Pregenerated sensors for NSUN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050312Ensembl transcript IDs: ENSMUST00000063089.12, ENSMUST00000143314.8, ENSMUST00000152553.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCGCGCGCGCTCGACTTTTATCCGTGGATTCAAGGGAAGGTGGGTaGGAGCTGGTAGCTCAGTCCATTCCTGGAACTAAGGCAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: RARARLLSVDSREGG*ELVAQSIPGTKAEK Trigger: CTTCTCTGCCTTAGTTCCAGGAATGGACTGAGCTACCAGCTCCCACCCACCTTCCCTTGAATCCACGGATAAAAGTCGAGCGCGCGCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR TCA 90 bp | CTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGCTaGCTTGAATTTATAATTCTTCCACCTCAGCCCCCAAAATGCTGT | + |
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Preference number: 1 (lower is better) Translates to: LPTSSLRRVLLGSQG*LEFIILPPQPPKCC Trigger: ACAGCATTTTGGGGGCTGAGGTGGAAGAATTATAAATTCAAGTCAGCCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR TCA 90 bp | GGTACGATGTTACTGTCGGAAGTTAAGACCTCGCTGATCACATCTTaGTTTTCAGCCTTGGAAAGCGTGCATGTAGAGTACACGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: GTMLLSEVKTSLITS*FSALESVHVEYTRS Trigger: GCTCCTCGTGTACTCTACATGCACGCTTTCCAAGGCTGAAAATCAAGATGTGATCAGCGAGGTCTTAACTTCCGACAGTAACATCGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR CCA 90 bp | ACCAAAAGGCTGCATTTCTGGTCAGTAGGGGCAAATGTGAAGTCTTaGGAGAAAGTCCTTGCTATCCCACTAATATCCACAGGTACGATG | + |
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Preference number: 1 (lower is better) Translates to: TKRLHFWSVGANVKS*EKVLAIPLISTGTM Trigger: CATCGTACCTGTGGATATTAGTGGGATAGCAAGGACTTTCTCCCAAGACTTCACATTTGCCCCTACTGACCAGAAATGCAGCCTTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR TCA 90 bp | AAACCATCTATATATCTCAGTTCTGGAGGACCTGATGTCCAGTTCTaGCTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACA | + |
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Preference number: 1 (lower is better) Translates to: KPSIYLSSGGPDVQF*LPHATGMHMVRRHT Trigger: TGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTCAGAACTGGACATCAGGTCCTCCAGAACTGAGATATATAGATGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR GCA 90 bp | CAAATGGGGAGAAATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTaGAGTAAACAGAAGACAGTCCTTAACTTAACACAGAACAACTCC | + |
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Preference number: 1 (lower is better) Translates to: QMGRNQAGVNRVTAL*SKQKTVLNLTQNNS Trigger: GGAGTTGTTCTGTGTTAAGTTAAGGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGATTTCTCCCCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR CCA 90 bp | TTTGAACATGGAGCGTCAACTAACACCTTGTCAAATGTTGCAGGCTaGGCATCTCCCATTTCTCTGCCATCCAATTCAGACACTTTAATT | + |
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Preference number: 1 (lower is better) Translates to: FEHGASTNTLSNVAG*ASPISLPSNSDTLI Trigger: AATTAAAGTGTCTGAATTGGATGGCAGAGAAATGGGAGATGCCCAGCCTGCAACATTTGACAAGGTGTTAGTTGACGCTCCATGTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR CCA 90 bp | GAACATAATTTACCCTTTCAGTTTGTATTTGTGAATAAATGCAAATaGGGAGAAATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: EHNLPFQFVFVNKCK*GEIKLVSTESLPSA Trigger: TGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGATTTCTCCCCATTTGCATTTATTCACAAATACAAACTGAAAGGGTAAATTATGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCTCTCCTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGGCCCCCAAAATGCTGTaGCTACAGGTGTGCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLSPPYIILEEGLARQPRAPKML*LQVCSA Trigger: GGCACTGCACACCTGTAGTCACAGCATTTTGGGGGC...CCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAGGAGAGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTCTCCTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGTCAAGGGAAGGTGGGTaGGAGCTGGTAGCTCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SLSPPYIILEEGLARQPRSREGG*ELVAQS Trigger: GGACTGAGCTACCAGCTCCCACCCACCTTCCCTTGA...CCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAGGAGAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGGCCACACAGGCTGCTCTTATAGACCGGTGGTCAGGGGAGTTTAGCAGCCACCTTGTCAAATGTTaGAGGCTGGGCATCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: GVATQAALIDRWSGEFSSHLVKC*RLGISH Trigger: ATGGGAGATGCCCAGCCTGCAACATTTGACAAGGTG...GCTGCTAAACTCCCCTGACCACCGGTCTATAAGAGCAGCCTGTGTGGCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGGCCACACAGGCTGCTCTTATAGACCGGTGGTCAGGGGAGTTTAGCAGCAGAGACAGAGTTTGCTaGTCTTCTGATGGAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GVATQAALIDRWSGEFSSRDRVC*SSDGEK Trigger: CTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCT...GCTGCTAAACTCCCCTGACCACCGGTCTATAAGAGCAGCCTGTGTGGCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGTGGCCACACAGGCTGCTCTTATAGACCGGTGGTCAGGGGAGTTTAGCAGCACAACTAACACGTGGTaGGCTCAGAAAATATGCATT | + |
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Preference number: 2 (lower is better) Translates to: GVATQAALIDRWSGEFSSTTNTW*AQKICI Trigger: AATGCATATTTTCTGAGCTCACCACGTGTTAGTTGT...GCTGCTAAACTCCCCTGACCACCGGTCTATAAGAGCAGCCTGTGTGGCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCTCTCCTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGCAGAAGACGAGCTTTTaGTTCCAAGCACCTATATGG | + |
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Preference number: 2 (lower is better) Translates to: SLSPPYIILEEGLARQPRQKTSF*FQAPIW Trigger: CCATATAGGTGCTTGGAATCAAAAGCTCGTCTTCTG...CCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAGGAGAGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCTCTCCTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGTCCTCAATTGGTTCTTaGTCTGTCAGTAAAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SLSPPYIILEEGLARQPRSSIGS*SVSKEA Trigger: GGCTTCTTTACTGACAGATCAAGAACCAATTGAGGA...CCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAGGAGAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACACAAGGAAGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGTCAAGGGAAGGTGGGTaGGAGCTGGTAGCTCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: QTQGRRDRVCWSSDGEKLSREGG*ELVAQS Trigger: GGACTGAGCTACCAGCTCCCACCCACCTTCCCTTGA...CAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCTTCCTTGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCAGTTGTCCAGCCATGTaGGATCTCAAAATGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: IKLVSTESLPSAVNRRQSSCPAM*DLKMGW Trigger: CCACCCCATTTTGAGATCTCACATGGCTGGACAACT...GGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | CTGACTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACATGTTGCCAAGTTGTCCAGCCATGTaGGATCTCAAAATGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LTSPCNRYAHGTQTYMLPSCPAM*DLKMGW Trigger: CCACCCCATTTTGAGATCTCACATGGCTGGACAACT...TGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCTCTCCTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGTGGTTTTGTTTCAAGTaGTTGCTTTATAGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SLSPPYIILEEGLARQPRWFCFK*LLYSLL Trigger: CAGCAGGCTATAAAGCAAGCACTTGAAACAAAACCA...CCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAGGAGAGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTCTCCTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGGTGAATAAATGCAAATaGGGAGAAATCAAGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SLSPPYIILEEGLARQPRVNKCK*GEIKLV Trigger: CACCAGCTTGATTTCTCCCCATTTGCATTTATTCAC...CCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAGGAGAGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR CAA 90 bp | AGGCAGCTTTCTGAGAGTCCGACGAGAACAGCCAGCTTCGATCATTaGAACATGGAGCGTCAACTAACACCTTGTCAAATGTTGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RQLSESPTRTASFDH*NMERQLTPCQMLQA Trigger: AGCCTGCAACATTTGACAAGGTGTTAGTTGACGCTCCATGTTCAAATGATCGAAGCTGGCTGTTCTCGTCGGACTCTCAGAAAGCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR CAA 90 bp | CAGGCGGGAGATAACAGCATGCAGCAATTGTGCCAAGAAGGTAAGTaGAAAAGGAATAGCCGTGTGATGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QAGDNSMQQLCQEGK*KRNSRVMCVCVCVC Trigger: ACACACACACACACACACACACATCACACGGCTATTCCTTTTCAACTTACCTTCTTGGCACAATTGCTGCATGCTGTTATCTCCCGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR CAA 90 bp | CACCAAAAGGCTGCATTTCTGGTCAGTAGGGGCAAATGTGAAGTCTaGGGAGAAAGTCCTTGCTATCCCACTAATATCCACAGGTACGAT | + |
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Preference number: 2 (lower is better) Translates to: HQKAAFLVSRGKCEV*GESPCYPTNIHRYD Trigger: ATCGTACCTGTGGATATTAGTGGGATAGCAAGGACTTTCTCCCAAGACTTCACATTTGCCCCTACTGACCAGAAATGCAGCCTTTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCTTAACTAGTTTGCTGGTCTTCTaGTGGAGAAAAGTTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LVSTESLPSAVNRRQSLTSLLVF*WRKVVQ Trigger: CTGGACAACTTTTCTCCATCAGAAGACCAGCAAACT...AGTTAAGGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCATGTCGAAAGTCAAATaGGTGCGTGTGAATCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: IKLVSTESLPSAVNRRQSMSKVK*VRVNLL Trigger: CAACAGATTCACACGCACGCATTTGACTTTCGACAT...GGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACATGTTGCCAAGAGAGACCACTCTGAATaGTTTGGGGTCTTGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: DFPMQQVCTWYADIHVAKRDHSE*FGVLVI Trigger: TATTACCAAGACCCCAAACCATTCAGAGTGGTCTCT...CTTGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACACAAGGAAGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGTCAAATGTTGCAGGCTaGGCATCTCCCATTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QTQGRRDRVCWSSDGEKLSNVAG*ASPISL Trigger: CAGAGAAATGGGAGATGCCCAGCCTGCAACATTTGA...CAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCTTCCTTGTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCGCAAATGTGAAGTCTTaGGAGAAAGTCCTTGCTATC | + |
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Preference number: 2 (lower is better) Translates to: IKLVSTESLPSAVNRRQSANVKS*EKVLAI Trigger: GATAGCAAGGACTTTCTCCCAAGACTTCACATTTGC...GGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCAGCATGCAGCAATTGTaGCAAGAAGGTAAGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: IKLVSTESLPSAVNRRQSSMQQL*QEGKLK Trigger: TTTCAACTTACCTTCTTGGCACAATTGCTGCATGCT...GGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACATGTTGCCAGCTTGCTTTATAGCCTaGTGGATAGACTCCATTATT | + |
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Preference number: 2 (lower is better) Translates to: LTSPCNRYAHGTQTYMLPACFIA*WIDSII Trigger: AATAATGGAGTCTATCCAGCAGGCTATAAAGCAAGC...TGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | AATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCATCTCCCATTTCTCTaGCATCCAATTCAGACACTT | + |
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Preference number: 2 (lower is better) Translates to: NQAGVNRVTALCSKQKTVHLPFL*HPIQTL Trigger: AAGTGTCTGAATTGGATGGCAGAGAAATGGGAGATG...GACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | CTGACTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACATGTTGCCACATTATTCTACAAGCTaGATGTCGAAAGTCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: LTSPCNRYAHGTQTYMLPHYSTS*MSKVKC Trigger: GCATTTGACTTTCGACATTCAGCTTGTAGAATAATG...TGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACATGTTGCCAAGATTTATCAAAGGCTGTaGGATGAAAGATTCCAACGT | + |
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Preference number: 2 (lower is better) Translates to: DFPMQQVCTWYADIHVAKIYQRL*DERFQR Trigger: ACGTTGGAATCTTTCATCCCACAGCCTTTGATAAAT...CTTGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGGAGATAACAGCATGCAGCAATTGTGCCAAGAAGGTAAGTTGAAAAGGAATAAAAGGCTGCATTTCTaGTCAGTAGGGGCAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: AGDNSMQQLCQEGKLKRNKRLHF*SVGANV Trigger: CACATTTGCCCCTACTGACCAGAAATGCAGCCTTTT...ATTCCTTTTCAACTTACCTTCTTGGCACAATTGCTGCATGCTGTTATCTCCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | CAGACACAAGGAAGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGAGCATGCAGCAATTGTaGCAAGAAGGTAAGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: QTQGRRDRVCWSSDGEKLSMQQL*QEGKLK Trigger: TTTCAACTTACCTTCTTGGCACAATTGCTGCATGCT...CAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCTTCCTTGTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATGTGATTTTTCTCTCCTaGTCTAGCCTTCCCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: EDELLIPSTYMVVQNHLYVIFLS*SSLPPS Trigger: GGAAGGGGGAAGGCTAGAGCAGGAGAGAAAAATCAC...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATTCAAAGGCTGTGGGATaGAAGATTCCAACGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: EDELLIPSTYMVVQNHLYSKAVG*KIPTSV Trigger: GACAGACGTTGGAATCTTTCATCCCACAGCCTTTGA...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATAGAGTCACTGCCCTCTaGAGTAAACAGAAGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: EDELLIPSTYMVVQNHLYRVTAL*SKQKTV Trigger: GACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCT...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGCTCAGCAGTTAACAGCACTTGTTGCTTATACAGAAGACGAGCTTTTGATTAGAGTCACTGCCCTCTaGAGTAAACAGAAGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: IAQQLTALVAYTEDELLIRVTAL*SKQKTV Trigger: GACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCT...AATCAAAAGCTCGTCTTCTGTATAAGCAACAAGTGCTGTTAACTGCTGAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | AATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCTTACAAAATTCGCCTTaGCTTTTTCTTGTACTCATC | + |
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Preference number: 2 (lower is better) Translates to: NQAGVNRVTALCSKQKTVLQNSP*LFLVLI Trigger: GATGAGTACAAGAAAAAGGCAAGGCGAATTTTGTAA...GACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCTGCTGGATAGACTCCATTATTCTACAAGCTGAATGTCGAAAGTCAAATAGGAGAGACAGAGTTTaGTGGTCTTCTGATGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: IACWIDSIILQAECRKSNRRDRV*WSSDGE Trigger: TTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCT...ATTTGACTTTCGACATTCAGCTTGTAGAATAATGGAGTCTATCCAGCAGGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATAGGAGAGACAGAGTTTaGTGGTCTTCTGATGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: EDELLIPSTYMVVQNHLYRRDRV*WSSDGE Trigger: TTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCT...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR CAA 90 bp | GCTCAGCAGTTAACAGCACTTGTTGCTTATACAGAAGACGAGCTTTaGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATATC | + |
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Preference number: 2 (lower is better) Translates to: AQQLTALVAYTEDEL*IPSTYMVVQNHLYI Trigger: GATATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTCTGTATAAGCAACAAGTGCTGTTAACTGCTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| 3UTR-3UTR GCA 90 bp | AGACACAAGGAAGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGTCCTACTAAAAGATTCTaGAGATTTGATGAGGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RHKEGETEFAGLLMEKSCPTKRF*RFDEET Trigger: TGTTTCCTCATCAAATCTGCAGAATCTTTTAGTAGG...ACAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCTTCCTTGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATAGAGACAGAGTTTGCTaGTCTTCTGATGGAGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EDELLIPSTYMVVQNHLYRDRVC*SSDGEK Trigger: CTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCT...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR CAA 90 bp | GTCCTTAACTTAACACAGAACAACTCCGCAAACAAGAAACCTATTTaGCTAGAACTAGAAATTGTGCTGCTTAAGAAGTTAGCCTCCGAA | + |
|
Preference number: 2 (lower is better) Translates to: VLNLTQNNSANKKPI*LELEIVLLKKLASE Trigger: TTCGGAGGCTAACTTCTTAAGCAGCACAATTTCTAGTTCTAGCAAAATAGGTTTCTTGTTTGCGGAGTTGTTCTGTGTTAAGTTAAGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATTGTGCTGCTTAAGAAGTTAGCCTCCGAATACCAATTATTCCTACTAAAATCGCTGATCACATCTTaGTTTTCAGCCTTGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: EIVLLKKLASEYQLFLLKSLITS*FSALES Trigger: GCTTTCCAAGGCTGAAAATCAAGATGTGATCAGCGA...TTTTAGTAGGAATAATTGGTATTCGGAGGCTAACTTCTTAAGCAGCACAATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATTGTGCTGCTTAAGAAGTTAGCCTCCGAATACCAATTATTCCTACTAAAAACAACTAACACGTGGTaGGCTCAGAAAATATGCATT | + |
|
Preference number: 2 (lower is better) Translates to: EIVLLKKLASEYQLFLLKTTNTW*AQKICI Trigger: AATGCATATTTTCTGAGCTCACCACGTGTTAGTTGT...TTTTAGTAGGAATAATTGGTATTCGGAGGCTAACTTCTTAAGCAGCACAATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR CCA 72 bp | GCTCGACTTTTATCCGTGGATTCAAGGGAAGGTGGGTaGGAGCTGGTAGCTCAGTCCATTCCTGGAACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ARLLSVDSREGG*ELVAQSIPGTK Trigger: CTTAGTTCCAGGAATGGACTGAGCTACCAGCTCCCACCCACCTTCCCTTGAATCCACGGATAAAAGTCGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCTCTCCTCCCTACATCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGTGTCCTGTTCCTCAATaGGTTCTTGATCTGTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SLSPPYIILEEGLARQPRCPVPQ*VLDLSV Trigger: TACTGACAGATCAAGAACCAATTGAGGAACAGGACA...CCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGATGTAGGGAGGAGAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR TCA 72 bp | TCATCCTTGAGGAGGGTCTTGCTAGGCAGCCAAGGCTaGCTTGAATTTATAATTCTTCCACCTCAGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLRRVLLGSQG*LEFIILPPQPP Trigger: TGGGGGCTGAGGTGGAAGAATTATAAATTCAAGTCAGCCTTGGCTGCCTAGCAAGACCCTCCTCAAGGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR CCA 72 bp | GGAGCGTCAACTAACACCTTGTCAAATGTTGCAGGCTaGGCATCTCCCATTTCTCTGCCATCCAATTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GASTNTLSNVAG*ASPISLPSNSD Trigger: GTCTGAATTGGATGGCAGAGAAATGGGAGATGCCCAGCCTGCAACATTTGACAAGGTGTTAGTTGACGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCTTAACTTGCCAAGAAGGTAAGTaGAAAAGGAATAGCCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVSTESLPSAVNRRQSLTCQEGK*KRNSRV Trigger: CACACGGCTATTCCTTTTCAACTTACCTTCTTGGCA...AGTTAAGGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR TCA 72 bp | CAGGTACGATGTTACTGTCGGAAGTTAAGACCTCGCTaGTCACATCTTGATTTTCAGCCTTGGAAAGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QVRCYCRKLRPR*SHLDFQPWKAC Trigger: GCACGCTTTCCAAGGCTGAAAATCAAGATGTGATCAGCGAGGTCTTAACTTCCGACAGTAACATCGTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
||
| 3UTR GCA 72 bp | CTTGAATTTATAATTCTTCCACCTCAGCCCCCAAAATaGTGTGACTACAGGTGTGCAGTGCCATGTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEFIILPPQPPK*CDYRCAVPCLP Trigger: TGGCAGACATGGCACTGCACACCTGTAGTCACAGCATTTTGGGGGCTGAGGTGGAAGAATTATAAATTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR GCA 72 bp | CTGATGTCCAGTTCTGACTTCCCCATGCAACAGGTATaGACATGGTACGCAGACATACATGTTGCCAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: LMSSSDFPMQQV*TWYADIHVAKI Trigger: TATCTTGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTCAGAACTGGACATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR GCA 72 bp | TTTTTCCAGGCGGGAGATAACAGCATGCAGCAATTGTaGCAAGAAGGTAAGTTGAAAAGGAATAGCCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FFQAGDNSMQQL*QEGKLKRNSRV Trigger: CACACGGCTATTCCTTTTCAACTTACCTTCTTGGCACAATTGCTGCATGCTGTTATCTCCCGCCTGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR GCA 72 bp | AGAAATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTaGAGTAAACAGAAGACAGTCCTTAACTTAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: RNQAGVNRVTAL*SKQKTVLNLTQ Trigger: CTGTGTTAAGTTAAGGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR TCA 72 bp | TATAGCCTGCTGGATAGACTCCATTATTCTACAAGCTaGATGTCGAAAGTCAAATGCGTGCGTGTGAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: YSLLDRLHYSTS*MSKVKCVRVNL Trigger: CAGATTCACACGCACGCATTTGACTTTCGACATTCAGCTTGTAGAATAATGGAGTCTATCCAGCAGGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR TCA 72 bp | TTCAAAACCATCTATATATCTCAGTTCTGGAGGACCTaGTGTCCAGTTCTGACTTCCCCATGCAACAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FKTIYISQFWRT*CPVLTSPCNRY Trigger: ATACCTGTTGCATGGGGAAGTCAGAACTGGACATCAGGTCCTCCAGAACTGAGATATATAGATGGTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR CCA 72 bp | TCCAGTTCTGACTTCCCCATGCAACAGGTATGCACATaGTACGCAGACATACATGTTGCCAAGATATTTATA | + |
|
Preference number: 3 (lower is better) Translates to: SSSDFPMQQVCT*YADIHVAKIFI Trigger: TATAAATATCTTGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTCAGAACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATAGAAGCCATAGCCAATaGTGGGGAGGAAGGAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: EDELLIPSTYMVVQNHLYRSHSQ*WGGRNK Trigger: CTTATTCCTTCCTCCCCACAATTGGCTATGGCTTCT...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAATTGTGCTGCTTAAGAAGTTAGCCTCCGAATACCAATTATTCCTACTAAAAACACCTTGTCAAATGTaGCAGGCTGGGCATCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EIVLLKKLASEYQLFLLKTPCQM*QAGHLP Trigger: TGGGAGATGCCCAGCCTGCAACATTTGACAAGGTGT...TTTTAGTAGGAATAATTGGTATTCGGAGGCTAACTTCTTAAGCAGCACAATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTCAGCAGTTAACAGCACTTGTTGCTTATACAGAAGACGAGCTTTTGATTGCCAGCTTCGATCATTaGAACATGGAGCGTCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: IAQQLTALVAYTEDELLIASFDH*NMERQL Trigger: TAGTTGACGCTCCATGTTCAAATGATCGAAGCTGGC...AATCAAAAGCTCGTCTTCTGTATAAGCAACAAGTGCTGTTAACTGCTGAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATTGCCAAGAAGGTAAGTaGAAAAGGAATAGCCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: EDELLIPSTYMVVQNHLYCQEGK*KRNSRV Trigger: CACACGGCTATTCCTTTTCAACTTACCTTCTTGGCA...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCCTGCTGGATAGACTCCATTATTCTACAAGCTGAATGTCGAAAGTCAAATTGTCCTGTTCCTCAATaGGTTCTTGATCTGTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IACWIDSIILQAECRKSNCPVPQ*VLDLSV Trigger: TACTGACAGATCAAGAACCAATTGAGGAACAGGACA...ATTTGACTTTCGACATTCAGCTTGTAGAATAATGGAGTCTATCCAGCAGGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR CCA 72 bp | TCTGGTTTTGTTTCAAGTGCTTGCTTTATAGCCTGCTaGATAGACTCCATTATTCTACAAGCTGAATGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: SGFVSSACFIAC*IDSIILQAECR Trigger: TCGACATTCAGCTTGTAGAATAATGGAGTCTATCCAGCAGGCTATAAAGCAAGCACTTGAAACAAAACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR GCA 72 bp | AGCCTCCGAATACCAATTATTCCTACTAAAAGATTCTaGAGATTTGATGAGGAAACAGTAAAAGTGTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SLRIPIIPTKRF*RFDEETVKVLT Trigger: TGTCAACACTTTTACTGTTTCCTCATCAAATCTGCAGAATCTTTTAGTAGGAATAATTGGTATTCGGAGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGCCACACAGGCTGCTCTTATAGACCGGTGGTCAGGGGAGTTTAGCAGCCTCTGCATAGCTGTTTaGCAAGCTTCCCCTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GVATQAALIDRWSGEFSSLCIAV*QASPLI Trigger: AATCAGAGGGGAAGCTTGCCAAACAGCTATGCAGAG...GCTGCTAAACTCCCCTGACCACCGGTCTATAAGAGCAGCCTGTGTGGCCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGCCACACAGGCTGCTCTTATAGACCGGTGGTCAGGGGAGTTTAGCAGCTACTGTTTGTCAAACTaGTCCAACACAACTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVATQAALIDRWSGEFSSYCLSN*SNTTLH Trigger: ATGCAGAGTTGTGTTGGATCAGTTTGACAAACAGTA...GCTGCTAAACTCCCCTGACCACCGGTCTATAAGAGCAGCCTGTGTGGCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACATGTTGCCAGCAGAGCTACGGATTTaGCTCCAGGAGCAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LTSPCNRYAHGTQTYMLPAELRI*LQEQHT Trigger: TGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGC...TGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCTATATACATTGGGCCCCAAGCTTTGCCCTTTTCCGGAATCACCAAAAGCAGAGCTACGGATTTaGCTCCAGGAGCAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VWLYTLGPKLCPFPESPKAELRI*LQEQHT Trigger: TGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGC...TTTTGGTGATTCCGGAAAAGGGCAAAGCTTGGGGCCCAATGTATATAGCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
||
| CDS-3UTR TCA 90 bp | AATCAAGCTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCGGTCTGGGGTTCGGCTaGGGTAACACTTCATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: NQAGVNRVTALCSKQKTVGLGFG*GNTSLI Trigger: AATCAATGAAGTGTTACCTCAGCCGAACCCCAGACC...GACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAGCTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| CDS-3UTR GCA 90 bp | ATAGCCAATTGTGGGGAGGAAGGAATAAGTGAAACTTCCAGGTCCCTGAAGGAACACCTTGTCAAATGTTaGAGGCTGGGCATCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IANCGEEGISETSRSLKEHLVKC*RLGISH Trigger: ATGGGAGATGCCCAGCCTGCAACATTTGACAAGGTG...TTCCTTCAGGGACCTGGAAGTTTCACTTATTCCTTCCTCCCCACAATTGGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| CDS-3UTR CCA 90 bp | GACTTCCCCATGCAACAGGTATGCACATGGTACGCAGACATACATGTTGCCAAGTTTGGCTATATACATTaGGCCCCAAGCTTTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DFPMQQVCTWYADIHVAKFGYIH*APSFAL Trigger: AAGGGCAAAGCTTGGGGCCCAATGTATATAGCCAAA...CTTGGCAACATGTATGTCTGCGTACCATGTGCATACCTGTTGCATGGGGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGTCCAGCCATGTGGATCCAACACAACTCTaGATAGCTGTTTGGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRDRVCWSSDGEKLSSHVDPTQL*IAVWQA Trigger: AGCTTGCCAAACAGCTATGCAGAGTTGTGTTGGATC...CACATGGCTGGACAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR CAA 72 bp | TCTGAGAGTCCGACGAGAACAGCCAGCTTCGATCATTaGAACATGGAGCGTCAACTAACACCTTGTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SESPTRTASFDH*NMERQLTPCQM Trigger: CATTTGACAAGGTGTTAGTTGACGCTCCATGTTCAAATGATCGAAGCTGGCTGTTCTCGTCGGACTCTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCTCAGCAGTTAACAGCACTTGTTGCTTATACAGAAGACGAGCTTTTGATTACACAAGTCCAGGACTaGCTCCCCGTCTCTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IAQQLTALVAYTEDELLITQVQD*LPVSQF Trigger: GAACTGAGAGACGGGGAGGCAGTCCTGGACTTGTGT...AATCAAAAGCTCGTCTTCTGTATAAGCAACAAGTGCTGTTAACTGCTGAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATACACAAGTCCAGGACTaGCTCCCCGTCTCTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDELLIPSTYMVVQNHLYTQVQD*LPVSQF Trigger: GAACTGAGAGACGGGGAGGCAGTCCTGGACTTGTGT...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR CCA 90 bp | AGACACAAGGAAGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGTAAAAGGCTGCATTTCTaGTCAGTAGGGGCAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHKEGETEFAGLLMEKSCKRLHF*SVGANV Trigger: CACATTTGCCCCTACTGACCAGAAATGCAGCCTTTT...ACAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCTTCCTTGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| 3UTR CAA 72 bp | GATAACAGCATGCAGCAATTGTGCCAAGAAGGTAAGTaGAAAAGGAATAGCCGTGTGATGTGTGTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DNSMQQLCQEGK*KRNSRVMCVCV Trigger: CACACACACACACATCACACGGCTATTCCTTTTCAACTTACCTTCTTGGCACAATTGCTGCATGCTGTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| 3UTR CAA 72 bp | ATGTTTTTCCAGGCGGGAGATAACAGCATGCAGCAATaGTGCCAAGAAGGTAAGTTGAAAAGGAATAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: MFFQAGDNSMQQ*CQEGKLKRNSR Trigger: ACGGCTATTCCTTTTCAACTTACCTTCTTGGCACAATTGCTGCATGCTGTTATCTCCCGCCTGGAAAAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCAGCAGTTAACAGCACTTGTTGCTTATACAGAAGACGAGCTTTTGATTAGTCTGATGTCTTTCTaGAGGCATTCGGTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IAQQLTALVAYTEDELLISLMSF*RHSVWG Trigger: ACCCCAGACCGAATGCCTTCAGAAAGACATCAGACT...AATCAAAAGCTCGTCTTCTGTATAAGCAACAAGTGCTGTTAACTGCTGAGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| CDS-3UTR GCA 90 bp | ATAGCCAATTGTGGGGAGGAAGGAATAAGTGAAACTTCCAGGTCCCTGAAGGAAAAGAGGATGGCATATTaGCATAGTGATGGAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: IANCGEEGISETSRSLKEKRMAY*HSDGDI Trigger: GATATCTCCATCACTATGGCAATATGCCATCCTCTT...TTCCTTCAGGGACCTGGAAGTTTCACTTATTCCTTCCTCCCCACAATTGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGTCCAGCCATGTGTTACAAAATTCGCCTTaGCTTTTTCTTGTACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RRDRVCWSSDGEKLSSHVLQNSP*LFLVLI Trigger: GATGAGTACAAGAAAAAGGCAAGGCGAATTTTGTAA...CACATGGCTGGACAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| CDS-3UTR CCA 90 bp | ATAGCTCAGCAGTTAACAGCACTTGTTGCTTATACAGAAGACGAGCTTTTGATTCTCTGCATAGCTGTTTaGCAAGCTTCCCCTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: IAQQLTALVAYTEDELLILCIAV*QASPLI Trigger: AATCAGAGGGGAAGCTTGCCAAACAGCTATGCAGAG...AATCAAAAGCTCGTCTTCTGTATAAGCAACAAGTGCTGTTAACTGCTGAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCCTGCTGGATAGACTCCATTATTCTACAAGCTGAATGTCGAAAGTCAAATTCAAATGTTGCAGGCTaGGCATCTCCCATTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IACWIDSIILQAECRKSNSNVAG*ASPISL Trigger: CAGAGAAATGGGAGATGCCCAGCCTGCAACATTTGA...ATTTGACTTTCGACATTCAGCTTGTAGAATAATGGAGTCTATCCAGCAGGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
||
| CDS-3UTR GCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATGATCCAACACAACTCTaGATAGCTGTTTGGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDELLIPSTYMVVQNHLYDPTQL*IAVWQA Trigger: AGCTTGCCAAACAGCTATGCAGAGTTGTGTTGGATC...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACGAGCTTTTGATTCCAAGCACCTATATGGTGGTTCAAAACCATCTATATGCAAATGTGAAGTCTTaGGAGAAAGTCCTTGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: EDELLIPSTYMVVQNHLYANVKS*EKVLAI Trigger: GATAGCAAGGACTTTCTCCCAAGACTTCACATTTGC...ATATAGATGGTTTTGAACCACCATATAGGTGCTTGGAATCAAAAGCTCGTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS-3UTR TCA 90 bp | ATAGCTCAGCAGTTAACAGCACTTGTTGCTTATACAGAAGACGAGCTTTTGATTTACTGTTTGTCAAACTaGTCCAACACAACTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: IAQQLTALVAYTEDELLIYCLSN*SNTTLH Trigger: ATGCAGAGTTGTGTTGGATCAGTTTGACAAACAGTA...AATCAAAAGCTCGTCTTCTGTATAAGCAACAAGTGCTGTTAACTGCTGAGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS-3UTR GCA 90 bp | GAAATTGTGCTGCTTAAGAAGTTAGCCTCCGAATACCAATTATTCCTACTAAAACATCTCCCATTTCTCTaGCATCCAATTCAGACACTT | + |
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Preference number: 4 (lower is better) Translates to: EIVLLKKLASEYQLFLLKHLPFL*HPIQTL Trigger: AAGTGTCTGAATTGGATGGCAGAGAAATGGGAGATG...TTTTAGTAGGAATAATTGGTATTCGGAGGCTAACTTCTTAAGCAGCACAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS-3UTR CCA 90 bp | ATAGCCTGCTGGATAGACTCCATTATTCTACAAGCTGAATGTCGAAAGTCAAATATTTATCAAAGGCTGTaGGATGAAAGATTCCAACGT | + |
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Preference number: 4 (lower is better) Translates to: IACWIDSIILQAECRKSNIYQRL*DERFQR Trigger: ACGTTGGAATCTTTCATCCCACAGCCTTTGATAAAT...ATTTGACTTTCGACATTCAGCTTGTAGAATAATGGAGTCTATCCAGCAGGCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS-3UTR CAA 90 bp | GGGGTGGCCACACAGGCTGCTCTTATAGACCGGTGGTCAGGGGAGTTTAGCAGCAGCAGAGCTACGGATTaGCCTCCAGGAGCAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: GVATQAALIDRWSGEFSSSRATD*PPGAAH Trigger: GTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGCT...GCTGCTAAACTCCCCTGACCACCGGTCTATAAGAGCAGCCTGTGTGGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS GCA 90 bp | CAGAGCTACGGATTTGCCTCCAGGAGCAGCACACAAGTCCAGGACTaGCTCCCCGTCTCTCAGTTCCAGAGCCAGTACTGGGAGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: QSYGFASRSSTQVQD*LPVSQFQSQYWEKR Trigger: TCTCTTCTCCCAGTACTGGCTCTGGAACTGAGAGACGGGGAGGCAGTCCTGGACTTGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS GCA 90 bp | GGCTCTAAGGACCTGGATAAGCACATTGCAGCAGAGCTACGGATTTaGCTCCAGGAGCAGCACACAAGTCCAGGACTGCCTCCCCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GSKDLDKHIAAELRI*LQEQHTSPGLPPRL Trigger: GAGACGGGGAGGCAGTCCTGGACTTGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGTCCTTAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152553.2 |
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| CDS GCA 90 bp | CAGAGCTACGGATTTGCCTCCAGGAGCAGCACACAAGTCCAGGACTaGCTCCCCGTCTCTCAGTTCCAGAGCCAGTACTTACTGTACTCC | + |
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Preference number: 5 (lower is better) Translates to: QSYGFASRSSTQVQD*LPVSQFQSQYLLYS Trigger: GGAGTACAGTAAGTACTGGCTCTGGAACTGAGAGACGGGGAGGCAGTCCTGGACTTGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143314.8 ENSMUST00000152553.2 |
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| CDS-3UTR CAA 90 bp | GGGGTGGCCACACAGGCTGCTCTTATAGACCGGTGGTCAGGGGAGTTTAGCAGCACTCTGCATAGCTGTTaGGCAAGCTTCCCCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: GVATQAALIDRWSGEFSSTLHSC*ASFPSD Trigger: ATCAGAGGGGAAGCTTGCCAAACAGCTATGCAGAGT...GCTGCTAAACTCCCCTGACCACCGGTCTATAAGAGCAGCCTGTGTGGCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS GCA 90 bp | AGAGAAGATAACCTGGATAAGCACATTGCAGCAGAGCTACGGATTTaGCTCCAGGAGCAGCACACAAGTCCAGGACTGCCTCCCCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: REDNLDKHIAAELRI*LQEQHTSPGLPPRL Trigger: GAGACGGGGAGGCAGTCCTGGACTTGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGTTATCTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS CCA 90 bp | CAAGTCCAGGACTGCCTCCCCGTCTCTCAGTTCCAGAGCCAGTACTaGGAGAAGAGAAGCAGCATTAAGGAGGTAGTACTTTTTCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: QVQDCLPVSQFQSQY*EKRSSIKEVVLFQA Trigger: AGCTTGAAAAAGTACTACCTCCTTAATGCTGCTTCTCTTCTCCCAGTACTGGCTCTGGAACTGAGAGACGGGGAGGCAGTCCTGGACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS-3UTR CAA 90 bp | CTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCTTAACTATTGGGCCCCAAGCTTaGCCCTTTTCCGGAATCACC | + |
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Preference number: 5 (lower is better) Translates to: LVSTESLPSAVNRRQSLTIGPQA*PFSGIT Trigger: GGTGATTCCGGAAAAGGGCAAAGCTTGGGGCCCAAT...AGTTAAGGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS-3UTR CAA 90 bp | CTGGTGTCAACAGAGTCACTGCCCTCTGCAGTAAACAGAAGACAGTCCTTAACTGCTTCCCCTCTGATTTaGCTTTCAGCCGAGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LVSTESLPSAVNRRQSLTASPLI*LSAESA Trigger: TGCTGACTCGGCTGAAAGCAAAATCAGAGGGGAAGC...AGTTAAGGACTGTCTTCTGTTTACTGCAGAGGGCAGTGACTCTGTTGACACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS-3UTR CAA 90 bp | GTTTGGCTATATACATTGGGCCCCAAGCTTTGCCCTTTTCCGGAATCACCAAAAGCTTCCCCTCTGATTTaGCTTTCAGCCGAGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VWLYTLGPKLCPFPESPKASPLI*LSAESA Trigger: TGCTGACTCGGCTGAAAGCAAAATCAGAGGGGAAGC...TTTTGGTGATTCCGGAAAAGGGCAAAGCTTGGGGCCCAATGTATATAGCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000143314.8 |
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| CDS-3UTR CAA 90 bp | ATAGCCAATTGTGGGGAGGAAGGAATAAGTGAAACTTCCAGGTCCCTGAAGGAAACACCTTGTCAAATGTaGCAGGCTGGGCATCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: IANCGEEGISETSRSLKETPCQM*QAGHLP Trigger: TGGGAGATGCCCAGCCTGCAACATTTGACAAGGTGT...TTCCTTCAGGGACCTGGAAGTTTCACTTATTCCTTCCTCCCCACAATTGGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS-3UTR CAA 90 bp | CAGACACAAGGAAGGAGAGACAGAGTTTGCTGGTCTTCTGATGGAGAAAAGTTGGCCAGCTTCGATCATTaGAACATGGAGCGTCAACTA | + |
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Preference number: 5 (lower is better) Translates to: QTQGRRDRVCWSSDGEKLASFDH*NMERQL Trigger: TAGTTGACGCTCCATGTTCAAATGATCGAAGCTGGC...CAACTTTTCTCCATCAGAAGACCAGCAAACTCTGTCTCTCCTTCCTTGTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS TCA 90 bp | GTACTCCAGGAATCCCCAAGTTCTTTCGAATACTGTTTGTCAAACTaGTCCAACACAACTCTGCATAGCTGTTTGGCAAGCTTCCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: VLQESPSSFEYCLSN*SNTTLHSCLASFPS Trigger: AGAGGGGAAGCTTGCCAAACAGCTATGCAGAGTTGTGTTGGATCAGTTTGACAAACAGTATTCGAAAGAACTTGGGGATTCCTGGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 ENSMUST00000152553.2 |
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| CDS-3UTR CAA 90 bp | AACAGCATGCAGCAATTGTGCCAAGAAGGTAAGTTGAAAAGGAATAGCCGTGTGACCTGGATAAGCACATaGCAGCAGAGCTACGGATTT | + |
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Preference number: 5 (lower is better) Translates to: NSMQQLCQEGKLKRNSRVTWIST*QQSYGF Trigger: AAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGT...CACACGGCTATTCCTTTTCAACTTACCTTCTTGGCACAATTGCTGCATGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS GCA 90 bp | CAAGTTCTTTCGAATACTGTTTGTCAAACTGATCCAACACAACTCTaGATAGCTGTTTGGCAAGCTTCCCCTCTGATTTTGCTTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QVLSNTVCQTDPTQL*IAVWQASPLILLSA Trigger: GGCTGAAAGCAAAATCAGAGGGGAAGCTTGCCAAACAGCTATGCAGAGTTGTGTTGGATCAGTTTGACAAACAGTATTCGAAAGAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 ENSMUST00000152553.2 |
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| CDS-3UTR CAA 90 bp | ATAGCCTGCTGGATAGACTCCATTATTCTACAAGCTGAATGTCGAAAGTCAAATACTCTGCATAGCTGTTaGGCAAGCTTCCCCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: IACWIDSIILQAECRKSNTLHSC*ASFPSD Trigger: ATCAGAGGGGAAGCTTGCCAAACAGCTATGCAGAGT...ATTTGACTTTCGACATTCAGCTTGTAGAATAATGGAGTCTATCCAGCAGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS-3UTR CAA 90 bp | GAAATTGTGCTGCTTAAGAAGTTAGCCTCCGAATACCAATTATTCCTACTAAAAACCTGGATAAGCACATaGCAGCAGAGCTACGGATTT | + |
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Preference number: 5 (lower is better) Translates to: EIVLLKKLASEYQLFLLKTWIST*QQSYGF Trigger: AAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGT...TTTTAGTAGGAATAATTGGTATTCGGAGGCTAACTTCTTAAGCAGCACAATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS GCA 72 bp | GACCTGGATAAGCACATTGCAGCAGAGCTACGGATTTaGCTCCAGGAGCAGCACACAAGTCCAGGACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: DLDKHIAAELRI*LQEQHTSPGLP Trigger: AGGCAGTCCTGGACTTGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152553.2 |
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| CDS GCA 72 bp | AACCTGGATAAGCACATTGCAGCAGAGCTACGGATTTaGCTCCAGGAGCAGCACACAAGTCCAGGACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NLDKHIAAELRI*LQEQHTSPGLP Trigger: AGGCAGTCCTGGACTTGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063089.12 ENSMUST00000143314.8 |
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| CDS CAA 90 bp | CGGGCGATCATACTCGTTACAGAGAAGATAACCTGGATAAGCACATaGCAGCAGAGCTACGGATTTGCCTCCAGGAGCAGCACACAAGTC | + |
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Preference number: 6 (lower is better) Translates to: RAIILVTEKITWIST*QQSYGFASRSSTQV Trigger: GACTTGTGTGCTGCTCCTGGAGGCAAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGTTATCTTCTCTGTAACGAGTATGATCGCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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| CDS CAA 72 bp | ATACTCGTTACAGAGAAGATAACCTGGATAAGCACATaGCAGCAGAGCTACGGATTTGCCTCCAGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ILVTEKITWIST*QQSYGFASRSS Trigger: GCTGCTCCTGGAGGCAAATCCGTAGCTCTGCTGCAATGTGCTTATCCAGGTTATCTTCTCTGTAACGAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063089.12 |
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