIHLCTVKLTGKRGPRLYHW*LIFSSF Trigger: AAAAGAGGAAAATATGAGGCACCAATGGTAAAGCCT...GGGTCCTCTTTTGCCTGTTAACTTCACTGTACATAAATGGATGGGATTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS GCA 90 bp | GACACACCGGGCTTGTCTGATGTACAGCGTTTGTCTGACACACAGTaGCTCCACTCCTTCTTGCCAAAGGCTTCAGTCAGTGCCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DTPGLSDVQRLSDTQ*LHSFLPKASVSASG Trigger: TCCAGAGGCACTGACTGAAGCCTTTGGCAAGAAGGAGTGGAGGCACTGTGTGTCAGACAAACGCTGTACATCAGACAAGCCCGGTGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047885.14 ENSMUST00000099973.4 ENSMUST00000105512.8 ENSMUST00000213269.2 |
||
| CDS-3UTR CAA 90 bp | GCTATTAGACTGTGGACAGGCTTGGAAACTGCTGGACCAGGTAGATGCATGTATAGAAAGGCCTCTGGCTaGGGAAATGTGAGAAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: AIRLWTGLETAGPGRCMYRKASG*GNVRRI Trigger: GATTCTTCTCACATTTCCCAAGCCAGAGGCCTTTCT...ATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CAA 90 bp | TTCGATTTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTAGAAAGGCCTCTGGCTaGGGAAATGTGAGAAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: FDLLEVCLKAIAGPTPKVRKASG*GNVRRI Trigger: GATTCTTCTCACATTTCCCAAGCCAGAGGCCTTTCT...AACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAAATCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGATGCATGTATTTGTCTATCACCTTGGAAGAATCCTCAAAACGGCCAGCATTTGCTGTCTGTGTCTaGAGAACCCAAGGTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: GRCMYLSITLEESSKRPAFAVCV*RTQGMM Trigger: CATCATACCTTGGGTTCTCAAGACACAGACAGCAAA...TGCTGGCCGTTTTGAGGATTCTTCCAAGGTGATAGACAAATACATGCATCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
||
| CDS-3UTR CAA 90 bp | GCTATTAGACTGTGGACAGGCTTGGAAACTGCTGGACCAGGTAGATGCATGTATCAGCGGTGCACATATTaGCCTAGATTTCTTTTTATT | + |
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Preference number: 5 (lower is better) Translates to: AIRLWTGLETAGPGRCMYQRCTY*PRFLFI Trigger: AATAAAAAGAAATCTAGGCAAATATGTGCACCGCTG...ATACATGCATCTACCTGGTCCAGCAGTTTCCAAGCCTGTCCACAGTCTAATAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS-3UTR CAA 90 bp | TTACTGGAAGTTTGCTTAAAAGCCATTGCTGGCCCCACTCCCAAAGTTTCTGATATTCAATGTTTGGAATaGCAATCGTACTGTAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LLEVCLKAIAGPTPKVSDIQCLE*QSYCRC Trigger: GCACCTACAGTACGATTGCAATTCCAAACATTGAAT...ATCAGAAACTTTGGGAGTGGGGCCAGCAATGGCTTTTAAGCAAACTTCCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS-3UTR CAA 90 bp | ACTCCCAAAGTTTCTGATTTCGTAGGTTTGGGAGGAAGCACTCAGATTTGCATTCAGCGGTGCACATATTaGCCTAGATTTCTTTTTATT | + |
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Preference number: 5 (lower is better) Translates to: TPKVSDFVGLGGSTQICIQRCTY*PRFLFI Trigger: AATAAAAAGAAATCTAGGCAAATATGTGCACCGCTG...AATGCAAATCTGAGTGCTTCCTCCCAAACCTACGAAATCAGAAACTTTGGGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS GCA 72 bp | GGTGCCGTGGCTTGCCCTGAGCACAGTGCCATCAGCTaGAAGTTTAATGAAGGTCCCATCTTCCAGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: GAVACPEHSAIS*KFNEGPIFQIQ Trigger: TTGGATCTGGAAGATGGGACCTTCATTAAACTTGCAGCTGATGGCACTGTGCTCAGGGCAAGCCACGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047885.14 ENSMUST00000099973.4 ENSMUST00000105512.8 ENSMUST00000213269.2 |
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| CDS CAA 72 bp | ATGTCGGACACACCGGGCTTGTCTGATGTACAGCGTTaGTCTGACACACAGTGCCTCCACTCCTTCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: MSDTPGLSDVQR*SDTQCLHSFLP Trigger: TGGCAAGAAGGAGTGGAGGCACTGTGTGTCAGACAAACGCTGTACATCAGACAAGCCCGGTGTGTCCGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047885.14 ENSMUST00000099973.4 ENSMUST00000105512.8 ENSMUST00000213269.2 |
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| CDS CAA 90 bp | CAGCAAGGAATGTCGGACACACCGGGCTTGTCTGATGTACAGCGTTaGTCTGACACACAGTGCCTCCACTCCTTCTTGCCAAAGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QQGMSDTPGLSDVQR*SDTQCLHSFLPKAS Trigger: TGAAGCCTTTGGCAAGAAGGAGTGGAGGCACTGTGTGTCAGACAAACGCTGTACATCAGACAAGCCCGGTGTGTCCGACATTCCTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047885.14 ENSMUST00000099973.4 ENSMUST00000105512.8 ENSMUST00000213269.2 |
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| CDS CAA 72 bp | CTTCATCATTCTCGAGTGTGTAGAAAGGCCTCTGGCTaGGGAAATGTGAGAAGAATCCAGGCTTTAATGCGT | + |
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Preference number: 6 (lower is better) Translates to: LHHSRVCRKASG*GNVRRIQALMR Trigger: ACGCATTAAAGCCTGGATTCTTCTCACATTTCCCAAGCCAGAGGCCTTTCTACACACTCGAGAATGATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047885.14 ENSMUST00000105512.8 |
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| CDS CAA 72 bp | AGAGAACTCCATTGTAAGCTGACATTCCAAGATGCTTaGGATGAGGTTGCTGAGATGGTAACAATAACACAC | + |
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Preference number: 6 (lower is better) Translates to: RELHCKLTFQDA*DEVAEMVTITH Trigger: GTGTGTTATTGTTACCATCTCAGCAACCTCATCCAAAGCATCTTGGAATGTCAGCTTACAATGGAGTTCTCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129363.8 |
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| CDS TCA 72 bp | TTTGTTACCCATAATGTAGAGAACTCCATTGTAAGCTaGCATTCCAAGATGCTTTGGATGAGGTTGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: FVTHNVENSIVS*HSKMLWMRLLR Trigger: TCTCAGCAACCTCATCCAAAGCATCTTGGAATGTCAGCTTACAATGGAGTTCTCTACATTATGGGTAACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129363.8 |
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