Pregenerated sensors for NSUN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028706Ensembl transcript IDs: ENSMUST00000030474.12, ENSMUST00000030475.3, ENSMUST00000165493.8
Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGCTGGCGGGCCTGTGGGTTGATTAAATGGAACTCACCAGTGTaGGAGGACTGGAGGCCTGGCTGGGCACTTTGGAGAGTGTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GGWRACGLIKWNSPV*EDWRPGWALWRVCL Trigger: CAAGCACACTCTCCAAAGTGCCCAGCCAGGCCTCCAGTCCTCCCACACTGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCAGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR CCA 90 bp | CGGGCCTGTGGGTTGATTAAATGGAACTCACCAGTGTGGGAGGACTaGAGGCCTGGCTGGGCACTTTGGAGAGTGTGCTTGGCGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: RACGLIKWNSPVWED*RPGWALWRVCLAAS Trigger: TGAAGCCGCCAAGCACACTCTCCAAAGTGCCCAGCCAGGCCTCCAGTCCTCCCACACTGGTGAGTTCCATTTAATCAACCCACAGGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR TCA 90 bp | AGGGATGGAGTTGGAGAGAGGCCACTCTCAGGCTCCAGTTTCTGGTaGGAGATGGCTTCACTGACGAAGTCCTTGGCACTCAGCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RDGVGERPLSGSSFW*EMASLTKSLALSCS Trigger: GGAGCAGCTGAGTGCCAAGGACTTCGTCAGTGAAGCCATCTCTCACCAGAAACTGGAGCCTGAGAGTGGCCTCTCTCCAACTCCATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR TCA 90 bp | GAAGTGGAGAGGTCGTTGGCAGCTAGATTACGGCAACAACCCGTCTaGAGTAATGCCAGCGTTTTGCCCCCAGGAGCAGCACACAGATCA | + |
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Preference number: 1 (lower is better) Translates to: EVERSLAARLRQQPV*SNASVLPPGAAHRS Trigger: TGATCTGTGTGCTGCTCCTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTTGTTGCCGTAATCTAGCTGCCAACGACCTCTCCACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR TCA 90 bp | ATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATaGGGTAACTCGGACTTGGTTCCCTTCCCTAATATCTTGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: IIGVPLQFSPLPAIP*GNSDLVPFPNILRH Trigger: GTGCCTCAAGATATTAGGGAAGGGAACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGACACCTATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR GCA 90 bp | CAGCTAGATTACGGCAACAACCCGTCTGAAGTAATGCCAGCGTTTTaGCCCCAGGAGCAGCACACAGATCAAGCACAGTGTCTCCATGCT | + |
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Preference number: 1 (lower is better) Translates to: QLDYGNNPSEVMPAF*PQEQHTDQAQCLHA Trigger: AGCATGGAGACACTGTGCTTGATCTGTGTGCTGCTCCTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTTGTTGCCGTAATCTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR CCA 90 bp | TCTGGAAAAAGTGAAGCATCGAAGATTTGGGCTGCAGTCCAGGGATaGAGTTGGAGAGAGGCCACTCTCAGGCTCCAGTTTCTGGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: SGKSEASKIWAAVQG*SWREATLRLQFLVR Trigger: TCTCACCAGAAACTGGAGCCTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGACTGCAGCCCAAATCTTCGATGCTTCACTTTTTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR TCA 90 bp | CCTAATGGAGCAAGGGCCTTAGTAGAGGCTAAGAGACATGAGACATaGGTTAGAAACCTGCTGATAATCCAGAGCTGGGCAGCAGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PNGARALVEAKRHET*VRNLLIIQSWAAVP Trigger: AGGGACTGCTGCCCAGCTCTGGATTATCAGCAGGTTTCTAACTCATGTCTCATGTCTCTTAGCCTCTACTAAGGCCCTTGCTCCATTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR CCA 90 bp | GCTGAAAGATGTTGTTCTCTTCCTCATGAAGGGAATGGCGGTCCGTaGTACATGGCACATCTACTAACACCCTATCATAGGTGTCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: AERCCSLPHEGNGGP*YMAHLLTPYHRCPP Trigger: AGGGGGACACCTATGATAGGGTGTTAGTAGATGTGCCATGTACCACGGACCGCCATTCCCTTCATGAGGAAGAGAACAACATCTTTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR CCA 90 bp | CCTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTaGCACTATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: PQFQWSHHLPTSGTG*HYGSLCSLQKYIGP Trigger: TGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR GCA 90 bp | AGAAACCTGCTGATAATCCAGAGCTGGGCAGCAGTCCCTACTGCCTaGTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: RNLLIIQSWAAVPTA*CLQLSLDVMDGDRP Trigger: AGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCCCAGCTCTGGATTATCAGCAGGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR GCA 90 bp | CATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCTATaGAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: HHLPTSGTGWHYGSL*SLQKYIGPKLTMRF Trigger: AAACCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR CCA 90 bp | TCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATaGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGAC | + |
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Preference number: 1 (lower is better) Translates to: SMESSPSYFRDRVAL*QPMQFAEVHRSKID Trigger: GTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR CCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTaGGATACACCTGCCACTAGCCTCAGTTTCAATGGAGTCATCACC | + |
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Preference number: 1 (lower is better) Translates to: CCLQLSLDVMDGDRP*DTPATSLSFNGVIT Trigger: GGTGATGACTCCATTGAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 ENSMUST00000165493.8 |
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| 3UTR CCA 90 bp | ATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGGCAGGATaGGAAGAAACAGAATGTGTCCATGAAAAGCTTTCGGAAGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: IDHEVWYYQLPNLAG*EETECVHEKLSEVR Trigger: TCTCACTTCCGAAAGCTTTTCATGGACACATTCTGTTTCTTCCCATCCTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR TCA 90 bp | AGAACTGAAGACTTCAGACGAGGAGTTGGCCCTCATTGTAACAACTaGGATACTACTGATGGCAGTCTTGTTAATGCACCTTCTACCCTC | + |
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Preference number: 1 (lower is better) Translates to: RTEDFRRGVGPHCNN*DTTDGSLVNAPSTL Trigger: GAGGGTAGAAGGTGCATTAACAAGACTGCCATCAGTAGTATCTCAGTTGTTACAATGAGGGCCAACTCCTCGTCTGAAGTCTTCAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR CCA 90 bp | ATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGTTTaGTATTACCAGCTCCCCAACCTGGCAGGATGGGAAGAAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: MQFAEVHRSKIDHEV*YYQLPNLAGWEETE Trigger: TTCTGTTTCTTCCCATCCTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR GCA 90 bp | ATGTCAGGAAACTCCGAGGTACTTGGAGAGCGAAAAGAAGTAGGTTaGCATTCTGAAGATGAGGAAATCCAACTATTTACCATGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: MSGNSEVLGERKEVG*HSEDEEIQLFTMVP Trigger: TGGGACCATGGTAAATAGTTGGATTTCCTCATCTTCAGAATGGCAACCTACTTCTTTTCGCTCTCCAAGTACCTCGGAGTTTCCTGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR GCA 90 bp | ACACTATCCCAAGCAGCAAAATTATTGACCAATGCACCATACTTCTaGTCTGAGAGAAGACTAACACGGATTGATGGCCAAAGATCCCCA | + |
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Preference number: 1 (lower is better) Translates to: TLSQAAKLLTNAPYF*SERRLTRIDGQRSP Trigger: TGGGGATCTTTGGCCATCAATCCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATTGGTCAATAATTTTGCTGCTTGGGATAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR CCA 90 bp | GTACCCAACTGCAGGCCCACCCTTAGAGCACTTCAACAACTTTATTaGCTAAATGTTTCTTCCCAAATTTACAGCTTAAACTATGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: VPNCRPTLRALQQLY*LNVSSQIYSLNYGL Trigger: GAGCCCATAGTTTAAGCTGTAAATTTGGGAAGAAACATTTAGCCAATAAAGTTGTTGAAGTGCTCTAAGGGTGGGCCTGCAGTTGGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR CAA 90 bp | CATGTGCCATATGGAGACACTTGGGGAGGCTGGCGGGCCTGTGGGTaGATTAAATGGAACTCACCAGTGTGGGAGGACTGGAGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: HVPYGDTWGGWRACG*IKWNSPVWEDWRPG Trigger: GCCAGGCCTCCAGTCCTCCCACACTGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCAGCCTCCCCAAGTGTCTCCATATGGCACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATGAGGAGCACAGTGTCTCCATaGTGCAGACCAAGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PYHRCPPPVLPTSCHPMRSTVSP*CRPRAR Trigger: CCTGGCTCTTGGTCTGCAGCATGGAGACACTGTGCT...CCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGACACCTATGATAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATGAGGTCAGTTTCAGCCTCCTaGGTAGCTGGGACTACATGT | + |
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Preference number: 2 (lower is better) Translates to: PYHRCPPPVLPTSCHPMRSVSAS*VAGTTC Trigger: ACATGTAGTCCCAGCTACTCAGGAGGCTGAAACTGA...CCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGACACCTATGATAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
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| 3UTR-3UTR CCA 90 bp | AGCCGCAAGAAGCTGCACCTGCAGCATAGGCAACATCTGTCGCTCCTTCTTCCTACCAGCTCCCCAACCTaGCAGGATGGGAAGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: SRKKLHLQHRQHLSLLLPTSSPT*QDGKKQ Trigger: CTGTTTCTTCCCATCCTGCCAGGTTGGGGAGCTGGT...AGGAAGAAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR CCA 90 bp | AACCCGTCTGAAGTAATGCCAGCGTTTTGCCCCCAGGAGCAGCACACAGATCAAGTCCAGGGATGGAGTTaGAGAGAGGCCACTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: NPSEVMPAFCPQEQHTDQVQGWS*REATLR Trigger: CCTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGAC...TTGATCTGTGTGCTGCTCCTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGACAACGTGACCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGTTGTTCTCTTCCTCATaGAGGGAATGGCGGTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: IDNVTSWFGGKESSRKKLLFSSS*REWRSV Trigger: CACGGACCGCCATTCCCTTCATGAGGAAGAGAACAA...CAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | AACCCGTCTGAAGTAATGCCAGCGTTTTGCCCCCAGGAGCAGCACACAGATCAAGAGAGATGGCTTCACTaGCGAAGTCCTTGGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: NPSEVMPAFCPQEQHTDQERWLH*RSPWHS Trigger: TGAGTGCCAAGGACTTCGTCAGTGAAGCCATCTCTC...TTGATCTGTGTGCTGCTCCTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCAGCCGCAAGAAGCTGCACCTGCAGCATAGGCAACATCTGTCGCTCCTTGTTTCCAGTTCTTCATaGAGGGAGATTAGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ESSRKKLHLQHRQHLSLLVSSSS*REIRAG Trigger: CCCTGCTCTAATCTCCCTCCATGAAGAACTGGAAAC...AAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGCGGCTGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
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| 3UTR-3UTR CCA 90 bp | ATAGACAACGTGACCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGTGGCCAGAAGCTCAATaGCACCTTGCACCACATACT | + |
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Preference number: 2 (lower is better) Translates to: IDNVTSWFGGKESSRKKLWPEAQ*HLAPHT Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTTCTGGCCA...CAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCCACTTCCTGCCATCCCATGAGGTAACTCGGACTTGGTTCCCTTCCCTATGGCCAGAAGCTCAATaGCACCTTGCACCACATACT | + |
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Preference number: 2 (lower is better) Translates to: SPHFLPSHEVTRTWFPSLWPEAQ*HLAPHT Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTTCTGGCCA...TAGGGAAGGGAACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAGTGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCCACTTCCTGCCATCCCATGAGGTAACTCGGACTTGGTTCCCTTCCCTACCTAAGATAATGCAGTaGCTGGACGACGTAATGCAC | + |
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Preference number: 2 (lower is better) Translates to: SPHFLPSHEVTRTWFPSLPKIMQ*LDDVMH Trigger: GTGCATTACGTCGTCCAGTCACTGCATTATCTTAGG...TAGGGAAGGGAACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAGTGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAGATTACGGCAACAACCCGTCTGAAGTAATGCCAGCGTTTTGCCCCCAGGTCATGTCAAAATTCTaGAGAGCAAGCCGACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: QLDYGNNPSEVMPAFCPQVMSKF*RASRLA Trigger: GGCCAGTCGGCTTGCTCTGCAGAATTTTGACATGAC...CTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTTGTTGCCGTAATCTAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGCTTCCTGCCATCCCATaGGGTAACTCGGACTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LSFNGVITFLLQGQGGTMLPAIP*GNSDLV Trigger: AACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAG...CATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCGCAAGAAGCTGCACCTGCAGCATAGGCAACATCTGTCGCTCCTTCTTCCTTTCTTCCTTGACCGCTaGAAGATGTTGTTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: SRKKLHLQHRQHLSLLLPFFLDR*KMLFSS Trigger: GGAAGAGAACAACATCTTTCAGCGGTCAAGGAAGAA...AGGAAGAAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGCGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATGAGGAATGCACCATACTTCTaGTCTGAGAGAAGACTAACA | + |
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Preference number: 2 (lower is better) Translates to: PYHRCPPPVLPTSCHPMRNAPYF*SERRLT Trigger: TGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATT...CCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGACACCTATGATAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACACCGACACTTGGGGAGGCTaGCGGGCCTGTGGGTTGATT | + |
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Preference number: 2 (lower is better) Translates to: LFATIFRCNGWRQALGYTDTWGG*RACGLI Trigger: AATCAACCCACAGGCCCGCCAGCCTCCCCAAGTGTC...GGTGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR CAA 90 bp | CTGCTGATAATCCAGAGCTGGGCAGCAGTCCCTACTGCCTGCTGTTaGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LLIIQSWAAVPTACC*QLSLDVMDGDRPWD Trigger: ATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCCCAGCTCTGGATTATCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR-3UTR TCA 90 bp | AGCCGCAAGAAGCTGCACCTGCAGCATAGGCAACATCTGTCGCTCCTTCTTCCTCTTCCACTTGAACCTTaGTGTTGTATTGATTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SRKKLHLQHRQHLSLLLPLPLEP*CCIDWP Trigger: TGGCCAATCAATACAACATCAAGGTTCAAGTGGAAG...AGGAAGAAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGCGGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCAGGAGGAAAGCGGCTaGCGTCCCCTCTGGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EVHRSKIDHEVWYYQLPNQEESG*RPLWKK Trigger: CTTTTTCCAGAGGGGACGTCAGCCGCTTTCCTCCTG...GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGACAACGTGACCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCCTGGCTCTAAACGTTaGTTTGTTCTGACAAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: IDNVTSWFGGKESSRKKLPGSKR*FVLTSV Trigger: AACACTTGTCAGAACAAAGCAACGTTTAGAGCCAGG...CAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCCAATAAATATTCCAGTTATTGACAAGGCACGCACACACACAGTTGACGGAGGACTGGAGGCCTaGCTGGGCACTTTGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: EEPINIPVIDKARTHTVDGGLEA*LGTLES Trigger: ACTCTCCAAAGTGCCCAGCCAGGCCTCCAGTCCTCC...GTCAACTGTGTGTGTGCGTGCCTTGTCAATAACTGGAATATTTATTGGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACATGGAACTCACCAGTGTaGGAGGACTGGAGGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: CCLQLSLDVMDGDRPWDTWNSPV*EDWRPG Trigger: GCCAGGCCTCCAGTCCTCCCACACTGGTGAGTTCCA...TGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
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| 3UTR-3UTR CCA 90 bp | CATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACCTCCTGGTTGCTGCAGTCCAGGGATaGAGTTGGAGAGAGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: HSVSETVSKLNRQRDLLVAAVQG*SWREAT Trigger: AGTGGCCTCTCTCCAACTCCATCCCTGGACTGCAGC...AACCAGGAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| 3UTR CAA 90 bp | CACCTTGCACCACATACTCATTCTGTAAGTGAGACAGTGAGCAAGTaGAATAGACAACGTGACCTCCTGGTTTGGTGGCAAGGAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HLAPHTHSVSETVSK*NRQRDLLVWWQGVQ Trigger: CTGGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATGAGTATGTGGTGCAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGATGTGCAGATCTTCCTGCCATCCCATaGGGTAACTCGGACTTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CEESLLCGRTQNSRGCADLPAIP*GNSDLV Trigger: AACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAG...ATCTGCACATCCTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGAGCACTCAGGAAAGCTCTCTCTGTAAGAGGATCATCAGCCACAGGCTCACACTATGGCAGCCTATaGAGTTTGCAGAAGTACATA | + |
|
Preference number: 2 (lower is better) Translates to: ARALRKALSVRGSSATGSHYGSL*SLQKYI Trigger: TATGTACTTCTGCAAACTGCATAGGCTGCCATAGTG...TGAGCCTGTGGCTGATGATCCTCTTACAGAGAGAGCTTTCCTGAGTGCTCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR CCA 90 bp | TCACCCCAAAACACCGCGTGTGAGGAAAGCCTGCTATGTGGAAGAACTCAGAACTGTGGGTTGATTAAATaGAACTCACCAGTGTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SPQNTACEESLLCGRTQNCGLIK*NSPVWE Trigger: CTCCCACACTGGTGAGTTCCATTTAATCAACCCACA...GTTCTGAGTTCTTCCACATAGCAGGCTTTCCTCACACGCGGTGTTTTGGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR CCA 90 bp | TATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGGACAACGTGACCTCCTaGTTTGGTGGCAAGGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: YGSLCSLQKYIGPKLTMRDNVTS*FGGKES Trigger: GGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTC...CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTCCCTACTGCCTGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACGACAGGGTGGCACTATaGCAGCCTATGCAGTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: AVPTACCLQLSLDVMDGDDRVAL*QPMQFA Trigger: TGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTC...GTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR CAA 90 bp | CACTATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATaGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGGCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: HYGSLCSLQKYIGPK*TMRFGITSSPTWQD Trigger: ATCCTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACATCAGGTAGTAGTCCATaGGACCCAGGCTGCCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: CCLQLSLDVMDGDRPWDTSGSSP*DPGCQV Trigger: GACTTGGCAGCCTGGGTCTCATGGACTACTACCTGA...TGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTCCTTCTCAATGGATACTTTTAATACTCAAATAGGATTAGCAGGGAAGGCAGACACTTGGGGAGGCTaGCGGGCCTGTGGGTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: TSFSMDTFNTQIGLAGKADTWGG*RACGLI Trigger: AATCAACCCACAGGCCCGCCAGCCTCCCCAAGTGTC...TGCCTTCCCTGCTAATCCTATTTGAGTATTAAAAGTATCCATTGAGAAGGACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACAGACCATGTGCCATATaGAGACACTTGGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: EVHRSKIDHEVWYYQLPNRPCAI*RHLGRL Trigger: CAGCCTCCCCAAGTGTCTCCATATGGCACATGGTCT...GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR CAA 90 bp | CTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCTATGCAGTTaGCAGAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATT | + |
|
Preference number: 2 (lower is better) Translates to: LPTSGTGWHYGSLCS*QKYIGPKLTMRFGI Trigger: AATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CAA 90 bp | AGCTGCTCCAGCTTAGCACTCACACTATCCCAAGCAGCAAAATTATaGACCAATGCACCATACTTCTGCTCTGAGAGAAGACTAACACGG | + |
|
Preference number: 2 (lower is better) Translates to: SCSSLALTLSQAAKL*TNAPYFCSERRLTR Trigger: CCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATTGGTCAATAATTTTGCTGCTTGGGATAGTGTGAGTGCTAAGCTGGAGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGTTCTCTTCCTCATGAAGGGAATGGCGGTCCGTGGTACATGGCACATCTACTTGGCGGCTTCAGCTaGCACATAAACATAATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CCSLPHEGNGGPWYMAHLLGGFS*HINIIE Trigger: TTCTATTATGTTTATGTGTCAGCTGAAGCCGCCAAG...TAGATGTGCCATGTACCACGGACCGCCATTCCCTTCATGAGGAAGAGAACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGCAGTCCCTACTGCCTGCTGTTTGCAACTATCTTTAGATGTAATGGATGGGTGACCCAATCTCTTTaGAACACTTGTGTCTTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GSSPYCLLFATIFRCNGWVTQSL*NTCVFS Trigger: CGAGAAGACACAAGTGTTTCAAAGAGATTGGGTCAC...CCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR TCA 90 bp | CCTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATAACAGAATGTGTCCATaGAAAGCTTTCGGAAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PQFQWSHHLPTSGTGWHYNRMCP*KAFGSE Trigger: CTCACTTCCGAAAGCTTTTCATGGACACATTCTGTT...ATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTACTTATTCCTTAAATTAGACCATGTGCCATATGGAGACACTTGGGGAGGCGGCAGCAGTCCCTACTaGCTGCTGTTTGCAACTATC | + |
|
Preference number: 2 (lower is better) Translates to: SYLFLKLDHVPYGDTWGGGSSPY*LLFATI Trigger: GATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCC...GCCTCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAATAAGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAGCCAATAAATATTCCAGTTATTGACAAGGCACGCACACACACAGTTGACAGACCATGTGCCATATaGAGACACTTGGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: EEPINIPVIDKARTHTVDRPCAI*RHLGRL Trigger: CAGCCTCCCCAAGTGTCTCCATATGGCACATGGTCT...GTCAACTGTGTGTGTGCGTGCCTTGTCAATAACTGGAATATTTATTGGCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGAGCACTCAGGAAAGCTCTCTCTGTAAGAGGATCATCAGCCACAGGCTCAGGAGGGATACAAAAGTaGGAAGAGCCAATAAATATT | + |
|
Preference number: 2 (lower is better) Translates to: ARALRKALSVRGSSATGSGGIQK*EEPINI Trigger: AATATTTATTGGCTCTTCCCACTTTTGTATCCCTCC...TGAGCCTGTGGCTGATGATCCTCTTACAGAGAGAGCTTTCCTGAGTGCTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| 3UTR CAA 90 bp | ATAAAAGAAGAAACATACAAAACCAACCTGTACCACAAGCAGCTTTaGCAGCCGCATCTGAAGACGAGCCAGAGCACTCAGGAAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: IKEETYKTNLYHKQL*QPHLKTSQSTQESS Trigger: AGAGCTTTCCTGAGTGCTCTGGCTCGTCTTCAGATGCGGCTGCAAAAGCTGCTTGTGGTACAGGTTGGTTTTGTATGTTTCTTCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CAA 90 bp | CTTTCGGAAGTGAGACAGGTCTTCCACTTGAACCTTGATGTTGTATaGATTGGCCAGAAGCTCAATGGCACCTTGCACCACATACTCATT | + |
|
Preference number: 2 (lower is better) Translates to: LSEVRQVFHLNLDVV*IGQKLNGTLHHILI Trigger: AATGAGTATGTGGTGCAAGGTGCCATTGAGCTTCTGGCCAATCAATACAACATCAAGGTTCAAGTGGAAGACCTGTCTCACTTCCGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CAA 90 bp | GAATGTGTCCATGAAAAGCTTTCGGAAGTGAGACAGGTCTTCCACTaGAACCTTGATGTTGTATTGATTGGCCAGAAGCTCAATGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: ECVHEKLSEVRQVFH*NLDVVLIGQKLNGT Trigger: GGTGCCATTGAGCTTCTGGCCAATCAATACAACATCAAGGTTCAAGTGGAAGACCTGTCTCACTTCCGAAAGCTTTTCATGGACACATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CAA 90 bp | GAGTTGGCCCTCATTGTAACAACTGAGATACTACTGATGGCAGTCTaGTTAATGCACCTTCTACCCTCGTCTGGGTTTTTGTTCTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: ELALIVTTEILLMAV*LMHLLPSSGFLFWS Trigger: TGACCAGAACAAAAACCCAGACGAGGGTAGAAGGTGCATTAACAAGACTGCCATCAGTAGTATCTCAGTTGTTACAATGAGGGCCAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACCCCAAAACACCGCGTGTGAGGAAAGCCTGCTATGTGGAAGAACTCAGAACTACCTAGACTGTTCTTaGAGTTTTCAAGCAATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SPQNTACEESLLCGRTQNYLDCS*SFQAIQ Trigger: CTGAATTGCTTGAAAACTTCAAGAACAGTCTAGGTA...GTTCTGAGTTCTTCCACATAGCAGGCTTTCCTCACACGCGGTGTTTTGGGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR GCA 90 bp | CCACATACTCATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACGCAAGAAGCTGCACCTaGAGCATAGGCAACATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PHTHSVSETVSKLNRQRDARSCT*SIGNIC Trigger: ACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGC...GTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATGAGTATGTGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAGTCCCTACTGCCTGCTGTTTGCAACTATCTTTAGATGTAATGGATGGTTTAGATGTAATGGATaGAGACAGGCCTTGGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: GSSPYCLLFATIFRCNGWFRCNG*RQALGY Trigger: GTATCCCAAGGCCTGTCTCCATCCATTACATCTAAA...CCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACGGGACTACATGTGTGTaGCCCAATCTCTTTGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: EVHRSKIDHEVWYYQLPNGTTCV*PNLFET Trigger: TGTTTCAAAGAGATTGGGTCACACACATGTAGTCCC...GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR TCA 90 bp | AAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGGCAGGATGGGAAGAAGCAGCAAAATTATTaGCCAATGCACCATACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KLTMRFGITSSPTWQDGKKQQNY*PMHHTS Trigger: AGAAGTATGGTGCATTGGTCAATAATTTTGCTGCTT...CTTCCCATCCTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACACCCTTGGCGGCTTCAGCTaGCACATAAACATAATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LFATIFRCNGWRQALGYTLGGFS*HINIIE Trigger: TTCTATTATGTTTATGTGTCAGCTGAAGCCGCCAAG...GGTGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTTACTTATTCCTTAAATTAGACCATGTGCCATATGGAGACACTTGGGGAGGCGCAGTCCCTACTGCCTaGTGTTTGCAACTATCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SYLFLKLDHVPYGDTWGGAVPTA*CLQLSL Trigger: TAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGC...GCCTCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAATAAGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR GCA 90 bp | CCACATACTCATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACAGCTCAATGGCACCTTaGACCACATACTCATTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PHTHSVSETVSKLNRQRDSSMAP*TTYSFC Trigger: ACAGAATGAGTATGTGGTGCAAGGTGCCATTGAGCT...GTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATGAGTATGTGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
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| 3UTR-3UTR CCA 90 bp | AATGCACCATACTTCTGCTCTGAGAGAAGACTAACACGGATTGATGGCCAAAGATTTAGATGTAATGGATaGAGACAGGCCTTGGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: NAPYFCSERRLTRIDGQRFRCNG*RQALGY Trigger: GTATCCCAAGGCCTGTCTCCATCCATTACATCTAAA...TCTTTGGCCATCAATCCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACTATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATTCTGGGTTTTTGTTCTaGTCAGAACATGCATTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ALWQPMQFAEVHRSKIDHSGFLF*SEHAFW Trigger: CCAGAATGCATGTTCTGACCAGAACAAAAACCCAGA...ATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGCACCATACTTCTGCTCTGAGAGAAGACTAACACGGATTGATGGCCAAAGAAAGAATGACTGCTATTaGCCAACAGTGAAGGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: NAPYFCSERRLTRIDGQRKNDCY*PTVKDL Trigger: CAAGTCCTTCACTGTTGGCCAATAGCAGTCATTCTT...TCTTTGGCCATCAATCCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACTATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATTCGTTGGGTTTCTATTaGTGTGATAAACACCATGAC | + |
|
Preference number: 2 (lower is better) Translates to: ALWQPMQFAEVHRSKIDHSLGFY*CDKHHD Trigger: GTCATGGTGTTTATCACATCAATAGAAACCCAACGA...ATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACAGAATTAAAGAAGAATaGCTGCTATTGGCCAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: EVHRSKIDHEVWYYQLPNRIKEE*LLLANS Trigger: ACTGTTGGCCAATAGCAGTCATTCTTCTTTAATTCT...GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATATTCCAGTTATTGACAAGGCACGCACACACACAGTTGACCATAAGCAATGTGGGTTGATTAAATaGAACTCACCAGTGTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: INIPVIDKARTHTVDHKQCGLIK*NSPVWE Trigger: CTCCCACACTGGTGAGTTCCATTTAATCAACCCACA...TTGCTTATGGTCAACTGTGTGTGTGCGTGCCTTGTCAATAACTGGAATATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCTTCCCAAATTTACAGCTTAAACTATGGGCTCATTCACAGATTCTGTCTTGCAGTCCCTACTGCCTaGTGTTTGCAACTATCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VSSQIYSLNYGLIHRFCLAVPTA*CLQLSL Trigger: TAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGC...AAGACAGAATCTGTGAATGAGCCCATAGTTTAAGCTGTAAATTTGGGAAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGATTCTGTCTTAATCCCTAATGGAGCAAGGGCCTTAGTAGAGGCTAAGAGAAATTTGGAGAGGAAATaGTTTGTTTCAGTTTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TDSVLIPNGARALVEAKRNLERK*FVSVSS Trigger: ACTGGAAACTGAAACAAACCATTTCCTCTCCAAATT...TCTCTTAGCCTCTACTAAGGCCCTTGCTCCATTAGGGATTAAGACAGAATCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCTTCCCAAATTTACAGCTTAAACTATGGGCTCATTCACAGATTCTGTCTTTTTAGATGTAATGGATaGAGACAGGCCTTGGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: VSSQIYSLNYGLIHRFCLFRCNG*RQALGY Trigger: GTATCCCAAGGCCTGTCTCCATCCATTACATCTAAA...AAGACAGAATCTGTGAATGAGCCCATAGTTTAAGCTGTAAATTTGGGAAGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CCA 72 bp | ACTTGGGGAGGCTGGCGGGCCTGTGGGTTGATTAAATaGAACTCACCAGTGTGGGAGGACTGGAGGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TWGGWRACGLIK*NSPVWEDWRPG Trigger: GCCAGGCCTCCAGTCCTCCCACACTGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCAGCCTCCCCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR TCA 72 bp | GGAGCAAGGAGGCAGCATCCATCAGGTAGTAGTCCATaGGACCCAGGCTGCCAAGTCTGGCAGGAGGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GARRQHPSGSSP*DPGCQVWQEES Trigger: GCTTTCCTCCTGCCAGACTTGGCAGCCTGGGTCTCATGGACTACTACCTGATGGATGCTGCCTCCTTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR GCA 72 bp | CCAGGAGCAGCACACAGATCAAGCACAGTGTCTCCATaGTGCAGACCAAGAGCCAGGACAGGGAGCAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PGAAHRSSTVSP*CRPRARTGSKE Trigger: CTCCTTGCTCCCTGTCCTGGCTCTTGGTCTGCAGCATGGAGACACTGTGCTTGATCTGTGTGCTGCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | CGGGCCTGTGGGTTGATTAAATGGAACTCACCAGTGTaGGAGGACTGGAGGCCTGGCTGGGCACTTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RACGLIKWNSPV*EDWRPGWALWR Trigger: TCTCCAAAGTGCCCAGCCAGGCCTCCAGTCCTCCCACACTGGTGAGTTCCATTTAATCAACCCACAGGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATCAAGCACAGTGTCTCCATGCTGCAGACCAAGAGCCAGGACAGGGAGAGTCCAGGGATGGAGTaGGAGAGAGGCCACTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQIKHSVSMLQTKSQDRESPGME*ERGHSQ Trigger: CTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGACT...CTCCCTGTCCTGGCTCTTGGTCTGCAGCATGGAGACACTGTGCTTGATCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR TCA 72 bp | ATGGAGACACTTGGGGAGGCTGGCGGGCCTGTGGGTTaGTTAAATGGAACTCACCAGTGTGGGAGGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: METLGEAGGPVG*LNGTHQCGRTG Trigger: TCCAGTCCTCCCACACTGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCAGCCTCCCCAAGTGTCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CCA 72 bp | GCATCGAAGATTTGGGCTGCAGTCCAGGGATGGAGTTaGAGAGAGGCCACTCTCAGGCTCCAGTTTCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ASKIWAAVQGWS*REATLRLQFLV Trigger: CACCAGAAACTGGAGCCTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGACTGCAGCCCAAATCTTCGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR TCA 72 bp | GTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATaGGGTAACTCGGACTTGGTTCCCTTCCCTAATATC | + |
|
Preference number: 3 (lower is better) Translates to: VPLQFSPLPAIP*GNSDLVPFPNI Trigger: GATATTAGGGAAGGGAACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR TCA 72 bp | AGGTCGTTGGCAGCTAGATTACGGCAACAACCCGTCTaGAGTAATGCCAGCGTTTTGCCCCCAGGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSLAARLRQQPV*SNASVLPPGAA Trigger: TGCTGCTCCTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTTGTTGCCGTAATCTAGCTGCCAACGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR GCA 72 bp | TTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACCTaGAGCATAGGCAACATCTGTCGCTCCTTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVARSPAARSCT*SIGNICRSFFL Trigger: AAGGAAGAAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR TCA 72 bp | CCAACCTGTACCACAAGCAGCTTTTGCAGCCGCATCTaGAGACGAGCCAGAGCACTCAGGAAAGCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTCTTSSFCSRI*RRARALRKALS Trigger: AGAGAGAGCTTTCCTGAGTGCTCTGGCTCGTCTTCAGATGCGGCTGCAAAAGCTGCTTGTGGTACAGGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CCA 72 bp | GTGAGCAAGTTGAATAGACAACGTGACCTCCTGGTTTaGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VSKLNRQRDLLV*WQGVQPQEAAP Trigger: AGGTGCAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTATTCAACTTGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | AGTGAAGCATCGAAGATTTGGGCTGCAGTCCAGGGATaGAGTTGGAGAGAGGCCACTCTCAGGCTCCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SEASKIWAAVQG*SWREATLRLQF Trigger: AAACTGGAGCCTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGACTGCAGCCCAAATCTTCGATGCTTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | TTAGACCATGTGCCATATGGAGACACTTGGGGAGGCTaGCGGGCCTGTGGGTTGATTAAATGGAACTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LDHVPYGDTWGG*RACGLIKWNSP Trigger: TGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCAGCCTCCCCAAGTGTCTCCATATGGCACATGGTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGGAGTTGGAGAGAGGCCACTCTCAGGCTCCAGTTTCTGGTGAGAGATGGCCCTTCCCTAATATCTaGAGGCACATAACTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GMELERGHSQAPVSGERWPFPNI*RHITVK Trigger: CTTCACAGTTATGTGCCTCAAGATATTAGGGAAGGG...CCATCTCTCACCAGAAACTGGAGCCTGAGAGTGGCCTCTCTCCAACTCCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGACAACGTGACCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCTACTGATGGCAGTCTaGTTAATGCACCTTCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: IDNVTSWFGGKESSRKKLLLMAV*LMHLLP Trigger: GGGTAGAAGGTGCATTAACAAGACTGCCATCAGTAG...CAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGTGGCGGGCCTGTGGGTaGATTAAATGGAACTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LSFNGVITFLLQGQGGTMWRACG*IKWNSP Trigger: TGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCA...CATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR CAA 90 bp | ATAGACAACGTGACCTCCTGGTTTGGTGGCAAGGAGTCCAGCCGCAAGAAGCTGCCCTTCCCTAATATCTaGAGGCACATAACTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IDNVTSWFGGKESSRKKLPFPNI*RHITVK Trigger: CTTCACAGTTATGTGCCTCAAGATATTAGGGAAGGG...CAGCTTCTTGCGGCTGGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | ACTGGAGGCCTGGCTGGGCACTTTGGAGAGTGTGCTTaGCGGCTTCAGCTGACACATAAACATAATAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TGGLAGHFGECA*RLQLTHKHNRT Trigger: AGTTCTATTATGTTTATGTGTCAGCTGAAGCCGCCAAGCACACTCTCCAAAGTGCCCAGCCAGGCCTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CCA 72 bp | TCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATaGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSPSYFRDRVAL*QPMQFAEVHRS Trigger: GGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGTCACTGACGAAGTCCTaGGCACTCAGCTGCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: YGSLCSLQKYIGPKLTMRSLTKS*ALSCSS Trigger: GCTGGAGCAGCTGAGTGCCAAGGACTTCGTCAGTGA...CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR GCA 72 bp | CCTACTTCAGGGACAGGGTGGCACTATGGCAGCCTATaGAGTTTGCAGAAGTACATAGGTCCAAAATTGACC | + |
|
Preference number: 3 (lower is better) Translates to: PTSGTGWHYGSL*SLQKYIGPKLT Trigger: GGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | TTCCTTAAATTAGACCATGTGCCATATGGAGACACTTaGGGAGGCTGGCGGGCCTGTGGGTTGATTAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: FLKLDHVPYGDT*GGWRACGLIKW Trigger: CCATTTAATCAACCCACAGGCCCGCCAGCCTCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCCCACTTCCTGCCATCCCATGAGGTAACTCGGACTTGGTTCCCTTCCCTAATCTCTTTGAAACACTaGTGTCTTCTCGTTGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPHFLPSHEVTRTWFPSLISLKH*CLLVGF Trigger: AAACCCAACGAGAAGACACAAGTGTTTCAAAGAGAT...TAGGGAAGGGAACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAGTGGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGAGACAGTGAGCAAGTaGAATAGACAACGTGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSFNGVITFLLQGQGGTMETVSK*NRQRDL Trigger: GAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTC...CATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGAAGCTCAATGGCACCTaGCACCACATACTCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSFNGVITFLLQGQGGTMKLNGT*HHILIL Trigger: CAGAATGAGTATGTGGTGCAAGGTGCCATTGAGCTT...CATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGATGTGCAGATGAGCGGCAGCCTATGCAGTTaGCAGAAGTACATAGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RKACYVEELRTLEDVQMSGSLCS*QKYIGP Trigger: TGGACCTATGTACTTCTGCAAACTGCATAGGCTGCC...GCTCATCTGCACATCCTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR TCA 72 bp | GCAAGGGCCTTAGTAGAGGCTAAGAGACATGAGACATaGGTTAGAAACCTGCTGATAATCCAGAGCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ARALVEAKRHET*VRNLLIIQSWA Trigger: TGCCCAGCTCTGGATTATCAGCAGGTTTCTAACTCATGTCTCATGTCTCTTAGCCTCTACTAAGGCCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR GCA 72 bp | CCTGCTGATAATCCAGAGCTGGGCAGCAGTCCCTACTaGCTGCTGTTTGCAACTATCTTTAGATGTAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PADNPELGSSPY*LLFATIFRCNG Trigger: TCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCCCAGCTCTGGATTATCAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CCA 72 bp | TGTTGTTCTCTTCCTCATGAAGGGAATGGCGGTCCGTaGTACATGGCACATCTACTAACACCCTATCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: CCSLPHEGNGGP*YMAHLLTPYHR Trigger: CCTATGATAGGGTGTTAGTAGATGTGCCATGTACCACGGACCGCCATTCCCTTCATGAGGAAGAGAACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | GAGGTTTGGTATTACCAGCTCCCCAACCTGGCAGGATaGGAAGAAACAGAATGTGTCCATGAAAAGCTTTCG | + |
|
Preference number: 3 (lower is better) Translates to: EVWYYQLPNLAG*EETECVHEKLS Trigger: CGAAAGCTTTTCATGGACACATTCTGTTTCTTCCCATCCTGCCAGGTTGGGGAGCTGGTAATACCAAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | GCAGAAGTACATAGGTCCAAAATTGACCATGAGGTTTaGTATTACCAGCTCCCCAACCTGGCAGGATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AEVHRSKIDHEV*YYQLPNLAGWE Trigger: TTCCCATCCTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTACTTATTCCTTAAATTAGACCATGTGCCATATGGAGACACTTGGGGAGGCTGGCGGGCCTGTGGGTaGATTAAATGGAACTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: SYLFLKLDHVPYGDTWGGWRACG*IKWNSP Trigger: TGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCA...GCCTCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAATAAGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCAGATGAGCCAAAGCAGGCGCCAGAGCTGGGCCACAGACTAGAAATAAAATGGAGAGGAAATGGTTaGTTTCAGTTTCCAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CADEPKQAPELGHRLEIKWRGNG*FQFPVL Trigger: AAGAACTGGAAACTGAAACAAACCATTTCCTCTCCA...TTTTATTTCTAGTCTGTGGCCCAGCTCTGGCGCCTGCTTTGGCTCATCTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR CAA 90 bp | TATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGGGCAGCCTATGCAGTTaGCAGAAGTACATAGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YGSLCSLQKYIGPKLTMRGSLCS*QKYIGP Trigger: TGGACCTATGTACTTCTGCAAACTGCATAGGCTGCC...CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR TCA 72 bp | GCTTTCGGAAGTGAGACAGGTCTTCCACTTGAACCTTaGTGTTGTATTGATTGGCCAGAAGCTCAATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AFGSETGLPLEP*CCIDWPEAQWH Trigger: GTGCCATTGAGCTTCTGGCCAATCAATACAACATCAAGGTTCAAGTGGAAGACCTGTCTCACTTCCGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| 3UTR GCA 72 bp | CTGATAATCCAGAGCTGGGCAGCAGTCCCTACTGCCTaGTGTTTGCAACTATCTTTAGATGTAATGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: LIIQSWAAVPTA*CLQLSLDVMDG Trigger: TCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCCCAGCTCTGGATTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CCA 72 bp | GATGGCAGTCTTGTTAATGCACCTTCTACCCTCGTCTaGGTTTTTGTTCTGGTCAGAACATGCATTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DGSLVNAPSTLV*VFVLVRTCILV Trigger: GACCAGAATGCATGTTCTGACCAGAACAAAAACCCAGACGAGGGTAGAAGGTGCATTAACAAGACTGCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CCA 72 bp | CAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTaGGATACACCTGCCACTAGCCTCAGTTTCAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: QLSLDVMDGDRP*DTPATSLSFNG Trigger: TCCATTGAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 ENSMUST00000165493.8 |
||
| 3UTR TCA 72 bp | TGGCAGCTAGATTACCTGTGGTACCTAGACTGTTCTTaGAGTTTTCAAGCAATTCAGTTTCAGCCTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WQLDYLWYLDCS*SFQAIQFQPPE Trigger: CTCAGGAGGCTGAAACTGAATTGCTTGAAAACTTCAAGAACAGTCTAGGTACCACAGGTAATCTAGCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACTGTGACCCAATCTCTTaGAAACACTTGTGTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EVHRSKIDHEVWYYQLPNCDPIS*KHLCLL Trigger: GAGAAGACACAAGTGTTTCAAAGAGATTGGGTCACA...GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR GCA 72 bp | CAAGCAGCAAAATTATTGACCAATGCACCATACTTCTaGTCTGAGAGAAGACTAACACGGATTGATGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QAAKLLTNAPYF*SERRLTRIDGQ Trigger: TTGGCCATCAATCCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATTGGTCAATAATTTTGCTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGGTACCTAGACTGTTCTaGAAGTTTTCAAGCAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: VHRSKIDHEVWYYQLPNLVPRLF*KFSSNS Trigger: TGAATTGCTTGAAAACTTCAAGAACAGTCTAGGTAC...CAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| 3UTR-3UTR CAA 90 bp | CATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACCTCCTGGTTCAAGCAGCAAAATTATaGACCAATGCACCATACTTC | + |
|
Preference number: 3 (lower is better) Translates to: HSVSETVSKLNRQRDLLVQAAKL*TNAPYF Trigger: GAAGTATGGTGCATTGGTCAATAATTTTGCTGCTTG...AACCAGGAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR TCA 72 bp | GTTTACTGTTTCCTGGCTCTAAACGTTGCTTTGTTCTaGCAAGTGTTACAAAACAATCAGCACGCAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VYCFLALNVALF*QVLQNNQHASH Trigger: GTGACTTGCGTGCTGATTGTTTTGTAACACTTGTCAGAACAAAGCAACGTTTAGAGCCAGGAAACAGTAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CCA 72 bp | GATGAAAAGAATGGTAATAAAGGAGGGATACAAAAGTaGGAAGAGCCAATAAATATTCCAGTTATTGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: DEKNGNKGGIQK*EEPINIPVIDK Trigger: CTTGTCAATAACTGGAATATTTATTGGCTCTTCCCACTTTTGTATCCCTCCTTTATTACCATTCTTTTCATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | CCCTATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATGAGGCCTCTCCGGTGGGGGTaGGGAGGAGAGGACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PYHRCPPPVLPTSCHPMRPLRWG*GGEDWG Trigger: CCCCCAGTCCTCTCCTCCCCACCCCCACCGGAGAGG...CCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGACACCTATGATAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGGCAGTCTTGTTAATGCACCTTCTACCCTCGTCTGGGTTTTTGTTCTGGGCGGAGGGGGCGGGGTaGGGATCCGTCGAGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LMAVLLMHLLPSSGFLFWAEGAG*GSVEVS Trigger: GCTTACCTCGACGGATCCCCACCCCGCCCCCTCCGC...CCAGAACAAAAACCCAGACGAGGGTAGAAGGTGCATTAACAAGACTGCCATCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | TTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCGGCTTCTGGAGAGCCTaGGGCAGGGATGAGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNGVITFLLQGQGGTMAAGFWRA*GRDELG Trigger: TCCTAGCTCATCCCTGCCTCAGGCTCTCCAGAAGCC...GGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | CCCTATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATGAGGTGGGAGCAGAATAAGTaGCACAAGGGAGAACCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PYHRCPPPVLPTSCHPMRWEQNK*HKGEPQ Trigger: CTGCGGTTCTCCCTTGTGGCACTTATTCTGCTCCCA...CCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGACACCTATGATAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | CGAGCCAGAGCACTCAGGAAAGCTCTCTCTGTAAGAGGATCATCAGCCACAGGCGTCCAGGGATGGAGTTaGAGAGAGGCCACTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RARALRKALSVRGSSATGVQGWS*REATLR Trigger: CCTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGAC...GCCTGTGGCTGATGATCCTCTTACAGAGAGAGCTTTCCTGAGTGCTCTGGCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCCAGCCGCAAGAAGCTGCACCTGCAGCATAGGCAACATCTGTCGCTCCTTCCTCTTGAGGTGAGATaGGAGAGCCAGACATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESSRKKLHLQHRQHLSLLPLEVR*ESQTCL Trigger: CAGGCATGTCTGGCTCTCCCATCTCACCTCAAGAGG...AAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGCGGCTGGACTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CAA 72 bp | TATGGAGACACTTGGGGAGGCTGGCGGGCCTGTGGGTaGATTAAATGGAACTCACCAGTGTGGGAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGDTWGGWRACG*IKWNSPVWEDW Trigger: CCAGTCCTCCCACACTGGTGAGTTCCATTTAATCAACCCACAGGCCCGCCAGCCTCCCCAAGTGTCTCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | CCCTATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTCCTGCCATCCCATGAGGGGAGGGCATGAACGCTaGGATTCTGGGGAATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: PYHRCPPPVLPTSCHPMRGGHER*DSGESI Trigger: TATTGATTCCCCAGAATCTCAGCGTTCATGCCCTCC...CCTCATGGGATGGCAGGAAGTGGGGAGAACTGGAGGGGGACACCTATGATAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGCACTCAGGAAAGCTCTCTCTGTAAGAGGATCATCAGCCACAGGCTCAGTCCAGGGATGGAGTTaGAGAGAGGCCACTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARALRKALSVRGSSATGSVQGWS*REATLR Trigger: CCTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGAC...TGAGCCTGTGGCTGATGATCCTCTTACAGAGAGAGCTTTCCTGAGTGCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CAA 72 bp | AGCATCGAAGATTTGGGCTGCAGTCCAGGGATGGAGTaGGAGAGAGGCCACTCTCAGGCTCCAGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIEDLGCSPGME*ERGHSQAPVSG Trigger: ACCAGAAACTGGAGCCTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGACTGCAGCCCAAATCTTCGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGCACTCAGGAAAGCTCTCTCTGTAAGAGGATCATCAGCCACAGGCTCATCAGGTAGTAGTCCATaGGACCCAGGCTGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARALRKALSVRGSSATGSSGSSP*DPGCQV Trigger: GACTTGGCAGCCTGGGTCTCATGGACTACTACCTGA...TGAGCCTGTGGCTGATGATCCTCTTACAGAGAGAGCTTTCCTGAGTGCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | CGGCTGACGTCCCCTCTGGAAAAAGTGAAGCATCGAAGATTTGGGCTGCAGTCCTTAGGGCAGTCTGCTTaGGGTGAAGTTGAAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLTSPLEKVKHRRFGLQSLGQSA*GEVEGA Trigger: AGCCCCTTCAACTTCACCTCAAGCAGACTGCCCTAA...GGACTGCAGCCCAAATCTTCGATGCTTCACTTTTTCCAGAGGGGACGTCAGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | GATGTAATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCAGCCTGAGGCAGGGATaGGCTAGGAGAACCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: DVMDGDRPWDTPATSLSFSLRQG*ARRTST Trigger: AGTGCTGGTTCTCCTAGCTCATCCCTGCCTCAGGCT...GAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | AACCCGTCTGAAGTAATGCCAGCGTTTTGCCCCCAGGAGCAGCACACAGATCAAACACTGAGGAAGAGGTaGTCCTGTGGTGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPSEVMPAFCPQEQHTDQTLRKR*SCGAGR Trigger: CCTTCCTGCACCACAGGACCACCTCTTCCTCAGTGT...TTGATCTGTGTGCTGCTCCTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGATGAGCCAAAGCAGGCGCCAGAGCTGGGCCACAGACTAGAAATAAAAGGCTCCAGTTTCTGGTaGGAGATGGCTTCACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: CADEPKQAPELGHRLEIKGSSFW*EMASLT Trigger: CGTCAGTGAAGCCATCTCTCACCAGAAACTGGAGCC...TTTTATTTCTAGTCTGTGGCCCAGCTCTGGCGCCTGCTTTGGCTCATCTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | CCTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATCAGGAGGAAAGCGGCTaGCGTCCCCTCTGGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQFQWSHHLPTSGTGWHYQEESG*RPLWKK Trigger: CTTTTTCCAGAGGGGACGTCAGCCGCTTTCCTCCTG...ATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| CDS-3UTR TCA 90 bp | ATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCAATGGACTTCCTGCCATCCCATaGGGTAACTCGGACTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MDGDRPWDTPATSLSFNGLPAIP*GNSDLV Trigger: AACCAAGTCCGAGTTACCTCATGGGATGGCAGGAAG...TCCATTGAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | TTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCCTCTCATTACGGTCCTaGGTACTGCTTTGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNGVITFLLQGQGGTMAALSLRS*VLLWRG Trigger: TCCTCTCCAAAGCAGTACTCAGGACCGTAATGAGAG...GGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGTTCTCTTCCTCATGAAGGGAATGGCGGTCCGTGGTACATGGCACATCTATGTCGTGGTAAGGGTTaGCAGAGGGTGGGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CCSLPHEGNGGPWYMAHLCRGKG*QRVGKM Trigger: CATCTTCCCCACCCTCTGGCAACCCTTACCACGACA...TAGATGTGCCATGTACCACGGACCGCCATTCCCTTCATGAGGAAGAGAACAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | TTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCGAGGTGGTCCTGTGGTaGAGGAAGGACCAGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FNGVITFLLQGQGGTMAAEVVLW*RKDQKL Trigger: TAATTTCTGGTCCTTCCTGCACCACAGGACCACCTC...GGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | CGGCTGACGTCCCCTCTGGAAAAAGTGAAGCATCGAAGATTTGGGCTGCAGTCCAGGTTCACAAGAGTTTaGAGGCATAGGGTTGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLTSPLEKVKHRRFGLQSRFTRV*RHRVVV Trigger: CACGACAACCCTATGCCTCCAAACTCTTGTGAACCT...GGACTGCAGCCCAAATCTTCGATGCTTCACTTTTTCCAGAGGGGACGTCAGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCAAGAATAGATGTGGGTaGAACAAGGAGGCGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FNGVITFLLQGQGGTMAAKNRCG*NKEAPQ Trigger: CTGTGGCGCCTCCTTGTTCCACCCACATCTATTCTT...GGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGGCAGGTGAGCAAGGGGAGGTaGAATTGCAAGGCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGPKLTMRFGITSSPTWQVSKGR*NCKARS Trigger: AGACCTGGCCTTGCAATTTCACCTCCCCTTGCTCAC...CTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACACATTTGAGGGGGAGCTaGGGTAGGAGGGCGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLQLSLDVMDGDRPWDTHLRGS*GRRAGF Trigger: GAACCCCGCCCTCCTACCTCAGCTCCCCCTCAAATG...TGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGGCAGCTCCGACTTCTGCTCTaGAAGGCACCCCTTCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGPKLTMRFGITSSPTWQLRLLL*KAPLLR Trigger: CCTAAGAAGGGGTGCCTTTCAGAGCAGAAGTCGGAG...CTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGATGTGCAGATGAGCAGCACAGTGTCTCCATaGTGCAGACCAAGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKACYVEELRTLEDVQMSSTVSP*CRPRAR Trigger: CCTGGCTCTTGGTCTGCAGCATGGAGACACTGTGCT...GCTCATCTGCACATCCTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | GATGTAATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCGCAAGAAGCTGCACCTaGAGCATAGGCAACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVMDGDRPWDTPATSLSFARSCT*SIGNIC Trigger: ACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGC...GAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | GCCTGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATTCCGGCTCCGACTTCTaGTCTGAAAGGCACCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACCLQLSLDVMDGDRPWDSGSDF*SERHPF Trigger: GAAGGGGTGCCTTTCAGAGCAGAAGTCGGAGCCGGA...ATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | GATGTAATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCTGGCCAGAAGCTCAATaGCACCTTGCACCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: DVMDGDRPWDTPATSLSFWPEAQ*HLAPHT Trigger: AGTATGTGGTGCAAGGTGCCATTGAGCTTCTGGCCA...GAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGATGTGCAGATGAGCACCAGCTCCCCAACCTaGCAGGATGGGAAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RKACYVEELRTLEDVQMSTSSPT*QDGKKQ Trigger: CTGTTTCTTCCCATCCTGCCAGGTTGGGGAGCTGGT...GCTCATCTGCACATCCTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGGTCTCAGGGGCCGATaGGTAAGAAGAGGTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LSFNGVITFLLQGQGGTMGLRGR*VRRGEM Trigger: CATTTCACCTCTTCTTACCCATCGGCCCCTGAGACC...CATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAAGCTGCACCTGCAGCATAGGCAACATCTGTCGCTCCTTCTTCCTTGACCTAGGGGCAGATATCTaGGAATCTGGGCATAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSCTCSIGNICRSFFLDLGADI*ESGHKW Trigger: CCATTTATGCCCAGATTCCCAGATATCTGCCCCTAG...GTCAAGGAAGAAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGATTACGGCAACAACCCGTCTGAAGTAATGCCAGCGTTTTGCCCCCAGGTTGTTCAGGGGAGATaGGAAATACGGGGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QLDYGNNPSEVMPAFCPQVVQGR*EIRGRI Trigger: AATCCTTCCCCGTATTTCCCATCTCCCCTGAACAAC...CTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTTGTTGCCGTAATCTAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCAGTCTTGTTAATGCACCTTCTACCCTCGTCTGGGTTTTTGTTCTGGGAAGGATTAGGACACTaGGGAAGAGGTGGTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LMAVLLMHLLPSSGFLFWEGLGH*GRGGPV Trigger: CACAGGACCACCTCTTCCTCAGTGTCCTAATCCTTC...CCAGAACAAAAACCCAGACGAGGGTAGAAGGTGCATTAACAAGACTGCCATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | GATACACCTGCCACTAGCCTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGTGGGAGAGCCAGACATaGCTGCCTGAGAAGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DTPATSLSFNGVITFLLQWESQT*LPEKKV Trigger: CACTTTCTTCTCAGGCAGGCATGTCTGGCTCTCCCA...CTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAGGCTAGTGGCAGGTGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGTTTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGTACGGTCCTGAGTACTaGTTTGGAGAGGACTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFNGVITFLLQGQGGTMYGPEY*FGEDYC Trigger: GCAGTAGTCCTCTCCAAAGCAGTACTCAGGACCGTA...CATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAAACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGATGAGCCAAAGCAGGCGCCAGAGCTGGGCCACAGACTAGAAATAAAAACTGGCCGTGAATTGTaGTTCTGTGGTAGCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CADEPKQAPELGHRLEIKTGREL*FCGSPF Trigger: AAATGGGCTACCACAGAACCACAATTCACGGCCAGT...TTTTATTTCTAGTCTGTGGCCCAGCTCTGGCGCCTGCTTTGGCTCATCTGCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | AAAACACCGCGTGTGAGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGAAGCATCGAAGATTTaGGCTGCAGTCCAGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KTPRVRKACYVEELRTLEEASKI*AAVQGW Trigger: CCATCCCTGGACTGCAGCCCAAATCTTCGATGCTTC...CTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCTCACACGCGGTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | TTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCTCTGTTGCCTGCATTTaGAGAAAGGCCAGCATTACA | + |
|
Preference number: 4 (lower is better) Translates to: FNGVITFLLQGQGGTMAASVACI*RKASIT Trigger: TGTAATGCTGGCCTTTCTCCAAATGCAGGCAACAGA...GGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | AAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGGCAGGATGGGAAGGTGATTCAGGGGATTTaGGGGACTTCATTTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLTMRFGITSSPTWQDGKVIQGI*GTSFEG Trigger: CCCCTCAAATGAAGTCCCCCAAATCCCCTGAATCAC...CTTCCCATCCTGCCAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CAA 72 bp | ATCCAGAGCTGGGCAGCAGTCCCTACTGCCTGCTGTTaGCAACTATCTTTAGATGTAATGGATGGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQSWAAVPTACC*QLSLDVMDGDR Trigger: CCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCCCAGCTCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| 3UTR CAA 72 bp | TCAGGGACAGGGTGGCACTATGGCAGCCTATGCAGTTaGCAGAAGTACATAGGTCCAAAATTGACCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTGWHYGSLCS*QKYIGPKLTMR Trigger: CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | GATGTAATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCTTCTTCCTTGACCGCTaGAAGATGTTGTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVMDGDRPWDTPATSLSFFFLDR*KMLFSS Trigger: GGAAGAGAACAACATCTTTCAGCGGTCAAGGAAGAA...GAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | TGTTGTTCTCTTCCTCATGAAGGGAATGGCGGTCCGTGGTACATGGCACATCTAACGGAGAAGAAATGGTaGGGCAAGAGAAAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCSLPHEGNGGPWYMAHLTEKKW*GKRKVL Trigger: GAGAACCTTTCTCTTGCCTCACCATTTCTTCTCCGT...TAGATGTGCCATGTACCACGGACCGCCATTCCCTTCATGAGGAAGAGAACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACACAGCCCTCTTGAGGTaGGATGGGAGAGCCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSKIDHEVWYYQLPNTALLR*DGRARH Trigger: ATGTCTGGCTCTCCCATCTCACCTCAAGAGGGCTGT...GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | TTCAATGGAGTCATCACCTTCCTACTTCAGGGACAGGGTGGCACTATGGCAGCCAATACATATGAGTATTaGAGGGGGAAACTGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNGVITFLLQGQGGTMAANTYEY*RGKLEV Trigger: CACCTCCAGTTTCCCCCTGCAATACTCATATGTATT...GGCTGCCATAGTGCCACCCTGTCCCTGAAGTAGGAAGGTGATGACTCCATTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACAGCTGCAGTCCAGGGATaGAGTTGGAGAGAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CCLQLSLDVMDGDRPWDTAAVQG*SWREAT Trigger: AGTGGCCTCTCTCCAACTCCATCCCTGGACTGCAGC...TGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | GCACTATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGAGATGGCTTCACTaGCGAAGTCCTTGGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALWQPMQFAEVHRSKIDHERWLH*RSPWHS Trigger: TGAGTGCCAAGGACTTCGTCAGTGAAGCCATCTCTC...ATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAGCAAGTTGAATAGACAACGTGACCTCCTGGTTTGGTGGCAAGGAGTCTTTTGGGCAGGAATTTaGAGTAGTTGTGATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSKLNRQRDLLVWWQGVFWAGI*SSCDGW Trigger: CCAGCCATCACAACTACTTCAAATTCCTGCCCAAAA...GACTCCTTGCCACCAAACCAGGAGGTCACGTTGTCTATTCAACTTGCTCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCAATGGAACCACAGAATACATATaGGTATTGCAGGGGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: MDGDRPWDTPATSLSFNGTTEYI*VLQGET Trigger: AGTTTCCCCCTGCAATACTCATATGTATTCTGTGGT...TCCATTGAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | GTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGCCCACACTTTTCCTATaGTGGAGACTCTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHRSKIDHEVWYYQLPNLPTLFL*WRLLLW Trigger: CCAGAGCAAGAGTCTCCAGCATAGGAAAAGTGTGGG...CAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGGAAGCATCGAAGATTTaGGCTGCAGTCCAGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YGSLCSLQKYIGPKLTMREASKI*AAVQGW Trigger: CCATCCCTGGACTGCAGCCCAAATCTTCGATGCTTC...CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030474.12 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATTCTGAAGATGAGGAAATCCAACTATTTACCATGGTCCCAACCATCTGACAACGTGACCTCCTaGTTTGGTGGCAAGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAILKMRKSNYLPWSQPSDNVTS*FGGKES Trigger: GGACTCCTTGCCACCAAACCAGGAGGTCACGTTGTC...AGATGGTTGGGACCATGGTAAATAGTTGGATTTCCTCATCTTCAGAATGGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | GTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACCTGATTTCCCTGGGACCCTaGCATAAGGGGAGTCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VHRSKIDHEVWYYQLPNLISLGP*HKGSRN Trigger: ATTTCGACTCCCCTTATGCCAGGGTCCCAGGGAAAT...CAGGTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACAGCCCTCGGTGAGAAATaGATGCAGGGGTTAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLQLSLDVMDGDRPWDTALGEK*MQGLEV Trigger: GACCTCTAACCCCTGCATCCATTTCTCACCGAGGGC...TGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACCTCCTGGTTTGGCTAGGAGGAGTGTaGTGGGGTGTATTGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVSETVSKLNRQRDLLVWLGGV*WGVLSR Trigger: CCTAGACAATACACCCCACCACACTCCTCCTAGCCA...AACCAGGAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TACTTCAGGGACAGGGTGGCACTATGGCAGCCTATGCAGTTTGCAGAAGTACATTTATGGGATTTAGAATaGCTAGGAGGAGTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YFRDRVALWQPMQFAEVHLWDLE*LGGVWW Trigger: CCACCACACTCCTCCTAGCCATTCTAAATCCCATAA...ATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGCCACCCTGTCCCTGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | ATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCAATGGAAGTAGTTGTGATGGCTaGCTCCATACATGGACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MDGDRPWDTPATSLSFNGSSCDG*LHTWTK Trigger: TTTAGTCCATGTATGGAGCCAGCCATCACAACTACT...TCCATTGAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | AATGCACCATACTTCTGCTCTGAGAGAAGACTAACACGGATTGATGGCCAAAGACCATCTGCAGGACTCTaGCTTTGCTTCCGACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NAPYFCSERRLTRIDGQRPSAGL*LCFRLL Trigger: GAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGATGG...TCTTTGGCCATCAATCCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | AAAACACCGCGTGTGAGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGAAGACTAACACGGATTaGTGGCCAAAGATCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTPRVRKACYVEELRTLEKTNTD*WPKIPK Trigger: TTTGGGGATCTTTGGCCATCAATCCGTGTTAGTCTT...CTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCTCACACGCGGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGATGTGCAGATGAGCACCATACTTCTGCTCTaGGAGAAGACTAACACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKACYVEELRTLEDVQMSTILLL*EKTNTD Trigger: ATCCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGT...GCTCATCTGCACATCCTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACAGAGAGATGGCTTCACTaGCGAAGTCCTTGGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: CCLQLSLDVMDGDRPWDTERWLH*RSPWHS Trigger: TGAGTGCCAAGGACTTCGTCAGTGAAGCCATCTCTC...TGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTACTTATTCCTTAAATTAGACCATGTGCCATATGGAGACACTTGGGGACAGGAGGAAAGCGGCTaGCGTCCCCTCTGGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFLKLDHVPYGDTWGQEESG*RPLWKK Trigger: CTTTTTCCAGAGGGGACGTCAGCCGCTTTCCTCCTG...TCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAATAAGTAACTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | AGTTACTTATTCCTTAAATTAGACCATGTGCCATATGGAGACACTTGGGGAGGCTTGTTCTCTTCCTCATaGAGGGAATGGCGGTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SYLFLKLDHVPYGDTWGGLFSSS*REWRSV Trigger: CACGGACCGCCATTCCCTTCATGAGGAAGAGAACAA...GCCTCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAATAAGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | ACAGATTCTGTCTTAATCCCTAATGGAGCAAGGGCCTTAGTAGAGGCTAAGAGAGTCATGTCAAAATTCTaGAGAGCAAGCCGACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDSVLIPNGARALVEAKRVMSKF*RASRLA Trigger: GGCCAGTCGGCTTGCTCTGCAGAATTTTGACATGAC...TCTCTTAGCCTCTACTAAGGCCCTTGCTCCATTAGGGATTAAGACAGAATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | CACTTTGGAGAGTGTGCTTGGCGGCTTCAGCTGACACATAAACATAATAGAACTATCGAAGATTTGGGCTaGAGTCCAGGGATGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFGECAWRLQLTHKHNRTIEDLG*SPGMEL Trigger: CAACTCCATCCCTGGACTGCAGCCCAAATCTTCGAT...AGTTCTATTATGTTTATGTGTCAGCTGAAGCCGCCAAGCACACTCTCCAAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | CTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACACCATCGAAGATTTGGGCTaGAGTCCAGGGATGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFATIFRCNGWRQALGYTIEDLG*SPGMEL Trigger: CAACTCCATCCCTGGACTGCAGCCCAAATCTTCGAT...GGTGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | ATGGCACATCTACTAACACCCTATCATAGGTGTCCCCCTCCAGTTCTCCCCACTTATGCTGGAGACTCTTaGTCTGGCTTTCAATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MAHLLTPYHRCPPPVLPTYAGDS*SGFQFY Trigger: GTAAAATTGAAAGCCAGAGCAAGAGTCTCCAGCATA...AGTGGGGAGAACTGGAGGGGGACACCTATGATAGGGTGTTAGTAGATGTGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGCTCATTCACAGATTCTGTCTTAATCCCTAATGGAGCAAGGGCCTTAGTACCCAACCTGGCAGGATaGGAAGAAACAGAATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MGSFTDSVLIPNGARALVPNLAG*EETECV Trigger: GACACATTCTGTTTCTTCCCATCCTGCCAGGTTGGG...TACTAAGGCCCTTGCTCCATTAGGGATTAAGACAGAATCTGTGAATGAGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | CCACATACTCATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACGAGAGTGGGGATAAATaGGAGGTGGGAGGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PHTHSVSETVSKLNRQRDESGDK*EVGGTT Trigger: TGTGGTTCCTCCCACCTCCCATTTATCCCCACTCTC...GTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATGAGTATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACAGGAGGGATTGTTCAGTaGGACTGGAGAAGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CCLQLSLDVMDGDRPWDTGGIVQ*DWRSHS Trigger: GCTGTGACTTCTCCAGTCCCACTGAACAATCCCTCC...TGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | ATAAATATTCCAGTTATTGACAAGGCACGCACACACACAGTTGACCATAAGCAAGGCTCCAGTTTCTGGTaGGAGATGGCTTCACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: INIPVIDKARTHTVDHKQGSSFW*EMASLT Trigger: CGTCAGTGAAGCCATCTCTCACCAGAAACTGGAGCC...TTGCTTATGGTCAACTGTGTGTGTGCGTGCCTTGTCAATAACTGGAATATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGATGTGCAGATGAGCCTTCCACTTGAACCTTaGTGTTGTATTGATTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKACYVEELRTLEDVQMSLPLEP*CCIDWP Trigger: TGGCCAATCAATACAACATCAAGGTTCAAGTGGAAG...GCTCATCTGCACATCCTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | CTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACACCAAAACAAGGAGAGGATaGACCAGCTGGCTCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFATIFRCNGWRQALGYTKTRRG*TSWLLS Trigger: AGACAAGAGCCAGCTGGTTCATCCTCTCCTTGTTTT...GGTGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTAACGTCCTTCTCAATGGATACTTTTAATACTCAAATAGGATTAGCAGGGGCTGCAGTCCAGGGATaGAGTTGGAGAGAGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLTSFSMDTFNTQIGLAGAAVQG*SWREAT Trigger: AGTGGCCTCTCTCCAACTCCATCCCTGGACTGCAGC...CCCTGCTAATCCTATTTGAGTATTAAAAGTATCCATTGAGAAGGACGTTAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | TATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGTGCCTGAGAAGAAAGTaGAGGGCCACAGCCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YGSLCSLQKYIGPKLTMRCLRRK*RATAIF Trigger: AAAAATGGCTGTGGCCCTCCACTTTCTTCTCAGGCA...CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CAA 72 bp | CCACATACTCATTCTGTAAGTGAGACAGTGAGCAAGTaGAATAGACAACGTGACCTCCTGGTTTGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHTHSVSETVSK*NRQRDLLVWWQ Trigger: TTGCCACCAAACCAGGAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATGAGTATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | CCACATACTCATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACATTATAACCTCTGGGTaGCTGAGGTGGAGCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: PHTHSVSETVSKLNRQRDIITSG*LRWSYT Trigger: TGTGTAGCTCCACCTCAGTCACCCAGAGGTTATAAT...GTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATGAGTATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | GCACTATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGTTCATTATAACCTCTaGGTGACTGAGGTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALWQPMQFAEVHRSKIDHVHYNL*VTEVEL Trigger: TAGCTCCACCTCAGTCACCCAGAGGTTATAATGAAC...ATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CAA 72 bp | CATGAAAAGCTTTCGGAAGTGAGACAGGTCTTCCACTaGAACCTTGATGTTGTATTGATTGGCCAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HEKLSEVRQVFH*NLDVVLIGQKL Trigger: GAGCTTCTGGCCAATCAATACAACATCAAGGTTCAAGTGGAAGACCTGTCTCACTTCCGAAAGCTTTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | AATGCACCATACTTCTGCTCTGAGAGAAGACTAACACGGATTGATGGCCAAAGAGTCTCCAAGGTTATATaGGTAAGTTCAGGGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NAPYFCSERRLTRIDGQRVSKVI*VSSGEV Trigger: AACTTCCCCTGAACTTACTCATATAACCTTGGAGAC...TCTTTGGCCATCAATCCGTGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR GCA 90 bp | TATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGTTCTTAGGGGACTCTTaGTTTGATTATGAAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YGSLCSLQKYIGPKLTMRFLGDS*FDYEGS Trigger: GCTCCCTTCATAATCAAAGCAAGAGTCCCCTAAGAA...CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATTCTGAAGATGAGGAAATCCAACTATTTACCATGGTCCCAACCATCTATTGACCATGAGGTTTaGTATTACCAGCTCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAILKMRKSNYLPWSQPSIDHEV*YYQLPN Trigger: GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAAT...AGATGGTTGGGACCATGGTAAATAGTTGGATTTCCTCATCTTCAGAATGGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTGTAAGTGAGACAGTGAGCAAGTTGAATAGACAACGTGACCTCCTGGTTCTGATGAATGAGAGGTaGGGAAGTCACATAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSVSETVSKLNRQRDLLVLMNER*GSHITK Trigger: CTTTGTTATGTGACTTCCCCACCTCTCATTCATCAG...AACCAGGAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTCACTTACAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CAA 72 bp | CTCATTGTAACAACTGAGATACTACTGATGGCAGTCTaGTTAATGCACCTTCTACCCTCGTCTGGGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIVTTEILLMAV*LMHLLPSSGFL Trigger: CAAAAACCCAGACGAGGGTAGAAGGTGCATTAACAAGACTGCCATCAGTAGTATCTCAGTTGTTACAATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CAA 72 bp | AGCTTAGCACTCACACTATCCCAAGCAGCAAAATTATaGACCAATGCACCATACTTCTGCTCTGAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLALTLSQAAKL*TNAPYFCSERR Trigger: TCTTCTCTCAGAGCAGAAGTATGGTGCATTGGTCAATAATTTTGCTGCTTGGGATAGTGTGAGTGCTAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCACGCACACACACAGTTGACCATAAGCAATGTTTACTGTTTCCTGGCTCTAAGCAGCAAAATTATTaGCCAATGCACCATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KARTHTVDHKQCLLFPGSKQQNY*PMHHTS Trigger: AGAAGTATGGTGCATTGGTCAATAATTTTGCTGCTT...AGAGCCAGGAAACAGTAAACATTGCTTATGGTCAACTGTGTGTGTGCGTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | AGTTACTTATTCCTTAAATTAGACCATGTGCCATATGGAGACACTTGGGGAGGCAACAGAATGTGTCCATaGAAAGCTTTCGGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SYLFLKLDHVPYGDTWGGNRMCP*KAFGSE Trigger: CTCACTTCCGAAAGCTTTTCATGGACACATTCTGTT...GCCTCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAATAAGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR TCA 90 bp | CTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATACACCATGGGTAAGAAGAGGTaGAATGATGGAGTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFATIFRCNGWRQALGYTMGKKR*NDGVIS Trigger: GGAAATTACTCCATCATTTCACCTCTTCTTACCCAT...GGTGTATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTACATAGGTCCAAAATTGACCATGAGGTTTGGTATTACCAGCTCCCCAACTGGAGACTCTTGCTCTaGCTTTCAATTTTACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSKIDHEVWYYQLPNWRLLL*LSILPS Trigger: AGATGGTAAAATTGAAAGCCAGAGCAAGAGTCTCCA...GTTGGGGAGCTGGTAATACCAAACCTCATGGTCAATTTTGGACCTATGTACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| 3UTR CAA 72 bp | ATATTCCAGTTATTGACAAGGCACGCACACACACAGTaGACCATAAGCAATGTTTACTGTTTCCTGGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IFQLLTRHAHTQ*TISNVYCFLAL Trigger: TAGAGCCAGGAAACAGTAAACATTGCTTATGGTCAACTGTGTGTGTGCGTGCCTTGTCAATAACTGGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | CTAACGTCCTTCTCAATGGATACTTTTAATACTCAAATAGGATTAGCAGGGAAGAGCTCAATGGCACCTTaGACCACATACTCATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSFSMDTFNTQIGLAGKSSMAP*TTYSFC Trigger: ACAGAATGAGTATGTGGTGCAAGGTGCCATTGAGCT...CTTCCCTGCTAATCCTATTTGAGTATTAAAAGTATCCATTGAGAAGGACGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTACTTATTCCTTAAATTAGACCATGTGCCATATGGAGACACTTGGGGAAATGCACCATACTTCTaGTCTGAGAGAAGACTAACA | + |
|
Preference number: 4 (lower is better) Translates to: FSYLFLKLDHVPYGDTWGNAPYF*SERRLT Trigger: TGTTAGTCTTCTCTCAGAGCAGAAGTATGGTGCATT...TCCCCAAGTGTCTCCATATGGCACATGGTCTAATTTAAGGAATAAGTAACTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS TCA 90 bp | CCAGGCTCCCACAGAAAGGACCCTACACAGGGCTTCTGGAGAGCCTaGGGCAGGGATGAGCTAGGAGAACCAGCACTCTCAGGTGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSHRKDPTQGFWRA*GRDELGEPALSGGR Trigger: CCTACCACCTGAGAGTGCTGGTTCTCCTAGCTCATCCCTGCCTCAGGCTCTCCAGAAGCCCTGTGTAGGGTCCTTTCTGTGGGAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGAAGCTGCACCTGCAGCATAGGCAACATCTGTCGCTCCTTCTTCCTTGACGGAGGCGCCACAGACTaGATATGGGATGGCGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSCTCSIGNICRSFFLDGGATD*IWDGGP Trigger: GGGTCCGCCATCCCATATCAAGTCTGTGGCGCCTCC...GTCAAGGAAGAAGGAGCGACAGATGTTGCCTATGCTGCAGGTGCAGCTTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | GATGTAATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCAGTCCAGGGATGGAGTaGGAGAGAGGCCACTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DVMDGDRPWDTPATSLSFSPGME*ERGHSQ Trigger: CTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGACT...GAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR CAA 90 bp | ATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCAATGGAAGTCCAGGGATGGAGTaGGAGAGAGGCCACTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MDGDRPWDTPATSLSFNGSPGME*ERGHSQ Trigger: CTGAGAGTGGCCTCTCTCCAACTCCATCCCTGGACT...TCCATTGAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030474.12 ENSMUST00000030475.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTAGATTACGGCAACAACCCGTCTGAAGTAATGCCAGCGTTTTGCCCCCAGAACAAAGACGCGGACTaGGAGGGCATGAACGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLDYGNNPSEVMPAFCPQNKDAD*EGMNAE Trigger: CTCAGCGTTCATGCCCTCCAAGTCCGCGTCTTTGTT...CTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTTGTTGCCGTAATCTAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | GATGTAATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCCAAGGGGAGGTGAAATaGCAAGGCCAGGTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DVMDGDRPWDTPATSLSFQGEVK*QGQVSG Trigger: CCCTGAGACCTGGCCTTGCAATTTCACCTCCCCTTG...GAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCATTACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS GCA 90 bp | CCTGAGTACTGCTTTGGAGAGGACTACTGCTCCGGCTCCGACTTCTaGTCTGAAAGGCACCCCTTCTTAGGGGACTCTTGCTTTGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: PEYCFGEDYCSGSDF*SERHPFLGDSCFDY Trigger: ATAATCAAAGCAAGAGTCCCCTAAGAAGGGGTGCCTTTCAGAGCAGAAGTCGGAGCCGGAGCAGTAGTCCTCTCCAAAGCAGTACTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAGTCCCTACTGCCTGCTGTTTGCAACTATCTTTAGATGTAATGGATGGTCACTGACGAAGTCCTaGGCACTCAGCTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPYCLLFATIFRCNGWSLTKS*ALSCSS Trigger: GCTGGAGCAGCTGAGTGCCAAGGACTTCGTCAGTGA...CCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CAA 90 bp | TTCACTGACGAAGTCCTTGGCACTCAGCTGCTCCAGCTTAGCACTCACACTATCCAGGTAGAGGAGGTCTaGGATGGAGGCAAAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: FTDEVLGTQLLQLSTHTIQVEEV*DGGKEQ Trigger: CTGTTCTTTGCCTCCATCCAAGACCTCCTCTACCTG...GATAGTGTGAGTGCTAAGCTGGAGCAGCTGAGTGCCAAGGACTTCGTCAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS TCA 90 bp | CTCTTATGGTGTTTGACACCCATGTTGGTACTCTCATTACGGTCCTaGGTACTGCTTTGGAGAGGACTACTGCTCCGGCTCCGACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLWCLTPMLVLSLRS*VLLWRGLLLRLRLL Trigger: CAGAAGTCGGAGCCGGAGCAGTAGTCCTCTCCAAAGCAGTACTCAGGACCGTAATGAGAGTACCAACATGGGTGTCAAACACCATAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 90 bp | TTTCCCAAGAGGTACATCAAGCTGTGGTTTAGGTTCACAAGAGTTTaGAGGCATAGGGTTGTCGTGGTAAGGGTTGCCAGAGGGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPKRYIKLWFRFTRV*RHRVVVVRVARGWG Trigger: TCCCCACCCTCTGGCAACCCTTACCACGACAACCCTATGCCTCCAAACTCTTGTGAACCTAAACCACAGCTTGATGTACCTCTTGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | AACCCGTCTGAAGTAATGCCAGCGTTTTGCCCCCAGGAGCAGCACACAGATCAACTCTCAGGTGGTAGGTaGATAACACAGAAAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NPSEVMPAFCPQEQHTDQLSGGR*ITQKGL Trigger: GAGTCCTTTCTGTGTTATCAACCTACCACCTGAGAG...TTGATCTGTGTGCTGCTCCTGGGGGCAAAACGCTGGCATTACTTCAGACGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 90 bp | GGTGGGAGGAACCACAGAATACATATGAGTATTGCAGGGGGAAACTaGAGGTGGTACGTGGGGACTACTCTTAGGATATCTACTGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGRNHRIHMSIAGGN*RWYVGTTLRISTGQ Trigger: TTGCCCAGTAGATATCCTAAGAGTAGTCCCCACGTACCACCTCCAGTTTCCCCCTGCAATACTCATATGTATTCTGTGGTTCCTCCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | ATGGATGGAGACAGGCCTTGGGATACACCTGCCACTAGCCTCAGTTTCAATGGAATCTGTTGCCTGCATTaGGAGAAAGGCCAGCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: MDGDRPWDTPATSLSFNGICCLH*EKGQHY Trigger: GTAATGCTGGCCTTTCTCCAAATGCAGGCAACAGAT...TCCATTGAAACTGAGGCTAGTGGCAGGTGTATCCCAAGGCCTGTCTCCATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 90 bp | AAGTGGAGGGCCACAGCCATTTTTCCCAAGAGGTACATCAAGCTGTaGTTTAGGTTCACAAGAGTTTGGAGGCATAGGGTTGTCGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KWRATAIFPKRYIKL*FRFTRVWRHRVVVV Trigger: TACCACGACAACCCTATGCCTCCAAACTCTTGTGAACCTAAACCACAGCTTGATGTACCTCTTGGGAAAAATGGCTGTGGCCCTCCACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 90 bp | AGGAACCACAGAATACATATGAGTATTGCAGGGGGAAACTGGAGGTaGTACGTGGGGACTACTCTTAGGATATCTACTGGGCAAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNHRIHMSIAGGNWR*YVGTTLRISTGQSR Trigger: CCTGCTTTGCCCAGTAGATATCCTAAGAGTAGTCCCCACGTACCACCTCCAGTTTCCCCCTGCAATACTCATATGTATTCTGTGGTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACAGGCCTTGGGATGGAGCTACACACTGGTaGTTCAGGGGAGATGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ACCLQLSLDVMDGDRPWDGATHW*FRGDGK Trigger: TTTCCCATCTCCCCTGAACAACCAGTGTGTAGCTCC...ATCCCAAGGCCTGTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS TCA 90 bp | CATCTGCAGGACTCTGGCTTTGCTTCCGACTTCTCTTATGGTGTTTaGCACCCATGTTGGTACTCTCATTACGGTCCTGAGTACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HLQDSGFASDFSYGV*HPCWYSHYGPEYCF Trigger: AAAGCAGTACTCAGGACCGTAATGAGAGTACCAACATGGGTGTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | TCACCCCAAAACACCGCGTGTGAGGAAAGCCTGCTATGTGGAAGAACTCAGAACAGACAGGTCTTCCACTaGAACCTTGATGTTGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: SPQNTACEESLLCGRTQNRQVFH*NLDVVL Trigger: CAATACAACATCAAGGTTCAAGTGGAAGACCTGTCT...GTTCTGAGTTCTTCCACATAGCAGGCTTTCCTCACACGCGGTGTTTTGGGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS GCA 90 bp | CTCTTGCTCTGGCTTTCAATTTTACCATCTGCAGGACTCTGGCTTTaGTTCCGACTTCTCTTATGGTGTTTGACACCCATGTTGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLWLSILPSAGLWL*FRLLLWCLTPMLVL Trigger: GAGTACCAACATGGGTGTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGATGGTAAAATTGAAAGCCAGAGCAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATTCTGTCTTAATCCCTAATGGAGCAAGGGCCTTAGTAGAGGCTAAGAGAGTCGCTCCTTCTTCCTaGACCGCTGAAAGATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TDSVLIPNGARALVEAKRVAPSS*TAERCC Trigger: ACAACATCTTTCAGCGGTCAAGGAAGAAGGAGCGAC...TCTCTTAGCCTCTACTAAGGCCCTTGCTCCATTAGGGATTAAGACAGAATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS GCA 90 bp | TTTCCTATGCTGGAGACTCTTGCTCTGGCTTTCAATTTTACCATCTaGAGGACTCTGGCTTTGCTTCCGACTTCTCTTATGGTGTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FPMLETLALAFNFTI*RTLALLPTSLMVFD Trigger: GTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGATGGTAAAATTGAAAGCCAGAGCAAGAGTCTCCAGCATAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTCCCTACTGCCTGCTGTTTGCAACTATCTTTAGATGTAATGGATGGAGACCCCTTCCCTAATATCTaGAGGCACATAACTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVPTACCLQLSLDVMDGDPFPNI*RHITVK Trigger: CTTCACAGTTATGTGCCTCAAGATATTAGGGAAGGG...GTCTCCATCCATTACATCTAAAGATAGTTGCAAACAGCAGGCAGTAGGGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CAA 90 bp | AATAAAATGTCAGGAAACTCCGAGGTACTTGGAGAGCGAAAAGAAGTAGGTTGCGAGACAGTGAGCAAGTaGAATAGACAACGTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: NKMSGNSEVLGERKEVGCETVSK*NRQRDL Trigger: GAGGTCACGTTGTCTATTCAACTTGCTCACTGTCTC...GCAACCTACTTCTTTTCGCTCTCCAAGTACCTCGGAGTTTCCTGACATTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGCCTGCTATGTGGAAGAACTCAGAACTCTAGAGGATGTGCAGATGAGCAACCTTGATGTTGTATaGATTGGCCAGAAGCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RKACYVEELRTLEDVQMSNLDVV*IGQKLN Trigger: ATTGAGCTTCTGGCCAATCAATACAACATCAAGGTT...GCTCATCTGCACATCCTCTAGAGTTCTGAGTTCTTCCACATAGCAGGCTTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
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| CDS-3UTR CAA 90 bp | TATGGCAGCCTATGCAGTTTGCAGAAGTACATAGGTCCAAAATTGACCATGAGGGCTCTGACTTTTGTTTaGGTGGTTAATCTGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YGSLCSLQKYIGPKLTMRALTFV*VVNLAV Trigger: GACAGCCAGATTAACCACCAAAACAAAAGTCAGAGC...CCTCATGGTCAATTTTGGACCTATGTACTTCTGCAAACTGCATAGGCTGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS-3UTR CAA 90 bp | ACGTCCTTCTCAATGGATACTTTTAATACTCAAATAGGATTAGCAGGGAAGGCAGGCAGCCTATGCAGTTaGCAGAAGTACATAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSFSMDTFNTQIGLAGKAGSLCS*QKYIGP Trigger: TGGACCTATGTACTTCTGCAAACTGCATAGGCTGCC...TGCCTTCCCTGCTAATCCTATTTGAGTATTAAAAGTATCCATTGAGAAGGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CAA 90 bp | AATAAAATGTCAGGAAACTCCGAGGTACTTGGAGAGCGAAAAGAAGTAGGTTGCCAAGCAGCAAAATTATaGACCAATGCACCATACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKMSGNSEVLGERKEVGCQAAKL*TNAPYF Trigger: GAAGTATGGTGCATTGGTCAATAATTTTGCTGCTTG...GCAACCTACTTCTTTTCGCTCTCCAAGTACCTCGGAGTTTCCTGACATTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS-3UTR CAA 90 bp | TTGCTAACGTCCTTCTCAATGGATACTTTTAATACTCAAATAGGATTAGCAGGGAAGCTCAATGGCACCTaGCACCACATACTCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLTSFSMDTFNTQIGLAGKLNGT*HHILIL Trigger: CAGAATGAGTATGTGGTGCAAGGTGCCATTGAGCTT...CCCTGCTAATCCTATTTGAGTATTAAAAGTATCCATTGAGAAGGACGTTAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS CCA 72 bp | GGTGGAACAAGGAGGCGCCACAGACTTGATATGGGATaGCGGACCCCTGGGAGCAGAATAAGTGCCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGTRRRHRLDMG*RTPGSRISATR Trigger: CCTTGTGGCACTTATTCTGCTCCCAGGGGTCCGCCATCCCATATCAAGTCTGTGGCGCCTCCTTGTTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS TCA 72 bp | TTGGAGAAAGGCCAGCATTACAGGAAAGGTGGTCGTTaGAGTCTTTCCCGGGCGCCACAGGCACCTCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LEKGQHYRKGGR*SLSRAPQAPRE Trigger: CTCTCGAGGTGCCTGTGGCGCCCGGGAAAGACTTCAACGACCACCTTTCCTGTAATGCTGGCCTTTCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS TCA 72 bp | CACAGAAAGGACCCTACACAGGGCTTCTGGAGAGCCTaGGGCAGGGATGAGCTAGGAGAACCAGCACTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HRKDPTQGFWRA*GRDELGEPALS Trigger: TGAGAGTGCTGGTTCTCCTAGCTCATCCCTGCCTCAGGCTCTCCAGAAGCCCTGTGTAGGGTCCTTTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS GCA 72 bp | CATTACGGTCCTGAGTACTGCTTTGGAGAGGACTACTaGTCCGGCTCCGACTTCTGCTCTGAAAGGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: HYGPEYCFGEDY*SGSDFCSERHP Trigger: GGGGTGCCTTTCAGAGCAGAAGTCGGAGCCGGAGCAGTAGTCCTCTCCAAAGCAGTACTCAGGACCGTAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS TCA 72 bp | AGGGGAGATGGGAAATACGGGGAAGGATTAGGACACTaGGGAAGAGGTGGTCCTGTGGTGCAGGAAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RGDGKYGEGLGH*GRGGPVVQEGP Trigger: TGGTCCTTCCTGCACCACAGGACCACCTCTTCCTCAGTGTCCTAATCCTTCCCCGTATTTCCCATCTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CCA 72 bp | TACTGGGCTGGCTCTAGGGGCCTGATGAATGAGAGGTaGGGAAGTCACATAACAAAGACGCGGACTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YWAGSRGLMNER*GSHITKTRTWR Trigger: CCTCCAAGTCCGCGTCTTTGTTATGTGACTTCCCCACCTCTCATTCATCAGGCCCCTAGAGCCAGCCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 90 bp | TTGCCTGCATTTGGAGAAAGGCCAGCATTACAGGAAAGGTGGTCGTaGAAGTCTTTCCCGGGCGCCACAGGCACCTCGAGAGTGAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: LPAFGERPALQERWS*KSFPGATGTSRVRT Trigger: TGTTCTCACTCTCGAGGTGCCTGTGGCGCCCGGGAAAGACTTCAACGACCACCTTTCCTGTAATGCTGGCCTTTCTCCAAATGCAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS TCA 72 bp | GATGCAGGGGTTAGAGGTCTAGTTTCCACAGATCGGTaGGCAAGGGGAGGTGAAATTGCAAGGCCAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DAGVRGLVSTDR*ARGGEIARPGL Trigger: GAGACCTGGCCTTGCAATTTCACCTCCCCTTGCTCACCGATCTGTGGAAACTAGACCTCTAACCCCTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS TCA 72 bp | AATAGATGTGGGTGGAACAAGGAGGCGCCACAGACTTaGTATGGGATGGCGGACCCCTGGGAGCAGAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: NRCGWNKEAPQT*YGMADPWEQNK Trigger: CTTATTCTGCTCCCAGGGGTCCGCCATCCCATATCAAGTCTGTGGCGCCTCCTTGTTCCACCCACATCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS GCA 72 bp | GGGAGGTGGGAGGAACCACAGAATACATATGAGTATTaGAGGGGGAAACTGGAGGTGGTACGTGGGGACTAC | + |
|
Preference number: 6 (lower is better) Translates to: GRWEEPQNTYEY*RGKLEVVRGDY Trigger: GTAGTCCCCACGTACCACCTCCAGTTTCCCCCTGCAATACTCATATGTATTCTGTGGTTCCTCCCACCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CCA 72 bp | GCTGTAGGGGATCTGGGAGGGATTGTTCAGTGGGACTaGAGAAGTCACAGCATAGGTATGAATGCCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVGDLGGIVQWD*RSHSIGMNATG Trigger: CCCTGTGGCATTCATACCTATGCTGTGACTTCTCCAGTCCCACTGAACAATCCCTCCCAGATCCCCTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CCA 72 bp | ACTGACAGAAGTGCTACAGGTAGAGGAGGTCTTGGATaGAGGCAAAGAACAGCTGTAGGGGATCTGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TDRSATGRGGLG*RQRTAVGDLGG Trigger: CCCTCCCAGATCCCCTACAGCTGTTCTTTGCCTCCATCCAAGACCTCCTCTACCTGTAGCACTTCTGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CCA 72 bp | CTGAGGTGGAGCTACACACTGGTTGTTCAGGGGAGATaGGAAATACGGGGAAGGATTAGGACACTGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRWSYTLVVQGR*EIRGRIRTLRK Trigger: CTTCCTCAGTGTCCTAATCCTTCCCCGTATTTCCCATCTCCCCTGAACAACCAGTGTGTAGCTCCACCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 72 bp | CATGTTGGTACTCTCATTACGGTCCTGAGTACTGCTTaGGAGAGGACTACTGCTCCGGCTCCGACTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HVGTLITVLSTA*ERTTAPAPTSA Trigger: AGCAGAAGTCGGAGCCGGAGCAGTAGTCCTCTCCAAAGCAGTACTCAGGACCGTAATGAGAGTACCAACATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 90 bp | TTTGACACCCATGTTGGTACTCTCATTACGGTCCTGAGTACTGCTTaGGAGAGGACTACTGCTCCGGCTCCGACTTCTGCTCTGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FDTHVGTLITVLSTA*ERTTAPAPTSALKG Trigger: GCCTTTCAGAGCAGAAGTCGGAGCCGGAGCAGTAGTCCTCTCCAAAGCAGTACTCAGGACCGTAATGAGAGTACCAACATGGGTGTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS TCA 72 bp | ATTTCTTCTTATATCGATATCTCCGCGGGACCGGCGTaGAGTCCACGAGCTTCAGCAGCTTCCGAACACATC | + |
|
Preference number: 6 (lower is better) Translates to: ISSYIDISAGPA*SPRASAASEHI Trigger: GATGTGTTCGGAAGCTGCTGAAGCTCGTGGACTTCACGCCGGTCCCGCGGAGATATCGATATAAGAAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
||
| CDS TCA 72 bp | GGAGTCGAAATCACCGGGCCTGTCTCCAAGGTTATATaGGTAAGTTCAGGGGAAGTTACTGGGCTGGCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GVEITGPVSKVI*VSSGEVTGLAL Trigger: TAGAGCCAGCCCAGTAACTTCCCCTGAACTTACTCATATAACCTTGGAGACAGGCCCGGTGATTTCGACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS TCA 72 bp | CATGGACTAAAGAGGCCAAAGGACTGGGAGGGAGGCTaGGGACAGGTGTTGGTCTTATGGGATTTAGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: HGLKRPKDWEGG*GQVLVLWDLEW Trigger: CCATTCTAAATCCCATAAGACCAACACCTGTCCTCAGCCTCCCTCCCAGTCCTTTGGCCTCTTTAGTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CCA 72 bp | CTCCAAGGTTATATGAGTAAGTTCAGGGGAAGTTACTaGGCTGGCTCTAGGGGCCTGATGAATGAGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQGYMSKFRGSY*AGSRGLMNERW Trigger: CCACCTCTCATTCATCAGGCCCCTAGAGCCAGCCCAGTAACTTCCCCTGAACTTACTCATATAACCTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS TCA 72 bp | GATAAATGGGAGGTGGGAGGAACCACAGAATACATATaGGTATTGCAGGGGGAAACTGGAGGTGGTACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DKWEVGGTTEYI*VLQGETGGGTW Trigger: CCACGTACCACCTCCAGTTTCCCCCTGCAATACTCATATGTATTCTGTGGTTCCTCCCACCTCCCATTTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 72 bp | GATGAGCTAGGAGAACCAGCACTCTCAGGTGGTAGGTaGATAACACAGAAAGGACTCCTAGGGGCAGATATC | + |
|
Preference number: 6 (lower is better) Translates to: DELGEPALSGGR*ITQKGLLGADI Trigger: GATATCTGCCCCTAGGAGTCCTTTCTGTGTTATCAACCTACCACCTGAGAGTGCTGGTTCTCCTAGCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS TCA 72 bp | GACTCTGGCTTTGCTTCCGACTTCTCTTATGGTGTTTaGCACCCATGTTGGTACTCTCATTACGGTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: DSGFASDFSYGV*HPCWYSHYGPE Trigger: CTCAGGACCGTAATGAGAGTACCAACATGGGTGTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 72 bp | AGGTACATCAAGCTGTGGTTTAGGTTCACAAGAGTTTaGAGGCATAGGGTTGTCGTGGTAAGGGTTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RYIKLWFRFTRV*RHRVVVVRVAR Trigger: TCTGGCAACCCTTACCACGACAACCCTATGCCTCCAAACTCTTGTGAACCTAAACCACAGCTTGATGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 72 bp | GAAATACGGGGAAGGATTAGGACACTGAGGAAGAGGTaGTCCTGTGGTGCAGGAAGGACCAGAAATTATAGT | + |
|
Preference number: 6 (lower is better) Translates to: EIRGRIRTLRKR*SCGAGRTRNYS Trigger: ACTATAATTTCTGGTCCTTCCTGCACCACAGGACCACCTCTTCCTCAGTGTCCTAATCCTTCCCCGTATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 72 bp | TCTGCAGGACTCTGGCTTTGCTTCCGACTTCTCTTATaGTGTTTGACACCCATGTTGGTACTCTCATTACGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGLWLCFRLLL*CLTPMLVLSLR Trigger: CCGTAATGAGAGTACCAACATGGGTGTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 72 bp | GCCACAGCCATTTTTCCCAAGAGGTACATCAAGCTGTaGTTTAGGTTCACAAGAGTTTGGAGGCATAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ATAIFPKRYIKL*FRFTRVWRHRV Trigger: AACCCTATGCCTCCAAACTCTTGTGAACCTAAACCACAGCTTGATGTACCTCTTGGGAAAAATGGCTGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 72 bp | AGAATACATATGAGTATTGCAGGGGGAAACTGGAGGTaGTACGTGGGGACTACTCTTAGGATATCTACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RIHMSIAGGNWR*YVGTTLRISTG Trigger: CCCAGTAGATATCCTAAGAGTAGTCCCCACGTACCACCTCCAGTTTCCCCCTGCAATACTCATATGTATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
||
| CDS CCA 72 bp | TGTCCCACACTTTTCCTATGCTGGAGACTCTTGCTCTaGCTTTCAATTTTACCATCTGCAGGACTCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CPTLFLCWRLLL*LSILPSAGLWL Trigger: AAGCCAGAGTCCTGCAGATGGTAAAATTGAAAGCCAGAGCAAGAGTCTCCAGCATAGGAAAAGTGTGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 90 bp | ACTCTTGCTCTGGCTTTCAATTTTACCATCTGCAGGACTCTGGCTTaGCTTCCGACTTCTCTTATGGTGTTTGACACCCATGTTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: TLALAFNFTICRTLA*LPTSLMVFDTHVGT Trigger: AGTACCAACATGGGTGTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGATGGTAAAATTGAAAGCCAGAGCAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS GCA 72 bp | TGGCTTTCAATTTTACCATCTGCAGGACTCTGGCTTTaGTTCCGACTTCTCTTATGGTGTTTGACACCCATG | + |
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Preference number: 6 (lower is better) Translates to: WLSILPSAGLWL*FRLLLWCLTPM Trigger: CATGGGTGTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGATGGTAAAATTGAAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CCA 72 bp | AACCACAGAATACATATGAGTATTGCAGGGGGAAACTaGAGGTGGTACGTGGGGACTACTCTTAGGATATCT | + |
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Preference number: 6 (lower is better) Translates to: NHRIHMSIAGGN*RWYVGTTLRIS Trigger: AGATATCCTAAGAGTAGTCCCCACGTACCACCTCCAGTTTCCCCCTGCAATACTCATATGTATTCTGTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CCA 72 bp | AAAATTCTGCAGAGCAAGCCGACTGGCCGTGAATTGTaGTTCTGTGGTAGCCCATTTCTTCTTATATCGATA | + |
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Preference number: 6 (lower is better) Translates to: KILQSKPTGREL*FCGSPFLLISI Trigger: TATCGATATAAGAAGAAATGGGCTACCACAGAACCACAATTCACGGCCAGTCGGCTTGCTCTGCAGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030475.3 |
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| CDS CCA 72 bp | TTGCTCTGGCTTTCAATTTTACCATCTGCAGGACTCTaGCTTTGCTTCCGACTTCTCTTATGGTGTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: LLWLSILPSAGL*LCFRLLLWCLT Trigger: TGTCAAACACCATAAGAGAAGTCGGAAGCAAAGCCAGAGTCCTGCAGATGGTAAAATTGAAAGCCAGAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 72 bp | TTAATCTGTCCCACACTTTTCCTATGCTGGAGACTCTaGCTCTGGCTTTCAATTTTACCATCTGCAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: LICPTLFLCWRL*LWLSILPSAGL Trigger: GAGTCCTGCAGATGGTAAAATTGAAAGCCAGAGCAAGAGTCTCCAGCATAGGAAAAGTGTGGGACAGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 72 bp | AAGGGAGCTGTTCTTGTTTGGGCTCTGACTTTTGTTTaGGTGGTTAATCTGGCTGTCACTACTTTGATAGTC | + |
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Preference number: 6 (lower is better) Translates to: KGAVLVWALTFV*VVNLAVTTLIV Trigger: GACTATCAAAGTAGTGACAGCCAGATTAACCACCAAAACAAAAGTCAGAGCCCAAACAAGAACAGCTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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| CDS CAA 90 bp | TTGATTATGAAGGGAGCTGTTCTTGTTTGGGCTCTGACTTTTGTTTaGGTGGTTAATCTGGCTGTCACTACTTTGATAGTCACTACAAAC | + |
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Preference number: 6 (lower is better) Translates to: LIMKGAVLVWALTFV*VVNLAVTTLIVTTN Trigger: GTTTGTAGTGACTATCAAAGTAGTGACAGCCAGATTAACCACCAAAACAAAAGTCAGAGCCCAAACAAGAACAGCTCCCTTCATAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165493.8 |
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