Pregenerated sensors for NT5C1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054958Ensembl transcript IDs: ENSMUST00000068262.6
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGTACCGCGGCGGTCTCTaGCCCTGGCCCGGGTTCGCG | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARYRGGL*PWPGFA Trigger: CGCGAACCCGGGCCAGGGGCAGAGACCGCCGCGGTA...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGAGCTGCGCAGGGTCTTaGGGGCCCGGGCTCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARSCAGS*GPGLRN Trigger: GTTCCGGAGCCCGGGCCCTCAAGACCCTGCGCAGCT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR GCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCATGGGCGGCCACCGTaGCCATCTCCTGAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARHGRPP*PSPELQ Trigger: CTGGAGCTCAGGAGATGGGCACGGTGGCCGCCCATG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGACCGTGCCCATCTCCTaGGCTCCAGCCACGTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARTVPIS*APATWN Trigger: GTTCCACGTGGCTGGAGCTCAGGAGATGGGCACGGT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR GCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGGGCTCCGGAACTGGCTaGACTTCGCGCGGTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARGSGTG*TSRGHQ Trigger: TTGGTGACCGCGCGAAGTGCAGCCAGTTCCGGAGCC...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCATCCCTGCTGGGGCTaGAGATGGTGGCAGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARHPCWG*RWWQLQ Trigger: TTGCAGCTGCCACCATCTTCAGCCCCAGCAGGGATG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCCAGCCCATGGGCCTTaGCGATGCGCTCTGACTCAT | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARPAHGP*RCALTH Trigger: ATGAGTCAGAGCGCATCGTCAAGGCCCATGGGCTGG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGAGGACACCGCGATGGTaGCCGCATTCTGAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARRTPRW*PHSEAL Trigger: CAAAGCCTCAGAATGCGGTCACCATCGCGGTGTCCT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGAAGGCCACTCGAAGCTaGCTCTGGGACACAACCACA | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARKATRS*LWDTTT Trigger: TGTGGTTGTGTCCCAGAGTCAGCTTCGAGTGGCCTT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR GCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGAAGGGCTCATTCTCGTaGTCCAGCTGGTATCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARKGSFS*SSWYRT Trigger: CGTGCGATACCAGCTGGAGCACGAGAATGAGCCCTT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR GCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGGAAGATGGTGGCAGCTaGAATCCCCTCATCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGAREDGGS*NPLIDG Trigger: GCCATCGATGAGGGGATTGCAGCTGCCACCATCTTC...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR GCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGATCGGAGAAGAGTACTaGGTCCCCATCGAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARIGEEY*VPIEGH Trigger: GTGGCCTTCGATGGGGACGCAGTACTCTTCTCCGAT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR GCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCGGTCACCAAATACGTaGGAATCGGGCACTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARRSPNT*ESGTPD Trigger: GTCTGGAGTGCCCGATTCGCACGTATTTGGTGACCG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGTTCTCGTGCTCCAGCTaGTATCGCACGTACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARFSCSS*YRTYSS Trigger: CGAGGAGTACGTGCGATACCAGCTGGAGCACGAGAA...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGAATCTGTCCAGCCCATaGGCCTTGACGATGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARNLSSP*ALTMRS Trigger: AGAGCGCATCGTCAAGGCCCATGGGCTGGACAGATT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCTTGACGATGCGCTCTaGCTCATCGGAGAAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARLDDAL*LIGEEY Trigger: GTACTCTTCTCCGATGAGTCAGAGCGCATCGTCAAG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR TCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGTTTGTCTGCATCGGCTaGCAAGTAGAGGTTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARFVCIG*QVEVGV Trigger: CACACCAACCTCTACTTGTCAGCCGATGCAGACAAA...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCAATCCCCTCATCGATaGCTTCTCGCACTTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARQSPHR*LLALCL Trigger: CAGACAAAGTGCGAGAAGCCATCGATGAGGGGATTG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCCAGACGCAGGCCCTTaGAGTAGAATTTCTTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARPDAGP*SRISFA Trigger: TGCAAAAGAAATTCTACTCCAAGGGCCTGCGTCTGG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCGCATTCTGAGGCTTTaGCGATTTGGGTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARRILRL*RFGFLL Trigger: AAGAAGAAACCCAAATCGCCAAAGCCTCAGAATGCG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CCA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGATTTGGGTTTCTTCTTaGACGAGAGGTTGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKVHQMKFRKCDRGPGARIWVSS*TRGCHR Trigger: TCTATGACAACCTCTCGTCCAAGAAGAAACCCAAAT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS GCA 90 bp | ATAGAAAGTCTTGGCTTCCTCCCAGCGCGGTACCGCGGCGGTCTCTaGCCCTGGCCCGGGTTCGCGGGCCTCCCGGGGCTGCCCTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: IESLGFLPARYRGGL*PWPGFAGLPGLPWF Trigger: GAACCAGGGCAGCCCCGGGAGGCCCGCGAACCCGGGCCAGGGGCAGAGACCGCCGCGGTACCGCGCTGGGAGGAAGCCAAGACTTTCTAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS GCA 90 bp | GCCCCAGCTGCGCAGGGTCTTGAGGGCCCGGGCTCCGGAACTGGCTaGACTTCGCGCGGTCACCAAATACGTGCGAATCGGGCACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: APAAQGLEGPGSGTG*TSRGHQIRANRALQ Trigger: CTGGAGTGCCCGATTCGCACGTATTTGGTGACCGCGCGAAGTGCAGCCAGTTCCGGAGCCCGGGCCCTCAAGACCCTGCGCAGCTGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS GCA 90 bp | TTCACAAAGGGGAAGGCAGGCCCGGGGCTGAAGGGCTCATTCTCGTaGTCCAGCTGGTATCGCACGTACTCCTCGACACCCTGCTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: FTKGKAGPGLKGSFS*SSWYRTYSSTPCSV Trigger: CACGGAGCAGGGTGTCGAGGAGTACGTGCGATACCAGCTGGAGCACGAGAATGAGCCCTTCAGCCCCGGGCCTGCCTTCCCCTTTGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS GCA 90 bp | CCCGGGCTCCGGAACTGGCTGCACTTCGCGCGGTCACCAAATACGTaGGAATCGGGCACTCCAGACGCAGGCCCTTGGAGTAGAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: PGLRNWLHFARSPNT*ESGTPDAGPWSRIS Trigger: AGAAATTCTACTCCAAGGGCCTGCGTCTGGAGTGCCCGATTCGCACGTATTTGGTGACCGCGCGAAGTGCAGCCAGTTCCGGAGCCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CCA 90 bp | GCGATTTGGGTTTCTTCTTGGACGAGAGGTTGTCATAGAAAGTCTTaGCTTCCTCCCAGCGCGGTACCGCGGCGGTCTCTGCCCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AIWVSSWTRGCHRKS*LPPSAVPRRSLPLA Trigger: GGCCAGGGGCAGAGACCGCCGCGGTACCGCGCTGGGAGGAAGCCAAGACTTTCTATGACAACCTCTCGTCCAAGAAGAAACCCAAATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CAA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCAGCTGCGCAGGGTCTaGAGGGCCCGGGCTCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: RKVHQMKFRKCDRGPGARQLRRV*RARAPE Trigger: TTCCGGAGCCCGGGCCCTCAAGACCCTGCGCAGCTG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS TCA 90 bp | GTTCCTCATCCATTCGGAACAAGGCTCTGGAGGACACCGCGATGGTaGCCGCATTCTGAGGCTTTGGCGATTTGGGTTTCTTCTTGGACG | + |
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Preference number: 5 (lower is better) Translates to: VPHPFGTRLWRTPRW*PHSEALAIWVSSWT Trigger: CGTCCAAGAAGAAACCCAAATCGCCAAAGCCTCAGAATGCGGTCACCATCGCGGTGTCCTCCAGAGCCTTGTTCCGAATGGATGAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS TCA 90 bp | TGCAATCCCCTCATCGATGGCTTCTCGCACTTTGTCTGCATCGGCTaGCAAGTAGAGGTTGGTGTGGTAGGCCTTGAGGTAGCAGATGGG | + |
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Preference number: 5 (lower is better) Translates to: CNPLIDGFSHFVCIG*QVEVGVVGLEVADG Trigger: CCCATCTGCTACCTCAAGGCCTACCACACCAACCTCTACTTGTCAGCCGATGCAGACAAAGTGCGAGAAGCCATCGATGAGGGGATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CAA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGTCCAGCCCATGGGCCTaGACGATGCGCTCTGACTCA | + |
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Preference number: 5 (lower is better) Translates to: RKVHQMKFRKCDRGPGARSSPWA*TMRSDS Trigger: TGAGTCAGAGCGCATCGTCAAGGCCCATGGGCTGGA...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CAA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGCCCTGCGCCAAAGGTTaGTTCTCGTGGGCCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: RKVHQMKFRKCDRGPGARPCAKG*FSWAFS Trigger: TGAGAAGGCCCACGAGAACAAACCTTTGGCGCAGGG...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CAA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGATGGCTTCTCGCACTTaGTCTGCATCGGCTGACAAG | + |
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Preference number: 5 (lower is better) Translates to: RKVHQMKFRKCDRGPGARMASRT*SASADK Trigger: CTTGTCAGCCGATGCAGACAAAGTGCGAGAAGCCAT...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS-3UTR CAA 90 bp | AGAAAAGTTCACCAGATGAAGTTCAGAAAGTGTGACAGGGGGCCTGGAGCAAGGGGAGTAGAATTTCTTTaGCAGTCTACCCAGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RKVHQMKFRKCDRGPGARGVEFL*QSTQCF Trigger: GAAGCACTGGGTAGACTGCAAAAGAAATTCTACTCC...CCTTGCTCCAGGCCCCCTGTCACACTTTCTGAACTTCATCTGGTGAACTTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CCA 72 bp | TTCCTCCCAGCGCGGTACCGCGGCGGTCTCTGCCCCTaGCCCGGGTTCGCGGGCCTCCCGGGGCTGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FLPARYRGGLCP*PGFAGLPGLPW Trigger: CCAGGGCAGCCCCGGGAGGCCCGCGAACCCGGGCCAGGGGCAGAGACCGCCGCGGTACCGCGCTGGGAGGAA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS GCA 72 bp | CTTGGCTTCCTCCCAGCGCGGTACCGCGGCGGTCTCTaGCCCTGGCCCGGGTTCGCGGGCCTCCCGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGFLPARYRGGL*PWPGFAGLPGL Trigger: CAGCCCCGGGAGGCCCGCGAACCCGGGCCAGGGGCAGAGACCGCCGCGGTACCGCGCTGGGAGGAAGCCAAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS GCA 72 bp | GCGCAGGGTCTTGAGGGCCCGGGCTCCGGAACTGGCTaGACTTCGCGCGGTCACCAAATACGTGCGAATCGG | + |
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Preference number: 6 (lower is better) Translates to: AQGLEGPGSGTG*TSRGHQIRANR Trigger: CCGATTCGCACGTATTTGGTGACCGCGCGAAGTGCAGCCAGTTCCGGAGCCCGGGCCCTCAAGACCCTGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CCA 72 bp | GGCCCGGGGCTGAAGGGCTCATTCTCGTGCTCCAGCTaGTATCGCACGTACTCCTCGACACCCTGCTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: GPGLKGSFSCSS*YRTYSSTPCSV Trigger: CACGGAGCAGGGTGTCGAGGAGTACGTGCGATACCAGCTGGAGCACGAGAATGAGCCCTTCAGCCCCGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS GCA 72 bp | CGGAACTGGCTGCACTTCGCGCGGTCACCAAATACGTaGGAATCGGGCACTCCAGACGCAGGCCCTTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RNWLHFARSPNT*ESGTPDAGPWS Trigger: ACTCCAAGGGCCTGCGTCTGGAGTGCCCGATTCGCACGTATTTGGTGACCGCGCGAAGTGCAGCCAGTTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS TCA 72 bp | GAATCTGTCCAGCCCATGGGCCTTGACGATGCGCTCTaGCTCATCGGAGAAGAGTACTGCGTCCCCATCGAA | + |
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Preference number: 6 (lower is better) Translates to: ESVQPMGLDDAL*LIGEEYCVPIE Trigger: TTCGATGGGGACGCAGTACTCTTCTCCGATGAGTCAGAGCGCATCGTCAAGGCCCATGGGCTGGACAGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS TCA 72 bp | AAGGCTCTGGAGGACACCGCGATGGTGACCGCATTCTaGGGCTTTGGCGATTTGGGTTTCTTCTTGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: KALEDTAMVTAF*GFGDLGFFLDE Trigger: CTCGTCCAAGAAGAAACCCAAATCGCCAAAGCCTCAGAATGCGGTCACCATCGCGGTGTCCTCCAGAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS TCA 72 bp | CCATTCGGAACAAGGCTCTGGAGGACACCGCGATGGTaGCCGCATTCTGAGGCTTTGGCGATTTGGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PFGTRLWRTPRW*PHSEALAIWVS Trigger: AGAAACCCAAATCGCCAAAGCCTCAGAATGCGGTCACCATCGCGGTGTCCTCCAGAGCCTTGTTCCGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CAA 72 bp | TCCAGGAAGCCCTTTAGGGGGCCCTGCGCCAAAGGTTaGTTCTCGTGGGCCTTCTCATGCTCAAAGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: SRKPFRGPCAKG*FSWAFSCSKNL Trigger: CAGATTCTTTGAGCATGAGAAGGCCCACGAGAACAAACCTTTGGCGCAGGGCCCCCTAAAGGGCTTCCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CAA 90 bp | ATGTCAAAGATATCTTCGCTATCAGGGTACAACTCCCGAAGTCGCTaGTTCACAGCCTCCAGGGCCTTCACAAAGGGGAAGGCAGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: MSKISSLSGYNSRSR*FTASRAFTKGKAGP Trigger: CGGGCCTGCCTTCCCCTTTGTGAAGGCCCTGGAGGCTGTGAACAAGCGACTTCGGGAGTTGTACCCTGATAGCGAAGATATCTTTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CCA 72 bp | AGATGTGTGGACGGATCTTCTCAAGAAGGGGACCCTTaGGTGCTCCAGCTAGGAATAAGGCCTCATCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: RCVDGSSQEGDP*VLQLGIRPHPS Trigger: AGACGGATGAGGCCTTATTCCTAGCTGGAGCACCCAAGGGTCCCCTTCTTGAGAAGATCCGTCCACACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CAA 72 bp | AAGATGTGTGGACGGATCTTCTCAAGAAGGGGACCCTaGGGTGCTCCAGCTAGGAATAAGGCCTCATCCGTC | + |
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Preference number: 6 (lower is better) Translates to: KMCGRIFSRRGP*GAPARNKASSV Trigger: GACGGATGAGGCCTTATTCCTAGCTGGAGCACCCAAGGGTCCCCTTCTTGAGAAGATCCGTCCACACATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS TCA 72 bp | CTCATCGATGGCTTCTCGCACTTTGTCTGCATCGGCTaGCAAGTAGAGGTTGGTGTGGTAGGCCTTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LIDGFSHFVCIG*QVEVGVVGLEV Trigger: TACCTCAAGGCCTACCACACCAACCTCTACTTGTCAGCCGATGCAGACAAAGTGCGAGAAGCCATCGATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS TCA 72 bp | TCTCATGCTCAAAGAATCTGTCCAGCCCATGGGCCTTaGCGATGCGCTCTGACTCATCGGAGAAGAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: SHAQRICPAHGP*RCALTHRRRVL Trigger: CAGTACTCTTCTCCGATGAGTCAGAGCGCATCGTCAAGGCCCATGGGCTGGACAGATTCTTTGAGCATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CAA 72 bp | ATATCTTCGCTATCAGGGTACAACTCCCGAAGTCGCTaGTTCACAGCCTCCAGGGCCTTCACAAAGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ISSLSGYNSRSR*FTASRAFTKGK Trigger: CTTCCCCTTTGTGAAGGCCCTGGAGGCTGTGAACAAGCGACTTCGGGAGTTGTACCCTGATAGCGAAGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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| CDS CCA 72 bp | AATACGTGCGAATCGGGCACTCCAGACGCAGGCCCTTaGAGTAGAATTTCTTTTGCAGTCTACCCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NTCESGTPDAGP*SRISFAVYPVL Trigger: AAGCACTGGGTAGACTGCAAAAGAAATTCTACTCCAAGGGCCTGCGTCTGGAGTGCCCGATTCGCACGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068262.6 |
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