Pregenerated sensors for NT5C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020736Ensembl transcript IDs: ENSMUST00000021082.7, ENSMUST00000106530.8
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCTCCTGGGAGGAGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTaGTTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTGTCCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: GLLGGAGKQSVQVAP*LKKVTCPGRVLSTS Trigger: TGAGGTGGACAGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCTCCTCCCAGGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCGTTCAAGTGGCTCCCTaGTTAAAGAAAGTCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRKAVCSSGSLIKESHLSVQVAP*LKKVTC Trigger: ACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAAC...GGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| 3UTR TCA 72 bp | GGAGGAGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTaGTTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: GGAGKQSVQVAP*LKKVTCPGRVL Trigger: CAGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGGGTCCTGTCCACCTCAGGGTCCTTCACAGGCTGGCTCGCTTGCTCTCCGCTCCACAAACTCTaGCCCCAGGTTCTGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGRVLSTSGSFTGWLACSPLHKL*PQVLLH Trigger: GTGGAGCAGAACCTGGGGCCAGAGTTTGTGGAGCGG...AGAGCAAGCGAGCCAGCCTGTGAAGGACCCTGAGGTGGACAGGACCCTGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | TGTAGGCCTCCTGGGAGGAGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTGATTGGCAGGGCCAGGTGCTaGTTGTGGCAGCAGGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CRPPGRSRKAVCSSGSLIGRARC*LWQQVN Trigger: GTTCACCTGCTGCCACAATCAGCACCTGGCCCTGCC...AATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCTCCTCCCAGGAGGCCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR GCA 90 bp | TGTAGGCCTCCTGGGAGGAGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTGATTTGTTCCAGCGGCACGTaGGGTTCCTCGGGAAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: CRPPGRSRKAVCSSGSLICSSGT*GSSGKR Trigger: CCGCTTTCCCGAGGAACCGCACGTGCCGCTGGAACA...AATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCTCCTCCCAGGAGGCCTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR GCA 90 bp | AGGCCTCCTGGGAGGAGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTGATTAAATGTTCCAGCGGCACGTaGGGTTCCTCGGGAAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: RPPGRSRKAVCSSGSLIKCSSGT*GSSGKR Trigger: CCGCTTTCCCGAGGAACCGCACGTGCCGCTGGAACA...TTTAATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCTCCTCCCAGGAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CCA 90 bp | AGTCTCCTTCTTTCCCGTGTAGGCCTCCTGGGAGGAGCCGGAAAGCAGTCTGTTCCGCTCCACAAACTCTaGCCCCAGGTTCTGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLLLSRVGLLGGAGKQSVPLHKL*PQVLLH Trigger: GTGGAGCAGAACCTGGGGCCAGAGTTTGTGGAGCGG...AACAGACTGCTTTCCGGCTCCTCCCAGGAGGCCTACACGGGAAAGAAGGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | TCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTGTCCACGGCAGGGCCAGGTGCTaGTTGTGGCAGCAGGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SSGSLIKESHLSRQGPVHGRARC*LWQQVN Trigger: GTTCACCTGCTGCCACAATCAGCACCTGGCCCTGCC...GTGGACAGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | TCTCCTTCTTTCCCGTGTAGGCCTCCTGGGAGGAGCCGGAAAGCAGTCTGTTCAGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSFPCRPPGRSRKAVCSDCGSR*TRCAPS Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...TGAACAGACTGCTTTCCGGCTCCTCCCAGGAGGCCTACACGGGAAAGAAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | TTGTGTGCTAGTCTCCTTCTTTCCCGTGTAGGCCTCCTGGGAGGAGCCGGAAAGGATTGTGGCAGCAGGTaGACAAGATGTGCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LCASLLLSRVGLLGGAGKDCGSR*TRCAPS Trigger: GCTGGGAGCACATCTTGTTCACCTGCTGCCACAATC...CTTTCCGGCTCCTCCCAGGAGGCCTACACGGGAAAGAAGGAGACTAGCACACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | TCTCCTTCTTTCCCGTGTAGGCCTCCTGGGAGGAGCCGGAAAGCAGTCTGTTCACTCGCTTGCTCTCAATaGTCCCCCTCCAGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SPSFPCRPPGRSRKAVCSLACSQ*SPSSCH Trigger: GTGACAACTGGAGGGGGATCATTGAGAGCAAGCGAG...TGAACAGACTGCTTTCCGGCTCCTCCCAGGAGGCCTACACGGGAAAGAAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021082.7 |
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| CDS-3UTR TCA 90 bp | GGCAGGGTCCTGTCCACCTCAGGGTCCTTCACAGGCTGGCTCGCTTGCTCTCAAGACAGCGTGCGCTCTTaGATGTTGTCTTTGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: GRVLSTSGSFTGWLACSQDSVRS*MLSLSS Trigger: TGATGACAAAGACAACATTCAAGAGCGCACGCTGTC...TTGAGAGCAAGCGAGCCAGCCTGTGAAGGACCCTGAGGTGGACAGGACCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106530.8 |
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| CDS-3UTR CCA 90 bp | TGTGCTAGTCTCCTTCTTTCCCGTGTAGGCCTCCTGGGAGGAGCCGGAAAGCAGGTCGTACTTCAGCAGTaGGGTGGTGCAGATGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: CASLLLSRVGLLGGAGKQVVLQQ*GGADED Trigger: GTCTTCATCTGCACCACCCCACTGCTGAAGTACGAC...CTGCTTTCCGGCTCCTCCCAGGAGGCCTACACGGGAAAGAAGGAGACTAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CCA 90 bp | TGTCCACCTCAGGGTCCTTCACAGGCTGGCTCGCTTGCTCTCAATGATCCCCCTGTCGTACTTCAGCAGTaGGGTGGTGCAGATGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: CPPQGPSQAGSLALNDPPVVLQQ*GGADED Trigger: GTCTTCATCTGCACCACCCCACTGCTGAAGTACGAC...AGGGGGATCATTGAGAGCAAGCGAGCCAGCCTGTGAAGGACCCTGAGGTGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106530.8 |
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| CDS-3UTR GCA 90 bp | GTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTTCTGGCCCCAGGTTCTaGTCCACCCAGCGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: VCSSGSLIKESHLSRQGPSGPRF*STQRYF Trigger: GAAGTACCGCTGGGTGGAGCAGAACCTGGGGCCAGA...AGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR GCA 90 bp | AGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCTCTGGCCCCAGGTTCTaGTCCACCCAGCGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: SRKAVCSSGSLIKESHLSSGPRF*STQRYF Trigger: GAAGTACCGCTGGGTGGAGCAGAACCTGGGGCCAGA...GGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CCA 90 bp | TCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTGTCCACTTCTCGCCCACACAGTaGTCGTACTTCAGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSGSLIKESHLSRQGPVHFSPTQ*SYFSSG Trigger: CCCACTGCTGAAGTACGACCACTGTGTGGGCGAGAA...GTGGACAGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | TGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTGTCGTGGGGTGGTGCAGATaGAGACCTCGGTGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: CSSGSLIKESHLSRQGPVVGWCR*RPRCLS Trigger: TGAAAGACACCGAGGTCTTCATCTGCACCACCCCAC...GACAGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | GCAGTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGGGTGTGGGGTGGTGCAGATaGAGACCTCGGTGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: AVCSSGSLIKESHLSRQGVGWCR*RPRCLS Trigger: TGAAAGACACCGAGGTCTTCATCTGCACCACCCCAC...ACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CCA 90 bp | GTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTGAGATTCATACACACTaGCCACTTTTTCCGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VCSSGSLIKESHLSRQGPEIHTH*PLFPPG Trigger: ACCTGGCGGAAAAAGTGGCCAGTGTGTATGAATCTC...AGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CCA 90 bp | AGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCGAGATTCATACACACTaGCCACTTTTTCCGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SRKAVCSSGSLIKESHLSEIHTH*PLFPPG Trigger: ACCTGGCGGAAAAAGTGGCCAGTGTGTATGAATCTC...GGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTCCACTGTATTTGTGTGCTAGTCTCCTTCTTTCCCGTGTAGGCCTCCTGGTCTCCTCTAGGCCTTaGATGTTGTCTTTGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: FSPLYLCASLLLSRVGLLVSSRP*MLSLSS Trigger: TGATGACAAAGACAACATTCAAGGCCTAGAGGAGAC...CAGGAGGCCTACACGGGAAAGAAGGAGACTAGCACACAAATACAGTGGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021082.7 |
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| CDS GCA 90 bp | TACTGCTCGTTGGCGAGGAAGCCCCGGCGCTGTTCCAGCGGCACGTaGGGTTCCTCGGGAAAGCGGCGGCGAAAACCCTGCAGGAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: YCSLARKPRRCSSGT*GSSGKRRRKPCRRP Trigger: CGGCCTCCTGCAGGGTTTTCGCCGCCGCTTTCCCGAGGAACCGCACGTGCCGCTGGAACAGCGCCGGGGCTTCCTCGCCAACGAGCAGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CAA 90 bp | GCTAGTCTCCTTCTTTCCCGTGTAGGCCTCCTGGGAGGAGCCGGAAAGCAGTCTAGATGTGCTCCCAGCTaGGGGTCTCCTCTAGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: ASLLLSRVGLLGGAGKQSRCAPS*GSPLGL Trigger: AAGGCCTAGAGGAGACCCCAAGCTGGGAGCACATCT...AGACTGCTTTCCGGCTCCTCCCAGGAGGCCTACACGGGAAAGAAGGAGACTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021082.7 |
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| CDS-3UTR CAA 90 bp | GGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGGGTCCTGTCCACCTCAGGCCCATGACCACCGTCTaGTCCCTAGTCAAGATAATC | + |
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Preference number: 5 (lower is better) Translates to: GSLIKESHLSRQGPVHLRPMTTV*SLVKII Trigger: GATTATCTTGACTAGGGACAAGACGGTGGTCATGGG...CCTGAGGTGGACAGGACCCTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS-3UTR CAA 90 bp | AAAGCAGTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCAGGCAGAGATGTGCTCCCAGCTaGGGGTCTCCTCTAGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: KAVCSSGSLIKESHLSRQRCAPS*GSPLGL Trigger: CAGGCCTAGAGGAGACCCCAAGCTGGGAGCACATCT...CTGCCTGGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106530.8 |
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| CDS-3UTR CAA 90 bp | AGCCGGAAAGCAGTCTGTTCAAGTGGCTCCCTGATTAAAGAAAGTCACCTGTCCCCCATGACCACCGTCTaGTCCCTAGTCAAGATAATC | + |
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Preference number: 5 (lower is better) Translates to: SRKAVCSSGSLIKESHLSPMTTV*SLVKII Trigger: GATTATCTTGACTAGGGACAAGACGGTGGTCATGGG...GGACAGGTGACTTTCTTTAATCAGGGAGCCACTTGAACAGACTGCTTTCCGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS CCA 72 bp | CCGCCAGGTCCGGCCTCAGAGCTCCGTACTGCTCGTTaGCGAGGAAGCCCCGGCGCTGTTCCAGCGGCACGT | + |
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Preference number: 6 (lower is better) Translates to: PPGPASELRTAR*RGSPGAVPAAR Trigger: ACGTGCCGCTGGAACAGCGCCGGGGCTTCCTCGCCAACGAGCAGTACGGAGCTCTGAGGCCGGACCTGGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS GCA 72 bp | TTGGCGAGGAAGCCCCGGCGCTGTTCCAGCGGCACGTaGGGTTCCTCGGGAAAGCGGCGGCGAAAACCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LARKPRRCSSGT*GSSGKRRRKPC Trigger: GCAGGGTTTTCGCCGCCGCTTTCCCGAGGAACCGCACGTGCCGCTGGAACAGCGCCGGGGCTTCCTCGCCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS CCA 72 bp | TTCTGCTCCACCCAGCGGTACTTCTCGCCCACACAGTaGTCGTACTTCAGCAGTGGGGTGGTGCAGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: FCSTQRYFSPTQ*SYFSSGVVQMK Trigger: CTTCATCTGCACCACCCCACTGCTGAAGTACGACCACTGTGTGGGCGAGAAGTACCGCTGGGTGGAGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021082.7 ENSMUST00000106530.8 |
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| CDS TCA 72 bp | CCTCTAGGCCTGGGCAGTAAAGACAGCGTGCGCTCTTaGATGTTGTCTTTGTCATCAATGAGCAGGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PLGLGSKDSVRS*MLSLSSMSRSP Trigger: GGGAGACCTGCTCATTGATGACAAAGACAACATTCAAGAGCGCACGCTGTCTTTACTGCCCAGGCCTAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106530.8 |
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