Pregenerated sensors for NSUN6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026707Ensembl transcript IDs: ENSMUST00000028034.15, ENSMUST00000076435.9, ENSMUST00000114713.2, ENSMUST00000114715.8, ENSMUST00000195749.6
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTGATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATaGATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCC | + |
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Preference number: 1 (lower is better) Translates to: RLIMLSYPPLPQNHV*MLLLPIPGKPLASS Trigger: GGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATCAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR GCA 90 bp | ATATCTAAGCTCATGCTGATGCTGAGCACTGACAAAGGCAGGGCCTaGTCCACTCCCATTTTTCTCCAGAAGAGCTGCCCAATATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ISKLMLMLSTDKGRA*STPIFLQKSCPICP Trigger: TGGGCATATTGGGCAGCTCTTCTGGAGAAAAATGGGAGTGGAGCAGGCCCTGCCTTTGTCAGTGCTCAGCATCAGCATGAGCTTAGATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR GCA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATaGCATCACTCCGTTGGCTTGACAACACTTCTGTGTAAGAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: DPREAISIILFPEQP*HHSVGLTTLLCKKK Trigger: CTTTTTCTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR CCA 90 bp | CCCCAGATGACCTGTTCTACCTCTGTTCAATTTTACTACTGGCAGTaGAGCTGCTGGGAACAGGAAGGCATTATAGATAGTGATTCATAT | + |
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Preference number: 1 (lower is better) Translates to: PQMTCSTSVQFYYWQ*SCWEQEGIIDSDSY Trigger: ATATGAATCACTATCTATAATGCCTTCCTGTTCCCAGCAGCTCCACTGCCAGTAGTAAAATTGAACAGAGGTAGAACAGGTCATCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR GCA 90 bp | ATGACCTGTTCTACCTCTGTTCAATTTTACTACTGGCAGTGGAGCTaGTGGGAACAGGAAGGCATTATAGATAGTGATTCATATAGACAA | + |
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Preference number: 1 (lower is better) Translates to: MTCSTSVQFYYWQWS*WEQEGIIDSDSYRQ Trigger: TTGTCTATATGAATCACTATCTATAATGCCTTCCTGTTCCCAGCAGCTCCACTGCCAGTAGTAAAATTGAACAGAGGTAGAACAGGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR TCA 90 bp | CTTGTTCAAGGCTGTATTCTACTCAGCGCTACCAACATCCAAATATaGCTTACAACTAATTGTATATCAGTGTGGCTTGAACAAATAGAA | + |
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Preference number: 1 (lower is better) Translates to: LVQGCILLSATNIQI*LTTNCISVWLEQIE Trigger: TTCTATTTGTTCAAGCCACACTGATATACAATTAGTTGTAAGTCATATTTGGATGTTGGTAGCGCTGAGTAGAATACAGCCTTGAACAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR TCA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTATCACTCCGTTGGCTTaGCAACACTTCTGTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: HVCMLLLPIPGKPLASSCITPLA*QHFCVR Trigger: TCTTACACAGAAGTGTTGTCAAGCCAACGGAGTGAT...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR TCA 90 bp | AAAATATCTAAGCTCATGCTGATGCTGAGCACTGACAAAGGCAGGGCCTGCTCCAAGGCCACGCCAATGTaGCACTGTTCAGAATGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KISKLMLMLSTDKGRACSKATPM*HCSECG Trigger: TCCACATTCTGAACAGTGTCACATTGGCGTGGCCTT...GGAGCAGGCCCTGCCTTTGTCAGTGCTCAGCATCAGCATGAGCTTAGATATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR TCA 90 bp | AACTCTAACATAATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTGGCTCTACAAACCTGAGGATCTaGGATCAAGCTTCAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: NSNIITSGTAPGDGSPGSTNLRI*DQASEP Trigger: GGGTTCTGAAGCTTGATCTCAGATCCTCAGGTTTGT...AGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR CCA 90 bp | CATGGTTCAGCAGTCACTAGAAACACCATTGGAAACGAGAGCACACCATTAGCAAAACGTAGGGCCTCTTaGCAGGTCAGCAATGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: HGSAVTRNTIGNESTPLAKRRAS*QVSNAL Trigger: GAGTGCATTGCTGACCTGCCAAGAGGCCCTACGTTT...TGCTAATGGTGTGCTCTCGTTTCCAATGGTGTTTCTAGTGACTGCTGAACCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR GCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATAAGAACCACGTATGCATaGTGCTCCTTCCGATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TWSSDFTMCSTHILSTEIRTTYA*CSFRSQ Trigger: CTGGGATCGGAAGGAGCAGCATGCATACGTGGTTCT...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR CCA 90 bp | CCAATATGCCCAGTATATCCAGTACTGACACTGTCCCCAGATGACCTGTTCTACGATCAGTCACTCACCTaGGCTTTTGCTTTGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: PICPVYPVLTLSPDDLFYDQSLT*AFALLC Trigger: GCAAAGCAAAGCAAAAGCCCAGGTGAGTGACTGATC...GTAGAACAGGTCATCTGGGGACAGTGTCAGTACTGGATATACTGGGCATATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATACATCATCCTGTTTCCTaGGCAACCATGCCATCACTC | + |
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Preference number: 2 (lower is better) Translates to: TWSSDFTMCSTHILSTEIHHPVS*ATMPSL Trigger: GAGTGATGGCATGGTTGCTCAGGAAACAGGATGATG...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR GCA 90 bp | TGTAGCCATTTGCAAGCTTGTTTTGTCTTAGAGCCTGACAGCCTAACTATCTGTCCTGGGCTTTTGCTTTaGTTTGCACTGCTAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: CSHLQACFVLEPDSLTICPGLLL*FALLRA Trigger: GGCCCTTAGCAGTGCAAAGCAAAGCAAAAGCCCAGG...ACAGATAGTTAGGCTGTCAGGCTCTAAGACAAAACAAGCTTGCAAATGGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTCAGCAGTCACTAGAAACACCATTGGAAACGAGAGCACACCATTAGCAGATCAGGTAACCCATTaGAGATATCTTTGCGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: HGSAVTRNTIGNESTPLADQVTH*RYLCGS Trigger: TGAGCCGCAAAGATATCTTCAATGGGTTACCTGATC...TGCTAATGGTGTGCTCTCGTTTCCAATGGTGTTTCTAGTGACTGCTGAACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATAGAACCACGTATGCATaGTGCTCCTTCCGATCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSSPSISLLFCMMSVPKDRTTYA*CSFRSQ Trigger: CTGGGATCGGAAGGAGCAGCATGCATACGTGGTTCT...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR CAA 90 bp | TTCCTCCCACAGAGTTCAGTGACATACTTCAGATCAGGTAACCCATaGAAGATATCTTTGCGGCTCAGTTCAGAAATTCCGTTTCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: FLPQSSVTYFRSGNP*KISLRLSSEIPFPR Trigger: TCTCGGAAACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAGTATGTCACTGAACTCTGTGGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR TCA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGATCACTCCGTTGGCTTaGCAACACTTCTGTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLITPLA*QHFCVR Trigger: TCTTACACAGAAGTGTTGTCAAGCCAACGGAGTGAT...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR TCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTCATCATCCTGTTTCCTaGGCAACCATGCCATCACTC | + |
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Preference number: 2 (lower is better) Translates to: HTLGENLPLIPLKWPLKIHHPVS*ATMPSL Trigger: GAGTGATGGCATGGTTGCTCAGGAAACAGGATGATG...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGGCATTATAGATAGTGATTCATATAGACAAACACTGCATCTGAGTGGCTACCCAATTACAGTGTaGTCAGTCACTCACCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: QEGIIDSDSYRQTLHLSGYPITV*SVTHLG Trigger: GCCCAGGTGAGTGACTGATCACACTGTAATTGGGTA...GCCACTCAGATGCAGTGTTTGTCTATATGAATCACTATCTATAATGCCTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCCACGCCAATGTGACACTGTTCAGAATGTGGACTCCGGAACCCTTCTATTCCATCAAATTCTTTaGCTCCTTTCTTACATTTGC | + |
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Preference number: 2 (lower is better) Translates to: ERPRQCDTVQNVDSGTLLFHQIL*LLSYIC Trigger: GCAAATGTAAGAAAGGAGCCAAAGAATTTGATGGAA...TAGAAGGGTTCCGGAGTCCACATTCTGAACAGTGTCACATTGGCGTGGCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR CAA 90 bp | AGGACCGTTCTTCATACCTTGGGGGAGAACCTTCCATTGATACCTTaGAAATGGCCTTTGAAAATTGACAGAAGGAATGATGGAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: RTVLHTLGENLPLIP*KWPLKIDRRNDGSK Trigger: CTTGCTTCCATCATTCCTTCTGTCAATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATGAAGAACGGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR TCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTACAAACCTGAGGATCTaGGATCAAGCTTCAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: HTLGENLPLIPLKWPLKITNLRI*DQASEP Trigger: GGGTTCTGAAGCTTGATCTCAGATCCTCAGGTTTGT...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR-3UTR TCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATACACCATCTTGGAAACTaGAAACAGTTTTTCATAACC | + |
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Preference number: 2 (lower is better) Translates to: TWSSDFTMCSTHILSTEIHHLGN*KQFFIT Trigger: GGTTATGAAAAACTGTTTTCAGTTTCCAAGATGGTG...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR CAA 90 bp | TATCAACCAAGCATTGTAAGAAGAAGGAAATCAGGTTGTAGCCATTaGCAAGCTTGTTTTGTCTTAGAGCCTGACAGCCTAACTATCTGT | + |
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Preference number: 2 (lower is better) Translates to: YQPSIVRRRKSGCSH*QACFVLEPDSLTIC Trigger: ACAGATAGTTAGGCTGTCAGGCTCTAAGACAAAACAAGCTTGCAAATGGCTACAACCTGATTTCCTTCTTCTTACAATGCTTGGTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR TCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTTTACTGTCCATGTCCTaGAAACTTACTGAAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: HTLGENLPLIPLKWPLKILLSMS*KLTEEA Trigger: AGCTTCTTCAGTAAGTTTTCAGGACATGGACAGTAA...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR CAA 90 bp | AGTTCAGTGACATACTTCAGATCAGGTAACCCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATTCCGTTTCCGAGAAATACTTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSVTYFRSGNPLKIS*RLSSEIPFPRNTLV Trigger: AACTAAAGTATTTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAGTATGTCACTGAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR CCA 90 bp | CCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAAAACTAAGCTACCACCATCTTaGAAACTGAAAACAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: PTYLSYDEVSVTVHVLKTKLPPS*KLKTVF Trigger: AAAAACTGTTTTCAGTTTCCAAGATGGTGGTAGCTT...AGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR GCA 72 bp | CTCATGCTGATGCTGAGCACTGACAAAGGCAGGGCCTaGTCCACTCCCATTTTTCTCCAGAAGAGCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: LMLMLSTDKGRA*STPIFLQKSCP Trigger: TGGGCAGCTCTTCTGGAGAAAAATGGGAGTGGAGCAGGCCCTGCCTTTGTCAGTGCTCAGCATCAGCATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR GCA 72 bp | ATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATaGATGCTGCTCCTTCCGATCCCAGGGAAGCCATTA | + |
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Preference number: 3 (lower is better) Translates to: MLSYPPLPQNHV*MLLLPIPGKPL Trigger: TAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR CCA 72 bp | TGCTTTGCACTGCTAAGGGCCAAACGTAGGGCCTCTTaGCAGGTCAGCAATGCACTCACCACTAGCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: CFALLRAKRRAS*QVSNALTTSFI Trigger: GATGAAGCTAGTGGTGAGTGCATTGCTGACCTGCCAAGAGGCCCTACGTTTGGCCCTTAGCAGTGCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR CCA 72 bp | AATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTaGCTCTCAGTAACTGCTTTTCTCCTCCTCACCAAG | + |
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Preference number: 3 (lower is better) Translates to: NNLWNSSWGWES*LSVTAFLLLTK Trigger: CTTGGTGAGGAGGAGAAAAGCAGTTACTGAGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR GCA 72 bp | TACAGTGTGATCAGTCACTCACCTGGGCTTTTGCTTTaGTTTGCACTGCTAAGGGCCAAACGTAGGGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: YSVISHSPGLLL*FALLRAKRRAS Trigger: AGAGGCCCTACGTTTGGCCCTTAGCAGTGCAAAGCAAAGCAAAAGCCCAGGTGAGTGACTGATCACACTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR TCA 72 bp | TGTTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTaGCAACACTTCTGTGTAAGAAAAAGCCCCACACAC | + |
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Preference number: 3 (lower is better) Translates to: CFLSNHAITPLA*QHFCVRKSPTH Trigger: GTGTGTGGGGCTTTTTCTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR TCA 72 bp | AGAAGAGCTGCCCAATATGCCCAGTATATCCAGTACTaGCACTGTCCCCAGATGACCTGTTCTACCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: RRAAQYAQYIQY*HCPQMTCSTSV Trigger: AACAGAGGTAGAACAGGTCATCTGGGGACAGTGTCAGTACTGGATATACTGGGCATATTGGGCAGCTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR CCA 72 bp | TTAGTGCATGCATGTCAGCAGTCAACCTCGGAGCAATaGTGCTCCACAGCTCTCCAAAACCAAGCTCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: LVHACQQSTSEQ*CSTALQNQAQK Trigger: TTTTTGAGCTTGGTTTTGGAGAGCTGTGGAGCACCATTGCTCCGAGGTTGACTGCTGACATGCATGCACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGTTCAGCAGTCACTAGAAACACCATTGGAAACGAGAGCACACCATTAGCACACTCACCTGGGCTTTaGCTTTGCTTTGCACTGCTA | + |
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Preference number: 3 (lower is better) Translates to: HGSAVTRNTIGNESTPLAHSPGL*LCFALL Trigger: TAGCAGTGCAAAGCAAAGCAAAAGCCCAGGTGAGTG...TGCTAATGGTGTGCTCTCGTTTCCAATGGTGTTTCTAGTGACTGCTGAACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGTTCAGCAGTCACTAGAAACACCATTGGAAACGAGAGCACACCATTAGCAGAAGCAGGCCCTCACTaGTTCAAGGCTGTATTCTAC | + |
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Preference number: 3 (lower is better) Translates to: HGSAVTRNTIGNESTPLAEAGPH*FKAVFY Trigger: GTAGAATACAGCCTTGAACAAGTGAGGGCCTGCTTC...TGCTAATGGTGTGCTCTCGTTTCCAATGGTGTTTCTAGTGACTGCTGAACCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR CAA 90 bp | CATGGTTCAGCAGTCACTAGAAACACCATTGGAAACGAGAGCACACCATTAGCAAGATCAGGTAACCCATaGAAGATATCTTTGCGGCTC | + |
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Preference number: 3 (lower is better) Translates to: HGSAVTRNTIGNESTPLARSGNP*KISLRL Trigger: GAGCCGCAAAGATATCTTCAATGGGTTACCTGATCT...TGCTAATGGTGTGCTCTCGTTTCCAATGGTGTTTCTAGTGACTGCTGAACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGCCACGCCAATGTGACACTGTTCAGAATGTGGACTCCGGAACCCTTCTACCACATCCTACTGCTTaGGTTTTTAATCTATTTACC | + |
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Preference number: 3 (lower is better) Translates to: ERPRQCDTVQNVDSGTLLPHPTA*VFNLFT Trigger: GGTAAATAGATTAAAAACCAAAGCAGTAGGATGTGG...TAGAAGGGTTCCGGAGTCCACATTCTGAACAGTGTCACATTGGCGTGGCCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR TCA 72 bp | AAGCTTTATTTAGAAGTGACCTGCGGCCTGGTGAAATaGCTCAGCAGGGAAAAAGGACTTGCAACACAAACC | + |
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Preference number: 3 (lower is better) Translates to: KLYLEVTCGLVK*LSREKGLATQT Trigger: GGTTTGTGTTGCAAGTCCTTTTTCCCTGCTGAGTCATTTCACCAGGCCGCAGGTCACTTCTAAATAAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| 3UTR CCA 72 bp | ACACTGCATCTGAGTGGCATGTTCCATAATTATCAGTaGGAGAGAACTTACAAGTACTGCAGAGTAGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: TLHLSGMFHNYQ*ERTYKYCRVAN Trigger: GTTGGCTACTCTGCAGTACTTGTAAGTTCTCTCCCACTGATAATTATGGAACATGCCACTCAGATGCAGTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR CCA 72 bp | ACCTGTTCTACCTCTGTTCAATTTTACTACTGGCAGTaGAGCTGCTGGGAACAGGAAGGCATTATAGATAGT | + |
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Preference number: 3 (lower is better) Translates to: TCSTSVQFYYWQ*SCWEQEGIIDS Trigger: ACTATCTATAATGCCTTCCTGTTCCCAGCAGCTCCACTGCCAGTAGTAAAATTGAACAGAGGTAGAACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR GCA 72 bp | TCTACCTCTGTTCAATTTTACTACTGGCAGTGGAGCTaGTGGGAACAGGAAGGCATTATAGATAGTGATTCA | + |
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Preference number: 3 (lower is better) Translates to: STSVQFYYWQWS*WEQEGIIDSDS Trigger: TGAATCACTATCTATAATGCCTTCCTGTTCCCAGCAGCTCCACTGCCAGTAGTAAAATTGAACAGAGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCACACCATTAGCAAGCAACTAAAGAGGGCACTCAAAGCAAGACATCACTGTACTGTTTTGAGCTTTTaGAACCACAGACAGGAATTT | + |
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Preference number: 3 (lower is better) Translates to: EHTISKQLKRALKARHHCTVLSF*NHRQEF Trigger: AAATTCCTGTCTGTGGTTCAAAAAGCTCAAAACAGT...ACAGTGATGTCTTGCTTTGAGTGCCCTCTTTAGTTGCTTGCTAATGGTGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| 3UTR CCA 72 bp | ACCTCTGTTCAATTTTACTACTGGCAGTGGAGCTGCTaGGAACAGGAAGGCATTATAGATAGTGATTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: TSVQFYYWQWSC*EQEGIIDSDSY Trigger: ATATGAATCACTATCTATAATGCCTTCCTGTTCCCAGCAGCTCCACTGCCAGTAGTAAAATTGAACAGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGCTTTTTGAACCACAGACAGGAATTTATTCCTCCCACAGAGTTCAGTGACCCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LSFLNHRQEFIPPTEFSDPLKIS*RLSSEI Trigger: AATTTCTGAACTGAGCCGCAAAGATATCTTCAATGG...GTCACTGAACTCTGTGGGAGGAATAAATTCCTGTCTGTGGTTCAAAAAGCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGCCATTTGCAAGCTTGTTTTGTCTTAGAGCCTGACAGCCTAACTATCTGTTGCCTTTTCACTGTTTaGAGCTTTTTGAACCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSHLQACFVLEPDSLTICCLFTV*SFLNHR Trigger: TCTGTGGTTCAAAAAGCTCAAAACAGTGAAAAGGCA...ACAGATAGTTAGGCTGTCAGGCTCTAAGACAAAACAAGCTTGCAAATGGCTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| 3UTR TCA 72 bp | TCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTaGAAACTTACTGAAGAAGCTACCACCATCTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SVMMRLVLLSMS*KLTEEATTILE Trigger: TTCCAAGATGGTGGTAGCTTCTTCAGTAAGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGGCATTATAGATAGTGATTCATATAGACAAACACTGCATCTGAGTGGCAGCCTAACTATCTGTTaGTTTAGGAGAATTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: QEGIIDSDSYRQTLHLSGSLTIC*FRRIDF Trigger: GAAGTCAATTCTCCTAAACAAACAGATAGTTAGGCT...GCCACTCAGATGCAGTGTTTGTCTATATGAATCACTATCTATAATGCCTTCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGTAAGGTCCAGTCATGGGGATaGGCAAGACATCCGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPEQPCHHSVGLTTLLCKVQSWG*ARHPGG Trigger: CCCTCCCGGATGTCTTGCTCATCCCCATGACTGGAC...CTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACTGCTTCTTGTCTGCTTaGAGCAGACACAGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPREAISIILFPEQPCHHCFLSA*SRHSLL Trigger: GAGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCA...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | GATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATGCTGCTCCTTGCTTCTTGTCTGCTTaGAGCAGACACAGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DYAFLSPTSPEPRMHAAPCFLSA*SRHSLL Trigger: GAGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCA...AGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTTGCATCGAAGCAAAATaGCCGGATAGAATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HVCMLLLPIPGKPLASSCCIEAK*PDRMKP Trigger: GGGCTTCATTCTATCCGGGCATTTTGCTTCGATGCA...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GAACCACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGCCAAGGTTATTGTaGATGTGCTGTAGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPRMHAAPSDPREAISIILPRLL*MCCRPA Trigger: TGCTGGTCTACAGCACATGCACAATAACCTTGGCAG...GATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATGCTGCTCCTAGGGCCCAGGCAACTTaGTCTTCATTTTCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DYAFLSPTSPEPRMHAAPRAQAT*SSFSAK Trigger: CTTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCT...AGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACTTCTCCTCCAATCTGTaGTTCCTGGGGTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPREAISIILFPEQPCHHFSSNL*FLGLKL Trigger: CAGCTTCAACCCCAGGAACCACAGATTGGAGGAGAA...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTTCATGTCTTCCCTTCTaGCCTCTCCAAGAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVCMLLLPIPGKPLASSCSCLPF*PLQENQ Trigger: CTGATTCTCTTGGAGAGGCCAGAAGGGAAGACATGA...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGCATTGCCACACTGTaGGCCAACAATCACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILFPEQPCHHSVGLTTLLCIATL*ANNHFT Trigger: GGTGAAGTGATTGTTGGCGCACAGTGTGGCAATGCA...CAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATGCTGCTCCTGTCCTGCATCAGTGCTaGAGTATGTGTAGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DYAFLSPTSPEPRMHAAPVLHQC*SMCSFA Trigger: GGCAAAACTACACATACTGCAGCACTGATGCAGGAC...AGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GAACCACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTTCAGGAGTTGAACTaGCACATGAAGGAGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EPRMHAAPSDPREAISIILQELN*HMKEFS Trigger: CGAAAACTCCTTCATGTGGCAGTTCAACTCCTGAAG...GATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACCTGCCAAGGTTATTGTaGATGTGCTGTAGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPREAISIILFPEQPCHHLPRLL*MCCRPA Trigger: TGCTGGTCTACAGCACATGCACAATAACCTTGGCAG...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CATGAGGCTGATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATTGCAGCTGCTTCAATTaGTCCAATGTCAGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HEADYAFLSPTSPEPRMHCSCFN*SNVRPA Trigger: AGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCA...ATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATCAGCCTCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGCAGCTGCTTCAATTaGTCCAATGTCAGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILFPEQPCHHSVGLTTLLCSCFN*SNVRPA Trigger: AGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCA...CAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTTCAAATCGCTGCAGCTaGTTCAATTGCTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HVCMLLLPIPGKPLASSCSNRCS*FNCSNV Trigger: GACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGA...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATGCTGCTCCTTCAGTGTCCATGTTCTaGAGTGGTACAACAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: DYAFLSPTSPEPRMHAAPSVSMF*SGTTDG Trigger: TCCGTCTGTTGTACCACTGCAGAACATGGACACTGA...AGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACTCAGTGTCCATGTTCTaGAGTGGTACAACAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: DPREAISIILFPEQPCHHSVSMF*SGTTDG Trigger: TCCGTCTGTTGTACCACTGCAGAACATGGACACTGA...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | GAACCACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCAGTACAAGCCATATTTaGCCTCTGTCCCATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EPRMHAAPSDPREAISIISTSHI*PLSHST Trigger: AGTGGAATGGGACAGAGGCCAAATATGGCTTGTACT...GATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | AACTCTAACATAATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTGGCTCTTTCTCCTCCAATCTGTaGTTCCTGGGGTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSNIITSGTAPGDGSPGSFSSNL*FLGLKL Trigger: CAGCTTCAACCCCAGGAACCACAGATTGGAGGAGAA...AGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| 3UTR CAA 72 bp | CCCAATTACAGTGTGATCAGTCACTCACCTGGGCTTTaGCTTTGCTTTGCACTGCTAAGGGCCAAACGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNYSVISHSPGL*LCFALLRAKRR Trigger: CCTACGTTTGGCCCTTAGCAGTGCAAAGCAAAGCAAAAGCCCAGGTGAGTGACTGATCACACTGTAATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR TCA 90 bp | CCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAAAACTGTCCAGTCATGGGGATaGGCAAGACATCCGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTYLSYDEVSVTVHVLKTVQSWG*ARHPGG Trigger: CCCTCCCGGATGTCTTGCTCATCCCCATGACTGGAC...AGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | TTCACTGTTTTGAGCTTTTTGAACCACAGACAGGAATTTATTCCTCCCACAGAGGTCCAGTCATGGGGATaGGCAAGACATCCGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTVLSFLNHRQEFIPPTEVQSWG*ARHPGG Trigger: CCCTCCCGGATGTCTTGCTCATCCCCATGACTGGAC...CTCTGTGGGAGGAATAAATTCCTGTCTGTGGTTCAAAAAGCTCAAAACAGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR TCA 90 bp | GAACCACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCAATGCCCGGATAGAATaGAGCCCTAATAATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPRMHAAPSDPREAISIINARIE*SPNNEA Trigger: TGCTTCATTATTAGGGCTTCATTCTATCCGGGCATT...GATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTAATGCCCGGATAGAATaGAGCCCTAATAATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVCMLLLPIPGKPLASSCNARIE*SPNNEA Trigger: TGCTTCATTATTAGGGCTTCATTCTATCCGGGCATT...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGCTGGATTCACCAAACTaGTTCTGGAGCTCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILFPEQPCHHSVGLTTLLLDSPN*FWSSSS Trigger: GCTTGAAGAGCTCCAGAAGCAGTTTGGTGAATCCAG...CAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATGCTGCTCCTCTTAAGTGCCTTTGTTaGATCGAAGCAAAATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DYAFLSPTSPEPRMHAAPLKCLC*IEAKCP Trigger: CGGGCATTTTGCTTCGATGCAACAAAGGCACTTAAG...AGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACAGTACAAGCCATATTTaGCCTCTGTCCCATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DPREAISIILFPEQPCHHSTSHI*PLSHST Trigger: AGTGGAATGGGACAGAGGCCAAATATGGCTTGTACT...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGTAAGTGCATCGAAGCAAAATaGCCGGATAGAATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPEQPCHHSVGLTTLLCKCIEAK*PDRMKP Trigger: GGGCTTCATTCTATCCGGGCATTTTGCTTCGATGCA...CTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | GAACCACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCAGTATCAAGCTTAAGTaGCTTTGTTGCATCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPRMHAAPSDPREAISIISIKLK*LCCIEA Trigger: TGCTTCGATGCAACAAAGGCACTTAAGCTTGATACT...GATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGCTTCAGGAGTTGAACTaGCACATGAAGGAGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILFPEQPCHHSVGLTTLLLQELN*HMKEFS Trigger: CGAAAACTCCTTCATGTGGCAGTTCAACTCCTGAAG...CAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | AACTCTAACATAATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTGGCTCTTCAAATCGCTGCAGCTaGTTCAATTGCTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NSNIITSGTAPGDGSPGSSNRCS*FNCSNV Trigger: GACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGA...AGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CAGACCCCCACAGGCAACTCCTTTCCTTTCATAAAGCATGAGGCTGATTATGCTTCAGTGTCCATGTTCTaGAGTGGTACAACAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTPTGNSFPFIKHEADYASVSMF*SGTTDG Trigger: TCCGTCTGTTGTACCACTGCAGAACATGGACACTGA...AGCATAATCAGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | CCAATATGCCCAGTATATCCAGTACTGACACTGTCCCCAGATGACCTGTTCTACTCACCAAACTGCTTCTaGAGCTCTTCAAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PICPVYPVLTLSPDDLFYSPNCF*SSSSSR Trigger: TCTGCTGCTTGAAGAGCTCCAGAAGCAGTTTGGTGA...GTAGAACAGGTCATCTGGGGACAGTGTCAGTACTGGATATACTGGGCATATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGTAAGTCACCAAACTGCTTCTaGAGCTCTTCAAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPEQPCHHSVGLTTLLCKSPNCF*SSSSSR Trigger: TCTGCTGCTTGAAGAGCTCCAGAAGCAGTTTGGTGA...CTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGTAAGGATCAGGTAACCCATTaGAGATATCTTTGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPEQPCHHSVGLTTLLCKDQVTH*RYLCGS Trigger: TGAGCCGCAAAGATATCTTCAATGGGTTACCTGATC...CTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CATGAGGCTGATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATCTTGTCCTGCATCAGTaGTGCAGTATGTGTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HEADYAFLSPTSPEPRMHLVLHQ*CSMCSF Trigger: AAAACTACACATACTGCAGCACTGATGCAGGACAAG...ATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATCAGCCTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CAGACCCCCACAGGCAACTCCTTTCCTTTCATAAAGCATGAGGCTGATTATGCTCTTAAGTGCCTTTGTTaGATCGAAGCAAAATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTPTGNSFPFIKHEADYALKCLC*IEAKCP Trigger: CGGGCATTTTGCTTCGATGCAACAAAGGCACTTAAG...AGCATAATCAGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CAGACCCCCACAGGCAACTCCTTTCCTTTCATAAAGCATGAGGCTGATTATGCTCTTCAGGAGTTGAACTaGCACATGAAGGAGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QTPTGNSFPFIKHEADYALQELN*HMKEFS Trigger: CGAAAACTCCTTCATGTGGCAGTTCAACTCCTGAAG...AGCATAATCAGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAGGGCCCAGGCAACTTaGTCTTCATTTTCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLRAQAT*SSFSAK Trigger: CTTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCT...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | CATGGTTCAGCAGTCACTAGAAACACCATTGGAAACGAGAGCACACCATTAGCACCAGCTTTCATAACTTaGTCCAGTCATGGGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HGSAVTRNTIGNESTPLAPAFIT*SSHGDE Trigger: CTCATCCCCATGACTGGACCAAGTTATGAAAGCTGG...TGCTAATGGTGTGCTCTCGTTTCCAATGGTGTTTCTAGTGACTGCTGAACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATTGCTTCTTGTCTGCTTaGAGCAGACACAGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDCFLSA*SRHSLL Trigger: GAGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCA...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATAAATGCGTATTCACTCTaGCAGTTGTCATCGACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWSSDFTMCSTHILSTEINAYSL*QLSSTE Trigger: CTCCGTCGATGACAACTGTCAGAGTGAATACGCATT...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGCTGGATTCACCAAACTaGTTCTGGAGCTCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLLDSPN*FWSSSS Trigger: GCTTGAAGAGCTCCAGAAGCAGTTTGGTGAATCCAG...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTCAATATTTTGTCCAATaGTATTACTTCTCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HVCMLLLPIPGKPLASSCQYFVQ*YYFSLV Trigger: GACAAGGGAGAAGTAATAGCATTGGACAAAATATTG...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGAGTATCAAGCTTAAGTaGCTTTGTTGCATCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILFPEQPCHHSVGLTTLLSIKLK*LCCIEA Trigger: TGCTTCGATGCAACAAAGGCACTTAAGCTTGATACT...CAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATATCACCAAACTGCTTCTaGAGCTCTTCAAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TWSSDFTMCSTHILSTEISPNCF*SSSSSR Trigger: TCTGCTGCTTGAAGAGCTCCAGAAGCAGTTTGGTGA...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATATCATGTCTTCCCTTCTaGCCTCTCCAAGAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TWSSDFTMCSTHILSTEISCLPF*PLQENQ Trigger: CTGATTCTCTTGGAGAGGCCAGAAGGGAAGACATGA...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | TTTGCGGCTCAGTTCAGAAATTCCGTTTCCGAGAAATACTTTAGTTCCATCAAATGCTTCTTGTCTGCTTaGAGCAGACACAGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FAAQFRNSVSEKYFSSIKCFLSA*SRHSLL Trigger: GAGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCA...TTTGATGGAACTAAAGTATTTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR TCA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGGATCAGGTAACCCATTaGAGATATCTTTGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLDQVTH*RYLCGS Trigger: TGAGCCGCAAAGATATCTTCAATGGGTTACCTGATC...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATAGATCAGGTAACCCATTaGAGATATCTTTGCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TWSSDFTMCSTHILSTEIDQVTH*RYLCGS Trigger: TGAGCCGCAAAGATATCTTCAATGGGTTACCTGATC...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGCTTTTTGAACCACAGACAGGAATTTATTCCTCCCACAGAGTTCAGTGACCTGGATTCACCAAACTaGTTCTGGAGCTCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFLNHRQEFIPPTEFSDLDSPN*FWSSSS Trigger: GCTTGAAGAGCTCCAGAAGCAGTTTGGTGAATCCAG...GTCACTGAACTCTGTGGGAGGAATAAATTCCTGTCTGTGGTTCAAAAAGCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACCAATATTTTGTCCAATaGTATTACTTCTCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DPREAISIILFPEQPCHHQYFVQ*YYFSLV Trigger: GACAAGGGAGAAGTAATAGCATTGGACAAAATATTG...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATAGGGCCCAGGCAACTTaGTCTTCATTTTCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDRAQAT*SSFSAK Trigger: CTTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCT...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATTTCTCCTCCAATCTGTaGTTCCTGGGGTTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDFSSNL*FLGLKL Trigger: CAGCTTCAACCCCAGGAACCACAGATTGGAGGAGAA...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR TCA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAATGCCCGGATAGAATaGAGCCCTAATAATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLNARIE*SPNNEA Trigger: TGCTTCATTATTAGGGCTTCATTCTATCCGGGCATT...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATCTGGATTCACCAAACTaGTTCTGGAGCTCTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDLDSPN*FWSSSS Trigger: GCTTGAAGAGCTCCAGAAGCAGTTTGGTGAATCCAG...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTGTCCTGCATCAGTGCTaGAGTATGTGTAGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTLGENLPLIPLKWPLKIVLHQC*SMCSFA Trigger: GGCAAAACTACACATACTGCAGCACTGATGCAGGAC...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | CCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAAAACTGTCCTGCATCAGTGCTaGAGTATGTGTAGTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTYLSYDEVSVTVHVLKTVLHQC*SMCSFA Trigger: GGCAAAACTACACATACTGCAGCACTGATGCAGGAC...AGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGCTTGTCCTGCATCAGTaGTGCAGTATGTGTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLLVLHQ*CSMCSF Trigger: AAAACTACACATACTGCAGCACTGATGCAGGACAAG...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| CDS-3UTR GCA 90 bp | CATGAGGCTGATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATCAATATTTTGTCCAATaGTATTACTTCTCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HEADYAFLSPTSPEPRMHQYFVQ*YYFSLV Trigger: GACAAGGGAGAAGTAATAGCATTGGACAAAATATTG...ATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATCAGCCTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATTGCATCGAAGCAAAATaGCCGGATAGAATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDCIEAK*PDRMKP Trigger: GGGCTTCATTCTATCCGGGCATTTTGCTTCGATGCA...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATCTGCCAAGGTTATTGTaGATGTGCTGTAGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDLPRLL*MCCRPA Trigger: TGCTGGTCTACAGCACATGCACAATAACCTTGGCAG...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| CDS-3UTR GCA 90 bp | CAGACCCCCACAGGCAACTCCTTTCCTTTCATAAAGCATGAGGCTGATTATGCTTTGCTCTTCATTTTCTaGCAAGGTTATTGTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QTPTGNSFPFIKHEADYALLFIF*QGYCAC Trigger: ACATGCACAATAACCTTGGCAGAAAATGAAGAGCAA...AGCATAATCAGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTTCACCAAACTGCTTCTaGAGCTCTTCAAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTLGENLPLIPLKWPLKISPNCF*SSSSSR Trigger: TCTGCTGCTTGAAGAGCTCCAGAAGCAGTTTGGTGA...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTTCATGTCTTCCCTTCTaGCCTCTCCAAGAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTLGENLPLIPLKWPLKISCLPF*PLQENQ Trigger: CTGATTCTCTTGGAGAGGCCAGAAGGGAAGACATGA...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| 3UTR CAA 72 bp | CAGAGTTCAGTGACATACTTCAGATCAGGTAACCCATaGAAGATATCTTTGCGGCTCAGTTCAGAAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QSSVTYFRSGNP*KISLRLSSEIP Trigger: CGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAGTATGTCACTGAACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR GCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTCTTAAGTGCCTTTGTTaGATCGAAGCAAAATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTLGENLPLIPLKWPLKILKCLC*IEAKCP Trigger: CGGGCATTTTGCTTCGATGCAACAAAGGCACTTAAG...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATTCAAATCGCTGCAGCTaGTTCAATTGCTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDSNRCS*FNCSNV Trigger: GACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGA...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | CCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAAAACTAGTACAAGCCATATTTaGCCTCTGTCCCATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PTYLSYDEVSVTVHVLKTSTSHI*PLSHST Trigger: AGTGGAATGGGACAGAGGCCAAATATGGCTTGTACT...AGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATCTTGTCCTGCATCAGTaGTGCAGTATGTGTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSISLLFCMMSVPKDLVLHQ*CSMCSF Trigger: AAAACTACACATACTGCAGCACTGATGCAGGACAAG...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR GCA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATATTGCTCTTCATTTTCTaGCAAGGTTATTGTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TWSSDFTMCSTHILSTEILLFIF*QGYCAC Trigger: ACATGCACAATAACCTTGGCAGAAAATGAAGAGCAA...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| 3UTR CAA 72 bp | ACATACTTCAGATCAGGTAACCCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATTCCGTTTCCGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TYFRSGNPLKIS*RLSSEIPFPRN Trigger: ATTTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAGTATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR GCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTTTGCTCTTCATTTTCTaGCAAGGTTATTGTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HTLGENLPLIPLKWPLKILLFIF*QGYCAC Trigger: ACATGCACAATAACCTTGGCAGAAAATGAAGAGCAA...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CCA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTTTCCATCAAATTCTTTaGCTCCTTTCTTACATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTLGENLPLIPLKWPLKIFHQIL*LLSYIC Trigger: GCAAATGTAAGAAAGGAGCCAAAGAATTTGATGGAA...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| 3UTR CAA 72 bp | TGTTTTGTCTTAGAGCCTGACAGCCTAACTATCTGTTaGTTTAGGAGAATTGACTTCGTTCATATAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFVLEPDSLTIC*FRRIDFVHIER Trigger: CCTTTCTATATGAACGAAGTCAATTCTCCTAAACAAACAGATAGTTAGGCTGTCAGGCTCTAAGACAAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR CAA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTCTGTGGTTCCTGGGGTaGAAGCTGAAGGCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HVCMLLLPIPGKPLASSCLWFLG*KLKAGE Trigger: TTCCCCTGCCTTCAGCTTCAACCCCAGGAACCACAG...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS TCA 90 bp | GGTCCAGTCATGGGGATGAGCAAGACATCCGGGAGGGCTGGATGCTaGACAACAGGAATGCTGGATTCACCAAACTGCTTCTGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPVMGMSKTSGRAGC*TTGMLDSPNCFWSS Trigger: AGAGCTCCAGAAGCAGTTTGGTGAATCCAGCATTCCTGTTGTTCAGCATCCAGCCCTCCCGGATGTCTTGCTCATCCCCATGACTGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS GCA 90 bp | TGCAGTGGTACAACAGACGGATCAAATCGCTGCAGCTGCTTCAATTaGTCCAATGTCAGGCCAGCTCCCACCATCCCTTCTCCTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: CSGTTDGSNRCSCFN*SNVRPAPTIPSPPI Trigger: GATTGGAGGAGAAGGGATGGTGGGAGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CATGAGGCTGATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATCTGTGGTTCCTGGGGTaGAAGCTGAAGGCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HEADYAFLSPTSPEPRMHLWFLG*KLKAGE Trigger: TTCCCCTGCCTTCAGCTTCAACCCCAGGAACCACAG...ATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATCAGCCTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACCTGCAGCTGCTTCAATaGCTCCAATGTCAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPREAISIILFPEQPCHHLQLLQ*LQCQAS Trigger: GCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAG...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS GCA 90 bp | TCCATGTTCTGCAGTGGTACAACAGACGGATCAAATCGCTGCAGCTaGTTCAATTGCTCCAATGTCAGGCCAGCTCCCACCATCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMFCSGTTDGSNRCS*FNCSNVRPAPTIPS Trigger: AGAAGGGATGGTGGGAGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCAGAACATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS GCA 90 bp | TCAGTGTCCATGTTCTGCAGTGGTACAACAGACGGATCAAATCGCTaGAGCTGCTTCAATTGCTCCAATGTCAGGCCAGCTCCCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SVSMFCSGTTDGSNR*SCFNCSNVRPAPTI Trigger: GATGGTGGGAGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCAGAACATGGACACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | AACTCTAACATAATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTGGCTCTCTGCAGCTGCTTCAATaGCTCCAATGTCAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSNIITSGTAPGDGSPGSLQLLQ*LQCQAS Trigger: GCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAG...AGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS TCA 90 bp | CACCCTGTTGTCTTTCTATATTCTTCCTTGGTCCAGTCATGGGGATaGGCAAGACATCCGGGAGGGCTGGATGCTGAACAACAGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: HPVVFLYSSLVQSWG*ARHPGGLDAEQQEC Trigger: GCATTCCTGTTGTTCAGCATCCAGCCCTCCCGGATGTCTTGCTCATCCCCATGACTGGACCAAGGAAGAATATAGAAAGACAACAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | AACTCTAACATAATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTGGCTCTGAGGGCCCAGGCAACTaGCTCTTCATTTTCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NSNIITSGTAPGDGSPGSEGPGN*LFIFCQ Trigger: TTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCTC...AGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS CCA 90 bp | TTCCCTTCTGGCCTCTCCAAGAGAATCAGTGTCCATGTTCTGCAGTaGTACAACAGACGGATCAAATCGCTGCAGCTGCTTCAATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPSGLSKRISVHVLQ*YNRRIKSLQLLQLL Trigger: GAGCAATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCAGAACATGGACACTGATTCTCTTGGAGAGGCCAGAAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CAGACCCCCACAGGCAACTCCTTTCCTTTCATAAAGCATGAGGCTGATTATGCTCTGCTTCTTGTCTGCTaGAAGCAGACACAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QTPTGNSFPFIKHEADYALLLVC*KQTQPP Trigger: AGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCAG...AGCATAATCAGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTAGATCAGGTAACCCATaGAAGATATCTTTGCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HVCMLLLPIPGKPLASSCRSGNP*KISLRL Trigger: GAGCCGCAAAGATATCTTCAATGGGTTACCTGATCT...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CATGAGGCTGATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATGCTATTACTTCTCCCTaGTCCTGCATCAGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HEADYAFLSPTSPEPRMHAITSP*SCISAA Trigger: TGCAGCACTGATGCAGGACAAGGGAGAAGTAATAGC...ATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATCAGCCTCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATACTGTGGTTCCTGGGGTaGAAGCTGAAGGCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TWSSDFTMCSTHILSTEILWFLG*KLKAGE Trigger: TTCCCCTGCCTTCAGCTTCAACCCCAGGAACCACAG...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS TCA 90 bp | CCAAACTGCTTCTGGAGCTCTTCAAGCAGCAGACCTCTGACATGCTaGACTGAGCCTAAATGCGTATTCACTCTGACAGTTGTCATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PNCFWSSSSSRPLTC*TEPKCVFTLTVVID Trigger: GTCGATGACAACTGTCAGAGTGAATACGCATTTAGGCTCAGTTCAGCATGTCAGAGGTCTGCTGCTTGAAGAGCTCCAGAAGCAGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000195749.6 |
||
| CDS GCA 90 bp | ATGTCTTCCCTTCTGGCCTCTCCAAGAGAATCAGTGTCCATGTTCTaGAGTGGTACAACAGACGGATCAAATCGCTGCAGCTGCTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: MSSLLASPRESVSMF*SGTTDGSNRCSCFN Trigger: ATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCAGAACATGGACACTGATTCTCTTGGAGAGGCCAGAAGGGAAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTAAGCCTATACAGTCTTaGTTGGCCAACCAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: HVCMLLLPIPGKPLASSCKPIQS*LANQIM Trigger: CATGATTTGGTTGGCCAACAAAGACTGTATAGGCTT...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS GCA 90 bp | ACACAATTCCTGGAACATAGACATGGGCCCCTCTTAACACTGCATTaGCACACTGTGCGCCAACAATCACTTCACCCTGTTGTCTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TQFLEHRHGPLLTLH*HTVRQQSLHPVVFL Trigger: TAGAAAGACAACAGGGTGAAGTGATTGTTGGCGCACAGTGTGGCAATGCAGTGTTAAGAGGGGCCCATGTCTATGTTCCAGGAATTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGCTGCTTCTTGTCTGCTaGAAGCAGACACAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLLLLVC*KQTQPP Trigger: AGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCAG...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CACGTATGCATGCTGCTCCTTCCGATCCCAGGGAAGCCATTAGCATCATCCTGTCCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: HVCMLLLPIPGKPLASSCPLKIS*RLSSEI Trigger: AATTTCTGAACTGAGCCGCAAAGATATCTTCAATGG...ACAGGATGATGCTAATGGCTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | AACTCTAACATAATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTGGCTCTAGATCAGGTAACCCATaGAAGATATCTTTGCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NSNIITSGTAPGDGSPGSRSGNP*KISLRL Trigger: GAGCCGCAAAGATATCTTCAATGGGTTACCTGATCT...AGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACAAGCCTATACAGTCTTaGTTGGCCAACCAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: DPREAISIILFPEQPCHHKPIQS*LANQIM Trigger: CATGATTTGGTTGGCCAACAAAGACTGTATAGGCTT...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | GATTATGCTTTCCTATCCCCCACTTCCCCAGAACCACGTATGCATGCTGCTCCTAAGCCTATACAGTCTTaGTTGGCCAACCAAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: DYAFLSPTSPEPRMHAAPKPIQS*LANQIM Trigger: CATGATTTGGTTGGCCAACAAAGACTGTATAGGCTT...AGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS TCA 90 bp | GCGAAGCAGCAGAGTCTCAAATTTCCTTTCTGCTTCTTGTCTGCTTaGAGCAGACACAGCCTCCTCGTTCAAAAAGCTCTCTTTGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: AKQQSLKFPFCFLSA*SRHSLLVQKALFEI Trigger: TATCTCAAAGAGAGCTTTTTGAACGAGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCAGAAAGGAAATTTGAGACTCTGCTGCTTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAAAACTCTGCTTCTTGTCTGCTaGAAGCAGACACAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTYLSYDEVSVTVHVLKTLLLVC*KQTQPP Trigger: AGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCAG...AGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAAGTACAAGCCATATTaGGCCTCTGTCCCATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLKYKPY*ASVPFH Trigger: GTGGAATGGGACAGAGGCCAAATATGGCTTGTACTT...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATGAGGGCCCAGGCAACTaGCTCTTCATTTTCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSISLLFCMMSVPKDEGPGN*LFIFCQ Trigger: TTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCTC...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTGAGGGCCCAGGCAACTaGCTCTTCATTTTCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HTLGENLPLIPLKWPLKIEGPGN*LFIFCQ Trigger: TTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCTC...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGGGAAGCCATTAGCATCATCCTGTTTCCTGAGCAACCATGCCATCACGAGAAACCTTCGCTTTaGTGCTTTGACATTTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DPREAISIILFPEQPCHHEKPSL*CFDILE Trigger: TTCTAAAATGTCAAAGCACAAAAGCGAAGGTTTCTC...GTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGGCTTCCCTGGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | TTTGCGGCTCAGTTCAGAAATTCCGTTTCCGAGAAATACTTTAGTTCCATCAAACTGCTTCTTGTCTGCTaGAAGCAGACACAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FAAQFRNSVSEKYFSSIKLLLVC*KQTQPP Trigger: AGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCAG...TTTGATGGAACTAAAGTATTTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGTAAGCCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: FPEQPCHHSVGLTTLLCKPLKIS*RLSSEI Trigger: AATTTCTGAACTGAGCCGCAAAGATATCTTCAATGG...CTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGAAAACTGCTATTACTTCTCCCTaGTCCTGCATCAGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTYLSYDEVSVTVHVLKTAITSP*SCISAA Trigger: TGCAGCACTGATGCAGGACAAGGGAGAAGTAATAGC...AGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTGCTATTACTTCTCCCTaGTCCTGCATCAGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTLGENLPLIPLKWPLKIAITSP*SCISAA Trigger: TGCAGCACTGATGCAGGACAAGGGAGAAGTAATAGC...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | AACGAGCCTACTTACCTCAGTTATGATGAGGTTAGTGTTACTGTCCATGTCCTGTTTCTGCCAAGGTTATaGTGCATGTGCTGTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: NEPTYLSYDEVSVTVHVLFLPRL*CMCCRP Trigger: TGGTCTACAGCACATGCACAATAACCTTGGCAGAAA...CAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | AACTCTAACATAATAACCTCTGGAACAGCTCCTGGGGATGGGAGTCCTGGCTCTGAGAAACCTTCGCTTTaGTGCTTTGACATTTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSNIITSGTAPGDGSPGSEKPSL*CFDILE Trigger: TTCTAAAATGTCAAAGCACAAAAGCGAAGGTTTCTC...AGAGCCAGGACTCCCATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGAGCAACCATGCCATCACTCCGTTGGCTTGACAACACTTCTGTGTAAGGCTCCTTTCTTACATTaGCCGTTAATATCAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: FPEQPCHHSVGLTTLLCKAPFLH*PLISEY Trigger: GTATTCTGATATTAACGGCAAATGTAAGAAAGGAGC...CTTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CAGACCCCCACAGGCAACTCCTTTCCTTTCATAAAGCATGAGGCTGATTATGCTGCTCCTTTCTTACATTaGCCGTTAATATCAGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: QTPTGNSFPFIKHEADYAAPFLH*PLISEY Trigger: GTATTCTGATATTAACGGCAAATGTAAGAAAGGAGC...AGCATAATCAGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTAAGTACAAGCCATATTaGGCCTCTGTCCCATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HTLGENLPLIPLKWPLKIKYKPY*ASVPFH Trigger: GTGGAATGGGACAGAGGCCAAATATGGCTTGTACTT...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATAAGTACAAGCCATATTaGGCCTCTGTCCCATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSISLLFCMMSVPKDKYKPY*ASVPFH Trigger: GTGGAATGGGACAGAGGCCAAATATGGCTTGTACTT...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CAGACCCCCACAGGCAACTCCTTTCCTTTCATAAAGCATGAGGCTGATTATGCTGAGAAACCTTCGCTTTaGTGCTTTGACATTTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QTPTGNSFPFIKHEADYAEKPSL*CFDILE Trigger: TTCTAAAATGTCAAAGCACAAAAGCGAAGGTTTCTC...AGCATAATCAGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | ACGTGGTCCTCTGACTTCACCATGTGTTCCACACACATACTCAGTACAGAAATACCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: TWSSDFTMCSTHILSTEIPLKIS*RLSSEI Trigger: AATTTCTGAACTGAGCCGCAAAGATATCTTCAATGG...TATTTCTGTACTGAGTATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATTTTCTGCCAAGGTTATaGTGCATGTGCTGTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSISLLFCMMSVPKDFLPRL*CMCCRP Trigger: TGGTCTACAGCACATGCACAATAACCTTGGCAGAAA...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS-3UTR CAA 90 bp | CATACCTTGGGGGAGAACCTTCCATTGATACCTTTGAAATGGCCTTTGAAAATTTTTCTGCCAAGGTTATaGTGCATGTGCTGTAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: HTLGENLPLIPLKWPLKIFLPRL*CMCCRP Trigger: TGGTCTACAGCACATGCACAATAACCTTGGCAGAAA...AATTTTCAAAGGCCATTTCAAAGGTATCAATGGAAGGTTCTCCCCCAAGGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
||
| CDS TCA 90 bp | GTTCTGTCATTCTTATGCCTATACCTTTCAGATCAGGTAACCCATTaGAGATATCTTTGCGGCTCAGTTCAGAAATTCCGTTTCCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLSFLCLYLSDQVTH*RYLCGSVQKFRFRE Trigger: TTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAAGGTATAGGCATAAGAATGACAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS TCA 90 bp | GTCTGCTTGAAGCAGACACAGCCTCCTCGTTCAAAAAGCTCTCTTTaGGATAGTTTTCAACTTCAGGTCTCAAAGATATCTTTGGAAATA | + |
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Preference number: 5 (lower is better) Translates to: VCLKQTQPPRSKSSL*DSFQLQVSKISLEI Trigger: TATTTCCAAAGATATCTTTGAGACCTGAAGTTGAAAACTATCTCAAAGAGAGCTTTTTGAACGAGGAGGCTGTGTCTGCTTCAAGCAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000195749.6 |
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| CDS TCA 90 bp | AGCTTAAGTGCCTTTGTTGCATCGAAGCAAAATGCCCGGATAGAATaGAGCCCTAATAATGAAGCATTCTGCTTCAGTTTGTTCACTTTT | + |
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Preference number: 5 (lower is better) Translates to: SLSAFVASKQNARIE*SPNNEAFCFSLFTF Trigger: AAAAGTGAACAAACTGAAGCAGAATGCTTCATTATTAGGGCTTCATTCTATCCGGGCATTTTGCTTCGATGCAACAAAGGCACTTAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATAATCACTTCACCCTGTaGTCTTTCTATATTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSSPSISLLFCMMSVPKDNHFTL*SFYILP Trigger: AGGAAGAATATAGAAAGACAACAGGGTGAAGTGATT...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCTCACCAAGCATTTCCCTATTATTTTGCATGATGTCTGTTCCCAAAGATGCTCCTTTCTTACATTaGCCGTTAATATCAGAATAC | + |
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Preference number: 5 (lower is better) Translates to: SSSPSISLLFCMMSVPKDAPFLH*PLISEY Trigger: GTATTCTGATATTAACGGCAAATGTAAGAAAGGAGC...ATCTTTGGGAACAGACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000195749.6 |
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| CDS TCA 90 bp | TCTGTAAAAATATATAACTGGGTAGAACATTGTCAAACGAGGGACTaGGATATATGGGTTCTGTCATTCTTATGCCTATACCTTTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SVKIYNWVEHCQTRD*DIWVLSFLCLYLSD Trigger: ATCTGAAAGGTATAGGCATAAGAATGACAGAACCCATATATCTCAGTCCCTCGTTTGACAATGTTCTACCCAGTTATATATTTTTACAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS GCA 72 bp | TGCAGTGGTACAACAGACGGATCAAATCGCTGCAGCTaGTTCAATTGCTCCAATGTCAGGCCAGCTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: CSGTTDGSNRCS*FNCSNVRPAPT Trigger: GGTGGGAGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 90 bp | TTCGGAGGGCCCAGGCAACTTGCTCTTCATTTTCTGCCAAGGTTATaGTGCATGTGCTGTAGACCAGCACTCCCCCTGGCTTCAGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: FGGPRQLALHFLPRL*CMCCRPALPLASGV Trigger: AACTCCTGAAGCCAGGGGGAGTGCTGGTCTACAGCACATGCACAATAACCTTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCTCCGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 90 bp | CTGCAGTGGTACAACAGACGGATCAAATCGCTGCAGCTGCTTCAATaGCTCCAATGTCAGGCCAGCTCCCACCATCCCTTCTCCTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: LQWYNRRIKSLQLLQ*LQCQASSHHPFSSN Trigger: ATTGGAGGAGAAGGGATGGTGGGAGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | ATGGGGATGAGCAAGACATCCGGGAGGGCTGGATGCTaGACAACAGGAATGCTGGATTCACCAAACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MGMSKTSGRAGC*TTGMLDSPNCF Trigger: GAAGCAGTTTGGTGAATCCAGCATTCCTGTTGTTCAGCATCCAGCCCTCCCGGATGTCTTGCTCATCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS GCA 72 bp | ACAACAGACGGATCAAATCGCTGCAGCTGCTTCAATTaGTCCAATGTCAGGCCAGCTCCCACCATCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TTDGSNRCSCFN*SNVRPAPTIPS Trigger: AGAAGGGATGGTGGGAGCTGGCCTGACATTGGAGCAATTGAAGCAGCTGCAGCGATTTGATCCGTCTGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | ATCTCCAGCTTTCATAACTTGGTCCAGTCATGGGGATaGGCAAGACATCCGGGAGGGCTGGATGCTGAACAA | + |
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Preference number: 6 (lower is better) Translates to: ISSFHNLVQSWG*ARHPGGLDAEQ Trigger: TTGTTCAGCATCCAGCCCTCCCGGATGTCTTGCTCATCCCCATGACTGGACCAAGTTATGAAAGCTGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114713.2 |
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| CDS GCA 72 bp | CTGGAACATAGACATGGGCCCCTCTTAACACTGCATTaGCACACTGTGCGCCAACAATCACTTCACCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LEHRHGPLLTLH*HTVRQQSLHPV Trigger: AACAGGGTGAAGTGATTGTTGGCGCACAGTGTGGCAATGCAGTGTTAAGAGGGGCCCATGTCTATGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CCA 72 bp | GGTTATTGTGCATGTGCTGTAGACCAGCACTCCCCCTaGCTTCAGGAGTTGAACTGCCACATGAAGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: GYCACAVDQHSP*LQELNCHMKEF Trigger: AAACTCCTTCATGTGGCAGTTCAACTCCTGAAGCCAGGGGGAGTGCTGGTCTACAGCACATGCACAATAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CCA 72 bp | GGCCTCTCCAAGAGAATCAGTGTCCATGTTCTGCAGTaGTACAACAGACGGATCAAATCGCTGCAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GLSKRISVHVLQ*YNRRIKSLQLL Trigger: AAGCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCAGAACATGGACACTGATTCTCTTGGAGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | CGTATTCACTCTGACAGTTGTCATCGACGGAGGGTGTaGCAGGCGAAGCAGCAGAGTCTCAAATTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RIHSDSCHRRRV*QAKQQSLKFPF Trigger: GAAAGGAAATTTGAGACTCTGCTGCTTCGCCTGTCACACCCTCCGTCGATGACAACTGTCAGAGTGAATACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | GTCTTTCTATATTCTTCCTTGGTCCAGTCATGGGGATaGGCAAGACATCCGGGAGGGCTGGATGCTGAACAA | + |
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Preference number: 6 (lower is better) Translates to: VFLYSSLVQSWG*ARHPGGLDAEQ Trigger: TTGTTCAGCATCCAGCCCTCCCGGATGTCTTGCTCATCCCCATGACTGGACCAAGGAAGAATATAGAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 90 bp | ATTACTTCTCCCTTGTCCTGCATCAGTGCTGCAGTATGTGTAGTTTaGCCCCCAGGGGCTGCACACATATCTAGAATCTTCTCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ITSPLSCISAAVCVV*PPGAAHISRIFSPG Trigger: ACCTGGAGAGAAGATTCTAGATATGTGTGCAGCCCCTGGGGGCAAAACTACACATACTGCAGCACTGATGCAGGACAAGGGAGAAGTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CCA 72 bp | AATCACTTCACCCTGTTGTCTTTCTATATTCTTCCTTaGTCCAGTCATGGGGATGAGCAAGACATCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: NHFTLLSFYILP*SSHGDEQDIRE Trigger: CTCCCGGATGTCTTGCTCATCCCCATGACTGGACCAAGGAAGAATATAGAAAGACAACAGGGTGAAGTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 72 bp | GCAGAGTCTCAAATTTCCTTTCTGCTTCTTGTCTGCTaGAAGCAGACACAGCCTCCTCGTTCAAAAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AESQISFLLLVC*KQTQPPRSKSS Trigger: AGAGCTTTTTGAACGAGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCAGAAAGGAAATTTGAGACTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000195749.6 |
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| CDS CAA 72 bp | ATGTCACTTCCTTTAAAGTCCAAGTACAAGCCATATTaGGCCTCTGTCCCATTCCACTGCAGGGTGCATCAA | + |
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Preference number: 6 (lower is better) Translates to: MSLPLKSKYKPY*ASVPFHCRVHQ Trigger: TTGATGCACCCTGCAGTGGAATGGGACAGAGGCCAAATATGGCTTGTACTTGGACTTTAAAGGAAGTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | GCCTTTGTTGCATCGAAGCAAAATGCCCGGATAGAATaGAGCCCTAATAATGAAGCATTCTGCTTCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: AFVASKQNARIE*SPNNEAFCFSL Trigger: CAAACTGAAGCAGAATGCTTCATTATTAGGGCTTCATTCTATCCGGGCATTTTGCTTCGATGCAACAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | AAGCAGACACAGCCTCCTCGTTCAAAAAGCTCTCTTTaGGATAGTTTTCAACTTCAGGTCTCAAAGATATCT | + |
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Preference number: 6 (lower is better) Translates to: KQTQPPRSKSSL*DSFQLQVSKIS Trigger: AGATATCTTTGAGACCTGAAGTTGAAAACTATCTCAAAGAGAGCTTTTTGAACGAGGAGGCTGTGTCTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114713.2 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | TTCTTATGCCTATACCTTTCAGATCAGGTAACCCATTaGAGATATCTTTGCGGCTCAGTTCAGAAATTCCGT | + |
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Preference number: 6 (lower is better) Translates to: FLCLYLSDQVTH*RYLCGSVQKFR Trigger: ACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAAGGTATAGGCATAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 72 bp | ATACCTTTCAGATCAGGTAACCCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATTCCGTTTCCGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: IPFRSGNPLKIS*RLSSEIPFPRN Trigger: ATTTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAAGGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 72 bp | ATTCTTATGCCTATACCTTTCAGATCAGGTAACCCATaGAAGATATCTTTGCGGCTCAGTTCAGAAATTCCG | + |
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Preference number: 6 (lower is better) Translates to: ILMPIPFRSGNP*KISLRLSSEIP Trigger: CGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAAGGTATAGGCATAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 90 bp | CTTATGCCTATACCTTTCAGATCAGGTAACCCATTGAAGATATCTTaGCGGCTCAGTTCAGAAATTCCGTTTCCGAGAAATACTTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: LMPIPFRSGNPLKIS*RLSSEIPFPRNTLV Trigger: AACTAAAGTATTTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCAATGGGTTACCTGATCTGAAAGGTATAGGCATAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 72 bp | TTTGTCAATATTTTGTCCAATGCTATTACTTCTCCCTaGTCCTGCATCAGTGCTGCAGTATGTGTAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: FVNILSNAITSP*SCISAAVCVVL Trigger: CAAAACTACACATACTGCAGCACTGATGCAGGACAAGGGAGAAGTAATAGCATTGGACAAAATATTGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 72 bp | GCATTCTGCTTCAGTTTGTTCACTTTTGTCAATATTTaGTCCAATGCTATTACTTCTCCCTTGTCCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: AFCFSLFTFVNI*SNAITSPLSCI Trigger: GATGCAGGACAAGGGAGAAGTAATAGCATTGGACAAAATATTGACAAAAGTGAACAAACTGAAGCAGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 90 bp | AATAATGAAGCATTCTGCTTCAGTTTGTTCACTTTTGTCAATATTTaGTCCAATGCTATTACTTCTCCCTTGTCCTGCATCAGTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: NNEAFCFSLFTFVNI*SNAITSPLSCISAA Trigger: TGCAGCACTGATGCAGGACAAGGGAGAAGTAATAGCATTGGACAAAATATTGACAAAAGTGAACAAACTGAAGCAGAATGCTTCATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS TCA 72 bp | ATATATAACTGGGTAGAACATTGTCAAACGAGGGACTaGGATATATGGGTTCTGTCATTCTTATGCCTATAC | + |
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Preference number: 6 (lower is better) Translates to: IYNWVEHCQTRD*DIWVLSFLCLY Trigger: GTATAGGCATAAGAATGACAGAACCCATATATCTCAGTCCCTCGTTTGACAATGTTCTACCCAGTTATATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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| CDS CAA 90 bp | TCAGAAATTCCGTTTCCGAGAAATACTTTAGTTCCATCAAATTCTTaGGCTCCTTTCTTACATTTGCCGTTAATATCAGAATACACGGAA | + |
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Preference number: 6 (lower is better) Translates to: SEIPFPRNTLVPSNS*APFLHLPLISEYTE Trigger: TTCCGTGTATTCTGATATTAACGGCAAATGTAAGAAAGGAGCCAAAGAATTTGATGGAACTAAAGTATTTCTCGGAAACGGAATTTCTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028034.15 ENSMUST00000076435.9 ENSMUST00000114715.8 ENSMUST00000195749.6 |
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