Pregenerated sensors for NT5C3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017176Ensembl transcript IDs: ENSMUST00000092688.12, ENSMUST00000092689.9, ENSMUST00000107397.2, ENSMUST00000107398.8, ENSMUST00000107399.9
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCACACTTCGGTTAGAAGGCTGTGGTCCATGGTTTACTTGGAAGTaGATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCTTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LTLRLEGCGPWFTWK*IGRLPTGLPRASCE Trigger: CTCACAAGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACTTCCAAGTAAACCATGGACCACAGCCTTCTAACCGAAGTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR CCA 90 bp | AGAAGGCTCACACTTCGGTTAGAAGGCTGTGGTCCATGGTTTACTTaGAAGTGCATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: RRLTLRLEGCGPWFT*KCIGRLPTGLPRAS Trigger: AGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACTTCCAAGTAAACCATGGACCACAGCCTTCTAACCGAAGTGTGAGCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR GCA 90 bp | TCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTaGAATGAGACATCCAAAATCGGGGACTTCATTCGCTACCACTAC | + |
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Preference number: 1 (lower is better) Translates to: SDPVEIKTLSRPPEN*NETSKIGDFIRYHY Trigger: GTAGTGGTAGCGAATGAAGTCCCCGATTTTGGATGTCTCATTGCAGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR TCA 90 bp | GAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTTACCATTaGGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: EGTQGPPYARQWLYH*AICIPSSENVLREN Trigger: GTTCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR GCA 90 bp | ACTAATGCACTGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTaGAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: TNALHITHGRVLLGA*KLLGGKGFSCSLSL Trigger: AAGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCAGTGCATTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR CCA 90 bp | TGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTaGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTTTCCTTCAACA | + |
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Preference number: 1 (lower is better) Translates to: CTSLMAGCYWEPASC*VEKGFPVPCPFPST Trigger: TGTTGAAGGAAAGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATAAGGTCTCCTCCTCATaGCTGAGGCAGGGCCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: GGVGGPNSSELLSVLTGDKVSSS*LRQGPA Trigger: GGCCGGGCCCTGCCTCAGCCATGAGGAGGAGACCTT...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR CAA 90 bp | ACTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTaGGGCAGGGCCAGGGCTGGGCTGATGGTGGGTTTAGGTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TVLCWTAPGSSRRGF*GRARAGLMVGLGVG Trigger: ACCCACACCTAAACCCACCATCAGCCCAGCCCTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGAACAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGCTTTAAGGTCTCCTCCTCATaGCTGAGGCAGGGCCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: VGGPNSSELLSVLTGDGFKVSSS*LRQGPA Trigger: GGCCGGGCCCTGCCTCAGCCATGAGGAGGAGACCTT...AAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGGGGTTTAGGTGTGGGTaGGCTTGCCAGGCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LFSAGRHQALLVVGSWAGGFRCG*ACQASS Trigger: AGAAGAAGCCTGGCAAGCTCACCCACACCTAAACCC...CCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGAACAG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | CACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTCTCGTCGTGGGTTCTTaGGCAGGGCCAGGGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: HSWQGVTGSLQVVGWKRVLVVGS*AGPGLG Trigger: GCCCAGCCCTGGCCCTGCCCAAGAACCCACGACGAG...AACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCAGGGGATGGCTTTGTaGGCAAGGTCTCCTCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: AWGRSQGVWEGPTALNFSQGMAL*ARSPPH Trigger: ATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTG...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTAGGCTCTTCTCGTCGTaGGTTCTTGGGCAGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TTLRTLWKSRRCPGLLRTRLFSS*VLGQGQ Trigger: CTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCT...AGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCCCATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTAACTTCTCTCTGTGCTaGCAGGGGATGGCTTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TPIQCWGKEPRALHMLGSNFSLC*QGMALW Trigger: CCACAAAGCCATCCCCTGTCAGCACAGAGAGAAGTT...ACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCTCGTCGTGGGTTCTTaGGCAGGGCCAGGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VTGSLQVVGWKRVFLFLVLVVGS*AGPGLG Trigger: GCCCAGCCCTGGCCCTGCCCAAGAACCCACGACGAG...GACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR TCA 90 bp | ACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGGGTTTAGGTGTGGGTaGGCTTGCCAGGCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: TTLRTLWKSRRCPGLLRTGFRCG*ACQASS Trigger: AGAAGAAGCCTGGCAAGCTCACCCACACCTAAACCC...AGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGTCCATGGTTTACTTaGAAGTGCATTGGCCGCCTT | + |
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Preference number: 2 (lower is better) Translates to: TPIQCWGKEPRALHMLGSGPWFT*KCIGRL Trigger: AAGGCGGCCAATGCACTTCCAAGTAAACCATGGACC...ACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR-3UTR CCA 90 bp | AACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGCACAACTGTTCTCTGCTaGACGGCACCAGGCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NPSDPVEIKTLSRPPENCTTVLC*TAPGSS Trigger: AGAAGAGCCTGGTGCCGTCCAGCAGAGAACAGTTGT...GCAGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR GCA 90 bp | ATCGACTTCCACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTACTACAACTGTTCTCTaGTGGACGGCACCAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: IDFHNPSDPVEIKTLSRPTTTVL*WTAPGS Trigger: AGAGCCTGGTGCCGTCCAGCAGAGAACAGTTGTAGT...AGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGTGGAAGTCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTTCGGTTAGAAGGCTGTaGTCCATGGTTTACTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TPIQCWGKEPRALHMLGSSVRRL*SMVYLE Trigger: TTCCAAGTAAACCATGGACCACAGCCTTCTAACCGA...ACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR CAA 90 bp | ACTCATTCTGGAACATGCCATCTGACCTCGCATGGTTTCTTGAGATaGGGAGGAGGTATCCAGCCTGGGCCCCACGGAGATAGTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: THSGTCHLTSHGFLR*GGGIQPGPHGDSEK Trigger: CTTCTCACTATCTCCGTGGGGCCCAGGCTGGATACCTCCTCCCAATCTCAAGAAACCATGCGAGGTCAGATGGCATGTTCCAGAATGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTTCGGTTAGAAGGCTGTaGTCCATGGTTTACTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: HTVLGEGTQGPPYARQWLSVRRL*SMVYLE Trigger: TTCCAAGTAAACCATGGACCACAGCCTTCTAACCGA...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTACCCTTCGGACCCTGTaGAAATCAAGACGCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: MAGCYWEPASCWVEKGFPTLRTL*KSRRCP Trigger: GGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGT...AGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | CATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGAGGAGACAAGATCCCTaGCTCGGCTGTGCTCATCTT | + |
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Preference number: 2 (lower is better) Translates to: HHSWQGVTGSLQVVGWKRRRQDP*LGCAHL Trigger: AAGATGAGCACAGCCGAGCCAGGGATCTTGTCTCCT...CCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR CAA 90 bp | GCACTGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTaGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: ALHITHGRVLLGACK*LGGKGFSCSLSLSF Trigger: GAAGGAAAGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTCCTCGCATGGTTTCTTaGGATTGGGAGGAGGTATCC | + |
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Preference number: 2 (lower is better) Translates to: MAGCYWEPASCWVEKGFPPRMVS*DWEEVS Trigger: GGATACCTCCTCCCAATCTCAAGAAACCATGCGAGG...AGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR CAA 90 bp | CTGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTaGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTTTCCTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: LHITHGRVLLGACKL*GGKGFSCSLSLSFN Trigger: GTTGAAGGAAAGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR GCA 90 bp | GTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCACTACAACTGTTCTCTaGTGGACGGCACCAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VTGSLQVVGWKRVFLFLVTTTVL*WTAPGS Trigger: AGAGCCTGGTGCCGTCCAGCAGAGAACAGTTGTAGT...GACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGACTCATTCTGGAACATaGCATCTGACCTCGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: ITHGRVLLGACKLLGGKGTHSGT*HLTSHG Trigger: ACCATGCGAGGTCAGATGGCATGTTCCAGAATGAGT...CCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTGGGAAGCACTCATTCTaGAACATGCCATCTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: TGSLQVVGWKRVFLFLVPGKHSF*NMPSDL Trigger: GAGGTCAGATGGCATGTTCCAGAATGAGTGCTTCCC...AGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGTTCCTTGTCCCTTTCCTTCAACAGCAAGATGTAGGTAGTGGGAAGCACCCTCGCATGGTTTCTTaGGATTGGGAGGAGGTATCC | + |
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Preference number: 2 (lower is better) Translates to: FLFLVPFLQQQDVGSGKHPRMVS*DWEEVS Trigger: GGATACCTCCTCCCAATCTCAAGAAACCATGCGAGG...GTGCTTCCCACTACCTACATCTTGCTGTTGAAGGAAAGGGACAAGGAACAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGCGGCCTCCTGAGAACTaGAATGAGACATCCAAAATC | + |
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Preference number: 2 (lower is better) Translates to: VLLGACKLLGGKGFSCSLRPPEN*NETSKI Trigger: GATTTTGGATGTCTCATTGCAGTTCTCAGGAGGCCG...CAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGACAGGGGATGGCTTTGTaGGCAAGGTCTCCTCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: GFTIEPSVFPALKTFLERQGMAL*ARSPPH Trigger: ATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTG...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR-3UTR CAA 90 bp | ACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTTCTCGTCGTGGGTTCTaGGGCAGGGCCAGGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: TTLRTLWKSRRCPGLLRTSRRGF*GRARAG Trigger: CCCAGCCCTGGCCCTGCCCAAGAACCCACGACGAGA...AGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR GCA 72 bp | CGGTTAGAAGGCTGTGGTCCATGGTTTACTTGGAAGTaGATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCC | + |
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Preference number: 3 (lower is better) Translates to: RLEGCGPWFTWK*IGRLPTGLPRA Trigger: GGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACTTCCAAGTAAACCATGGACCACAGCCTTCTAACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR TCA 72 bp | TGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTaGCAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: WEGPTALNFSLC*QGMALWARSPP Trigger: AGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR TCA 72 bp | GAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTaGACTTCTCTCTGTGCTGACAGGGGATGGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: EGVRGCGRAQQL*TSLCADRGWLC Trigger: ACAAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR CCA 72 bp | AGAAGGCTGTGGTCCATGGTTTACTTGGAAGTGCATTaGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: RRLWSMVYLEVH*PPSHRPPSSLL Trigger: CAAGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACTTCCAAGTAAACCATGGACCACAGCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR CCA 72 bp | ACACTTCGGTTAGAAGGCTGTGGTCCATGGTTTACTTaGAAGTGCATTGGCCGCCTTCCCACAGGCCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: TLRLEGCGPWFT*KCIGRLPTGLP Trigger: AGGGAGGCCTGTGGGAAGGCGGCCAATGCACTTCCAAGTAAACCATGGACCACAGCCTTCTAACCGAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR GCA 72 bp | CTGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTaGAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: LHITHGRVLLGA*KLLGGKGFSCS Trigger: GGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR CCA 72 bp | AGAAGGCTCACACTTCGGTTAGAAGGCTGTGGTCCATaGTTTACTTGGAAGTGCATTGGCCGCCTTCCCACA | + |
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Preference number: 3 (lower is better) Translates to: RRLTLRLEGCGP*FTWKCIGRLPT Trigger: TGTGGGAAGGCGGCCAATGCACTTCCAAGTAAACCATGGACCACAGCCTTCTAACCGAAGTGTGAGCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR CCA 72 bp | AAGCACTCATTCTGGAACATGCCATCTGACCTCGCATaGTTTCTTGAGATTGGGAGGAGGTATCCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: KHSFWNMPSDLA*FLEIGRRYPAW Trigger: CCAGGCTGGATACCTCCTCCCAATCTCAAGAAACCATGCGAGGTCAGATGGCATGTTCCAGAATGAGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| 3UTR TCA 72 bp | CAGGGCCCTCCATATGCTAGGCAGTGGCTTTACCATTaGGCCATCTGTATTCCCAGCTCTGAAAACGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QGPPYARQWLYH*AICIPSSENVL Trigger: AAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCCACTGCCTAGCATATGGAGGGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAACTTTTGGACCAGATGATTTACTTGGAAGTGCATaGGCCGCCTTCCCACAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVFPALKTFLERTFGPDDLLGSA*AAFPQA Trigger: GGCCTGTGGGAAGGCGGCCAATGCACTTCCAAGTAA...ATCATCTGGTCCAAAAGTTCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR GCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTTGCACCCGTCCGGGCTaGCGCATCAGGACCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTVLGEGTQGPPYARQWLCTRPG*RIRTVA Trigger: GGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCA...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | TGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGCCAGGGCTGGGTGGCACAGGAGACTGTaGGCTTTGCTCCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WTAPGSSRRGFLGRARAGWHRRL*ALLHHC Trigger: GCAGTGGTGGAGCAAAGCCCACAGTCTCCTGTGCCA...CCCAGCCCTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | TGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGCCAGGGCTGGGTCAGGAAGCCGATCTTaGGAATGTTCTGCACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTAPGSSRRGFLGRARAGSGSRS*ECSAPR Trigger: CCGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGA...CCCAGCCCTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGCTTTTGCACCCGTCCGGGCTaGCGCATCAGGACCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGPNSSELLSVLTGDGFCTRPG*RIRTVA Trigger: GGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCA...AAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 |
||
| CDS-3UTR GCA 90 bp | CATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGTGCACCCGTCCGGGCTaGCGCATCAGGACCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HHSWQGVTGSLQVVGWKRCTRPG*RIRTVA Trigger: GGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCA...CCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR GCA 90 bp | CACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTGCACCCGTCCGGGCTaGCGCATCAGGACCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSWQGVTGSLQVVGWKRVCTRPG*RIRTVA Trigger: GGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCA...AACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR GCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTGGTCTCCTCCGCCCCTaGGAAGGGCGCCCACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: HTVLGEGTQGPPYARQWLGLLRP*EGRPQF Trigger: AAATTGTGGGCGCCCTTCGCAGGGGCGGAGGAGACC...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGGCCGCATCAGGACCGTaGCCTTCATCAGGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFSAGRHQALLVVGSWAGAASGP*PSSGCL Trigger: TAAGCAGCCTGATGAAGGCCACGGTCCTGATGCGGC...CCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGTGGCACAGGAGACTGTaGGCTTTGCTCCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGWHRRL*ALLHHC Trigger: GCAGTGGTGGAGCAAAGCCCACAGTCTCCTGTGCCA...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCTTGTGAGCAGGAGGTTCTGGATCCTCTGCTaGCACAGGAGACTGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SALAAFPQASLEPLVSRRFWILC*HRRLWA Trigger: AGCCCACAGTCTCCTGTGCCAGCAGAGGATCCAGAA...CCTCCTGCTCACAAGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGCCAGGGTGAAAGAGCTCGGTaGGCTCTTTGCGACAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLDGTRLFSSWVLGQGQGERAR*ALCDNP Trigger: AGGATTGTCGCAAAGAGCTCACCGAGCTCTTTCACC...CTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGAGGCAGCTTCTCTTTaGTGGTCCGGTGTGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDEAASL*WSGVGR Trigger: TCGACCCACACCGGACCATCAAAGAGAAGCTGCCTC...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCCATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGAGGCAGCTTCTCTTTaGTGGTCCGGTGTGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPIQCWGKEPRALHMLGSEAASL*WSGVGR Trigger: TCGACCCACACCGGACCATCAAAGAGAAGCTGCCTC...ACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGTCAGGAAGCCGATCTTaGGAATGTTCTGCACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGSGSRS*ECSAPR Trigger: CCGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGA...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTTGGCACAGGAGACTGTaGGCTTTGCTCCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AWGRSQGVWEGPTALNFSWHRRL*ALLHHC Trigger: GCAGTGGTGGAGCAAAGCCCACAGTCTCCTGTGCCA...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATTGGCACAGGAGACTGTaGGCTTTGCTCCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDWHRRL*ALLHHC Trigger: GCAGTGGTGGAGCAAAGCCCACAGTCTCCTGTGCCA...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGGCGATCTGGACTTTCTaGATCCTCTGCTGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGAIWTF*ILCWHR Trigger: CCTGTGCCAGCAGAGGATCCAGAAAGTCCAGATCGC...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | TGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGCCAGGGCTGGGATGTGGATGTTGGGGTaGAACACTTTCATCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTAPGSSRRGFLGRARAGMWMLG*NTFICR Trigger: CCGACAGATGAAAGTGTTCCACCCCAACATCCACAT...CCCAGCCCTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGGGTGAAAGAGCTCGGTaGGCTCTTTGCGACAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGGERAR*ALCDNP Trigger: AGGATTGTCGCAAAGAGCTCACCGAGCTCTTTCACC...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTGAGGCAGCTTCTCTTTaGTGGTCCGGTGTGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HTVLGEGTQGPPYARQWLEAASL*WSGVGR Trigger: TCGACCCACACCGGACCATCAAAGAGAAGCTGCCTC...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATTCAGGAAGCCGATCTTaGGAATGTTCTGCACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDSGSRS*ECSAPR Trigger: CCGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGA...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTTCAGGAAGCCGATCTTaGGAATGTTCTGCACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AWGRSQGVWEGPTALNFSSGSRS*ECSAPR Trigger: CCGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGA...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR GCA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGACTTTCTGGATCCTCTaGTGGCACAGGAGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGTFWIL*WHRRLW Trigger: CCACAGTCTCCTGTGCCAGCAGAGGATCCAGAAAGT...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGCCCGGCCTGAGCTTTGATGGTCCGGTGTaGGTCGATCTCAATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WLCGQGLLLMAEAGPGLSFDGPV*VDLNGI Trigger: TATCCCATTGAGATCGACCCACACCGGACCATCAAA...GCTCAGGCCGGGCCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CCA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTTTCTGGATCCTCTGCTaGCACAGGAGACTGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWGRSQGVWEGPTALNFSFWILC*HRRLWA Trigger: AGCCCACAGTCTCCTGTGCCAGCAGAGGATCCAGAA...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCCATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGTGAAAGAGCTCGGTaGGCTCTTTGCGACAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPIQCWGKEPRALHMLGSGERAR*ALCDNP Trigger: AGGATTGTCGCAAAGAGCTCACCGAGCTCTTTCACC...ACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR TCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGTGAAAGAGCTCGGTaGGCTCTTTGCGACAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDGERAR*ALCDNP Trigger: AGGATTGTCGCAAAGAGCTCACCGAGCTCTTTCACC...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | ACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGAGGCAGCTTCTCTTTaGTGGTCCGGTGTGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TTLRTLWKSRRCPGLLRTEAASL*WSGVGR Trigger: TCGACCCACACCGGACCATCAAAGAGAAGCTGCCTC...AGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGTCACCAATGCCCGCTaGGAAGATGAAAAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDVTNAR*EDEKGD Trigger: ATCCCCCTTTTCATCTTCTCAGCGGGCATTGGTGAC...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR GCA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTACTTTCTGGATCCTCTaGTGGCACAGGAGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWGRSQGVWEGPTALNFSTFWIL*WHRRLW Trigger: CCACAGTCTCCTGTGCCAGCAGAGGATCCAGAAAGT...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTTTCTGGATCCTCTGCTaGCACAGGAGACTGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTVLGEGTQGPPYARQWLFWILC*HRRLWA Trigger: AGCCCACAGTCTCCTGTGCCAGCAGAGGATCCAGAA...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTGCGATCTGGACTTTCTaGATCCTCTGCTGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTVLGEGTQGPPYARQWLAIWTF*ILCWHR Trigger: CCTGTGCCAGCAGAGGATCCAGAAAGTCCAGATCGC...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCTTGTGAGCAGGAGGATGTGGATGTTGGGGTaGAACACTTTCATCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SALAAFPQASLEPLVSRRMWMLG*NTFICR Trigger: CCGACAGATGAAAGTGTTCCACCCCAACATCCACAT...CCTCCTGCTCACAAGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGTTGCTGGAAGTAGCTaGAGTTCTCACACACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDVAGSS*SSHTRS Trigger: GCTCCGTGTGTGAGAACTCCAGCTACTTCCAGCAAC...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCCATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGTTGCTGGAAGTAGCTaGAGTTCTCACACACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPIQCWGKEPRALHMLGSVAGSS*SSHTRS Trigger: GCTCCGTGTGTGAGAACTCCAGCTACTTCCAGCAAC...ACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTGTCACCAATGCCCGCTaGGAAGATGAAAAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HTVLGEGTQGPPYARQWLVTNAR*EDEKGD Trigger: ATCCCCCTTTTCATCTTCTCAGCGGGCATTGGTGAC...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGCCCGGCCTGAGCGTGGGTCGATCTCAATaGGATAATAGTGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLCGQGLLLMAEAGPGLSVGRSQ*DNSGER Trigger: TCTTTCACCACTATTATCCCATTGAGATCGACCCAC...GCTCAGGCCGGGCCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGCTTTGCGATCTGGACTTTCTaGATCCTCTGCTGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGPNSSELLSVLTGDGFAIWTF*ILCWHR Trigger: CCTGTGCCAGCAGAGGATCCAGAAAGTCCAGATCGC...AAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | ACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGCGATCTGGACTTTCTaGATCCTCTGCTGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTLRTLWKSRRCPGLLRTAIWTF*ILCWHR Trigger: CCTGTGCCAGCAGAGGATCCAGAAAGTCCAGATCGC...AGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| 3UTR CAA 72 bp | GGAACATGCCATCTGACCTCGCATGGTTTCTTGAGATaGGGAGGAGGTATCCAGCCTGGGCCCCACGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTCHLTSHGFLR*GGGIQPGPHGD Trigger: ATCTCCGTGGGGCCCAGGCTGGATACCTCCTCCCAATCTCAAGAAACCATGCGAGGTCAGATGGCATGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | ACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGGTGAAAGAGCTCGGTaGGCTCTTTGCGACAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTLRTLWKSRRCPGLLRTGERAR*ALCDNP Trigger: AGGATTGTCGCAAAGAGCTCACCGAGCTCTTTCACC...AGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | ACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGTCACCAATGCCCGCTaGGAAGATGAAAAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTLRTLWKSRRCPGLLRTVTNAR*EDEKGD Trigger: ATCCCCCTTTTCATCTTCTCAGCGGGCATTGGTGAC...AGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTGGAATCCATCCTCACTaGAGTCCATGTAGTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AWGRSQGVWEGPTALNFSGIHPH*SPCSWT Trigger: TGTCCAACTACATGGACTTCAGTGAGGATGGATTCC...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGAATCCATCCTCACTaGAGTCCATGTAGTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDGIHPH*SPCSWT Trigger: TGTCCAACTACATGGACTTCAGTGAGGATGGATTCC...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCTTGTGAGCAGGAGGGTGGGTCGATCTCAATaGGATAATAGTGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SALAAFPQASLEPLVSRRVGRSQ*DNSGER Trigger: TCTTTCACCACTATTATCCCATTGAGATCGACCCAC...CCTCCTGCTCACAAGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGCCAGGTGGGTCGATCTCAATaGGATAATAGTGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLDGTRLFSSWVLGQGQVGRSQ*DNSGER Trigger: TCTTTCACCACTATTATCCCATTGAGATCGACCCAC...CTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATTTTGATGGTCCGGTGTaGGTCGATCTCAATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GGVGGPNSSELLSVLTGDFDGPV*VDLNGI Trigger: TATCCCATTGAGATCGACCCACACCGGACCATCAAA...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | CACTACAACTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGCGATCTGGACTTTCTaGATCCTCTGCTGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HYNCSLLDGTRLFSSWVLAIWTF*ILCWHR Trigger: CCTGTGCCAGCAGAGGATCCAGAAAGTCCAGATCGC...AAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGAACAGTTGTAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTATGTGGATGTTGGGGTaGAACACTTTCATCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPIQCWGKEPRALHMLGSMWMLG*NTFICR Trigger: CCGACAGATGAAAGTGTTCCACCCCAACATCCACAT...ACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGCTTTGTTGCTGGAAGTAGCTaGAGTTCTCACACACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGPNSSELLSVLTGDGFVAGSS*SSHTRS Trigger: GCTCCGTGTGTGAGAACTCCAGCTACTTCCAGCAAC...AAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| 3UTR CAA 72 bp | CATTCTGGAACATGCCATCTGACCTCGCATGGTTTCTaGAGATTGGGAGGAGGTATCCAGCCTGGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGTCHLTSHGF*RLGGGIQPGPH Trigger: GTGGGGCCCAGGCTGGATACCTCCTCCCAATCTCAAGAAACCATGCGAGGTCAGATGGCATGTTCCAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGCCCGGCCTGAGCCATTGTAAGCAAATCTaGTCAGGGTCATGTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WLCGQGLLLMAEAGPGLSHCKQI*SGSCQN Trigger: ATTTTGACATGACCCTGAGCAGATTTGCTTACAATG...GCTCAGGCCGGGCCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGACTTTCTGGATCCTCTaGTGGCACAGGAGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAHHSWQGVTGSLQVVGWTFWIL*WHRRLW Trigger: CCACAGTCTCCTGTGCCAGCAGAGGATCCAGAAAGT...CCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTTTTGATGGTCCGGTGTaGGTCGATCTCAATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HTVLGEGTQGPPYARQWLFDGPV*VDLNGI Trigger: TATCCCATTGAGATCGACCCACACCGGACCATCAAA...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGGTTGCTGGAAGTAGCTaGAGTTCTCACACACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAHHSWQGVTGSLQVVGWVAGSS*SSHTRS Trigger: GCTCCGTGTGTGAGAACTCCAGCTACTTCCAGCAAC...CCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | CACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTGTCACCAATGCCCGCTaGGAAGATGAAAAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSWQGVTGSLQVVGWKRVVTNAR*EDEKGD Trigger: ATCCCCCTTTTCATCTTCTCAGCGGGCATTGGTGAC...AACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGCTTTGGAATCCATCCTCACTaGAGTCCATGTAGTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VGGPNSSELLSVLTGDGFGIHPH*SPCSWT Trigger: TGTCCAACTACATGGACTTCAGTGAGGATGGATTCC...AAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCTTGTGAGCAGGAGGCATTGTAAGCAAATCTaGTCAGGGTCATGTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SALAAFPQASLEPLVSRRHCKQI*SGSCQN Trigger: ATTTTGACATGACCCTGAGCAGATTTGCTTACAATG...CCTCCTGCTCACAAGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCGCCGCATCAGGACCGTaGCCTTCATCAGGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLQVVGWKRVFLFLVAASGP*PSSGCL Trigger: TAAGCAGCCTGATGAAGGCCACGGTCCTGATGCGGC...GACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACTCATTCTGGAACATGCCATCTGACCTCGCATGGTTTCTTGAGATTGGGGAGGCAGCTTCTCTTTaGTGGTCCGGTGTGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KHSFWNMPSDLAWFLEIGEAASL*WSGVGR Trigger: TCGACCCACACCGGACCATCAAAGAGAAGCTGCCTC...CCCAATCTCAAGAAACCATGCGAGGTCAGATGGCATGTTCCAGAATGAGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCTCAGGAAGCCGATCTTaGGAATGTTCTGCACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLQVVGWKRVFLFLVSGSRS*ECSAPR Trigger: CCGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGA...GACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | TGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTTGGCACAGGAGACTGTaGGCTTTGCTCCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CYWEPASCWVEKGFPVPCWHRRL*ALLHHC Trigger: GCAGTGGTGGAGCAAAGCCCACAGTCTCCTGTGCCA...ACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CCA 90 bp | GTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCTTCTGGATCCTCTGCTaGCACAGGAGACTGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLQVVGWKRVFLFLVFWILC*HRRLWA Trigger: AGCCCACAGTCTCCTGTGCCAGCAGAGGATCCAGAA...GACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CCA 90 bp | CACTACAACTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTATGTGGATGTTGGGGTaGAACACTTTCATCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HYNCSLLDGTRLFSSWVLMWMLG*NTFICR Trigger: CCGACAGATGAAAGTGTTCCACCCCAACATCCACAT...AAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGAACAGTTGTAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTGCTGGAAGTAGCTaGAGTTCTCACACACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MAGCYWEPASCWVEKGFPVAGSS*SSHTRS Trigger: GCTCCGTGTGTGAGAACTCCAGCTACTTCCAGCAAC...AGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR GCA 90 bp | GTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCACTTTCTGGATCCTCTaGTGGCACAGGAGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLQVVGWKRVFLFLVTFWIL*WHRRLW Trigger: CCACAGTCTCCTGTGCCAGCAGAGGATCCAGAAAGT...GACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGCTTTTTATCCAGAATATTGTaGGAAGAAGGGCATCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGGPNSSELLSVLTGDGFLSRIL*EEGHRC Trigger: ACAGCGATGCCCTTCTTCCCACAATATTCTGGATAA...AAAGCCATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CCA 90 bp | TGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTTTCTGGATCCTCTGCTaGCACAGGAGACTGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CYWEPASCWVEKGFPVPCFWILC*HRRLWA Trigger: AGCCCACAGTCTCCTGTGCCAGCAGAGGATCCAGAA...ACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| 3UTR CAA 72 bp | ACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTaGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: THGRVLLGACKL*GGKGFSCSLSL Trigger: AAGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| 3UTR CAA 72 bp | ATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTaGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITHGRVLLGACK*LGGKGFSCSLS Trigger: GGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | ACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTTTTGATGGTCCGGTGTaGGTCGATCTCAATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TGSLQVVGWKRVFLFLVPFDGPV*VDLNGI Trigger: TATCCCATTGAGATCGACCCACACCGGACCATCAAA...AGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGGGAATCCATCCTCACTaGAGTCCATGTAGTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLLGACKLLGGKGFSCSLGIHPH*SPCSWT Trigger: TGTCCAACTACATGGACTTCAGTGAGGATGGATTCC...CAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCTTTGATGGTCCGGTGTaGGTCGATCTCAATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLQVVGWKRVFLFLVFDGPV*VDLNGI Trigger: TATCCCATTGAGATCGACCCACACCGGACCATCAAA...GACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAGTCACCAATGCCCGCTaGGAAGATGAAAAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFTIEPSVFPALKTFLERVTNAR*EDEKGD Trigger: ATCCCCCTTTTCATCTTCTCAGCGGGCATTGGTGAC...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR TCA 90 bp | TGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTGGAATCCATCCTCACTaGAGTCCATGTAGTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CYWEPASCWVEKGFPVPCGIHPH*SPCSWT Trigger: TGTCCAACTACATGGACTTCAGTGAGGATGGATTCC...ACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCACATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGCATTGTAAGCAAATCTaGTCAGGGTCATGTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAHHSWQGVTGSLQVVGWHCKQI*SGSCQN Trigger: ATTTTGACATGACCCTGAGCAGATTTGCTTACAATG...CCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATGTGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAACTTTCTGGATCCTCTaGTGGCACAGGAGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFTIEPSVFPALKTFLERTFWIL*WHRRLW Trigger: CCACAGTCTCCTGTGCCAGCAGAGGATCCAGAAAGT...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAACTTTTGGACCAGATGATGCCGCATCAGGACCGTaGCCTTCATCAGGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVFPALKTFLERTFGPDDAASGP*PSSGCL Trigger: TAAGCAGCCTGATGAAGGCCACGGTCCTGATGCGGC...ATCATCTGGTCCAAAAGTTCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092688.12 |
||
| CDS-3UTR CCA 90 bp | TGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTGTGGGTCGATCTCAATaGGATAATAGTGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CYWEPASCWVEKGFPVPCVGRSQ*DNSGER Trigger: TCTTTCACCACTATTATCCCATTGAGATCGACCCAC...ACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAATGTGGATGTTGGGGTaGAACACTTTCATCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GFTIEPSVFPALKTFLERMWMLG*NTFICR Trigger: CCGACAGATGAAAGTGTTCCACCCCAACATCCACAT...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGATTATCCAGAATATTGTaGGAAGAAGGGCATCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFTIEPSVFPALKTFLERLSRIL*EEGHRC Trigger: ACAGCGATGCCCTTCTTCCCACAATATTCTGGATAA...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAGTGGGTCGATCTCAATaGGATAATAGTGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFTIEPSVFPALKTFLERVGRSQ*DNSGER Trigger: TCTTTCACCACTATTATCCCATTGAGATCGACCCAC...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
||
| CDS GCA 90 bp | TGCAGGCGGTCTCCTCCGCCCCTGCGAAGGGCGCCCACAATTTCCTaGACCCGTCCGGGCTGCCGCATCAGGACCGTGGCCTTCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRRSPPPLRRAPTIS*TRPGCRIRTVAFIR Trigger: CCTGATGAAGGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCAGGAAATTGTGGGCGCCCTTCGCAGGGGCGGAGGAGACCGCCTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS GCA 90 bp | CCGCCCCTGCGAAGGGCGCCCACAATTTCCTGCACCCGTCCGGGCTaGCGCATCAGGACCGTGGCCTTCATCAGGCTGCTTACCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPLRRAPTISCTRPG*RIRTVAFIRLLTSS Trigger: GGAGGAGGTAAGCAGCCTGATGAAGGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCAGGAAATTGTGGGCGCCCTTCGCAGGGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000107398.8 ENSMUST00000107399.9 |
||
| CDS GCA 90 bp | TCATGTCAAAATCGGAAATCACCTGCAGGCGGTCTCCTCCGCCCCTaGGAAGGGCGCCCACAATTTCCTGCACCCGTCCGGGCTGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCQNRKSPAGGLLRP*EGRPQFPAPVRAAA Trigger: TGCGGCAGCCCGGACGGGTGCAGGAAATTGTGGGCGCCCTTCGCAGGGGCGGAGGAGACCGCCTGCAGGTGATTTCCGATTTTGACATGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCGCCGCTCCTCCACCTaGTCATTCAGGAAGCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: AWGRSQGVWEGPTALNFSRRSST*SFRKPI Trigger: GATCGGCTTCCTGAATGACAAGGTGGAGGAGCGGCG...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGTTCAGGAAGCCGATCTaGAGAATGTTCTGCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGFRKPI*RMFCTP Trigger: CGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGAA...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGCCAGCTGTTATCCAGAATATaGTGGGAAGAAGGGCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLDGTRLFSSWVLGQGQLLSRI*WEEGHR Trigger: GCGATGCCCTTCTTCCCACAATATTCTGGATAACAG...CTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGAGCTCGGTGAGCTCTTaGCGACAATCCTCACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGSSVSS*RQSSLI Trigger: TATCAGTGAGGATTGTCGCAAAGAGCTCACCGAGCT...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | AGTGCATTGGCCGCCTTCCCACAGGCCTCCCTCGAGCCTCTTGTGAGCAGGAGGGACACAATGTGGATGTaGGGGTGGAACACTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SALAAFPQASLEPLVSRRDTMWM*GWNTFI Trigger: GATGAAAGTGTTCCACCCCAACATCCACATTGTGTC...CCTCCTGCTCACAAGAGGCTCGAGGGAGGCCTGTGGGAAGGCGGCCAATGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCTGGACGGCACCAGGCTCTTCTCGTCGTGGGTTCTTGGGCAGGGCCAGGACACAATGTGGATGTaGGGGTGGAACACTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SLLDGTRLFSSWVLGQGQDTMWM*GWNTFI Trigger: GATGAAAGTGTTCCACCCCAACATCCACATTGTGTC...CTGGCCCTGCCCAAGAACCCACGACGAGAAGAGCCTGGTGCCGTCCAGCAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | GCTGACAGGGGATGGCTTTGTGGGCAAGGTCTCCTCCTCATGGCTGAGGCAGGGCTGTTATCCAGAATATaGTGGGAAGAAGGGCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: ADRGWLCGQGLLLMAEAGLLSRI*WEEGHR Trigger: GCGATGCCCTTCTTCCCACAATATTCTGGATAACAG...CCCTGCCTCAGCCATGAGGAGGAGACCTTGCCCACAAAGCCATCCCCTGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTAGCTCGGTGAGCTCTTaGCGACAATCCTCACTGATA | + |
|
Preference number: 5 (lower is better) Translates to: AWGRSQGVWEGPTALNFSSSVSS*RQSSLI Trigger: TATCAGTGAGGATTGTCGCAAAGAGCTCACCGAGCT...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTTTCAGGAAGCCGATCTaGAGAATGTTCTGCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HTVLGEGTQGPPYARQWLFRKPI*RMFCTP Trigger: CGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGAA...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | AACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGCTTCAGGAAGCCGATCTaGAGAATGTTCTGCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NPSDPVEIKTLSRPPENCFRKPI*RMFCTP Trigger: CGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGAA...GCAGTTCTCAGGAGGCCGGGACAGCGTCTTGATTTCCACAGGGTCCGAAGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATCTGTTATCCAGAATATaGTGGGAAGAAGGGCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: GGVGGPNSSELLSVLTGDLLSRI*WEEGHR Trigger: GCGATGCCCTTCTTCCCACAATATTCTGGATAACAG...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGACACAATGTGGATGTaGGGGTGGAACACTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GGVGGPNSSELLSVLTGDDTMWM*GWNTFI Trigger: GATGAAAGTGTTCCACCCCAACATCCACATTGTGTC...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | GGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTCTGTGCTGACAGGGGATGGTCTTGTTCTGAAGTaGCTGGAAGTAGCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGVGGPNSSELLSVLTGDGLVLK*LEVAGV Trigger: AACTCCAGCTACTTCCAGCAACTTCAGAACAAGACC...ATCCCCTGTCAGCACAGAGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | GCATGGGGAAGGAGTCAGGGGGTGTGGGAGGGCCCAACAGCTCTGAACTTCTCTGGTCTTGTTCTGAAGTaGCTGGAAGTAGCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AWGRSQGVWEGPTALNFSGLVLK*LEVAGV Trigger: AACTCCAGCTACTTCCAGCAACTTCAGAACAAGACC...AGAGAAGTTCAGAGCTGTTGGGCCCTCCCACACCCCCTGACTCCTTCCCCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | CATACAGTGCTGGGGGAAGGAACCCAGGGCCCTCCATATGCTAGGCAGTGGCTTGACACAATGTGGATGTaGGGGTGGAACACTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HTVLGEGTQGPPYARQWLDTMWM*GWNTFI Trigger: GATGAAAGTGTTCCACCCCAACATCCACATTGTGTC...AAGCCACTGCCTAGCATATGGAGGGCCCTGGGTTCCTTCCCCCAGCACTGTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS CCA 90 bp | CCACCACTGCACCATGTGAGGCAGCTTCTCTTTGATGGTCCGGTGTaGGTCGATCTCAATGGGATAATAGTGGTGAAAGAGCTCGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPLHHVRQLLFDGPV*VDLNGIIVVKELGE Trigger: CTCACCGAGCTCTTTCACCACTATTATCCCATTGAGATCGACCCACACCGGACCATCAAAGAGAAGCTGCCTCACATGGTGCAGTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS TCA 90 bp | TGTGGGCTTTGCTCCACCACTGCACCATGTGAGGCAGCTTCTCTTTaGTGGTCCGGTGTGGGTCGATCTCAATGGGATAATAGTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CGLCSTTAPCEAASL*WSGVGRSQWDNSGE Trigger: TTCACCACTATTATCCCATTGAGATCGACCCACACCGGACCATCAAAGAGAAGCTGCCTCACATGGTGCAGTGGTGGAGCAAAGCCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS TCA 90 bp | TGTTGTTCTGGTAGAGTGTGTCGAAGAACGTCTTATAGCCCTCCCTaGGCATCGCAGTGGACTCTCCAACCACCTGAGCGATCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: CCSGRVCRRTSYSPP*ASQWTLQPPERSGL Trigger: AAGTCCAGATCGCTCAGGTGGTTGGAGAGTCCACTGCGATGCTCAGGGAGGGCTATAAGACGTTCTTCGACACACTCTACCAGAACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | ACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTCCCTTTCAGGAAGCCGATCTaGAGAATGTTCTGCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGSLQVVGWKRVFLFLVPFRKPI*RMFCTP Trigger: CGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGAA...AGGGACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | CATCACTCATGGCAGGGTGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGGTCTTGTTCTGAAGTaGCTGGAAGTAGCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HHSWQGVTGSLQVVGWKRGLVLK*LEVAGV Trigger: AACTCCAGCTACTTCCAGCAACTTCAGAACAAGACC...CCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACACCCTGCCATGAGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGACGCCGCTCCTCCACCTaGTCATTCAGGAAGCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GFTIEPSVFPALKTFLERRRSST*SFRKPI Trigger: GATCGGCTTCCTGAATGACAAGGTGGAGGAGCGGCG...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS GCA 90 bp | GAATATTGTGGGAAGAAGGGCATCGCTGTCCATTGTAAGCAAATCTaGTCAGGGTCATGTCAAAATCGGAAATCACCTGCAGGCGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EYCGKKGIAVHCKQI*SGSCQNRKSPAGGL Trigger: GAGACCGCCTGCAGGTGATTTCCGATTTTGACATGACCCTGAGCAGATTTGCTTACAATGGACAGCGATGCCCTTCTTCCCACAATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | TCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAACTTTTGGACCAGATGATCGCCGCTCCTCCACCTaGTCATTCAGGAAGCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: SVFPALKTFLERTFGPDDRRSST*SFRKPI Trigger: GATCGGCTTCCTGAATGACAAGGTGGAGGAGCGGCG...ATCATCTGGTCCAAAAGTTCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | TGTTACTGGGAGCCTGCAAGTTGTTGGGTGGAAAAGGGTTTTCCTGTTCCTTGTGACACAATGTGGATGTaGGGGTGGAACACTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CYWEPASCWVEKGFPVPCDTMWM*GWNTFI Trigger: GATGAAAGTGTTCCACCCCAACATCCACATTGTGTC...ACAAGGAACAGGAAAACCCTTTTCCACCCAACAACTTGCAGGCTCCCAGTAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | AAGCACTCATTCTGGAACATGCCATCTGACCTCGCATGGTTTCTTGAGATTGGGGGTCTTGTTCTGAAGTaGCTGGAAGTAGCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KHSFWNMPSDLAWFLEIGGLVLK*LEVAGV Trigger: AACTCCAGCTACTTCCAGCAACTTCAGAACAAGACC...CCCAATCTCAAGAAACCATGCGAGGTCAGATGGCATGTTCCAGAATGAGTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS-3UTR CAA 90 bp | GGCTTTACCATTGAGCCATCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGATTCAGGAAGCCGATCTaGAGAATGTTCTGCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GFTIEPSVFPALKTFLERFRKPI*RMFCTP Trigger: CGGGGTGCAGAACATTCTCAAGATCGGCTTCCTGAA...TCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGATGGCTCAATGGTAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS-3UTR CAA 90 bp | TCTGTATTCCCAGCTCTGAAAACGTTCTTAGAGAGAACTTTTGGACCAGATGATGGTCTTGTTCTGAAGTaGCTGGAAGTAGCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SVFPALKTFLERTFGPDDGLVLK*LEVAGV Trigger: AACTCCAGCTACTTCCAGCAACTTCAGAACAAGACC...ATCATCTGGTCCAAAAGTTCTCTCTAAGAACGTTTTCAGAGCTGGGAATACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 |
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| CDS GCA 72 bp | TCTCCTCCGCCCCTGCGAAGGGCGCCCACAATTTCCTaGACCCGTCCGGGCTGCCGCATCAGGACCGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPPPLRRAPTIS*TRPGCRIRTVA Trigger: GGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCAGGAAATTGTGGGCGCCCTTCGCAGGGGCGGAGGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS GCA 72 bp | CGAAGGGCGCCCACAATTTCCTGCACCCGTCCGGGCTaGCGCATCAGGACCGTGGCCTTCATCAGGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RRAPTISCTRPG*RIRTVAFIRLL Trigger: AAGCAGCCTGATGAAGGCCACGGTCCTGATGCGGCAGCCCGGACGGGTGCAGGAAATTGTGGGCGCCCTTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092688.12 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS GCA 72 bp | AATCGGAAATCACCTGCAGGCGGTCTCCTCCGCCCCTaGGAAGGGCGCCCACAATTTCCTGCACCCGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NRKSPAGGLLRP*EGRPQFPAPVR Trigger: CCGGACGGGTGCAGGAAATTGTGGGCGCCCTTCGCAGGGGCGGAGGAGACCGCCTGCAGGTGATTTCCGATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS GCA 72 bp | AATCTGCTCAGGGTCATGTCAAAATCGGAAATCACCTaGAGGCGGTCTCCTCCGCCCCTGCGAAGGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: NLLRVMSKSEIT*RRSPPPLRRAP Trigger: GGGCGCCCTTCGCAGGGGCGGAGGAGACCGCCTGCAGGTGATTTCCGATTTTGACATGACCCTGAGCAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS TCA 72 bp | AGGAGACTGTGGGCTTTGCTCCACCACTGCACCATGTaGGGCAGCTTCTCTTTGATGGTCCGGTGTGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RRLWALLHHCTM*GSFSLMVRCGS Trigger: CGACCCACACCGGACCATCAAAGAGAAGCTGCCTCACATGGTGCAGTGGTGGAGCAAAGCCCACAGTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS TCA 72 bp | GGTAGAGTGTGTCGAAGAACGTCTTATAGCCCTCCCTaGGCATCGCAGTGGACTCTCCAACCACCTGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: GRVCRRTSYSPP*ASQWTLQPPER Trigger: TCGCTCAGGTGGTTGGAGAGTCCACTGCGATGCTCAGGGAGGGCTATAAGACGTTCTTCGACACACTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS TCA 72 bp | TGCTCCACCACTGCACCATGTGAGGCAGCTTCTCTTTaGTGGTCCGGTGTGGGTCGATCTCAATGGGATAAT | + |
|
Preference number: 6 (lower is better) Translates to: CSTTAPCEAASL*WSGVGRSQWDN Trigger: ATTATCCCATTGAGATCGACCCACACCGGACCATCAAAGAGAAGCTGCCTCACATGGTGCAGTGGTGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS CAA 72 bp | GTCTCCCAGCAGGATGATGTTGGTCTTGTTCTGAAGTaGCTGGAAGTAGCTGGAGTTCTCACACACGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSQQDDVGLVLK*LEVAGVLTHGA Trigger: AGCTCCGTGTGTGAGAACTCCAGCTACTTCCAGCAACTTCAGAACAAGACCAACATCATCCTGCTGGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS CCA 72 bp | CACCATGTGAGGCAGCTTCTCTTTGATGGTCCGGTGTaGGTCGATCTCAATGGGATAATAGTGGTGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HHVRQLLFDGPV*VDLNGIIVVKE Trigger: CTCTTTCACCACTATTATCCCATTGAGATCGACCCACACCGGACCATCAAAGAGAAGCTGCCTCACATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS GCA 72 bp | GGGAAGAAGGGCATCGCTGTCCATTGTAAGCAAATCTaGTCAGGGTCATGTCAAAATCGGAAATCACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GKKGIAVHCKQI*SGSCQNRKSPA Trigger: TGCAGGTGATTTCCGATTTTGACATGACCCTGAGCAGATTTGCTTACAATGGACAGCGATGCCCTTCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092688.12 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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| CDS CAA 72 bp | TCGGTGAGCTCTTTGCGACAATCCTCACTGATAATTTaGCTGTTATCCAGAATATTGTGGGAAGAAGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVSSLRQSSLII*LLSRILWEEGH Trigger: ATGCCCTTCTTCCCACAATATTCTGGATAACAGCAAAATTATCAGTGAGGATTGTCGCAAAGAGCTCACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092688.12 ENSMUST00000092689.9 ENSMUST00000107397.2 ENSMUST00000107398.8 ENSMUST00000107399.9 |
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