Pregenerated sensors for NSRP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037958Ensembl transcript IDs: ENSMUST00000102494.8
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAAATTGGGCCTAGGGCTGGTCACTGCCTACAGTTCTAGCACTTaGGGGGCTGAGACACAAGGATCACTTGAGCACAGGATTTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: DKLGLGLVTAYSSST*GAETQGSLEHRISR Trigger: TCTAGAAATCCTGTGCTCAAGTGATCCTTGTGTCTCAGCCCCTCAAGTGCTAGAACTGTAGGCAGTGACCAGCCCTAGGCCCAATTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR CCA 90 bp | CAAACAACAACAACAACAACCAAAATCTCCTCAGAGCCTGAGAGATaGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTTTAATT | + |
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Preference number: 1 (lower is better) Translates to: QTTTTTTKISSEPER*LRALAAHTEDPGLI Trigger: AATTAAACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGAGGAGATTTTGGTTGTTGTTGTTGTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR TCA 90 bp | ATCTCAGCAACCACATGGTGGCTCACAACCATCCGTAATAAGATCTaGAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTA | + |
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Preference number: 1 (lower is better) Translates to: ISATTWWLTTIRNKI*SPLLQCLKTATVYL Trigger: TAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAGATCTTATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR TCA 90 bp | TTATTTAAGCCAAGTATGCTGTGGAGCAAAAAGTTTAAACATGCATaGTCTAGGGCTGGGGAGATGGCTCAGTGGTTAAGCGCACTGACT | + |
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Preference number: 1 (lower is better) Translates to: LFKPSMLWSKKFKHA*SRAGEMAQWLSALT Trigger: AGTCAGTGCGCTTAACCACTGAGCCATCTCCCCAGCCCTAGATCATGCATGTTTAAACTTTTTGCTCCACAGCATACTTGGCTTAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTAGCCACCCGGTGCACTaGCTTACATGTAGGCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SEPERWLRALAAHTEDPGSHPVH*LTCRQN Trigger: GTTTTGCCTACATGTAAGTCAGTGCACCGGGTGGCT...ACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTTCCAGTGCTTTCTTCTaGCCTTCTCTGTGGGTACTA | + |
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Preference number: 2 (lower is better) Translates to: SEPERWLRALAAHTEDPGSSAFF*PSLWVL Trigger: TAGTACCCACAGAGAAGGCCAGAAGAAAGCACTGGA...ACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAGCGCACTGACTACTCCTCCAAAGGTTCTGAGTTCAAATCTCAGCAACCACTTCTGGCCTTCTCTGTaGGTACTAGGCAGCCACCCG | + |
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Preference number: 2 (lower is better) Translates to: LSALTTPPKVLSSNLSNHFWPSL*VLGSHP Trigger: CGGGTGGCTGCCTAGTACCCACAGAGAAGGCCAGAA...GTGGTTGCTGAGATTTGAACTCAGAACCTTTGGAGGAGTAGTCAGTGCGCTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR CAA 90 bp | CTGCCTACAGTTCTAGCACTTGAGGGGCTGAGACACAAGGATCACTaGAGCACAGGATTTCTAGAACAGCCTGGGCAACAGAGCATAACA | + |
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Preference number: 2 (lower is better) Translates to: LPTVLALEGLRHKDH*STGFLEQPGQQSIT Trigger: TGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCCTTGTGTCTCAGCCCCTCAAGTGCTAGAACTGTAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR CCA 90 bp | GGATCACTTGAGCACAGGATTTCTAGAACAGCCTGGGCAACAGAGCATAACAACTCAGAGCCTGAGAGATaGTTAAGAGCACTGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GSLEHRISRTAWATEHNNSEPER*LRALAA Trigger: GGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA...GTTGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR GCA 90 bp | GGATCACTTGAGCACAGGATTTCTAGAACAGCCTGGGCAACAGAGCATAACAACACAATGCTCTACGCTTaGAAGGGACTCCAGATATGG | + |
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Preference number: 2 (lower is better) Translates to: GSLEHRISRTAWATEHNNTMLYA*KGLQIW Trigger: CCATATCTGGAGTCCCTTGCAAGCGTAGAGCATTGT...GTTGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTAACTCCAGGACCTTGTaGATGCCAGGCAAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSNSRTL*MPGKSS Trigger: AGAGCTCTTGCCTGGCATGCACAAGGTCCTGGAGTT...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATAACACCTTTGACTCTTaGGTAAAACCAAGAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNNTFDS*VKPRKC Trigger: GCACTTTCTTGGTTTTACTCAAGAGTCAAAGGTGTT...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTTACAGTTCTAGCACTTaGGGGGCTGAGACACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSYSSST*GAETQG Trigger: TCCTTGTGTCTCAGCCCCTCAAGTGCTAGAACTGTA...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTCCAGTCGCTGTTCTATaGACAGTTGTATGCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSPVAVL*TVVCFL Trigger: AAGAAAGCATACAACTGTTCATAGAACAGCGACTGG...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR TCA 72 bp | GGCCTAGGGCTGGTCACTGCCTACAGTTCTAGCACTTaGGGGGCTGAGACACAAGGATCACTTGAGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: GLGLVTAYSSST*GAETQGSLEHR Trigger: CCTGTGCTCAAGTGATCCTTGTGTCTCAGCCCCTCAAGTGCTAGAACTGTAGGCAGTGACCAGCCCTAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR GCA 72 bp | TCACAGCCATCTATGACTTCAGTTCCCGGGATCCAGTaGTTTCTTCTGGCCTTCTCTGTGGGTACTAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SQPSMTSVPGIQ*FLLAFSVGTRQ Trigger: CTGCCTAGTACCCACAGAGAAGGCCAGAAGAAAGCACTGGATCCCGGGAACTGAAGTCATAGATGGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR CCA 72 bp | ACAACAACAACCAAAATCTCCTCAGAGCCTGAGAGATaGTTAAGAGCACTGGCTGCCCATACGGAGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: TTTTKISSEPER*LRALAAHTEDP Trigger: TGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGAGGAGATTTTGGTTGTTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR CCA 72 bp | CAAGGATCACTTGAGCACAGGATTTCTAGAACAGCCTaGGCAACAGAGCATAACAACAATCCCCACCCCACC | + |
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Preference number: 3 (lower is better) Translates to: QGSLEHRISRTA*ATEHNNNPHPT Trigger: GGTGGGGTGGGGATTGTTGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCCGTAATAAGATCTaGAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTIRNKI*SPLLQCLKTAT Trigger: TGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAGATCTTATTACGGATGGTTGTGAGCCACCATGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR GCA 72 bp | TTTCAATCTTGGACATCAACTCCAGGACCTTGTGCATaGCAGGCAAGAGCTCTACTACTGAGCTTTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FQSWTSTPGPCA*QARALLLSFVP Trigger: AGGGACAAAGCTCAGTAGTAGAGCTCTTGCCTGGCATGCACAAGGTCCTGGAGTTGATGTCCAAGATTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR TCA 72 bp | AACAACAACAACAACAACCAAAATCTCCTCAGAGCCTaGGAGATGGTTAAGAGCACTGGCTGCCCATACGGA | + |
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Preference number: 3 (lower is better) Translates to: NNNNNNQNLLRA*EMVKSTGCPYG Trigger: TCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGAGGAGATTTTGGTTGTTGTTGTTGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | TCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTGGTCACATCCAAATGTaGTTCCAGAGCAGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SEPERWLRALAAHTEDPGGHIQM*FQSSCP Trigger: AGGGCAGCTGCTCTGGAAGCACATTTGGATGTGACC...ACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | TCTATGACTTCAGTTCCCGGGATCCAGTGCTTTCTTCTGGCCTTCTCTGTGGGTGAACCTCGTGAGTGGTaGTTGGTCCCGAGCCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: SMTSVPGIQCFLLAFSVGEPREW*LVPSPL Trigger: AAGGGGGCTCGGGACCAAGCACCACTCACGAGGTTC...ACCCACAGAGAAGGCCAGAAGAAAGCACTGGATCCCGGGAACTGAAGTCATAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | TCTATGACTTCAGTTCCCGGGATCCAGTGCTTTCTTCTGGCCTTCTCTGTGGGTCTCACTGCCCTTCTCTaGCCTTTCCTCTGCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SMTSVPGIQCFLLAFSVGLTALL*PFLCQS Trigger: AGACTGGCAGAGGAAAGGCCAGAGAAGGGCAGTGAG...ACCCACAGAGAAGGCCAGAAGAAAGCACTGGATCCCGGGAACTGAAGTCATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | ACAACAACCAAAATCTCCTCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCAGCTCTCTTGGTCTCTaGACTGCCTGTCCTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TTTKISSEPERWLRALAASSLGL*TACPGA Trigger: AGCACCAGGACAGGCAGTCCAGAGACCAAGAGAGCT...GGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGAGGAGATTTTGGTTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTAGTGATCTTTATGACTaGCCTCTCTGTGCCTATGAG | + |
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Preference number: 4 (lower is better) Translates to: SEPERWLRALAAHTEDPGSDLYD*PLCAYE Trigger: CTCATAGGCACAGAGAGGCCAGTCATAAAGATCACT...ACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTTCTGAATCTCCAATTTaGTCTGTTTCATGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SEPERWLRALAAHTEDPGSESPI*SVSWPA Trigger: AGCAGGCCATGAAACAGACCAAATTGGAGATTCAGA...ACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTCTTTTATCACAGTCCTaGCTTCACGAAAGCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: SEPERWLRALAAHTEDPGLLSQS*LHESWI Trigger: AATCCAGCTTTCGTGAAGCCAGGACTGTGATAAAAG...ACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | GGATCACTTGAGCACAGGATTTCTAGAACAGCCTGGGCAACAGAGCATAACAACCTGGACTGCCTGTCCTaGTGCTCATGTCCTCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: GSLEHRISRTAWATEHNNLDCLS*CSCPLD Trigger: GTCAAGAGGACATGAGCACCAGGACAGGCAGTCCAG...GTTGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR TCA 90 bp | TCTATGACTTCAGTTCCCGGGATCCAGTGCTTTCTTCTGGCCTTCTCTGTGGGTTGGTGGTCTGCTCTCTaGATTGGTTTCATCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SMTSVPGIQCFLLAFSVGWWSAL*IGFIRV Trigger: TACCCTGATGAAACCAATTCAGAGAGCAGACCACCA...ACCCACAGAGAAGGCCAGAAGAAAGCACTGGATCCCGGGAACTGAAGTCATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR TCA 90 bp | TCTATGACTTCAGTTCCCGGGATCCAGTGCTTTCTTCTGGCCTTCTCTGTGGGTAGTGATGTTTCAGAATaGGAGGGCTTCCCTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SMTSVPGIQCFLLAFSVGSDVSE*EGFPCS Trigger: GGAACAAGGGAAGCCCTCTCATTCTGAAACATCACT...ACCCACAGAGAAGGCCAGAAGAAAGCACTGGATCCCGGGAACTGAAGTCATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | GGATCACTTGAGCACAGGATTTCTAGAACAGCCTGGGCAACAGAGCATAACAACTCTTGGTCTCTGGACTaGCTGTCCTGGTGCTCATGT | + |
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Preference number: 4 (lower is better) Translates to: GSLEHRISRTAWATEHNNSWSLD*LSWCSC Trigger: ACATGAGCACCAGGACAGGCAGTCCAGAGACCAAGA...GTTGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | GGATCACTTGAGCACAGGATTTCTAGAACAGCCTGGGCAACAGAGCATAACAACCTTTGGTCTAGACCGTaGGCTGCTTTCCCTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GSLEHRISRTAWATEHNNLWSRP*AAFPSV Trigger: GACAGAAGGGAAAGCAGCCCACGGTCTAGACCAAAG...GTTGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR TCA 90 bp | TCTATGACTTCAGTTCCCGGGATCCAGTGCTTTCTTCTGGCCTTCTCTGTGGGTTCACTGTATCGGTCGTaGTCATTCCGTTGTCTATCT | + |
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Preference number: 4 (lower is better) Translates to: SMTSVPGIQCFLLAFSVGSLYRS*SFRCLS Trigger: AGATAGACAACGGAATGATCACGACCGATACAGTGA...ACCCACAGAGAAGGCCAGAAGAAAGCACTGGATCCCGGGAACTGAAGTCATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATTCCTGTGCACCCCTTTaGAGGACGCAGCTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNSCAPL*RTQLCC Trigger: ACAGCAGAGCTGCGTCCTGCAAAGGGGTGCACAGGA...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | ACAACAACCAAAATCTCCTCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCTCTGCTGTGGTGGTCTaGTCTCTGAATTGGTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TTTKISSEPERWLRALAASAVVV*SLNWFH Trigger: ATGAAACCAATTCAGAGAGCAGACCACCACAGCAGA...GGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGAGGAGATTTTGGTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATGACTGCCTGTCCTGGTaGTCATGTCCTCTTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNDCLSW*SCPLDW Trigger: CCAGTCAAGAGGACATGAGCACCAGGACAGGCAGTC...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATGCCTCTCTTGCTCACTaGCCTTCTCTGGCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNASLAH*PSLAFP Trigger: AGGAAAGGCCAGAGAAGGGCAGTGAGCAAGAGAGGC...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | TTAAGCGCACTGACTACTCCTCCAAAGGTTCTGAGTTCAAATCTCAGCAACCACCTGGACTTGACTTTATaGTCTCGCTTTTCACCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSALTTPPKVLSSNLSNHLDLTL*SRFSPS Trigger: GGACGGTGAAAAGCGAGACCATAAAGTCAAGTCCAG...GTGGTTGCTGAGATTTGAACTCAGAACCTTTGGAGGAGTAGTCAGTGCGCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR TCA 90 bp | TTAAGCGCACTGACTACTCCTCCAAAGGTTCTGAGTTCAAATCTCAGCAACCACCTTCTCCTCTGGACTTaGCTTTATGGTCTCGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LSALTTPPKVLSSNLSNHLLLWT*LYGLAF Trigger: AAAAGCGAGACCATAAAGTCAAGTCCAGAGGAGAAG...GTGGTTGCTGAGATTTGAACTCAGAACCTTTGGAGGAGTAGTCAGTGCGCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATTGCTTCCAGAGCAGCTaGCCTCTTTTCTCTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNCFQSS*PLFSFL Trigger: GAGGAAAGAGAAAAGAGGGCAGCTGCTCTGGAAGCA...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | ACAACAACCAAAATCTCCTCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCTGTTTCTTGCTTTGCTaGATCTTTCCTGATCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TTTKISSEPERWLRALAACFLLC*IFPDQG Trigger: ACCTTGATCAGGAAAGATCCAGCAAAGCAAGAAACA...GGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGAGGAGATTTTGGTTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTTGCAGGACGCAGCTCTaGTGTGGTGGTCTGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSCRTQL*CGGLLS Trigger: AGAGAGCAGACCACCACAGCAGAGCTGCGTCCTGCA...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATTGTCTTTCTGAAGACTaGCCATGTCCTTCTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNCLSED*PCPSGF Trigger: GAAGCCAGAAGGACATGGGCAGTCTTCAGAAAGACA...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | TTAAGCGCACTGACTACTCCTCCAAAGGTTCTGAGTTCAAATCTCAGCAACCACCTCAATATAAGTCTTTaGGTTTATCCGCGCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LSALTTPPKVLSSNLSNHLNISL*VYPRHL Trigger: CAGATGGCGCGGATAAACGCAAAGACTTATATTGAG...GTGGTTGCTGAGATTTGAACTCAGAACCTTTGGAGGAGTAGTCAGTGCGCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| 3UTR CAA 72 bp | AGTATCTACAAAACAGTTTCTGTAACAAGAGACAAATaGGGCCTAGGGCTGGTCACTGCCTACAGTTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: SIYKTVSVTRDK*GLGLVTAYSSS Trigger: GCTAGAACTGTAGGCAGTGACCAGCCCTAGGCCCAATTTGTCTCTTGTTACAGAAACTGTTTTGTAGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | TTAAGCGCACTGACTACTCCTCCAAAGGTTCTGAGTTCAAATCTCAGCAACCACACATCTTTCCCTCCTTaGTTTTGTGTGCTCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSALTTPPKVLSSNLSNHTSFPP*FCVLFF Trigger: AAAGAAGAGCACACAAAAGCAAGGAGGGAAAGATGT...GTGGTTGCTGAGATTTGAACTCAGAACCTTTGGAGGAGTAGTCAGTGCGCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATTCCATTCTCTTTTCCTaGTCCTTTTTCCTGATCTCG | + |
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Preference number: 4 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNSILFS*SFFLIS Trigger: CGAGATCAGGAAAAAGGAGCAGGAAAAGAGAATGGA...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTCTCATTGCTCCGTTTTaGAAACTTGCTCACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSLIAPF*KLAHSL Trigger: GAGGCTGTGAGCAAGTTTGCAAAACGGAGCAATGAG...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR GCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTCACAGTGGAGTCTTCTaGAAGAGCTTTCTGAATCTC | + |
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Preference number: 4 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSHSGVF*KSFLNL Trigger: GAGATTCAGAAAGCTCTTGCAGAAGACTCCACTGTG...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTAGTTGTGAATATATTTaGGCTTCCGATCCTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSSCEYI*ASDPSP Trigger: CGGGGAAGGATCGGAAGCCCAAATATATTCACAACT...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR TCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTTCTGCAAGAGCTTTCTaGATCTCCAATTTGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSSARAF*ISNLVC Trigger: ACAGACCAAATTGGAGATTCAGAAAGCTCTTGCAGA...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR TCA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTGCTTTTAGTAAGTTGTaGATATATTTGGGCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSAFSKL*IYLGFR Trigger: TCGGAAGCCCAAATATATTCACAACTTACTAAAAGC...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS CCA 90 bp | TCTTGGTCTCTGGACTGCCTGTCCTGGTGCTCATGTCCTCTTGACTaGGAACCTCGTGAGTGGTGCTTGGTCCCGAGCCCCCTTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SWSLDCLSWCSCPLD*EPREWCLVPSPLSS Trigger: TGAGGAAAGGGGGCTCGGGACCAAGCACCACTCACGAGGTTCCCAGTCAAGAGGACATGAGCACCAGGACAGGCAGTCCAGAGACCAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | ACAACAACCAAAATCTCCTCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCTCAGGGGGCCTCTCTaGCTCACTGCCCTTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TTTKISSEPERWLRALAALRGPL*LTALLW Trigger: CCAGAGAAGGGCAGTGAGCAAGAGAGGCCCCCTGAG...GGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGAGGAGATTTTGGTTGTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | TCAGAGCCTGAGAGATGGTTAAGAGCACTGGCTGCCCATACGGAGGACCCAGGTTCTTCTCCTCTGGACTaGACTTTATGGTCTCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: SEPERWLRALAAHTEDPGSSPLD*TLWSRF Trigger: AAAGCGAGACCATAAAGTCAAGTCCAGAGGAGAAGA...ACCTGGGTCCTCCGTATGGGCAGCCAGTGCTCTTAACCATCTCTCAGGCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS TCA 90 bp | GCTGTGGTGGTCTGCTCTCTGAATTGGTTTCATCAGGGTAACCCCTaGGCTTCTCTTCTTTTATCACAGTCCTGGCTTCACGAAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: AVVVCSLNWFHQGNP*ASLLLSQSWLHESW Trigger: CCAGCTTTCGTGAAGCCAGGACTGTGATAAAAGAAGAGAAGCTCAGGGGTTACCCTGATGAAACCAATTCAGAGAGCAGACCACCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | GGATCACTTGAGCACAGGATTTCTAGAACAGCCTGGGCAACAGAGCATAACAACCCTTCTCCGTGTTTCTaGCTTTGCTGGATCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GSLEHRISRTAWATEHNNPSPCF*LCWIFP Trigger: AGGAAAGATCCAGCAAAGCAAGAAACACGGAGAAGG...GTTGTTATGCTCTGTTGCCCAGGCTGTTCTAGAAATCCTGTGCTCAAGTGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATATGAGAGGGCTTCCCTaGTTCCCCTTTGTCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNMRGLP*FPFVLL Trigger: GAGAAGGACAAAGGGGAACAAGGGAAGCCCTCTCAT...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATTCTCAATATAAGTCTTaGCGTTTATCCGCGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNSQYKS*RLSAPS Trigger: AGATGGCGCGGATAAACGCAAAGACTTATATTGAGA...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGCCCTCTTCTGCAGTGTCTGAAGACAGCTACAGTTTACTTACACATAATCTTCAGTTTATCTTCTaGCTCATGCTTCTTCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LKPSSAVSEDSYSLLTHNLQFIF*LMLLPV Trigger: TACTGGAAGAAGCATGAGCAAGAAGATAAACTGAAG...ATTATGTGTAAGTAAACTGTAGCTGTCTTCAGACACTGCAGAAGAGGGCTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTTTCCCTTGTTCCCCTTaGTCCTTCTCCGTGTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSFPCSP*SFSVFL Trigger: AAGAAACACGGAGAAGGACAAAGGGGAACAAGGGAA...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTGTCGTGATCATTCCGTaGTCTATCTCTTTCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSVVIIP*SISFLF Trigger: GAACAAGAAAGAGATAGACAACGGAATGATCACGAC...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS-3UTR CAA 90 bp | GTTTTATTTGAACATAGAGATAGTTTTAACAAGCTTCAGTCTCCTTGCTGGAGTATCACAGTTTCCTCATaGCTCCGTTTTGCAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: VLFEHRDSFNKLQSPCWSITVSS*LRFANL Trigger: CAAGTTTGCAAAACGGAGCAATGAGGAAACTGTGAT...ACTCCAGCAAGGAGACTGAAGCTTGTTAAAACTATCTCTATGTTCAAATAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS GCA 72 bp | CTCACGGTCAGCATCTGGGTTTTCCTCCGCTTCCTGTaGACCCCTTTGCAGGACGCAGCTCTGCTGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LTVSIWVFLRFL*TPLQDAALLWW Trigger: CCACCACAGCAGAGCTGCGTCCTGCAAAGGGGTGCACAGGAAGCGGAGGAAAACCCAGATGCTGACCGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS GCA 72 bp | GCATCTGGGTTTTCCTCCGCTTCCTGTGCACCCCTTTaGAGGACGCAGCTCTGCTGTGGTGGTCTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ASGFSSASCAPL*RTQLCCGGLLS Trigger: AGAGAGCAGACCACCACAGCAGAGCTGCGTCCTGCAAAGGGGTGCACAGGAAGCGGAGGAAAACCCAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS CAA 90 bp | AGCTCTCTTGGTCTCTGGACTGCCTGTCCTGGTGCTCATGTCCTCTaGACTGGGAACCTCGTGAGTGGTGCTTGGTCCCGAGCCCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSLGLWTACPGAHVL*TGNLVSGAWSRAPF Trigger: AAAGGGGGCTCGGGACCAAGCACCACTCACGAGGTTCCCAGTCAAGAGGACATGAGCACCAGGACAGGCAGTCCAGAGACCAAGAGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS GCA 72 bp | TCCGCTTCCTGTGCACCCCTTTGCAGGACGCAGCTCTaGTGTGGTGGTCTGCTCTCTGAATTGGTTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SASCAPLCRTQL*CGGLLSELVSS Trigger: TGATGAAACCAATTCAGAGAGCAGACCACCACAGCAGAGCTGCGTCCTGCAAAGGGGTGCACAGGAAGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS TCA 72 bp | TTGCAGGACGCAGCTCTGCTGTGGTGGTCTGCTCTCTaGATTGGTTTCATCAGGGTAACCCCTGAGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LQDAALLWWSAL*IGFIRVTPELL Trigger: GAGAAGCTCAGGGGTTACCCTGATGAAACCAATTCAGAGAGCAGACCACCACAGCAGAGCTGCGTCCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS TCA 72 bp | TCCTCACTAGATGATCTTGAGTGGGCGCGATTCTTGTaGTGCTTGGGGTGTTTCATGGAGGCGCCGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSLDDLEWARFL*CLGCFMEAPVS Trigger: AGACACCGGCGCCTCCATGAAACACCCCAAGCATCACAAGAATCGCGCCCACTCAAGATCATCTAGTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS CAA 72 bp | TCATGTCCTCTTGACTGGGAACCTCGTGAGTGGTGCTaGGTCCCGAGCCCCCTTTCCTCACTAGATGATCTT | + |
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Preference number: 6 (lower is better) Translates to: SCPLDWEPREWC*VPSPLSSLDDL Trigger: AAGATCATCTAGTGAGGAAAGGGGGCTCGGGACCAAGCACCACTCACGAGGTTCCCAGTCAAGAGGACATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS TCA 72 bp | TCCTTCTCCGTGTTTCTTGCTTTGCTGGATCTTTCCTaGTCAAGGTCGTCCTTTGGTCTAGACCGTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SFSVFLALLDLS*SRSSFGLDRGL Trigger: CAGCCCACGGTCTAGACCAAAGGACGACCTTGATCAGGAAAGATCCAGCAAAGCAAGAAACACGGAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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| CDS TCA 72 bp | GTCTGCTCTCTGAATTGGTTTCATCAGGGTAACCCCTaGGCTTCTCTTCTTTTATCACAGTCCTGGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: VCSLNWFHQGNP*ASLLLSQSWLH Trigger: GTGAAGCCAGGACTGTGATAAAAGAAGAGAAGCTCAGGGGTTACCCTGATGAAACCAATTCAGAGAGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102494.8 |
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