Pregenerated sensors for NT5C3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029780Ensembl transcript IDs: ENSMUST00000031793.8, ENSMUST00000101367.9, ENSMUST00000135558.8, ENSMUST00000152447.9, ENSMUST00000205087.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCAGAGAGCGTCTTCTGCGCCCTTATACACCCACCTGGGAGAATaGCCTAGAAACTGCAGAACACCAAACTACAAAACTCACTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: IQRASSAPLYTHLGE*PRNCRTPNYKTHFG Trigger: TCCAAAGTGAGTTTTGTAGTTTGGTGTTCTGCAGTTTCTAGGGCATTCTCCCAGGTGGGTGTATAAGGGCGCAGAAGACGCTCTCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR TCA 90 bp | GCGCCCTTATACACCCACCTGGGAGAATGCCCTAGAAACTGCAGAACACCAAACAAAATGGACAGTGCCTaGCCCAGGTGTACCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: APLYTHLGECPRNCRTPNKMDSA*PRCTPG Trigger: CCCAGGGGTACACCTGGGTCAGGCACTGTCCATTTT...GTTTGGTGTTCTGCAGTTTCTAGGGCATTCTCCCAGGTGGGTGTATAAGGGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATACTCCACCCCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAAAAATGGACAGTGCCTaGCCCAGGTGTACCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SPYSTPISKLAVVKIRNIKMDSA*PRCTPG Trigger: CCCAGGGGTACACCTGGGTCAGGCACTGTCCATTTT...TATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGGGGTGGAGTATGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGGAGTCCCCGAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAAAGTCTGTTATTATCTaGAGTTTGGCAGCGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LGVPEQNDVAVVFQLAEVKSVII*SLAAPP Trigger: AGGAGGCGCTGCCAAACTTCAGATAATAACAGACTT...TACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTCGGGGACTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR GCA 90 bp | CCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATCCAGAGAGCCCTCAAAATGGACAGTaGCTGACCCAGGTGTACCCC | + |
|
Preference number: 2 (lower is better) Translates to: PISKLAVVKIRNIIHPESPQNGQ*LTQVYP Trigger: GGGGTACACCTGGGTCAGGCACTGTCCATTTTGAGG...GCTCTCTGGATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCGTGTTTGTTGAACACGTGGATTAACTCTCCTTTGAATCCTTTCAGCACTAAGTCTGTTATTATCTaGAGTTTGGCAGCGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PSCLLNTWINSPLNPFSTKSVII*SLAAPP Trigger: AGGAGGCGCTGCCAAACTTCAGATAATAACAGACTT...AGTGCTGAAAGGATTCAAAGGAGAGTTAATCCACGTGTTCAACAAACACGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCGTGTTTGTTGAACACGTGGATTAACTCTCCTTTGAATCCTTTCAGCACTCACTACTTTGACGTTTaGGTGATAAACTCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PSCLLNTWINSPLNPFSTHYFDV*VINSSL Trigger: CAGGCTGGAGTTTATCACTCAAACGTCAAAGTAGTG...AGTGCTGAAAGGATTCAAAGGAGAGTTAATCCACGTGTTCAACAAACACGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTTTCTGGTTTATTCTCAGTGCTTCACACAGAGTATTTGCAATGTTAGCCCTCAAAATGGACAGTaGCTGACCCAGGTGTACCCC | + |
|
Preference number: 2 (lower is better) Translates to: FLFLVYSQCFTQSICNVSPQNGQ*LTQVYP Trigger: GGGGTACACCTGGGTCAGGCACTGTCCATTTTGAGG...GCTAACATTGCAAATACTCTGTGTGAAGCACTGAGAATAAACCAGAAAAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATACTCCACCCCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAAGTCTTTCCTCAAAATaGACAGTGCCTGACCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SPYSTPISKLAVVKIRNISLSSK*TVPDPG Trigger: ACCTGGGTCAGGCACTGTCCATTTTGAGGAAAGACT...TATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGGGGTGGAGTATGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAGTCTGTATTCTTGCAAACCGTGAGATTTaGTATACCACTCTACCATGT | + |
|
Preference number: 2 (lower is better) Translates to: EQNDVAVVFQLAEVVCILANREI*YTTLPC Trigger: ACATGGTAGAGTGGTATACCAAATCTCACGGTTTGC...AAGAATACAGACTACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAGTCTGTATTCTTGTTCTTGATACGAACTaGGCTTTTCTGAAATTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EQNDVAVVFQLAEVVCILVLDTN*AFLKFW Trigger: CCAGAATTTCAGAAAAGCTCAGTTCGTATCAAGAAC...AAGAATACAGACTACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR GCA 90 bp | CCATCGTGTTTGTTGAACACGTGGATTAACTCTCCTTTGAATCCTTTCAGCACTTACTGCTCCTTTAGCTaGAGTAACTTTCTTCGACAT | + |
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Preference number: 2 (lower is better) Translates to: PSCLLNTWINSPLNPFSTYCSFS*SNFLRH Trigger: ATGTCGAAGAAAGTTACTGCAGCTAAAGGAGCAGTA...AGTGCTGAAAGGATTCAAAGGAGAGTTAATCCACGTGTTCAACAAACACGATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR CCA 90 bp | TACTCCACCCCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATAGTCTTTCCTCAAAATaGACAGTGCCTGACCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: YSTPISKLAVVKIRNIIHSLSSK*TVPDPG Trigger: ACCTGGGTCAGGCACTGTCCATTTTGAGGAAAGACT...ATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGGGGTGGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAGTCTGTATTCTTGCTTTTCTGAAATTCTaGCATCATTTTCAAATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: EQNDVAVVFQLAEVVCILAFLKF*HHFQMD Trigger: GTCCATTTGAAAATGATGCCAGAATTTCAGAAAAGC...AAGAATACAGACTACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152447.9 |
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| 3UTR CCA 72 bp | TCCAGAGAGCGTCTTCTGCGCCCTTATACACCCACCTaGGAGAATGCCCTAGAAACTGCAGAACACCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SRERLLRPYTPT*ENALETAEHQT Trigger: AGTTTGGTGTTCTGCAGTTTCTAGGGCATTCTCCCAGGTGGGTGTATAAGGGCGCAGAAGACGCTCTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR CCA 72 bp | ACATTGGCTACGCCATCGGCCATTCTTAGGTCTCCTTaGGAGTCCCCGAGCAGAATGATGTTGCTGTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLATPSAILRSP*ESPSRMMLLLS Trigger: AGACAACAGCAACATCATTCTGCTCGGGGACTCCCAAGGAGACCTAAGAATGGCCGATGGCGTAGCCAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR CAA 90 bp | GCGCCCTTATACACCCACCTGGGAGAATGCCCTAGAAACTGCAGAACACCAAACTCTGAAGATCGTCTGTaGGGAAAAGGGAAAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: APLYTHLGECPRNCRTPNSEDRL*GKGKSS Trigger: GGAACTTTTCCCTTTTCCCAACAGACGATCTTCAGA...GTTTGGTGTTCTGCAGTTTCTAGGGCATTCTCCCAGGTGGGTGTATAAGGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR GCA 72 bp | GCGTCTTCTGCGCCCTTATACACCCACCTGGGAGAATaGCCTAGAAACTGCAGAACACCAAACTACAAAACT | + |
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Preference number: 3 (lower is better) Translates to: ASSAPLYTHLGE*PRNCRTPNYKT Trigger: AGTTTTGTAGTTTGGTGTTCTGCAGTTTCTAGGGCATTCTCCCAGGTGGGTGTATAAGGGCGCAGAAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGGAGTCCCCGAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAGCACCATCGTGTTTGTaGAACACGTGGATTAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGVPEQNDVAVVFQLAEVAPSCL*NTWINS Trigger: AGAGTTAATCCACGTGTTCAACAAACACGATGGTGC...TACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTCGGGGACTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGGAGTCCCCGAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAACTCTTGTAGGGTTCTaGATACGAACTGAGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGVPEQNDVAVVFQLAEVTLVGF*IRTELF Trigger: GAAAAGCTCAGTTCGTATCAAGAACCCTACAAGAGT...TACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTCGGGGACTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGGAGTCCCCGAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAAGGGATACCGTGCTGTaGAAGTTTACCGAAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LGVPEQNDVAVVFQLAEVRDTVL*KFTEEI Trigger: AATTTCTTCGGTAAACTTCAACAGCACGGTATCCCT...TACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTCGGGGACTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR CCA 72 bp | GTATTCTTCAGGGCACCATCGTGTTTGTTGAACACGTaGATTAACTCTCCTTTGAATCCTTTCAGCACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VFFRAPSCLLNT*INSPLNPFSTP Trigger: TGGAGTGCTGAAAGGATTCAAAGGAGAGTTAATCCACGTGTTCAACAAACACGATGGTGCCCTGAAGAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR CAA 90 bp | CCATCGTGTTTGTTGAACACGTGGATTAACTCTCCTTTGAATCCTTTCAGCACTACTCTTGTAGGGTTCTaGATACGAACTGAGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSCLLNTWINSPLNPFSTTLVGF*IRTELF Trigger: GAAAAGCTCAGTTCGTATCAAGAACCCTACAAGAGT...AGTGCTGAAAGGATTCAAAGGAGAGTTAATCCACGTGTTCAACAAACACGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAGTCTGTATTCTTTGGATTAACTCTCCTTaGAATCCTTTCAGCACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EQNDVAVVFQLAEVVCILWINSP*NPFSTP Trigger: TGGAGTGCTGAAAGGATTCAAAGGAGAGTTAATCCA...AAGAATACAGACTACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR TCA 72 bp | CTTCTTCAAGTACATCACCAATACCAGCAGAAAATATaGACACAGGGATACCGTGCTGTTGAAGTTTACCGA | + |
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Preference number: 3 (lower is better) Translates to: LLQVHHQYQQKI*TQGYRAVEVYR Trigger: TCGGTAAACTTCAACAGCACGGTATCCCTGTGTTCATATTTTCTGCTGGTATTGGTGATGTACTTGAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| 3UTR-3UTR CAA 90 bp | CCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATCCAGAGAGCACTACAAAACTCACTTaGGAAAAGGGAGCCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: PISKLAVVKIRNIIHPESTTKLT*EKGAIF Trigger: AAAGATGGCTCCCTTTTCCAAAGTGAGTTTTGTAGT...GCTCTCTGGATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR TCA 90 bp | GTGACGGAGGTGGGAAGAGGGGCCGTGGTTCACAGGTTCCACACGTCTGAAGATAAGTCTGTTATTATCTaGAGTTTGGCAGCGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTEVGRGAVVHRFHTSEDKSVII*SLAAPP Trigger: AGGAGGCGCTGCCAAACTTCAGATAATAACAGACTT...ATCTTCAGACGTGTGGAACCTGTGAACCACGGCCCCTCTTCCCACCTCCGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR TCA 90 bp | GTGACGGAGGTGGGAAGAGGGGCCGTGGTTCACAGGTTCCACACGTCTGAAGATCACTACTTTGACGTTTaGGTGATAAACTCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VTEVGRGAVVHRFHTSEDHYFDV*VINSSL Trigger: CAGGCTGGAGTTTATCACTCAAACGTCAAAGTAGTG...ATCTTCAGACGTGTGGAACCTGTGAACCACGGCCCCTCTTCCCACCTCCGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR CAA 72 bp | GTGGTTCACAGGTTCCACACGTCTGAAGATCGTCTGTaGGGAAAAGGGAAAAGTTCCAGGAGCAAGACTGTT | + |
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Preference number: 4 (lower is better) Translates to: VVHRFHTSEDRL*GKGKSSRSKTV Trigger: AACAGTCTTGCTCCTGGAACTTTTCCCTTTTCCCAACAGACGATCTTCAGACGTGTGGAACCTGTGAACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CCA 90 bp | AGTATAGTGACGGAGGTGGGAAGAGGGGCCGTGGTTCACAGGTTCCACACGTCTGCTTTTCTGAAATTCTaGCATCATTTTCAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIVTEVGRGAVVHRFHTSAFLKF*HHFQMD Trigger: GTCCATTTGAAAATGATGCCAGAATTTCAGAAAAGC...AGACGTGTGGAACCTGTGAACCACGGCCCCTCTTCCCACCTCCGTCACTATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101367.9 |
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| CDS-3UTR TCA 90 bp | CACAGGTTCCACACGTCTGAAGATCGTCTGTTGGGAAAAGGGAAAAGTTCCAGGGTTCTTGATACGAACTaGGCTTTTCTGAAATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HRFHTSEDRLLGKGKSSRVLDTN*AFLKFW Trigger: CCAGAATTTCAGAAAAGCTCAGTTCGTATCAAGAAC...CCTGGAACTTTTCCCTTTTCCCAACAGACGATCTTCAGACGTGTGGAACCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR TCA 90 bp | GAGCAGAATGATGTTGCTGTTGTCTTTCAGCTGGCTGAAGTAGTCTGTATTCTTCAATCTTCATTTCGATaGTCTTGGTCTTGCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EQNDVAVVFQLAEVVCILQSSFR*SWSCGP Trigger: CGGGCCGCAAGACCAAGATCATCGAAATGAAGATTG...AAGAATACAGACTACTTCAGCCAGCTGAAAGACAACAGCAACATCATTCTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152447.9 |
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| CDS-3UTR GCA 90 bp | CACAGGTTCCACACGTCTGAAGATCGTCTGTTGGGAAAAGGGAAAAGTTCCAGGTACTGCTCCTTTAGCTaGAGTAACTTTCTTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: HRFHTSEDRLLGKGKSSRYCSFS*SNFLRH Trigger: ATGTCGAAGAAAGTTACTGCAGCTAAAGGAGCAGTA...CCTGGAACTTTTCCCTTTTCCCAACAGACGATCTTCAGACGTGTGGAACCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CCA 90 bp | TCTCCATACTCCACCCCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAGAATGTGTTCAACATTaGCTACGCCATCGGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: SPYSTPISKLAVVKIRNIECVQH*LRHRPF Trigger: GAATGGCCGATGGCGTAGCCAATGTTGAACACATTC...TATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGGGGTGGAGTATGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR TCA 90 bp | TTTCTTTTTCTGGTTTATTCTCAGTGCTTCACACAGAGTATTTGCAATGTTAGCAGTCCCCGAGCAGAATaGTGTTGCTGTTGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FLFLVYSQCFTQSICNVSSPRAE*CCCCLS Trigger: TGAAAGACAACAGCAACATCATTCTGCTCGGGGACT...GCTAACATTGCAAATACTCTGTGTGAAGCACTGAGAATAAACCAGAAAAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR TCA 90 bp | CAAATAAAACAATTTCAGAAGATGATGTCTCCATACTCCACCCCAATTTCAAAGAGTCCCCGAGCAGAATaGTGTTGCTGTTGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: QIKQFQKMMSPYSTPISKSPRAE*CCCCLS Trigger: TGAAAGACAACAGCAACATCATTCTGCTCGGGGACT...CTTTGAAATTGGGGTGGAGTATGGAGACATCATCTTCTGAAATTGTTTTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATCCAGAGAGCGCAAACCGTGAGATTTaGTATACCACTCTACCATGT | + |
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Preference number: 4 (lower is better) Translates to: PISKLAVVKIRNIIHPESANREI*YTTLPC Trigger: ACATGGTAGAGTGGTATACCAAATCTCACGGTTTGC...GCTCTCTGGATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CCA 90 bp | CAAATAAAACAATTTCAGAAGATGATGTCTCCATACTCCACCCCAATTTCAAAGGAATGTGTTCAACATTaGCTACGCCATCGGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: QIKQFQKMMSPYSTPISKECVQH*LRHRPF Trigger: GAATGGCCGATGGCGTAGCCAATGTTGAACACATTC...CTTTGAAATTGGGGTGGAGTATGGAGACATCATCTTCTGAAATTGTTTTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| 3UTR CAA 72 bp | CCATCGTGTTTGTTGAACACGTGGATTAACTCTCCTTaGAATCCTTTCAGCACTCCATTTTCATCAAAATCC | + |
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Preference number: 4 (lower is better) Translates to: PSCLLNTWINSP*NPFSTPFSSKS Trigger: GGATTTTGATGAAAATGGAGTGCTGAAAGGATTCAAAGGAGAGTTAATCCACGTGTTCAACAAACACGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135558.8 ENSMUST00000152447.9 |
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| CDS-3UTR TCA 90 bp | TTTCTTTTTCTGGTTTATTCTCAGTGCTTCACACAGAGTATTTGCAATGTTAGCAAGTCTGTTATTATCTaGAGTTTGGCAGCGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FLFLVYSQCFTQSICNVSKSVII*SLAAPP Trigger: AGGAGGCGCTGCCAAACTTCAGATAATAACAGACTT...GCTAACATTGCAAATACTCTGTGTGAAGCACTGAGAATAAACCAGAAAAAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CCA 90 bp | TACTCCACCCCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATGCAAACCGTGAGATTTaGTATACCACTCTACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YSTPISKLAVVKIRNIIHANREI*YTTLPC Trigger: ACATGGTAGAGTGGTATACCAAATCTCACGGTTTGC...ATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGGGGTGGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR TCA 90 bp | CAAATAAAACAATTTCAGAAGATGATGTCTCCATACTCCACCCCAATTTCAAAGGTTCTTGATACGAACTaGGCTTTTCTGAAATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QIKQFQKMMSPYSTPISKVLDTN*AFLKFW Trigger: CCAGAATTTCAGAAAAGCTCAGTTCGTATCAAGAAC...CTTTGAAATTGGGGTGGAGTATGGAGACATCATCTTCTGAAATTGTTTTATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR GCA 90 bp | TTTCTTTTTCTGGTTTATTCTCAGTGCTTCACACAGAGTATTTGCAATGTTAGCTACTGCTCCTTTAGCTaGAGTAACTTTCTTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: FLFLVYSQCFTQSICNVSYCSFS*SNFLRH Trigger: ATGTCGAAGAAAGTTACTGCAGCTAAAGGAGCAGTA...GCTAACATTGCAAATACTCTGTGTGAAGCACTGAGAATAAACCAGAAAAAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | GCTGAGTATAGTGACGGAGGTGGGAAGAGGGGCCGTGGTTCACAGGTTCCACACAGGGATACCGTGCTGTaGAAGTTTACCGAAGAAATT | + |
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Preference number: 5 (lower is better) Translates to: AEYSDGGGKRGRGSQVPHRDTVL*KFTEEI Trigger: AATTTCTTCGGTAAACTTCAACAGCACGGTATCCCT...GTGTGGAACCTGTGAACCACGGCCCCTCTTCCCACCTCCGTCACTATACTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | GTGACGGAGGTGGGAAGAGGGGCCGTGGTTCACAGGTTCCACACGTCTGAAGATTGGATTAACTCTCCTTaGAATCCTTTCAGCACTCCA | + |
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Preference number: 5 (lower is better) Translates to: VTEVGRGAVVHRFHTSEDWINSP*NPFSTP Trigger: TGGAGTGCTGAAAGGATTCAAAGGAGAGTTAATCCA...ATCTTCAGACGTGTGGAACCTGTGAACCACGGCCCCTCTTCCCACCTCCGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | AGTATAGTGACGGAGGTGGGAAGAGGGGCCGTGGTTCACAGGTTCCACACGTCTGCACCATCGTGTTTGTaGAACACGTGGATTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: SIVTEVGRGAVVHRFHTSAPSCL*NTWINS Trigger: AGAGTTAATCCACGTGTTCAACAAACACGATGGTGC...AGACGTGTGGAACCTGTGAACCACGGCCCCTCTTCCCACCTCCGTCACTATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | GCGCCCTTATACACCCACCTGGGAGAATGCCCTAGAAACTGCAGAACACCAAACGCACCATCGTGTTTGTaGAACACGTGGATTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: APLYTHLGECPRNCRTPNAPSCL*NTWINS Trigger: AGAGTTAATCCACGTGTTCAACAAACACGATGGTGC...GTTTGGTGTTCTGCAGTTTCTAGGGCATTCTCCCAGGTGGGTGTATAAGGGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | GCGCCCTTATACACCCACCTGGGAGAATGCCCTAGAAACTGCAGAACACCAAACACTCTTGTAGGGTTCTaGATACGAACTGAGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: APLYTHLGECPRNCRTPNTLVGF*IRTELF Trigger: GAAAAGCTCAGTTCGTATCAAGAACCCTACAAGAGT...GTTTGGTGTTCTGCAGTTTCTAGGGCATTCTCCCAGGTGGGTGTATAAGGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | TCTCCATACTCCACCCCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAAGGGATACCGTGCTGTaGAAGTTTACCGAAGAAATT | + |
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Preference number: 5 (lower is better) Translates to: SPYSTPISKLAVVKIRNIRDTVL*KFTEEI Trigger: AATTTCTTCGGTAAACTTCAACAGCACGGTATCCCT...TATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGGGGTGGAGTATGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | CCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATCCAGAGAGCAGAATGATGTTGCTGTaGTCTTTCAGCTGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: PISKLAVVKIRNIIHPESRMMLL*SFSWLK Trigger: CTTCAGCCAGCTGAAAGACAACAGCAACATCATTCT...GCTCTCTGGATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | CCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATCCAGAGAGCACTCTTGTAGGGTTCTaGATACGAACTGAGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: PISKLAVVKIRNIIHPESTLVGF*IRTELF Trigger: GAAAAGCTCAGTTCGTATCAAGAACCCTACAAGAGT...GCTCTCTGGATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS-3UTR CAA 90 bp | TACTCCACCCCAATTTCAAAGCTAGCAGTGGTTAAAATCAGGAACATAATACATAGAATGATGTTGCTGTaGTCTTTCAGCTGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: YSTPISKLAVVKIRNIIHRMMLL*SFSWLK Trigger: CTTCAGCCAGCTGAAAGACAACAGCAACATCATTCT...ATGTATTATGTTCCTGATTTTAACCACTGCTAGCTTTGAAATTGGGGTGGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031793.8 ENSMUST00000101367.9 |
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| CDS TCA 72 bp | TTAGAGTCATGTCAAAGTCTGTTATTATCATTTCGATaGTCTTGGTCTTGCGGCCCGTTTTTCTCTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LESCQSLLLSFR*SWSCGPFFSSR Trigger: CCTTGAAGAGAAAAACGGGCCGCAAGACCAAGATCATCGAAATGATAATAACAGACTTTGACATGACTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205087.2 |
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