Pregenerated sensors for NSUN7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029206Ensembl transcript IDs: ENSMUST00000031109.7, ENSMUST00000201100.4, ENSMUST00000202994.4
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGGAGCAGTAGGATGCTTAAGGAAAAAGCTGGCCTCAGTTGGCTTTaGAGAGGTTTCAGCTACAGTAACTGCCTAGCTAAGGAGTGCCCG | + |
Preference number: 1 (lower is better) Translates to: RSSRMLKEKAGLSWL*RGFSYSNCLAKECP Trigger: CGGGCACTCCTTAGCTAGGCAGTTACTGTAGCTGAAACCTCTCCAAAGCCAACTGAGGCCAGCTTTTTCCTTAAGCATCCTACTGCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR CCA 90 bp | TCTCTCAGGAGCAGTAGGATGCTTAAGGAAAAAGCTGGCCTCAGTTaGCTTTGGAGAGGTTTCAGCTACAGTAACTGCCTAGCTAAGGAG | + |
Preference number: 1 (lower is better) Translates to: SLRSSRMLKEKAGLS*LWRGFSYSNCLAKE Trigger: CTCCTTAGCTAGGCAGTTACTGTAGCTGAAACCTCTCCAAAGCCAACTGAGGCCAGCTTTTTCCTTAAGCATCCTACTGCTCCTGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR-3UTR TCA 90 bp | TTGGGATTTCCTGGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTATAGCACAGCACTGCTaGAAGCTTGGCTTAGCTCGG | + |
Preference number: 2 (lower is better) Translates to: LGFPGLPTVLKAQATREPIAQHC*KLGLAR Trigger: CCGAGCTAAGCCAAGCTTTCAGCAGTGCTGTGCTAT...AGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCCAGGAAATCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR-3UTR CCA 90 bp | CTTTGGAGAGGTTTCAGCTACAGTAACTGCCTAGCTAAGGAGTGCCCGCAGGTTGTCTTTCATTCTCTCTaGAGGTTACATTGCACTAGA | + |
Preference number: 2 (lower is better) Translates to: LWRGFSYSNCLAKECPQVVFHSL*RLHCTR Trigger: TCTAGTGCAATGTAACCTCCAGAGAGAATGAAAGAC...AACCTGCGGGCACTCCTTAGCTAGGCAGTTACTGTAGCTGAAACCTCTCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR-3UTR GCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCAAGAGTTCTCTTAGGTTaGTTTTATCCTGTTTCTCTT | + |
Preference number: 2 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSRVLLG*FYPVSL Trigger: AAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCT...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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3UTR TCA 72 bp | TCCCTTCAGGTAAGACAGCCATGCTCCGCCCATACTTaGAACCTCCCAAGAGTGAGACAAGGTCTAACAGCT | + |
Preference number: 3 (lower is better) Translates to: SLQVRQPCSAHT*NLPRVRQGLTA Trigger: AGCTGTTAGACCTTGTCTCACTCTTGGGAGGTTTCAAGTATGGGCGGAGCATGGCTGTCTTACCTGAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR TCA 72 bp | CGGGATCCAGGAGTCTCTCCAGAAACAGTTTCTGAATaGACATCTGGACTGTGCACATCTGACACTTGGGAT | + |
Preference number: 3 (lower is better) Translates to: RDPGVSPETVSE*TSGLCTSDTWD Trigger: ATCCCAAGTGTCAGATGTGCACAGTCCAGATGTTCATTCAGAAACTGTTTCTGGAGAGACTCCTGGATCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR CCA 72 bp | TTGAAACCTCCCAAGAGTGAGACAAGGTCTAACAGCTaGTCCAGTCTGCAACTGGACTTCCTAGAACAGGTT | + |
Preference number: 3 (lower is better) Translates to: LKPPKSETRSNS*SSLQLDFLEQV Trigger: AACCTGTTCTAGGAAGTCCAGTTGCAGACTGGACCAGCTGTTAGACCTTGTCTCACTCTTGGGAGGTTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR CCA 72 bp | AGCAGTAGGATGCTTAAGGAAAAAGCTGGCCTCAGTTaGCTTTGGAGAGGTTTCAGCTACAGTAACTGCCTA | + |
Preference number: 3 (lower is better) Translates to: SSRMLKEKAGLS*LWRGFSYSNCL Trigger: TAGGCAGTTACTGTAGCTGAAACCTCTCCAAAGCCAACTGAGGCCAGCTTTTTCCTTAAGCATCCTACTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR GCA 72 bp | TTTCTCAGAGTAAGAATCCCTAGGTGGAATCTTGCTTaGTGTCCTCTTTCCAACAATGTTTGGCCTAAACAG | + |
Preference number: 3 (lower is better) Translates to: FLRVRIPRWNLA*CPLSNNVWPKQ Trigger: CTGTTTAGGCCAAACATTGTTGGAAAGAGGACAGCAAGCAAGATTCCACCTAGGGATTCTTACTCTGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR CCA 72 bp | TGGAATCTTGCTTGCTGTCCTCTTTCCAACAATGTTTaGCCTAAACAGAAGGGAGGGATTATCATGCTTAGT | + |
Preference number: 3 (lower is better) Translates to: WNLACCPLSNNV*PKQKGGIIMLS Trigger: ACTAAGCATGATAATCCCTCCCTTCTGTTTAGGCCAAACATTGTTGGAAAGAGGACAGCAAGCAAGATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | CTACCAAGCCCCTCGGTCAGGTCTGCAAATCAACCTACTGGAAGGGGTCCTGGCAGTGGGTCCCCATGGTaGGGAGCCCTGGATGGCAGT | + |
Preference number: 4 (lower is better) Translates to: LPSPSVRSANQPTGRGPGSGSPW*GALDGS Trigger: ACTGCCATCCAGGGCTCCTCACCATGGGGACCCACT...GCCAGGACCCCTTCCAGTAGGTTGATTTGCAGACCTGACCGAGGGGCTTGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | CTGGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTCAAATGGTCGCGAAGTaGGTCCCCATGGTGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: LGFLPYSKLRPLENLLACQMVAK*VPMVRS Trigger: GCTCCTCACCATGGGGACCCACTTCGCGACCATTTG...ACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | AGCACAGCACTGCTGAAAGCTTGGCTTAGCTCGGCCCCTCCAGGGTTACTCCTCGCCTTTCTACCGGCCTaGAAAAATTCCTCACCAGTG | + |
Preference number: 4 (lower is better) Translates to: STALLKAWLSSAPPGLLLAFLPA*KNSSPV Trigger: CACTGGTGAGGAATTTTTCCAGGCCGGTAGAAAGGC...GAGGAGTAACCCTGGAGGGGCCGAGCTAAGCCAAGCTTTCAGCAGTGCTGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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3UTR CAA 72 bp | GCTAGAGCTGGAGCAGGCTGGAAAGAACAGCATCCTTaGTGTCTCGGGACTTTCTACCAAGCCCCTCGGTCA | + |
Preference number: 4 (lower is better) Translates to: ARAGAGWKEQHP*CLGTFYQAPRS Trigger: TGACCGAGGGGCTTGGTAGAAAGTCCCGAGACACAAAGGATGCTGTTCTTTCCAGCCTGCTCCAGCTCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | CTACCAAGCCCCTCGGTCAGGTCTGCAAATCAACCTACTGGAAGGGGTCCTGGCGGTAATAAAAATGGGTaGCTGGCATCTGAACCCTGG | + |
Preference number: 4 (lower is better) Translates to: LPSPSVRSANQPTGRGPGGNKNG*LASEPW Trigger: CCAGGGTTCAGATGCCAGCCACCCATTTTTATTACC...GCCAGGACCCCTTCCAGTAGGTTGATTTGCAGACCTGACCGAGGGGCTTGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | GGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTCCTCTTCTTGTCCCTTTTaGGCGTCTTCCCAACCTCAA | + |
Preference number: 4 (lower is better) Translates to: GLPTVLKAQATREPPGMSSSCPF*ASSQPQ Trigger: TTGAGGTTGGGAAGACGCTCAAAAGGGACAAGAAGA...GGACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAAGTGGGTCCCCATGGTaGGGAGCCCTGGATGGCAGT | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLSGSPW*GALDGS Trigger: ACTGCCATCCAGGGCTCCTCACCATGGGGACCCACT...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | TCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTCCTCTCTCAGGAGCAGTAATAAAAATGGGTGGCTaGCATCTGAACCCTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: SKLRPLENLLACPLSGAVIKMGG*HLNPGP Trigger: GGGCCCAGGGTTCAGATGCCAGCCACCCATTTTTAT...TACTGCTCCTGAGAGAGGACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACGCTTGCTGGGCTTTCTaGCTTGGGAGGAAGTGCCGG | + |
Preference number: 4 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHACWAF*LGRKCR Trigger: CCGGCACTTCCTCCCAAGTCAGAAAGCCCAGCAAGC...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | TCCAGTCTGCAACTGGACTTCCTAGAACAGGTTAATAGCACAGCACTGCTGAAAGCTTGCTGGGCTTTCTaGCTTGGGAGGAAGTGCCGG | + |
Preference number: 4 (lower is better) Translates to: SSLQLDFLEQVNSTALLKACWAF*LGRKCR Trigger: CCGGCACTTCCTCCCAAGTCAGAAAGCCCAGCAAGC...TTTCAGCAGTGCTGTGCTATTAACCTGTTCTAGGAAGTCCAGTTGCAGACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | GCCCCTCGGTCAGGTCTGCAAATCAACCTACTGGAAGGGGTCCTGGCTTCCCTTGACCACTTGTTAAGATaGACATATGGGCAACTGTGT | + |
Preference number: 4 (lower is better) Translates to: APRSGLQINLLEGVLASLDHLLR*TYGQLC Trigger: ACACAGTTGCCCATATGTCCATCTTAACAAGTGGTC...AAGGGAAGCCAGGACCCCTTCCAGTAGGTTGATTTGCAGACCTGACCGAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | CCTGGCATGTCCTCTCTCAGGAGCAGTAGGATGCTTAAGGAAAAAGCTGGCCTCCTTTCTTCTGGATGTTaGGGATGTAAGATAGCGGGG | + |
Preference number: 4 (lower is better) Translates to: PGMSSLRSSRMLKEKAGLLSSGC*GCKIAG Trigger: CCCCGCTATCTTACATCCTCAACATCCAGAAGAAAG...GAGGCCAGCTTTTTCCTTAAGCATCCTACTGCTCCTGAGAGAGGACATGCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | TCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTCCTCTCTCAGGAGCAGTAAAAGCCTTCACAGAGTaGACGGCAAGACTTCGAGAT | + |
Preference number: 4 (lower is better) Translates to: SKLRPLENLLACPLSGAVKAFTE*TARLRD Trigger: ATCTCGAAGTCTTGCCGTCCACTCTGTGAAGGCTTT...TACTGCTCCTGAGAGAGGACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACAAATGGTCGCGAAGTaGGTCCCCATGGTGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSQMVAK*VPMVRS Trigger: GCTCCTCACCATGGGGACCCACTTCGCGACCATTTG...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | GGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTCCAGGTCTGTTTTGAGATaGGCTGGGAAAATTAAGACA | + |
Preference number: 4 (lower is better) Translates to: GLPTVLKAQATREPPGMSRSVLR*AGKIKT Trigger: TGTCTTAATTTTCCCAGCTCATCTCAAAACAGACCT...GGACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | CTTTGGAGAGGTTTCAGCTACAGTAACTGCCTAGCTAAGGAGTGCCCGCAGGTTGGAGAACAGGAGGACTaGGTCTGTAAGGTTGCATTT | + |
Preference number: 4 (lower is better) Translates to: LWRGFSYSNCLAKECPQVGEQED*VCKVAF Trigger: AAATGCAACCTTACAGACTCAGTCCTCCTGTTCTCC...AACCTGCGGGCACTCCTTAGCTAGGCAGTTACTGTAGCTGAAACCTCTCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR GCA 90 bp | CTGGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTTTTTCATTTGGACGTTaGTGGTGTCGTTACCATCCA | + |
Preference number: 4 (lower is better) Translates to: LGFLPYSKLRPLENLLACFSFGR*WCRYHP Trigger: TGGATGGTAACGACACCAGCAACGTCCAAATGAAAA...ACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | AGCACAGCACTGCTGAAAGCTTGGCTTAGCTCGGCCCCTCCAGGGTTACTCCTCTGGAATTTTCTGTCTTaGAAGTCATACAGCATCACA | + |
Preference number: 4 (lower is better) Translates to: STALLKAWLSSAPPGLLLWNFLS*KSYSIT Trigger: TGTGATGCTGTATGACTTCCAAGACAGAAAATTCCA...GAGGAGTAACCCTGGAGGGGCCGAGCTAAGCCAAGCTTTCAGCAGTGCTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | CCAGCACCTTGTGTAACCGTATCTAAAACTGGACAAAGCCCAGCCACCCTGTCAGAAAGGATGCGGGGCTaGAATTTTCTGTCTTGGAAG | + |
Preference number: 4 (lower is better) Translates to: PAPCVTVSKTGQSPATLSERMRG*NFLSWK Trigger: CTTCCAAGACAGAAAATTCCAGCCCCGCATCCTTTC...TGACAGGGTGGCTGGGCTTTGTCCAGTTTTAGATACGGTTACACAAGGTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTTCCAGTAGACCTTTaGCTGCTGCCCTGGCCAGAA | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSLPVDL*LLPWPE Trigger: TTCTGGCCAGGGCAGCAGCCAAAGGTCTACTGGAAG...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR GCA 90 bp | GGCCTCAGTTGGCTTTGGAGAGGTTTCAGCTACAGTAACTGCCTAGCTAAGGAGTTGAGACACAGTCTTTaGTGGGGCGGACATTTTTGT | + |
Preference number: 4 (lower is better) Translates to: GLSWLWRGFSYSNCLAKELRHSL*WGGHFC Trigger: ACAAAAATGTCCGCCCCAGCAAAGACTGTGTCTCAA...CTCCTTAGCTAGGCAGTTACTGTAGCTGAAACCTCTCCAAAGCCAACTGAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR GCA 90 bp | AGCACAGCACTGCTGAAAGCTTGGCTTAGCTCGGCCCCTCCAGGGTTACTCCTCTGTGCAATAGACAATTaGTTGAACTTTGGTAACTTC | + |
Preference number: 4 (lower is better) Translates to: STALLKAWLSSAPPGLLLCAIDN*LNFGNF Trigger: GAAGTTACCAAAGTTCAAGCAATTGTCTATTGCACA...GAGGAGTAACCCTGGAGGGGCCGAGCTAAGCCAAGCTTTCAGCAGTGCTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | CCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTCCTCTCTCGACTTCTTGAACTTCTaGTATGGTCTCTTCATTCTC | + |
Preference number: 4 (lower is better) Translates to: PTVLKAQATREPPGMSSLDFLNF*YGLFIL Trigger: GAGAATGAAGAGACCATACCAGAAGTTCAAGAAGTC...GAGAGAGGACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCTTCCAGTAGACCTTTaGCTGCTGCCCTGGCCAGAA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLLPVDL*LLPWPE Trigger: TTCTGGCCAGGGCAGCAGCCAAAGGTCTACTGGAAG...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | CTCAGAGTAAGAATCCCTAGGTGGAATCTTGCTTGCTGTCCTCTTTCCAACAATCTTCCAGTAGACCTTTaGCTGCTGCCCTGGCCAGAA | + |
Preference number: 4 (lower is better) Translates to: LRVRIPRWNLACCPLSNNLPVDL*LLPWPE Trigger: TTCTGGCCAGGGCAGCAGCCAAAGGTCTACTGGAAG...ATTGTTGGAAAGAGGACAGCAAGCAAGATTCCACCTAGGGATTCTTACTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCAAATGGTCGCGAAGTaGGTCCCCATGGTGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRQMVAK*VPMVRS Trigger: GCTCCTCACCATGGGGACCCACTTCGCGACCATTTG...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | CTGGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTTGCGATTGTGGTACTTaGGAAGATATAGCTATCTAT | + |
Preference number: 4 (lower is better) Translates to: LGFLPYSKLRPLENLLACCDCGT*EDIAIY Trigger: ATAGATAGCTATATCTTCTCAAGTACCACAATCGCA...ACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | TGTCCTCTCTCAGGAGCAGTAGGATGCTTAAGGAAAAAGCTGGCCTCAGTTGGCGGAAAATTAAGACATTaGAGCAGTGCTGGTCTACTG | + |
Preference number: 4 (lower is better) Translates to: CPLSGAVGCLRKKLASVGGKLRH*SSAGLL Trigger: CAGTAGACCAGCACTGCTTCAATGTCTTAATTTTCC...GCCAACTGAGGCCAGCTTTTTCCTTAAGCATCCTACTGCTCCTGAGAGAGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | GGCCCCTCCAGGGTTACTCCTCACCTGTCTTTCATTCTCTCTGGAGGTTACATTGTTAAGATGGACATATaGGCAACTGTGTACCACGAA | + |
Preference number: 4 (lower is better) Translates to: GPSRVTPHLSFILSGGYIVKMDI*ATVYHE Trigger: TTCGTGGTACACAGTTGCCCATATGTCCATCTTAAC...AATGTAACCTCCAGAGAGAATGAAAGACAGGTGAGGAGTAACCCTGGAGGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | GGCCTCAGTTGGCTTTGGAGAGGTTTCAGCTACAGTAACTGCCTAGCTAAGGAGTCGGAGATTTTCATTTaGACGTTGCTGGTGTCGTTA | + |
Preference number: 4 (lower is better) Translates to: GLSWLWRGFSYSNCLAKESEIFI*TLLVSL Trigger: TAACGACACCAGCAACGTCCAAATGAAAATCTCCGA...CTCCTTAGCTAGGCAGTTACTGTAGCTGAAACCTCTCCAAAGCCAACTGAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAGCCTTTCTACCGGCCTaGAAAAATTCCTCACCAGTG | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLAFLPA*KNSSPV Trigger: CACTGGTGAGGAATTTTTCCAGGCCGGTAGAAAGGC...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTATAAAAATGGGTGGCTaGCATCTGAACCCTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLIKMGG*HLNPGP Trigger: GGGCCCAGGGTTCAGATGCCAGCCACCCATTTTTAT...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAACCACGAACCCGTGTTaGCCATTAGGACATCATCAT | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLTTNPC*PLGHHH Trigger: ATGATGATGTCCTAATGGTCAACACGGGTTCGTGGT...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | TCCAGTCTGCAACTGGACTTCCTAGAACAGGTTAATAGCACAGCACTGCTGAAAACCACGAACCCGTGTTaGCCATTAGGACATCATCAT | + |
Preference number: 4 (lower is better) Translates to: SSLQLDFLEQVNSTALLKTTNPC*PLGHHH Trigger: ATGATGATGTCCTAATGGTCAACACGGGTTCGTGGT...TTTCAGCAGTGCTGTGCTATTAACCTGTTCTAGGAAGTCCAGTTGCAGACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAGGAGAACAGGAGGACTaGGTCTGTAAGGTTGCATTT | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLGEQED*VCKVAF Trigger: AAATGCAACCTTACAGACTCAGTCCTCCTGTTCTCC...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCATCTTCTTGTCCCTTTTaGGCGTCTTCCCAACCTCAA | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSSSCPF*ASSQPQ Trigger: TTGAGGTTGGGAAGACGCTCAAAAGGGACAAGAAGA...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | CCAGCACCTTGTGTAACCGTATCTAAAACTGGACAAAGCCCAGCCACCCTGTCATCCTCCATGTTTTCTTaGTCAAAAAGGTCCCTTTCA | + |
Preference number: 4 (lower is better) Translates to: PAPCVTVSKTGQSPATLSSSMFS*SKRSLS Trigger: TGAAAGGGACCTTTTTGACCAAGAAAACATGGAGGA...TGACAGGGTGGCTGGGCTTTGTCCAGTTTTAGATACGGTTACACAAGGTGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
||
CDS-3UTR CCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAGAAAGGATGCGGGGCTaGAATTTTCTGTCTTGGAAG | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLERMRG*NFLSWK Trigger: CTTCCAAGACAGAAAATTCCAGCCCCGCATCCTTTC...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR CCA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACAAAGCCTTCACAGAGTaGACGGCAAGACTTCGAGAT | + |
Preference number: 4 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHKAFTE*TARLRD Trigger: ATCTCGAAGTCTTGCCGTCCACTCTGTGAAGGCTTT...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTATAAAAATGGGTGGCTaGCATCTGAACCCTGGGCCC | + |
Preference number: 4 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRIKMGG*HLNPGP Trigger: GGGCCCAGGGTTCAGATGCCAGCCACCCATTTTTAT...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR CCA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACGGTAATAAAAATGGGTaGCTGGCATCTGAACCCTGG | + |
Preference number: 4 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHGNKNG*LASEPW Trigger: CCAGGGTTCAGATGCCAGCCACCCATTTTTATTACC...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR CCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCAGGTAATAAAAATGGGTaGCTGGCATCTGAACCCTGG | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSGNKNG*LASEPW Trigger: CCAGGGTTCAGATGCCAGCCACCCATTTTTATTACC...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR TCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTGGATCCGAATACCCTaGAAAATGTTCGCTGCCGTA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLWIRIP*KMFAAV Trigger: TACGGCAGCGAACATTTTTCAGGGTATTCGGATCCA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR TCA 90 bp | TTTCTCAGAGTAAGAATCCCTAGGTGGAATCTTGCTTGCTGTCCTCTTTCCAACTGGATCCGAATACCCTaGAAAATGTTCGCTGCCGTA | + |
Preference number: 4 (lower is better) Translates to: FLRVRIPRWNLACCPLSNWIRIP*KMFAAV Trigger: TACGGCAGCGAACATTTTTCAGGGTATTCGGATCCA...GTTGGAAAGAGGACAGCAAGCAAGATTCCACCTAGGGATTCTTACTCTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
||
CDS-3UTR TCA 90 bp | TGTCCTCTCTCAGGAGCAGTAGGATGCTTAAGGAAAAAGCTGGCCTCAGTTGGCTTCCGTAATTTATTATaGCTTTGTCTGGCGACCTTT | + |
Preference number: 4 (lower is better) Translates to: CPLSGAVGCLRKKLASVGFRNLL*LCLATF Trigger: AAAGGTCGCCAGACAAAGTCATAATAAATTACGGAA...GCCAACTGAGGCCAGCTTTTTCCTTAAGCATCCTACTGCTCCTGAGAGAGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
||
CDS-3UTR TCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTACCACGAACCCGTGTTaGCCATTAGGACATCATCAT | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLTTNPC*PLGHHH Trigger: ATGATGATGTCCTAATGGTCAACACGGGTTCGTGGT...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR TCA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACGAGGTAGCAACAGAATaGCCTTCACATTCTGTAACC | + |
Preference number: 4 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHEVATE*PSHSVT Trigger: GGTTACAGAATGTGAAGGTCATTCTGTTGCTACCTC...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR TCA 90 bp | GGTTACTCCTCACCTGTCTTTCATTCTCTCTGGAGGTTACATTGCACTAGAGGAGAGGTAGCAACAGAATaGCCTTCACATTCTGTAACC | + |
Preference number: 4 (lower is better) Translates to: GYSSPVFHSLWRLHCTRGEVATE*PSHSVT Trigger: GGTTACAGAATGTGAAGGTCATTCTGTTGCTACCTC...TCCTCTAGTGCAATGTAACCTCCAGAGAGAATGAAAGACAGGTGAGGAGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
||
CDS-3UTR TCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGGAGAACAGGAGGACTaGGTCTGTAAGGTTGCATTT | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLGEQED*VCKVAF Trigger: AAATGCAACCTTACAGACTCAGTCCTCCTGTTCTCC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR TCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTCTTCTTGTCCCTTTTaGGCGTCTTCCCAACCTCAA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLSSCPF*ASSQPQ Trigger: TTGAGGTTGGGAAGACGCTCAAAAGGGACAAGAAGA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR GCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAGCAGTGCTGGTCTACTaGATAGACTTTCTCATTGAC | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLAVLVY*IDFLID Trigger: GTCAATGAGAAAGTCTATGCAGTAGACCAGCACTGC...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR GCA 90 bp | GGTTACTCCTCACCTGTCTTTCATTCTCTCTGGAGGTTACATTGCACTAGAGGAGCAGTGCTGGTCTACTaGATAGACTTTCTCATTGAC | + |
Preference number: 4 (lower is better) Translates to: GYSSPVFHSLWRLHCTRGAVLVY*IDFLID Trigger: GTCAATGAGAAAGTCTATGCAGTAGACCAGCACTGC...TCCTCTAGTGCAATGTAACCTCCAGAGAGAATGAAAGACAGGTGAGGAGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
||
CDS-3UTR GCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTATTGAGACACAGTCTTTaGTGGGGCGGACATTTTTGT | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLLRHSL*WGGHFC Trigger: ACAAAAATGTCCGCCCCAGCAAAGACTGTGTCTCAA...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCATTAACCCCTGAGCTTTaGTATTCCAGTGCTTTCTCA | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSLTPEL*YSSAFS Trigger: TGAGAAAGCACTGGAATATCAAAGCTCAGGGGTTAA...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCATTGCATTTTAACCCCTaGGCTTTGATATTCCAGTGC | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSLHFNP*ALIFQC Trigger: GCACTGGAATATCAAAGCTCAGGGGTTAAAATGCAA...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTACCTAGAAGAGTCCTTTaGTCCAATGAAGCGGTAATA | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLPRRVL*SNEAVI Trigger: TATTACCGCTTCATTGGATCAAAGGACTCTTCTAGG...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031109.7 |
||
CDS-3UTR GCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTATTTTCATTTGGACGTTaGTGGTGTCGTTACCATCCA | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLFSFGR*WCRYHP Trigger: TGGATGGTAACGACACCAGCAACGTCCAAATGAAAA...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTAAAGCCTTCACAGAGTaGACGGCAAGACTTCGAGAT | + |
Preference number: 4 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRKAFTE*TARLRD Trigger: ATCTCGAAGTCTTGCCGTCCACTCTGTGAAGGCTTT...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTATCGGAGATTTTCATTTaGACGTTGCTGGTGTCGTTA | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLSEIFI*TLLVSL Trigger: TAACGACACCAGCAACGTCCAAATGAAAATCTCCGA...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTGCCTTTCTACCGGCCTaGAAAAATTCCTCACCAGTG | + |
Preference number: 4 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLAFLPA*KNSSPV Trigger: CACTGGTGAGGAATTTTTCCAGGCCGGTAGAAAGGC...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGGAAAATTAAGACATTaGAGCAGTGCTGGTCTACTG | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLGKLRH*SSAGLL Trigger: CAGTAGACCAGCACTGCTTCAATGTCTTAATTTTCC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACAGGTCTGTTTTGAGATaGGCTGGGAAAATTAAGACA | + |
Preference number: 4 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHRSVLR*AGKIKT Trigger: TGTCTTAATTTTCCCAGCTCATCTCAAAACAGACCT...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTTAACCCCTGAGCTTTaGTATTCCAGTGCTTTCTCA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLLTPEL*YSSAFS Trigger: TGAGAAAGCACTGGAATATCAAAGCTCAGGGGTTAA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | CTCAGAGTAAGAATCCCTAGGTGGAATCTTGCTTGCTGTCCTCTTTCCAACAATTTAACCCCTGAGCTTTaGTATTCCAGTGCTTTCTCA | + |
Preference number: 4 (lower is better) Translates to: LRVRIPRWNLACCPLSNNLTPEL*YSSAFS Trigger: TGAGAAAGCACTGGAATATCAAAGCTCAGGGGTTAA...ATTGTTGGAAAGAGGACAGCAAGCAAGATTCCACCTAGGGATTCTTACTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | TTTCTCAGAGTAAGAATCCCTAGGTGGAATCTTGCTTGCTGTCCTCTTTCCAACTTGCATTTTAACCCCTaGGCTTTGATATTCCAGTGC | + |
Preference number: 4 (lower is better) Translates to: FLRVRIPRWNLACCPLSNLHFNP*ALIFQC Trigger: GCACTGGAATATCAAAGCTCAGGGGTTAAAATGCAA...GTTGGAAAGAGGACAGCAAGCAAGATTCCACCTAGGGATTCTTACTCTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR GCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTTTTCATTTGGACGTTaGTGGTGTCGTTACCATCCA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLFSFGR*WCRYHP Trigger: TGGATGGTAACGACACCAGCAACGTCCAAATGAAAA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTGAAAGGATGCGGGGCTaGAATTTTCTGTCTTGGAAG | + |
Preference number: 4 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLERMRG*NFLSWK Trigger: CTTCCAAGACAGAAAATTCCAGCCCCGCATCCTTTC...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTACTTGAACTTCTGGTATaGTCTCTTCATTCTCGGAAA | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLLELLV*SLHSRK Trigger: TTTCCGAGAATGAAGAGACCATACCAGAAGTTCAAG...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAGACTTCTTGAACTTCTaGTATGGTCTCTTCATTCTC | + |
Preference number: 4 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLDFLNF*YGLFIL Trigger: GAGAATGAAGAGACCATACCAGAAGTTCAAGAAGTC...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGTTAAGATGGACATATaGGCAACTGTGTACCACGAA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLVKMDI*ATVYHE Trigger: TTCGTGGTACACAGTTGCCCATATGTCCATCTTAAC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCATGCGATTGTGGTACTTaGGAAGATATAGCTATCTAT | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSCDCGT*EDIAIY Trigger: ATAGATAGCTATATCTTCTCAAGTACCACAATCGCA...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTTTGCATTTTAACCCCTaGGCTTTGATATTCCAGTGC | + |
Preference number: 4 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRLHFNP*ALIFQC Trigger: GCACTGGAATATCAAAGCTCAGGGGTTAAAATGCAA...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTCCTCCATGTTTTCTTaGTCAAAAAGGTCCCTTTCA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLSSMFS*SKRSLS Trigger: TGAAAGGGACCTTTTTGACCAAGAAAACATGGAGGA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTGGAATTTTCTGTCTTaGAAGTCATACAGCATCACA | + |
Preference number: 4 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHWNFLS*KSYSIT Trigger: TGTGATGCTGTATGACTTCCAAGACAGAAAATTCCA...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCATGGAATTTTCTGTCTTaGAAGTCATACAGCATCACA | + |
Preference number: 4 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSWNFLS*KSYSIT Trigger: TGTGATGCTGTATGACTTCCAAGACAGAAAATTCCA...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | CTCAGAGTAAGAATCCCTAGGTGGAATCTTGCTTGCTGTCCTCTTTCCAACAATCTTGAACTTCTGGTATaGTCTCTTCATTCTCGGAAA | + |
Preference number: 4 (lower is better) Translates to: LRVRIPRWNLACCPLSNNLELLV*SLHSRK Trigger: TTTCCGAGAATGAAGAGACCATACCAGAAGTTCAAG...ATTGTTGGAAAGAGGACAGCAAGCAAGATTCCACCTAGGGATTCTTACTCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
||
CDS-3UTR CCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGACTTCTTGAACTTCTaGTATGGTCTCTTCATTCTC | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLDFLNF*YGLFIL Trigger: GAGAATGAAGAGACCATACCAGAAGTTCAAGAAGTC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTGACCACTTGTTAAGATaGACATATGGGCAACTGTGT | + |
Preference number: 4 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRDHLLR*TYGQLC Trigger: ACACAGTTGCCCATATGTCCATCTTAACAAGTGGTC...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTGCGATTGTGGTACTTaGGAAGATATAGCTATCTAT | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLCDCGT*EDIAIY Trigger: ATAGATAGCTATATCTTCTCAAGTACCACAATCGCA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTTTCCTAACTGTCTCTaGCAGAATATGGTAAATCGA | + |
Preference number: 4 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLFPNCL*QNMVNR Trigger: TCGATTTACCATATTCTGCCAGAGACAGTTAGGAAA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
||
CDS-3UTR CCA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTGACCACTTGTTAAGATaGACATATGGGCAACTGTGT | + |
Preference number: 4 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLDHLLR*TYGQLC Trigger: ACACAGTTGCCCATATGTCCATCTTAACAAGTGGTC...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTTCGGAGATTTTCATTTaGACGTTGCTGGTGTCGTTA | + |
Preference number: 4 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLSEIFI*TLLVSL Trigger: TAACGACACCAGCAACGTCCAAATGAAAATCTCCGA...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS-3UTR TCA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTTTCCGTAATTTATTATaGCTTTGTCTGGCGACCTTT | + |
Preference number: 4 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRFRNLL*LCLATF Trigger: AAAGGTCGCCAGACAAAGTCATAATAAATTACGGAA...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTCTTGAACTTCTGGTATaGTCTCTTCATTCTCGGAAA | + |
Preference number: 4 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLLELLV*SLHSRK Trigger: TTTCCGAGAATGAAGAGACCATACCAGAAGTTCAAG...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTTTTCCTAACTGTCTCTaGCAGAATATGGTAAATCGA | + |
Preference number: 4 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRFPNCL*QNMVNR Trigger: TCGATTTACCATATTCTGCCAGAGACAGTTAGGAAA...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CCA 90 bp | GTCCTCTTTCCAACAATGTTTGGCCTAAACAGAAGGGAGGGATTATCATGCTTATTTCCTAACTGTCTCTaGCAGAATATGGTAAATCGA | + |
Preference number: 4 (lower is better) Translates to: VLFPTMFGLNRREGLSCLFPNCL*QNMVNR Trigger: TCGATTTACCATATTCTGCCAGAGACAGTTAGGAAA...TAAGCATGATAATCCCTCCCTTCTGTTTAGGCCAAACATTGTTGGAAAGAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR TCA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTTTCCGTAATTTATTATaGCTTTGTCTGGCGACCTTT | + |
Preference number: 4 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLFRNLL*LCLATF Trigger: AAAGGTCGCCAGACAAAGTCATAATAAATTACGGAA...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS CCA 90 bp | TCTTCCCAACCTCAACCCCTTCCAGTAGACCTTTGGCTGCTGCCCTaGCCAGAACGTCTTTCACTGACACTGTCTCAGATGGGTCCCGCT | + |
Preference number: 5 (lower is better) Translates to: SSQPQPLPVDLWLLP*PERLSLTLSQMGPA Trigger: AGCGGGACCCATCTGAGACAGTGTCAGTGAAAGACGTTCTGGCCAGGGCAGCAGCCAAAGGTCTACTGGAAGGGGTTGAGGTTGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 90 bp | GACGTTGCTGGTGTCGTTACCATCCACTGCCAAATGGTCGCGAAGTaGGTCCCCATGGTGAGGAGCCCTGGATGGCAGTGCTTTCGATTT | + |
Preference number: 5 (lower is better) Translates to: DVAGVVTIHCQMVAK*VPMVRSPGWQCFRF Trigger: AAATCGAAAGCACTGCCATCCAGGGCTCCTCACCATGGGGACCCACTTCGCGACCATTTGGCAGTGGATGGTAACGACACCAGCAACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | GGTCTGCAAATCAACCTACTGGAAGGGGTCCTGGCTTCCCTTCAGGTAAGACAGCCTTCCAGTAGACCTTaGGCTGCTGCCCTGGCCAGA | + |
Preference number: 5 (lower is better) Translates to: GLQINLLEGVLASLQVRQPSSRP*AAALAR Trigger: TCTGGCCAGGGCAGCAGCCAAAGGTCTACTGGAAGG...CTGTCTTACCTGAAGGGAAGCCAGGACCCCTTCCAGTAGGTTGATTTGCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AGCACAGCACTGCTGAAAGCTTGGCTTAGCTCGGCCCCTCCAGGGTTACTCCTCGTTGAAGAGTTTGTATaGGCGACTACATCCCCCGAC | + |
Preference number: 5 (lower is better) Translates to: STALLKAWLSSAPPGLLLVEEFV*ATTSPD Trigger: GTCGGGGGATGTAGTCGCCAATACAAACTCTTCAAC...GAGGAGTAACCCTGGAGGGGCCGAGCTAAGCCAAGCTTTCAGCAGTGCTGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | CTGGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTGGGGTCGATAAAGGCTaGCTGGGCTTTCTGACTTGG | + |
Preference number: 5 (lower is better) Translates to: LGFLPYSKLRPLENLLACGVDKG*LGFLTW Trigger: CCAAGTCAGAAAGCCCAGCAAGCCTTTATCGACCCC...ACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS CCA 90 bp | CAAAGGAATCACTTTGCCTTCTGGCCGCGCTCTCACAAAGTTCGTTaGCCTTTCTACCGGCCTGGAAAAATTCCTCACCAGTGGGGTCGA | + |
Preference number: 5 (lower is better) Translates to: QRNHFAFWPRSHKVR*PFYRPGKIPHQWGR Trigger: TCGACCCCACTGGTGAGGAATTTTTCCAGGCCGGTAGAAAGGCCAACGAACTTTGTGAGAGCGCGGCCAGAAGGCAAAGTGATTCCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | GGCCTCAGTTGGCTTTGGAGAGGTTTCAGCTACAGTAACTGCCTAGCTAAGGAGGAGAGGGCGTCGTGTTaGATTCGACATCTCGCCAAG | + |
Preference number: 5 (lower is better) Translates to: GLSWLWRGFSYSNCLAKEERASC*IRHLAK Trigger: CTTGGCGAGATGTCGAATCAAACACGACGCCCTCTC...CTCCTTAGCTAGGCAGTTACTGTAGCTGAAACCTCTCCAAAGCCAACTGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AGCACAGCACTGCTGAAAGCTTGGCTTAGCTCGGCCCCTCCAGGGTTACTCCTCCTGGGGCGGACATTTTaGTTGAAGTACTTATCTTGC | + |
Preference number: 5 (lower is better) Translates to: STALLKAWLSSAPPGLLLLGRTF*LKYLSC Trigger: GCAAGATAAGTACTTCAACAAAAATGTCCGCCCCAG...GAGGAGTAACCCTGGAGGGGCCGAGCTAAGCCAAGCTTTCAGCAGTGCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | TCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTCCTCTCTCAGGAGCAGTACTCTTCTTGTCCCTTTaGAGCGTCTTCCCAACCTCA | + |
Preference number: 5 (lower is better) Translates to: SKLRPLENLLACPLSGAVLFLSL*SVFPTS Trigger: TGAGGTTGGGAAGACGCTCAAAAGGGACAAGAAGAG...TACTGCTCCTGAGAGAGGACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS CCA 90 bp | AAAATGGGTGGCTGGCATCTGAACCCTGGGCCCCTGGGAACTCAATaGGAATATCACTGGCGGCAGAACGATTTCAATTGGTTTCAAAGG | + |
Preference number: 5 (lower is better) Translates to: KMGGWHLNPGPLGTQ*EYHWRQNDFNWFQR Trigger: CCTTTGAAACCAATTGAAATCGTTCTGCCGCCAGTGATATTCCCATTGAGTTCCCAGGGGCCCAGGGTTCAGATGCCAGCCACCCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCCTTCCAGTAGACCTTaGGCTGCTGCCCTGGCCAGA | + |
Preference number: 5 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLPSSRP*AAALAR Trigger: TCTGGCCAGGGCAGCAGCCAAAGGTCTACTGGAAGG...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTCCAGGGAAGCGAGTaGGGAGATCTCCTCCATGTT | + |
Preference number: 5 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSLQGSE*GDLLHV Trigger: AACATGGAGGAGATCTCCCAACTCGCTTCCCTGGAG...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | CTACCAAGCCCCTCGGTCAGGTCTGCAAATCAACCTACTGGAAGGGGTCCTGGCGCAAGACTTCGAGATTaGTCCTGGAAAATAAGTTTA | + |
Preference number: 5 (lower is better) Translates to: LPSPSVRSANQPTGRGPGARLRD*SWKISL Trigger: TAAACTTATTTTCCAGGACAAATCTCGAAGTCTTGC...GCCAGGACCCCTTCCAGTAGGTTGATTTGCAGACCTGACCGAGGGGCTTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACGGGGTCGATAAAGGCTaGCTGGGCTTTCTGACTTGG | + |
Preference number: 5 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHGVDKG*LGFLTW Trigger: CCAAGTCAGAAAGCCCAGCAAGCCTTTATCGACCCC...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS TCA 90 bp | AGCGGGAGGAGGAGGGCTGCAGGGGTTCACTTCCGTAATTTATTATaGCTTTGTCTGGCGACCTTTGGATCCGAATACCCTGAAAAATGT | + |
Preference number: 5 (lower is better) Translates to: SGRRRAAGVHFRNLL*LCLATFGSEYPEKC Trigger: ACATTTTTCAGGGTATTCGGATCCAAAGGTCGCCAGACAAAGTCATAATAAATTACGGAAGTGAACCCCTGCAGCCCTCCTCCTCCCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 90 bp | GGAGGGCTGCAGGGGTTCACTTCCGTAATTTATTATGACTTTGTCTaGCGACCTTTGGATCCGAATACCCTGAAAAATGTTCGCTGCCGT | + |
Preference number: 5 (lower is better) Translates to: GGLQGFTSVIYYDFV*RPLDPNTLKNVRCR Trigger: ACGGCAGCGAACATTTTTCAGGGTATTCGGATCCAAAGGTCGCCAGACAAAGTCATAATAAATTACGGAAGTGAACCCCTGCAGCCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCTCCAGGGAAGCGAGTaGGGAGATCTCCTCCATGTT | + |
Preference number: 5 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLLQGSE*GDLLHV Trigger: AACATGGAGGAGATCTCCCAACTCGCTTCCCTGGAG...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | CCTGGCATGTCCTCTCTCAGGAGCAGTAGGATGCTTAAGGAAAAAGCTGGCCTCCTGGAATTTTCTGTCTaGGAAGTCATACAGCATCAC | + |
Preference number: 5 (lower is better) Translates to: PGMSSLRSSRMLKEKAGLLEFSV*EVIQHH Trigger: GTGATGCTGTATGACTTCCAAGACAGAAAATTCCAG...GAGGCCAGCTTTTTCCTTAAGCATCCTACTGCTCCTGAGAGAGGACATGCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGAGAGGGCGTCGTGTTaGATTCGACATCTCGCCAAG | + |
Preference number: 5 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLERASC*IRHLAK Trigger: CTTGGCGAGATGTCGAATCAAACACGACGCCCTCTC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | CTGGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTCCTGGCATGTGCAATAGACAATTGCTaGAACTTTGGTAACTTCGTG | + |
Preference number: 5 (lower is better) Translates to: LGFLPYSKLRPLENLLACAIDNC*NFGNFV Trigger: CACGAAGTTACCAAAGTTCAAGCAATTGTCTATTGC...ACATGCCAGGAGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS CCA 90 bp | CTGGGAACTCAATGGGAATATCACTGGCGGCAGAACGATTTCAATTaGTTTCAAAGGAATCACTTTGCCTTCTGGCCGCGCTCTCACAAA | + |
Preference number: 5 (lower is better) Translates to: LGTQWEYHWRQNDFN*FQRNHFAFWPRSHK Trigger: TTTGTGAGAGCGCGGCCAGAAGGCAAAGTGATTCCTTTGAAACCAATTGAAATCGTTCTGCCGCCAGTGATATTCCCATTGAGTTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCAGTTGAAGAGTTTGTATaGGCGACTACATCCCCCGAC | + |
Preference number: 5 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSVEEFV*ATTSPD Trigger: GTCGGGGGATGTAGTCGCCAATACAAACTCTTCAAC...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACCTCTTCTTGTCCCTTTaGAGCGTCTTCCCAACCTCA | + |
Preference number: 5 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHLFLSL*SVFPTS Trigger: TGAGGTTGGGAAGACGCTCAAAAGGGACAAGAAGAG...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS TCA 90 bp | GCAGCCAATTTTGTCTTAAAGCCGTTTAGAAGGTTCTCGACTTCTTaGACTTCTGGTATGGTCTCTTCATTCTCGGAAAGGATGCGGGGC | + |
Preference number: 5 (lower is better) Translates to: AANFVLKPFRRFSTS*TSGMVSSFSERMRG Trigger: GCCCCGCATCCTTTCCGAGAATGAAGAGACCATACCAGAAGTTCAAGAAGTCGAGAACCTTCTAAACGGCTTTAAGACAAAATTGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGTTGAAGAGTTTGTATaGGCGACTACATCCCCCGAC | + |
Preference number: 5 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLVEEFV*ATTSPD Trigger: GTCGGGGGATGTAGTCGCCAATACAAACTCTTCAAC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | GGTCTGCAAATCAACCTACTGGAAGGGGTCCTGGCTTCCCTTCAGGTAAGACAGTTGCGATTGTGGTACTaGAGAAGATATAGCTATCTA | + |
Preference number: 5 (lower is better) Translates to: GLQINLLEGVLASLQVRQLRLWY*RRYSYL Trigger: TAGATAGCTATATCTTCTCAAGTACCACAATCGCAA...CTGTCTTACCTGAAGGGAAGCCAGGACCCCTTCCAGTAGGTTGATTTGCAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | TTGGGATTTCCTGGGCTTCCTACCGTACTCAAAGCTCAGGCCACTAGAGAACCTGGGCGGACATTTTTGTaGAAGTACTTATCTTGCTTT | + |
Preference number: 5 (lower is better) Translates to: LGFPGLPTVLKAQATREPGRTFL*KYLSCF Trigger: AAAGCAAGATAAGTACTTCAACAAAAATGTCCGCCC...AGGTTCTCTAGTGGCCTGAGCTTTGAGTACGGTAGGAAGCCCAGGAAATCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTGGGGTCGATAAAGGCTaGCTGGGCTTTCTGACTTGG | + |
Preference number: 5 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLGVDKG*LGFLTW Trigger: CCAAGTCAGAAAGCCCAGCAAGCCTTTATCGACCCC...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS GCA 90 bp | CGACTTCTTGAACTTCTGGTATGGTCTCTTCATTCTCGGAAAGGATaGGGGGCTGGAATTTTCTGTCTTGGAAGTCATACAGCATCACAA | + |
Preference number: 5 (lower is better) Translates to: RLLELLVWSLHSRKG*GAGIFCLGSHTASQ Trigger: TTGTGATGCTGTATGACTTCCAAGACAGAAAATTCCAGCCCCGCATCCTTTCCGAGAATGAAGAGACCATACCAGAAGTTCAAGAAGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTCCTCCATGTTTTCTaGGTCAAAAAGGTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSLLHVF*VKKVPF Trigger: GAAAGGGACCTTTTTGACCAAGAAAACATGGAGGAG...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTACTCCTCCATGTTTTCTaGGTCAAAAAGGTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLLLHVF*VKKVPF Trigger: GAAAGGGACCTTTTTGACCAAGAAAACATGGAGGAG...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | GGTTACTCCTCACCTGTCTTTCATTCTCTCTGGAGGTTACATTGCACTAGAGGACTCCTCCATGTTTTCTaGGTCAAAAAGGTCCCTTTC | + |
Preference number: 5 (lower is better) Translates to: GYSSPVFHSLWRLHCTRGLLHVF*VKKVPF Trigger: GAAAGGGACCTTTTTGACCAAGAAAACATGGAGGAG...TCCTCTAGTGCAATGTAACCTCCAGAGAGAATGAAAGACAGGTGAGGAGTAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | GGTTACTCCTCACCTGTCTTTCATTCTCTCTGGAGGTTACATTGCACTAGAGGAGTTGAAGTACTTATCTaGCTTTCTCGGTGCAAGAGC | + |
Preference number: 5 (lower is better) Translates to: GYSSPVFHSLWRLHCTRGVEVLI*LSRCKS Trigger: GCTCTTGCACCGAGAAAGCAAGATAAGTACTTCAAC...TCCTCTAGTGCAATGTAACCTCCAGAGAGAATGAAAGACAGGTGAGGAGTAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | AAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACCTGGAATTTTCTGTCTaGGAAGTCATACAGCATCAC | + |
Preference number: 5 (lower is better) Translates to: KLKQVKCQLKDSVLSRLHLEFSV*EVIQHH Trigger: GTGATGCTGTATGACTTCCAAGACAGAAAATTCCAG...GTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | GAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTGGAATTTTCTGTCTaGGAAGTCATACAGCATCAC | + |
Preference number: 5 (lower is better) Translates to: EAQAGKMPVKRQCAQPSSLEFSV*EVIQHH Trigger: GTGATGCTGTATGACTTCCAAGACAGAAAATTCCAG...TGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAGGGAAAATTAAGACATaGAAGCAGTGCTGGTCTACT | + |
Preference number: 5 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLGKIKT*KQCWST Trigger: AGTAGACCAGCACTGCTTCAATGTCTTAATTTTCCC...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTCTCTTCTTGTCCCTTTaGAGCGTCTTCCCAACCTCA | + |
Preference number: 5 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLLFLSL*SVFPTS Trigger: TGAGGTTGGGAAGACGCTCAAAAGGGACAAGAAGAG...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGTTGAAGTACTTATCTaGCTTTCTCGGTGCAAGAGC | + |
Preference number: 5 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLVEVLI*LSRCKS Trigger: GCTCTTGCACCGAGAAAGCAAGATAAGTACTTCAAC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS TCA 90 bp | TTGTTAAGATGGACATATGGGCAACTGTGTACCACGAACCCGTGTTaGCCATTAGGACATCATCATCGATGTTTATCAAAGCCTTCACAG | + |
Preference number: 5 (lower is better) Translates to: LLRWTYGQLCTTNPC*PLGHHHRCLSKPSQ Trigger: CTGTGAAGGCTTTGATAAACATCGATGATGATGTCCTAATGGTCAACACGGGTTCGTGGTACACAGTTGCCCATATGTCCATCTTAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTGGGGCGGACATTTTaGTTGAAGTACTTATCTTGC | + |
Preference number: 5 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRLGRTF*LKYLSC Trigger: GCAAGATAAGTACTTCAACAAAAATGTCCGCCCCAG...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS TCA 90 bp | CTTTATCAGGAAATTATTGATCCTGTCCTCCCTAGAAGAGTCCTTTaGTCCAATGAAGCGGTAATAAAAATGGGTGGCTGGCATCTGAAC | + |
Preference number: 5 (lower is better) Translates to: LYQEIIDPVLPRRVL*SNEAVIKMGGWHLN Trigger: GTTCAGATGCCAGCCACCCATTTTTATTACCGCTTCATTGGATCAAAGGACTCTTCTAGGGAGGACAGGATCAATAATTTCCTGATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031109.7 |
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CDS-3UTR CAA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTATTGCGATTGTGGTACTaGAGAAGATATAGCTATCTA | + |
Preference number: 5 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLLRLWY*RRYSYL Trigger: TAGATAGCTATATCTTCTCAAGTACCACAATCGCAA...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | TTTAAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTGGGAAAATTAAGACATaGAAGCAGTGCTGGTCTACT | + |
Preference number: 5 (lower is better) Translates to: FKKLKQVKCQLKDSVLSRGKIKT*KQCWST Trigger: AGTAGACCAGCACTGCTTCAATGTCTTAATTTTCCC...ACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | TGTCCTCTTTCCAACAATGTTTGGCCTAAACAGAAGGGAGGGATTATCATGCTTGGGAAAATTAAGACATaGAAGCAGTGCTGGTCTACT | + |
Preference number: 5 (lower is better) Translates to: CPLSNNVWPKQKGGIIMLGKIKT*KQCWST Trigger: AGTAGACCAGCACTGCTTCAATGTCTTAATTTTCCC...AAGCATGATAATCCCTCCCTTCTGTTTAGGCCAAACATTGTTGGAAAGAGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS-3UTR CAA 90 bp | GCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTCACTAGCAAGACTTCGAGATTaGTCCTGGAAAATAAGTTTA | + |
Preference number: 5 (lower is better) Translates to: AQAGKMPVKRQCAQPSSLARLRD*SWKISL Trigger: TAAACTTATTTTCCAGGACAAATCTCGAAGTCTTGC...TAGTGAAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTGGGCGGACATTTTTGTaGAAGTACTTATCTTGCTTT | + |
Preference number: 5 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLGRTFL*KYLSCF Trigger: AAAGCAAGATAAGTACTTCAACAAAAATGTCCGCCC...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | TCAGCCGTCTTCACTAGAGTTCTCTTAGGTTGCTTTTATCCTGTTTCTCTTCTTCTGGGGCGGACATTTTaGTTGAAGTACTTATCTTGC | + |
Preference number: 5 (lower is better) Translates to: SAVFTRVLLGCFYPVSLLLGRTF*LKYLSC Trigger: GCAAGATAAGTACTTCAACAAAAATGTCCGCCCCAG...AAGAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS-3UTR CAA 90 bp | AAGAAGCTCAAGCAGGTAAAATGCCAGTTAAAAGACAGTGTGCTCAGCCGTCTTTTGCGATTGTGGTACTaGAGAAGATATAGCTATCTA | + |
Preference number: 5 (lower is better) Translates to: KKLKQVKCQLKDSVLSRLLRLWY*RRYSYL Trigger: TAGATAGCTATATCTTCTCAAGTACCACAATCGCAA...AAGACGGCTGAGCACACTGTCTTTTAACTGGCATTTTACCTGCTTGAGCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS TCA 90 bp | AAGGCTTATTTTACTGGTATTTATCCAAGCATAAAGAGGCAAAGTTaGGGCCCTTTGTTCCTGTTTCCTAACTGTCTCTGGCAGAATATG | + |
Preference number: 5 (lower is better) Translates to: KAYFTGIYPSIKRQS*GPLFLFPNCLWQNM Trigger: CATATTCTGCCAGAGACAGTTAGGAAACAGGAACAAAGGGCCTCAACTTTGCCTCTTTATGCTTGGATAAATACCAGTAAAATAAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 90 bp | TCCTTCTCTTCTTGTTGTATTCCACATACAAAGATTTTCGAAGTGTaGCCACTTGTTAAGATGGACATATGGGCAACTGTGTACCACGAA | + |
Preference number: 5 (lower is better) Translates to: SFSSCCIPHTKIFEV*PLVKMDIWATVYHE Trigger: TTCGTGGTACACAGTTGCCCATATGTCCATCTTAACAAGTGGTCACACTTCGAAAATCTTTGTATGTGGAATACAACAAGAAGAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 90 bp | TATCTATTAATATACTTTCCAAAATATCTTGATACTTCAGGGTACTaGAAGCCAACTCATAGGACAAGCGCTGGAAAGATTCATCCTCGG | + |
Preference number: 5 (lower is better) Translates to: YLLIYFPKYLDTSGY*KPTHRTSAGKIHPR Trigger: CCGAGGATGAATCTTTCCAGCGCTTGTCCTATGAGTTGGCTTTCAGTACCCTGAAGTATCAAGATATTTTGGAAAGTATATTAATAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | TCACCAGTGGGGTCGATAAAGGCTTGCTGGGCTTTCTaGCTTGGGAGGAAGTGCCGGCTTGAGACACAGTCT | + |
Preference number: 6 (lower is better) Translates to: SPVGSIKACWAF*LGRKCRLETQS Trigger: AGACTGTGTCTCAAGCCGGCACTTCCTCCCAAGTCAGAAAGCCCAGCAAGCCTTTATCGACCCCACTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 90 bp | TCCCTTTTGAGCGTCTTCCCAACCTCAACCCCTTCCAGTAGACCTTaGGCTGCTGCCCTGGCCAGAACGTCTTTCACTGACACTGTCTCA | + |
Preference number: 6 (lower is better) Translates to: SLLSVFPTSTPSSRP*AAALARTSFTDTVS Trigger: TGAGACAGTGTCAGTGAAAGACGTTCTGGCCAGGGCAGCAGCCAAAGGTCTACTGGAAGGGGTTGAGGTTGGGAAGACGCTCAAAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 72 bp | CACTTTGCCTTCTGGCCGCGCTCTCACAAAGTTCGTTaGCCTTTCTACCGGCCTGGAAAAATTCCTCACCAG | + |
Preference number: 6 (lower is better) Translates to: HFAFWPRSHKVR*PFYRPGKIPHQ Trigger: CTGGTGAGGAATTTTTCCAGGCCGGTAGAAAGGCCAACGAACTTTGTGAGAGCGCGGCCAGAAGGCAAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 72 bp | AGCGGTAATAAAAATGGGTGGCTGGCATCTGAACCCTaGGCCCCTGGGAACTCAATGGGAATATCACTGGCG | + |
Preference number: 6 (lower is better) Translates to: SGNKNGWLASEP*APGNSMGISLA Trigger: CGCCAGTGATATTCCCATTGAGTTCCCAGGGGCCCAGGGTTCAGATGCCAGCCACCCATTTTTATTACCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 72 bp | CTGGAAAAATTCCTCACCAGTGGGGTCGATAAAGGCTaGCTGGGCTTTCTGACTTGGGAGGAAGTGCCGGCT | + |
Preference number: 6 (lower is better) Translates to: LEKFLTSGVDKG*LGFLTWEEVPA Trigger: AGCCGGCACTTCCTCCCAAGTCAGAAAGCCCAGCAAGCCTTTATCGACCCCACTGGTGAGGAATTTTTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 90 bp | TCAAAGGAATCACTTTGCCTTCTGGCCGCGCTCTCACAAAGTTCGTaGGCCTTTCTACCGGCCTGGAAAAATTCCTCACCAGTGGGGTCG | + |
Preference number: 6 (lower is better) Translates to: SKESLCLLAALSQSS*AFLPAWKNSSPVGS Trigger: CGACCCCACTGGTGAGGAATTTTTCCAGGCCGGTAGAAAGGCCAACGAACTTTGTGAGAGCGCGGCCAGAAGGCAAAGTGATTCCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 72 bp | CGGAGTCTGGGTAGCTGGGTTTTTCTAGGACGACGGTaGAAGAGTTTGTATTGGCGACTACATCCCCCGACA | + |
Preference number: 6 (lower is better) Translates to: RSLGSWVFLGRR*KSLYWRLHPPT Trigger: TGTCGGGGGATGTAGTCGCCAATACAAACTCTTCAACCGTCGTCCTAGAAAAACCCAGCTACCCAGACTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 72 bp | TCACTTTGCCTTCTGGCCGCGCTCTCACAAAGTTCGTaGGCCTTTCTACCGGCCTGGAAAAATTCCTCACCA | + |
Preference number: 6 (lower is better) Translates to: SLCLLAALSQSS*AFLPAWKNSSP Trigger: TGGTGAGGAATTTTTCCAGGCCGGTAGAAAGGCCAACGAACTTTGTGAGAGCGCGGCCAGAAGGCAAAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS GCA 72 bp | CGACCTTTGGATCCGAATACCCTGAAAAATGTTCGCTaGCGTAACGTACACGGAGTCTGGGTAGCTGGGTTT | + |
Preference number: 6 (lower is better) Translates to: RPLDPNTLKNVR*RNVHGVWVAGF Trigger: AAACCCAGCTACCCAGACTCCGTGTACGTTACGGCAGCGAACATTTTTCAGGGTATTCGGATCCAAAGGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 72 bp | CAGGGAAGCGAGTTGGGAGATCTCCTCCATGTTTTCTaGGTCAAAAAGGTCCCTTTCACTCGTTGGGTCCAG | + |
Preference number: 6 (lower is better) Translates to: QGSELGDLLHVF*VKKVPFTRWVQ Trigger: CTGGACCCAACGAGTGAAAGGGACCTTTTTGACCAAGAAAACATGGAGGAGATCTCCCAACTCGCTTCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | CTGGCAGAATATGGTAAATCGAGAGGGCGTCGTGTTTaGTTCGACATCTCGCCAAGGCTGCAGCCAATTTTG | + |
Preference number: 6 (lower is better) Translates to: LAEYGKSRGRRV*FDISPRLQPIL Trigger: CAAAATTGGCTGCAGCCTTGGCGAGATGTCGAATCAAACACGACGCCCTCTCGATTTACCATATTCTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 90 bp | ATCACTGGCGGCAGAACGATTTCAATTGGTTTCAAAGGAATCACTTaGCCTTCTGGCCGCGCTCTCACAAAGTTCGTTGGCCTTTCTACC | + |
Preference number: 6 (lower is better) Translates to: ITGGRTISIGFKGIT*PSGRALTKFVGLST Trigger: GGTAGAAAGGCCAACGAACTTTGTGAGAGCGCGGCCAGAAGGCAAAGTGATTCCTTTGAAACCAATTGAAATCGTTCTGCCGCCAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | AGGAGGGCTGCAGGGGTTCACTTCCGTAATTTATTATaGCTTTGTCTGGCGACCTTTGGATCCGAATACCCT | + |
Preference number: 6 (lower is better) Translates to: RRAAGVHFRNLL*LCLATFGSEYP Trigger: AGGGTATTCGGATCCAAAGGTCGCCAGACAAAGTCATAATAAATTACGGAAGTGAACCCCTGCAGCCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 72 bp | CGTTTAGAAGGTTCTCGACTTCTTGAACTTCTGGTATaGTCTCTTCATTCTCGGAAAGGATGCGGGGCTGGA | + |
Preference number: 6 (lower is better) Translates to: RLEGSRLLELLV*SLHSRKGCGAG Trigger: TCCAGCCCCGCATCCTTTCCGAGAATGAAGAGACCATACCAGAAGTTCAAGAAGTCGAGAACCTTCTAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 72 bp | CAATGGGAATATCACTGGCGGCAGAACGATTTCAATTaGTTTCAAAGGAATCACTTTGCCTTCTGGCCGCGC | + |
Preference number: 6 (lower is better) Translates to: QWEYHWRQNDFN*FQRNHFAFWPR Trigger: GCGCGGCCAGAAGGCAAAGTGATTCCTTTGAAACCAATTGAAATCGTTCTGCCGCCAGTGATATTCCCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 72 bp | GTAACTTCGTGTTCATTTAGAATGAATTCCACTGGGTaGCTGACACCGAGGCTGGAACAGCGAGGTAGCAAC | + |
Preference number: 6 (lower is better) Translates to: VTSCSFRMNSTG*LTPRLEQRGSN Trigger: GTTGCTACCTCGCTGTTCCAGCCTCGGTGTCAGCAACCCAGTGGAATTCATTCTAAATGAACACGAAGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202994.4 |
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CDS CAA 72 bp | TTATCTTCGTGTTCATTTAGAATGAATTCCACTGGGTaGCTGACACCGAGGCTGGAACAGCGAGGTAGCAAC | + |
Preference number: 6 (lower is better) Translates to: LSSCSFRMNSTG*LTPRLEQRGSN Trigger: GTTGCTACCTCGCTGTTCCAGCCTCGGTGTCAGCAACCCAGTGGAATTCATTCTAAATGAACACGAAGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS CAA 72 bp | CGGCTTGAGACACAGTCTTTGCTGGGGCGGACATTTTaGTTGAAGTACTTATCTTGCTTTCTCGGTGCAAGA | + |
Preference number: 6 (lower is better) Translates to: RLETQSLLGRTF*LKYLSCFLGAR Trigger: TCTTGCACCGAGAAAGCAAGATAAGTACTTCAACAAAAATGTCCGCCCCAGCAAAGACTGTGTCTCAAGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 90 bp | CAGGGGTTCACTTCCGTAATTTATTATGACTTTGTCTGGCGACCTTaGGATCCGAATACCCTGAAAAATGTTCGCTGCCGTAACGTACAC | + |
Preference number: 6 (lower is better) Translates to: QGFTSVIYYDFVWRP*DPNTLKNVRCRNVH Trigger: GTGTACGTTACGGCAGCGAACATTTTTCAGGGTATTCGGATCCAAAGGTCGCCAGACAAAGTCATAATAAATTACGGAAGTGAACCCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS GCA 72 bp | GAACTTCTGGTATGGTCTCTTCATTCTCGGAAAGGATaGGGGGCTGGAATTTTCTGTCTTGGAAGTCATACA | + |
Preference number: 6 (lower is better) Translates to: ELLVWSLHSRKG*GAGIFCLGSHT Trigger: TGTATGACTTCCAAGACAGAAAATTCCAGCCCCGCATCCTTTCCGAGAATGAAGAGACCATACCAGAAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 72 bp | CTTGAGACACAGTCTTTGCTGGGGCGGACATTTTTGTaGAAGTACTTATCTTGCTTTCTCGGTGCAAGAGCT | + |
Preference number: 6 (lower is better) Translates to: LETQSLLGRTFL*KYLSCFLGARA Trigger: AGCTCTTGCACCGAGAAAGCAAGATAAGTACTTCAACAAAAATGTCCGCCCCAGCAAAGACTGTGTCTCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | TGGACATATGGGCAACTGTGTACCACGAACCCGTGTTaGCCATTAGGACATCATCATCGATGTTTATCAAAG | + |
Preference number: 6 (lower is better) Translates to: WTYGQLCTTNPC*PLGHHHRCLSK Trigger: CTTTGATAAACATCGATGATGATGTCCTAATGGTCAACACGGGTTCGTGGTACACAGTTGCCCATATGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | AGGAGGACTGAGTCTGTAAGGTTGCATTTTAACCCCTaGGCTTTGATATTCCAGTGCTTTCTCAACAACGTC | + |
Preference number: 6 (lower is better) Translates to: RRTESVRLHFNP*ALIFQCFLNNV Trigger: GACGTTGTTGAGAAAGCACTGGAATATCAAAGCTCAGGGGTTAAAATGCAACCTTACAGACTCAGTCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 90 bp | CTTGTTAAGATGGACATATGGGCAACTGTGTACCACGAACCCGTGTaGACCATTAGGACATCATCATCGATGTTTATCAAAGCCTTCACA | + |
Preference number: 6 (lower is better) Translates to: LVKMDIWATVYHEPV*TIRTSSSMFIKAFT Trigger: TGTGAAGGCTTTGATAAACATCGATGATGATGTCCTAATGGTCAACACGGGTTCGTGGTACACAGTTGCCCATATGTCCATCTTAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | GAAATTATTGATCCTGTCCTCCCTAGAAGAGTCCTTTaGTCCAATGAAGCGGTAATAAAAATGGGTGGCTGG | + |
Preference number: 6 (lower is better) Translates to: EIIDPVLPRRVL*SNEAVIKMGGW Trigger: CCAGCCACCCATTTTTATTACCGCTTCATTGGATCAAAGGACTCTTCTAGGGAGGACAGGATCAATAATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031109.7 |
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CDS CAA 72 bp | ATGGACATATGGGCAACTGTGTACCACGAACCCGTGTaGACCATTAGGACATCATCATCGATGTTTATCAAA | + |
Preference number: 6 (lower is better) Translates to: MDIWATVYHEPV*TIRTSSSMFIK Trigger: TTTGATAAACATCGATGATGATGTCCTAATGGTCAACACGGGTTCGTGGTACACAGTTGCCCATATGTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CAA 90 bp | CTTCTTGTTGTATTCCACATACAAAGATTTTCGAAGTGTGACCACTaGTTAAGATGGACATATGGGCAACTGTGTACCACGAACCCGTGT | + |
Preference number: 6 (lower is better) Translates to: LLVVFHIQRFSKCDH*LRWTYGQLCTTNPC Trigger: ACACGGGTTCGTGGTACACAGTTGCCCATATGTCCATCTTAACAAGTGGTCACACTTCGAAAATCTTTGTATGTGGAATACAACAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | TTTGTCTTAAAGCCGTTTAGAAGGTTCTCGACTTCTTaGACTTCTGGTATGGTCTCTTCATTCTCGGAAAGG | + |
Preference number: 6 (lower is better) Translates to: FVLKPFRRFSTS*TSGMVSSFSER Trigger: CCTTTCCGAGAATGAAGAGACCATACCAGAAGTTCAAGAAGTCGAGAACCTTCTAAACGGCTTTAAGACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | TTTACTGGTATTTATCCAAGCATAAAGAGGCAAAGTTaGGGCCCTTTGTTCCTGTTTCCTAACTGTCTCTGG | + |
Preference number: 6 (lower is better) Translates to: FTGIYPSIKRQS*GPLFLFPNCLW Trigger: CCAGAGACAGTTAGGAAACAGGAACAAAGGGCCTCAACTTTGCCTCTTTATGCTTGGATAAATACCAGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | AATTTCATTGCGTGTGTTAGCTGTTCAAACTGCTGCTaGACCAAAGTCTCGAGTTTATCTTTCGGTAGACCA | + |
Preference number: 6 (lower is better) Translates to: NFIACVSCSNCC*TKVSSLSFGRP Trigger: TGGTCTACCGAAAGATAAACTCGAGACTTTGGTTCAGCAGCAGTTTGAACAGCTAACACACGCAATGAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 |
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CDS TCA 72 bp | AGAGTCCTAAAGAAGAGCAGAATCTCTTTGATCCAATaGAGCGGTAATAAAAATGGGTGGCTGGCATCTGAA | + |
Preference number: 6 (lower is better) Translates to: RVLKKSRISLIQ*SGNKNGWLASE Trigger: TTCAGATGCCAGCCACCCATTTTTATTACCGCTTCATTGGATCAAAGAGATTCTGCTCTTCTTTAGGACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201100.4 |
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CDS GCA 72 bp | GACATTTTTGTTGAAGTACTTATCTTGCTTTCTCGGTaGAAGAGCTCGGAGATTTTCATTTGGACGTTGCTG | + |
Preference number: 6 (lower is better) Translates to: DIFVEVLILLSR*KSSEIFIWTLL Trigger: CAGCAACGTCCAAATGAAAATCTCCGAGCTCTTGCACCGAGAAAGCAAGATAAGTACTTCAACAAAAATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 72 bp | CAGGGGTTCACTTCCGTAATTTATTATGACTTTGTCTaGCGACCTTTGGATCCGAATACCCTGAAAAATGTT | + |
Preference number: 6 (lower is better) Translates to: QGFTSVIYYDFV*RPLDPNTLKNV Trigger: AACATTTTTCAGGGTATTCGGATCCAAAGGTCGCCAGACAAAGTCATAATAAATTACGGAAGTGAACCCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS CCA 72 bp | ACATCATCATCGATGTTTATCAAAGCCTTCACAGAGTaGACGGCAAGACTTCGAGATTTGTCCTGGAAAATA | + |
Preference number: 6 (lower is better) Translates to: TSSSMFIKAFTE*TARLRDLSWKI Trigger: TATTTTCCAGGACAAATCTCGAAGTCTTGCCGTCCACTCTGTGAAGGCTTTGATAAACATCGATGATGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |
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CDS TCA 72 bp | ATATACTTTCCAAAATATCTTGATACTTCAGGGTACTaGAAGCCAACTCATAGGACAAGCGCTGGAAAGATT | + |
Preference number: 6 (lower is better) Translates to: IYFPKYLDTSGY*KPTHRTSAGKI Trigger: AATCTTTCCAGCGCTTGTCCTATGAGTTGGCTTTCAGTACCCTGAAGTATCAAGATATTTTGGAAAGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031109.7 ENSMUST00000201100.4 ENSMUST00000202994.4 |