Pregenerated sensors for NSMCE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070520Ensembl transcript IDs: ENSMUST00000094331.5
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACAGACAAGCGCAGCCCTCCCCCGCATCAAAGCAGCTCCTTCCTaGAGTGGATGGAGACTATCACCAAAGTCTTCACCGGCTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: PQTSAALPRIKAAPS*SGWRLSPKSSPAQR Trigger: TCTCTGAGCCGGTGAAGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGGCTGCGCTTGTCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | CTCGTAGCTACCACAGACTCCTCTAGTTGGCCTCTAGTTCAGGGCTaGTTAAAGTCACCTGTCCTCACTGCCACCCTGTTTGTTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LVATTDSSSWPLVQG*LKSPVLTATLFVLL Trigger: CAGAAGAACAAACAGGGTGGCAGTGAGGACAGGTGACTTTAATCAGCCCTGAACTAGAGGCCAACTAGAGGAGTCTGTGGTAGCTACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | GTGGTAGCCTTGTTCACACTGGTCTGTCCGCACCAGACATCACCCTaGGTTCTTCTAAAGAACTATTCTTCCACACCAGGGCTTTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: VVALFTLVCPHQTSP*VLLKNYSSTPGLCS Trigger: TGAGCAAAGCCCTGGTGTGGAAGAATAGTTCTTTAGAAGAACTCAGGGTGATGTCTGGTGCGGACAGACCAGTGTGAACAAGGCTACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 90 bp | AAGGGCACACTTGATTCTACAGATACACAAGCTAAATTCTTCTGGTaGAACAGGATCTGCACTTGGGCAGTGTGGTTCCCAATCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: KGTLDSTDTQAKFFW*NRICTWAVWFPIRP Trigger: AGGCCTGATTGGGAACCACACTGCCCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGCTTGTGTATCTGTAGAATCAAGTGTGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 90 bp | AATGTGTGCAAGCAATGCCAGCTGTGGGAAACGGCTTTGAGTTGTTaGTCAAAGGAGTCAGAGACTCCCCAAATAACAGGCTACTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: NVCKQCQLWETALSC*SKESETPQITGYCH Trigger: ATGACAGTAGCCTGTTATTTGGGGAGTCTCTGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACAGCTGGCATTGCTTGCACACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 90 bp | CTTAAGGGCACACTTGATTCTACAGATACACAAGCTAAATTCTTCTaGTGGAACAGGATCTGCACTTGGGCAGTGTGGTTCCCAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: LKGTLDSTDTQAKFF*WNRICTWAVWFPIR Trigger: CCTGATTGGGAACCACACTGCCCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGCTTGTGTATCTGTAGAATCAAGTGTGCCCTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | GCCAGATACTATGAAGAACTCCAAGGAATCTGTGAACTTGTTTCCTaGCTCACCTATAGCAACATAAAGTGCCCCTCATCTTGTGGTAGC | + |
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Preference number: 1 (lower is better) Translates to: ARYYEELQGICELVS*LTYSNIKCPSSCGS Trigger: GCTACCACAAGATGAGGGGCACTTTATGTTGCTATAGGTGAGTCAGGAAACAAGTTCACAGATTCCTTGGAGTTCTTCATAGTATCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | TACTTTATTTCCAGCCTCCAGGATTCCTCAGTGATGGACTACAACTaGAATAAAACCCTTACCTTCCAAGCTGCCTGTGGTCATGGTATG | + |
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Preference number: 1 (lower is better) Translates to: YFISSLQDSSVMDYN*NKTLTFQAACGHGM Trigger: CATACCATGACCACAGGCAGCTTGGAAGGTAAGGGTTTTATTTCAGTTGTAGTCCATCACTGAGGAATCCTGGAGGCTGGAAATAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | TCCTTCATAGCCTCTACTTTATTTCCAGCCTCCAGGATTCCTCAGTaGTGGACTACAACTGAAATAAAACCCTTACCTTCCAAGCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: SFIASTLFPASRIPQ*WTTTEIKPLPSKLP Trigger: AGGCAGCTTGGAAGGTAAGGGTTTTATTTCAGTTGTAGTCCATCACTGAGGAATCCTGGAGGCTGGAAATAAAGTAGAGGCTATGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR GCA 90 bp | CTAGAAGCCTTCTCCCTGAGGACTAGCTTTCATAGTACCCAGAGATaGTGTGAAAACAGCCAAGAGAGAAAAGCAGTTAATAATGGCATC | + |
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Preference number: 1 (lower is better) Translates to: LEAFSLRTSFHSTQR*CENSQERKAVNNGI Trigger: GATGCCATTATTAACTGCTTTTCTCTCTTGGCTGTTTTCACAGCATCTCTGGGTACTATGAAAGCTAGTCCTCAGGGAGAAGGCTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | AGAGACTCCCCAAATAACAGGCTACTGTCATTGCTCTTGGTCACTTaGATTAGATTTGAACTAGAAGCCTTCTCCCTGAGGACTAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: RDSPNNRLLSLLLVT*IRFELEAFSLRTSF Trigger: AAAGCTAGTCCTCAGGGAGAAGGCTTCTAGTTCAAATCTAATTCAAGTGACCAAGAGCAATGACAGTAGCCTGTTATTTGGGGAGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | CAACTTGACATAAACTGGGGTCATCTGGAAAGAAAGACCCTCAATTaGGAACATGCTTCCACCAGGTGGAACACTTTCTTGATCGATTTT | + |
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Preference number: 1 (lower is better) Translates to: QLDINWGHLERKTLN*EHASTRWNTFLIDF Trigger: AAAATCGATCAAGAAAGTGTTCCACCTGGTGGAAGCATGTTCTCAATTGAGGGTCTTTCTTTCCAGATGACCCCAGTTTATGTCAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR GCA 90 bp | TGTGAAAACAGCCAAGAGAGAAAAGCAGTTAATAATGGCATCCAGTaGAAAGCCTATGAGCATAAACCATTGCAAGATACACCCAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: CENSQERKAVNNGIQ*KAYEHKPLQDTPKG Trigger: ACCCTTGGGTGTATCTTGCAATGGTTTATGCTCATAGGCTTTGCACTGGATGCCATTATTAACTGCTTTTCTCTCTTGGCTGTTTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR GCA 90 bp | TCATGTACATACATACATACATACATACATACATACATACATGCATaGATACATAATGTGTGCAAGCAATGCCAGCTGTGGGAAACGGCT | + |
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Preference number: 1 (lower is better) Translates to: SCTYIHTYIHTYIHA*IHNVCKQCQLWETA Trigger: AGCCGTTTCCCACAGCTGGCATTGCTTGCACACATTATGTATGCATGCATGTATGTATGTATGTATGTATGTATGTATGTATGTACATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 90 bp | AAATATGACAAAACCAAAAACCGCAGATGGTATTTGCAATTGGACTaGTGCACAGAAGATACAAAGAGTTCTCACAAACCAACAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: KYDKTKNRRWYLQLD*CTEDTKSSHKPTNK Trigger: TTTGTTTGTTGGTTTGTGAGAACTCTTTGTATCTTCTGTGCATCAGTCCAATTGCAAATACCATCTGCGGTTTTTGGTTTTGTCATATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAGATCGATTTTTGATGTaGGAGGGCCCAGTTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: PSPASKQLLPAVDGDYHQDRFLM*EGPVHC Trigger: ACAGTGAACTGGGCCCTCCCACATCAAAAATCGATC...TTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAATGTGAACTTGTTTCCTaGCTCACCTATAGCAACATA | + |
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Preference number: 2 (lower is better) Translates to: PSPASKQLLPAVDGDYHQCELVS*LTYSNI Trigger: TATGTTGCTATAGGTGAGTCAGGAAACAAGTTCACA...TTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR GCA 90 bp | CCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTATCCTAGGACACTACTaGAACACAAGCCAACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: PRIKAAPSCSGWRLSPKSILGHY*NTSQQS Trigger: TGACTGTTGGCTTGTGTTGCAGTAGTGTCCTAGGAT...AGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CAA 90 bp | TCACCTGTCCTCACTGCCACCCTGTTTGTTCTTCTGATGACGAACTaGCAACTCTTCTCAGAACAACAGTACTTACTGCCTGTGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SPVLTATLFVLLMTN*QLFSEQQYLLPVPS Trigger: ACTGGGCACAGGCAGTAAGTACTGTTGTTCTGAGAAGAGTTGCAAGTTCGTCATCAGAAGAACAAACAGGGTGGCAGTGAGGACAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTTCACCGGGCTAAATTCTTCTGGTaGAACAGGATCTGCACTTGG | + |
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Preference number: 2 (lower is better) Translates to: SKQLLPAVDGDYHQSLHRAKFFW*NRICTW Trigger: CCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGC...CCGGTGAAGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTCAAGCTAAATTCTTCTaGTGGAACAGGATCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: PRIKAAPSCSGWRLSPKSQAKFF*WNRICT Trigger: AGTGCAGATCCTGTTCCACCAGAAGAATTTAGCTTG...AGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CAA 90 bp | TGCATACATAATGTGTGCAAGCAATGCCAGCTGTGGGAAACGGCTTaGAGTTGTTGGTCAAAGGAGTCAGAGACTCCCCAAATAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: CIHNVCKQCQLWETA*SCWSKESETPQITG Trigger: GCCTGTTATTTGGGGAGTCTCTGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACAGCTGGCATTGCTTGCACACATTATGTATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTTCACCGGGTGATGGACTACAACTaGAATAAAACCCTTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: SKQLLPAVDGDYHQSLHRVMDYN*NKTLTF Trigger: GAAGGTAAGGGTTTTATTTCAGTTGTAGTCCATCAC...CCGGTGAAGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGAGATTGTGTCCTTTACAGATGACAGAGAAGCTGAACCTACATAATCTTTCTGGCTTGAACTCCTaGGGCACACACCTCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: AVRLCPLQMTEKLNLHNLSGLNS*GTHLPD Trigger: ATCAGGGAGGTGTGTGCCTCAGGAGTTCAAGCCAGA...AAGATTATGTAGGTTCAGCTTCTCTGTCATCTGTAAAGGACACAATCTCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTCATGATATGCAGTTCTaGAACCTGTCAAGAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: PRIKAAPSCSGWRLSPKSHDMQF*NLSRKI Trigger: TATCTTTCTTGACAGGTTCCAGAACTGCATATCATG...AGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTTCACCGGCAAAGTGTTCCTTCTTaGATATGTTTGGCATCATAC | + |
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Preference number: 2 (lower is better) Translates to: SKQLLPAVDGDYHQSLHRQSVPS*ICLASY Trigger: GTATGATGCCAAACATATTCAAGAAGGAACACTTTG...CCGGTGAAGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTCATCTGGAAAGAAAGACCCTCAATTGAGAACATGCTTCCACCAGGTGGAACACCAGACATCACCCTaGGTTCTTCTAAAGAACTAT | + |
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Preference number: 2 (lower is better) Translates to: GSSGKKDPQLRTCFHQVEHQTSP*VLLKNY Trigger: ATAGTTCTTTAGAAGAACTCAGGGTGATGTCTGGTG...TTCCACCTGGTGGAAGCATGTTCTCAATTGAGGGTCTTTCTTTCCAGATGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTTCACCGGTATTTGCAATTGGACTaGTGCACAGAAGATACAAAG | + |
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Preference number: 2 (lower is better) Translates to: SKQLLPAVDGDYHQSLHRYLQLD*CTEDTK Trigger: CTTTGTATCTTCTGTGCATCAGTCCAATTGCAAATA...CCGGTGAAGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGAGATTGTGTCCTTTACAGATGACAGAGAAGCTGAACCTACATAATCTTTGGTGGAACAGGATCTaGACTTGGGCAGTGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: AVRLCPLQMTEKLNLHNLWWNRI*TWAVWF Trigger: GAACCACACTGCCCAAGTGCAGATCCTGTTCCACCA...AAGATTATGTAGGTTCAGCTTCTCTGTCATCTGTAAAGGACACAATCTCACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CAA 90 bp | GCAACTCTTCTCAGAACAACAGTACTTACTGCCTGTGCCCAGTGTTaGGCCAGATACTATGAAGAACTCCAAGGAATCTGTGAACTTGTT | + |
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Preference number: 2 (lower is better) Translates to: ATLLRTTVLTACAQC*ARYYEELQGICELV Trigger: AACAAGTTCACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACACTGGGCACAGGCAGTAAGTACTGTTGTTCTGAGAAGAGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCAGTGTTTGGCCAGATACTATGAAGAACTCCAAGGAATCTGTGAACTTCCTGTTCTTTTATACTaGATCTCCAGAGTCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CAQCLARYYEELQGICELPVLLY*ISRVPQ Trigger: CTGAGGGACTCTGGAGATCCAGTATAAAAGAACAGG...AAGTTCACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACACTGGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CAA 90 bp | GTTTATCTAGCCTCTAATGTAGCACAGCATCTCCAACAAAATAGCTaGACAGTAAACTGTGAAGCCCTCGGAAAACCGGGATACCATTAC | + |
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Preference number: 2 (lower is better) Translates to: VYLASNVAQHLQQNS*TVNCEALGKPGYHY Trigger: GTAATGGTATCCCGGTTTTCCGAGGGCTTCACAGTTTACTGTCAAGCTATTTTGTTGGAGATGCTGTGCTACATTAGAGGCTAGATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CAA 90 bp | GCTCAGCTTTATCTCGTTTCCTATTTATTCACCTTAAGGGCACACTaGATTCTACAGATACACAAGCTAAATTCTTCTGGTGGAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: AQLYLVSYLFTLRAH*ILQIHKLNSSGGTG Trigger: TCCTGTTCCACCAGAAGAATTTAGCTTGTGTATCTGTAGAATCAAGTGTGCCCTTAAGGTGAATAAATAGGAAACGAGATAAAGCTGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR GCA 72 bp | AGCGCAGCCCTCCCCCGCATCAAAGCAGCTCCTTCCTaGAGTGGATGGAGACTATCACCAAAGTCTTCACCG | + |
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Preference number: 3 (lower is better) Translates to: SAALPRIKAAPS*SGWRLSPKSSP Trigger: CGGTGAAGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGGCTGCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 72 bp | GTGGGTCCCAGGGATCCACCTAAGGTTCTCAGGCCCTaGTGGCAACTGAGGTTCTTTACCCACTGCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VGPRDPPKVLRP*WQLRFFTHCSV Trigger: GACAGAGCAGTGGGTAAAGAACCTCAGTTGCCACCAGGGCCTGAGAACCTTAGGTGGATCCCTGGGACCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 72 bp | ACGATGCACCCACATCCACCACAGGGCTGTAAAAGCTaGGTGTTCACATGGGTTGCAGAGCGTGGGGCGACT | + |
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Preference number: 3 (lower is better) Translates to: TMHPHPPQGCKS*VFTWVAERGAT Trigger: AGTCGCCCCACGCTCTGCAACCCATGTGAACACTCAGCTTTTACAGCCCTGTGGTGGATGTGGGTGCATCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR GCA 72 bp | ACCGGCTCAGAGAGCAGAGAACAGCTAACCACTGGGTaGTCAACACAACCACCACACCCAAGGCTCGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: TGSESREQLTTG*STQPPHPRLGS Trigger: ACTTCCGAGCCTTGGGTGTGGTGGTTGTGTTGAGCACCCAGTGGTTAGCTGTTCTCTGCTCTCTGAGCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 72 bp | GGTCCCAGGGATCCACCTAAGGTTCTCAGGCCCTGGTaGCAACTGAGGTTCTTTACCCACTGCTCTGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: GPRDPPKVLRPW*QLRFFTHCSVS Trigger: TGAGACAGAGCAGTGGGTAAAGAACCTCAGTTGCCACCAGGGCCTGAGAACCTTAGGTGGATCCCTGGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAGCCTGTGCCCAGTGTTaGGCCAGATACTATGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: PSPASKQLLPAVDGDYHQACAQC*ARYYEE Trigger: TTCTTCATAGTATCTGGCCAAACACTGGGCACAGGC...TTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 72 bp | GTGCTCAACACAACCACCACACCCAAGGCTCGGAAGTaGCATAGAAGACGGGGCAGGAAGGTTATAAGAACC | + |
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Preference number: 3 (lower is better) Translates to: VLNTTTTPKARK*HRRRGRKVIRT Trigger: GGTTCTTATAACCTTCCTGCCCCGTCTTCTATGCCACTTCCGAGCCTTGGGTGTGGTGGTTGTGTTGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 72 bp | CTTGGTACTAAGACTCACCTGTGGCTGGGGAGGTCATaGACCCTAGAGAAGAACCTACTCCTGCCACTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LGTKTHLWLGRS*TLEKNLLLPLP Trigger: AGGAAGTGGCAGGAGTAGGTTCTTCTCTAGGGTTCATGACCTCCCCAGCCACAGGTGAGTCTTAGTACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR GCA 72 bp | AACCCTGCAACACATCCTAACGCTCCAAGGCCTTTATaGGTAGCAGAATCAAGCTTCCTCCGACCCCCATTC | + |
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Preference number: 3 (lower is better) Translates to: NPATHPNAPRPL*VAESSFLRPPF Trigger: GAATGGGGGTCGGAGGAAGCTTGATTCTGCTACGCATAAAGGCCTTGGAGCGTTAGGATGTGTTGCAGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAAGAAAGACCCTCAATaGAGAACATGCTTCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: PSPASKQLLPAVDGDYHQKKDPQ*RTCFHQ Trigger: CTGGTGGAAGCATGTTCTCAATTGAGGGTCTTTCTT...TTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAACTCCAACAAAATAGCTaGACAGTAAACTGTGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: PSPASKQLLPAVDGDYHQLQQNS*TVNCEA Trigger: GGCTTCACAGTTTACTGTCAAGCTATTTTGTTGGAG...TTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR TCA 72 bp | ACCACAGACTCCTCTAGTTGGCCTCTAGTTCAGGGCTaGTTAAAGTCACCTGTCCTCACTGCCACCCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: TTDSSSWPLVQG*LKSPVLTATLF Trigger: AAACAGGGTGGCAGTGAGGACAGGTGACTTTAATCAGCCCTGAACTAGAGGCCAACTAGAGGAGTCTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 72 bp | CCTTCCAAGCTGCCTGTGGTCATGGTATGTCACAGCTaGAGAAAGCATCCTAGGACACTACTGCAACACAAG | + |
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Preference number: 3 (lower is better) Translates to: PSKLPVVMVCHS*RKHPRTLLQHK Trigger: CTTGTGTTGCAGTAGTGTCCTAGGATGCTTTCTCCAGCTGTGACATACCATGACCACAGGCAGCTTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR CCA 72 bp | ACAGCTTCTAGGAGTCAACTTTTTCTTTCTGCAGTGTaGGTCCCAGGGATCCACCTAAGGTTCTCAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: TASRSQLFLSAV*VPGIHLRFSGP Trigger: AGGGCCTGAGAACCTTAGGTGGATCCCTGGGACCCACACTGCAGAAAGAAAAAGTTGACTCCTAGAAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAAGGAATCTGTGAACTaGTTTCCTGACTCACCTATA | + |
|
Preference number: 3 (lower is better) Translates to: PSPASKQLLPAVDGDYHQKESVN*FPDSPI Trigger: TATAGGTGAGTCAGGAAACAAGTTCACAGATTCCTT...TTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | ATGCTTAATGTCACCTCAGGAGAGCAGATGGCACAGTaGAGTATTAACGATGCACCCACATCCACCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MLNVTSGEQMAQ*SINDAPTSTTG Trigger: CCCTGTGGTGGATGTGGGTGCATCGTTAATACTTCACTGTGCCATCTGCTCTCCTGAGGTGACATTAAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | GATACACAAGCTAAATTCTTCTGGTGGAACAGGATCTaGACTTGGGCAGTGTGGTTCCCAATCAGGCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: DTQAKFFWWNRI*TWAVWFPIRPG Trigger: ACCAGGCCTGATTGGGAACCACACTGCCCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGCTTGTGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CCA 72 bp | AAGCAATGCCAGCTGTGGGAAACGGCTTTGAGTTGTTaGTCAAAGGAGTCAGAGACTCCCCAAATAACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQCQLWETALSC*SKESETPQITG Trigger: GCCTGTTATTTGGGGAGTCTCTGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACAGCTGGCATTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTCTTCTGATGACGAACTaGCAACTCTTCTCAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PRIKAAPSCSGWRLSPKSLLMTN*QLFSEQ Trigger: TTGTTCTGAGAAGAGTTGCAAGTTCGTCATCAGAAG...AGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | TTGTTCACACTGGTCTGTCCGCACCAGACATCACCCTaGGTTCTTCTAAAGAACTATTCTTCCACACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFTLVCPHQTSP*VLLKNYSSTPG Trigger: CCCTGGTGTGGAAGAATAGTTCTTTAGAAGAACTCAGGGTGATGTCTGGTGCGGACAGACCAGTGTGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | TCCAGCCTCCAGGATTCCTCAGTGATGGACTACAACTaGAATAAAACCCTTACCTTCCAAGCTGCCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSLQDSSVMDYN*NKTLTFQAACG Trigger: ACCACAGGCAGCTTGGAAGGTAAGGGTTTTATTTCAGTTGTAGTCCATCACTGAGGAATCCTGGAGGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | ATGGCATCCAGTGCAAAGCCTATGAGCATAAACCATTaGAAGATACACCCAAGGGTGCAAGAGTGGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: MASSAKPMSINH*KIHPRVQEWQL Trigger: CAACTGCCACTCTTGCACCCTTGGGTGTATCTTGCAATGGTTTATGCTCATAGGCTTTGCACTGGATGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGTGTTTGGCCAGATACTATGAAGAACTCCAAGGAATCTGTGAACTTGAACAGGATCTGCACTaGGGCAGTGTGGTTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CAQCLARYYEELQGICELEQDLH*GSVVPN Trigger: ATTGGGAACCACACTGCCCAAGTGCAGATCCTGTTC...AAGTTCACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACACTGGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | GCTTCCACCAGGTGGAACACTTTCTTGATCGATTTTTaGTGTGGGAGGGCCCAGTTCACTGTAGATAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: ASTRWNTFLIDF*CGRAQFTVDNA Trigger: AGCATTATCTACAGTGAACTGGGCCCTCCCACATCAAAAATCGATCAAGAAAGTGTTCCACCTGGTGGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | ATTGAGAACATGCTTCCACCAGGTGGAACACTTTCTTaGTCGATTTTTGATGTGGGAGGGCCCAGTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: IENMLPPGGTLS*SIFDVGGPSSL Trigger: CAGTGAACTGGGCCCTCCCACATCAAAAATCGATCAAGAAAGTGTTCCACCTGGTGGAAGCATGTTCTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | TCTAGTTCAGGGCTGATTAAAGTCACCTGTCCTCACTaGCACCCTGTTTGTTCTTCTGATGACGAACTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSSGLIKVTCPH*HPVCSSDDELA Trigger: TGCAAGTTCGTCATCAGAAGAACAAACAGGGTGGCAGTGAGGACAGGTGACTTTAATCAGCCCTGAACTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | GAAGACTCATTCACTGCGGCTGAGTTTGCAAACTGGTaGAGCCATGATAGGAATCAGTGTGGAAAATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EDSFTAAEFANW*SHDRNQCGKSS Trigger: TGAGGATTTTCCACACTGATTCCTATCATGGCTGCACCAGTTTGCAAACTCAGCCGCAGTGAATGAGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CCA 72 bp | GCATGCATACATAATGTGTGCAAGCAATGCCAGCTGTaGGAAACGGCTTTGAGTTGTTGGTCAAAGGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ACIHNVCKQCQL*ETALSCWSKES Trigger: TGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACAGCTGGCATTGCTTGCACACATTATGTATGCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CCA 72 bp | AAGGAAGACTCATTCACTGCGGCTGAGTTTGCAAACTaGTGCAGCCATGATAGGAATCAGTGTGGAAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: KEDSFTAAEFAN*CSHDRNQCGKS Trigger: GGATTTTCCACACTGATTCCTATCATGGCTGCACCAGTTTGCAAACTCAGCCGCAGTGAATGAGTCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | GCCTCTACTTTATTTCCAGCCTCCAGGATTCCTCAGTaGTGGACTACAACTGAAATAAAACCCTTACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASTLFPASRIPQ*WTTTEIKPLPS Trigger: GGAAGGTAAGGGTTTTATTTCAGTTGTAGTCCATCACTGAGGAATCCTGGAGGCTGGAAATAAAGTAGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | GAGGGAGAGGAAGGGATAAAGAACACTGAGGATGTTTaGAAAGGTCACGGGGAAACATACTATGCACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: EGEEGIKNTEDV*KGHGETYYALH Trigger: ATGAAGTGCATAGTATGTTTCCCCGTGACCTTTTCAAACATCCTCAGTGTTCTTTATCCCTTCCTCTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | GGGTCATCTGGAAAGAAAGACCCTCAATTGAGAACATaGTTCCACCAGGTGGAACACTTTCTTGATCGATTT | + |
|
Preference number: 3 (lower is better) Translates to: GSSGKKDPQLRT*FHQVEHFLDRF Trigger: AAATCGATCAAGAAAGTGTTCCACCTGGTGGAAGCATGTTCTCAATTGAGGGTCTTTCTTTCCAGATGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACAAGCTAAATTCTTCTGGTGGAACAGGATCTGCACTTGGGCAGTGTGGTTCCCAAAGTGTTCCTTCTaGAATATGTTTGGCATCATA | + |
|
Preference number: 3 (lower is better) Translates to: TQAKFFWWNRICTWAVWFPKCSF*NMFGII Trigger: TATGATGCCAAACATATTCAAGAAGGAACACTTTGG...GAACCACACTGCCCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGCTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGTGTTTGGCCAGATACTATGAAGAACTCCAAGGAATCTGTGAACTTACCTTAAGGGCACACTaGATTCTACAGATACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: CAQCLARYYEELQGICELTLRAH*ILQIHK Trigger: CTTGTGTATCTGTAGAATCAAGTGTGCCCTTAAGGT...AAGTTCACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACACTGGGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | CCAAATAACAGGCTACTGTCATTGCTCTTGGTCACTTaGATTAGATTTGAACTAGAAGCCTTCTCCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PNNRLLSLLLVT*IRFELEAFSLR Trigger: CCTCAGGGAGAAGGCTTCTAGTTCAAATCTAATTCAAGTGACCAAGAGCAATGACAGTAGCCTGTTATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | TTCTCCCTGAGGACTAGCTTTCATAGTACCCAGAGATaGTGTGAAAACAGCCAAGAGAGAAAAGCAGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSLRTSFHSTQR*CENSQERKAVN Trigger: ATTAACTGCTTTTCTCTCTTGGCTGTTTTCACAGCATCTCTGGGTACTATGAAAGCTAGTCCTCAGGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | TATGAAGAACTCCAAGGAATCTGTGAACTTGTTTCCTaGCTCACCTATAGCAACATAAAGTGCCCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: YEELQGICELVS*LTYSNIKCPSS Trigger: AGATGAGGGGCACTTTATGTTGCTATAGGTGAGTCAGGAAACAAGTTCACAGATTCCTTGGAGTTCTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | ATACATACATACATACATGCATGCATACATAATGTGTaGAAGCAATGCCAGCTGTGGGAAACGGCTTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: IHTYIHACIHNV*KQCQLWETALS Trigger: ACTCAAAGCCGTTTCCCACAGCTGGCATTGCTTGCACACATTATGTATGCATGCATGTATGTATGTATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR TCA 72 bp | AAAACCAAAAACCGCAGATGGTATTTGCAATTGGACTaGTGCACAGAAGATACAAAGAGTTCTCACAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: KTKNRRWYLQLD*CTEDTKSSHKP Trigger: TGGTTTGTGAGAACTCTTTGTATCTTCTGTGCATCAGTCCAATTGCAAATACCATCTGCGGTTTTTGGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR GCA 72 bp | GTTCTTCTAAAGAACTATTCTTCCACACCAGGGCTTTaGTCAGCTTTATCTCGTTTCCTATTTATTCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLLKNYSSTPGL*SALSRFLFIHL Trigger: AAGGTGAATAAATAGGAAACGAGATAAAGCTGAGCAAAGCCCTGGTGTGGAAGAATAGTTCTTTAGAAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CCA 72 bp | ATGACAAAACCAAAAACCGCAGATGGTATTTGCAATTaGACTGATGCACAGAAGATACAAAGAGTTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: MTKPKTADGICN*TDAQKIQRVLT Trigger: TGTGAGAACTCTTTGTATCTTCTGTGCATCAGTCCAATTGCAAATACCATCTGCGGTTTTTGGTTTTGTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR GCA 90 bp | CCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAAAGTCTTACCCGAACACGTATTaGAGGCGCTCGGCGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRIKAAPSCSGWRLSPKSYPNTY*RRSAAS Trigger: GCTGGCCGCCGAGCGCCTGCAATACGTGTTCGGGTA...AGACTTTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCCGCATCAAAGCAGCTCCTTCCTGCAGTGGATGGAGACTATCACCAATGCTGGTTTCCAGGTTaGTTCGCGGGCCCCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSPASKQLLPAVDGDYHQCWFPG*FAGPTV Trigger: TACAGTGGGGCCCGCGAACCAACCTGGAAACCAGCA...TTGGTGATAGTCTCCATCCACTGCAGGAAGGAGCTGCTTTGATGCGGGGGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR TCA 90 bp | GAACTATTCTTCCACACCAGGGCTTTGCTCAGCTTTATCTCGTTTCCTATTTATAGCTCCAGCTGCTTCTaGGTGCGCGGCCCCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELFFHTRALLSFISFPIYSSSCF*VRGPTV Trigger: GACCGTGGGGCCGCGCACTCAGAAGCAGCTGGAGCT...ATAAATAGGAAACGAGATAAAGCTGAGCAAAGCCCTGGTGTGGAAGAATAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCATCTGGAAAGAAAGACCCTCAATTGAGAACATGCTTCCACCAGGTGGAATGTAGCTGTGGCTCTTaGGCTCCAGCTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSGKKDPQLRTCFHQVECSCGS*APAPPA Trigger: AGCTGGTGGAGCTGGAGCCCAAGAGCCACAGCTACA...TTCCACCTGGTGGAAGCATGTTCTCAATTGAGGGTCTTTCTTTCCAGATGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR GCA 90 bp | ACACAAGCTAAATTCTTCTGGTGGAACAGGATCTGCACTTGGGCAGTGTGGTTCTTGATCAGCAGGAACTaGACCAGCTCGGCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQAKFFWWNRICTWAVWFLISRN*TSSATF Trigger: GAAGGTGGCCGAGCTGGTGCAGTTCCTGCTGATCAA...GAACCACACTGCCCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGCTTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGTGCCCAGTGTTTGGCCAGATACTATGAAGAACTCCAAGGAATCTGTGGTGTGGGCCAGTCTTTaGGGTCCTGGTTATGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LPVPSVWPDTMKNSKESVVWASL*GPGYGL Trigger: AAGTCCATAACCAGGACCCCAAAGACTGGCCCACAC...CACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACACTGGGCACAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | CTGGTGAGGGAGCAAATGGATGGGTTCAGGAGCCATTaGGCAAGTGTCACTGATAACTGTTGGCTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVREQMDGFRSH*ASVTDNCWLLA Trigger: AGCCAGAAGCCAACAGTTATCAGTGACACTTGCCAAATGGCTCCTGAACCCATCCATTTGCTCCCTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR GCA 90 bp | GCTAAATTCTTCTGGTGGAACAGGATCTGCACTTGGGCAGTGTGGTTCCCAATCCCTACTCTCCTCATCTaGCAAAGCCTCGCAGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: AKFFWWNRICTWAVWFPIPTLLI*QSLAVL Trigger: CAATACTGCGAGGCTTTGGCAGATGAGGAGAGTAGG...GATTGGGAACCACACTGCCCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | CAAGCAATGCCAGCTGTGGGAAACGGCTTTGAGTTGTaGGTCAAAGGAGTCAGAGACTCCCCAAATAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAMPAVGNGFEL*VKGVRDSPNNR Trigger: CCTGTTATTTGGGGAGTCTCTGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACAGCTGGCATTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | GTGCAAGCAATGCCAGCTGTGGGAAACGGCTTTGAGTaGTTGGTCAAAGGAGTCAGAGACTCCCCAAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQAMPAVGNGFE*LVKGVRDSPNN Trigger: GTTATTTGGGGAGTCTCTGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACAGCTGGCATTGCTTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | AATGTGTGCAAGCAATGCCAGCTGTGGGAAACGGCTTaGAGTTGTTGGTCAAAGGAGTCAGAGACTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NVCKQCQLWETA*SCWSKESETPQ Trigger: TTGGGGAGTCTCTGACTCCTTTGACCAACAACTCAAAGCCGTTTCCCACAGCTGGCATTGCTTGCACACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR TCA 90 bp | GGACCACAAGTGCTCACACCCAACAGAATATGTATATTTAAAGCTGTGTTGACAGGATGTCCGTCCGCTTaGTCGGGATCTTCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPQVLTPNRICIFKAVLTGCPSA*SGSSSG Trigger: ACCAGAAGAAGATCCCGATCAAGCGGACGGACATCC...TGTCAACACAGCTTTAAATATACATATTCTGTTGGGTGTGAGCACTTGTGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | GATACACCCAAGGGTGCAAGAGTGGCAGTTGCCATCTaGGGGGTAACTAAGAGTTGTCTAGTTGAATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTPKGARVAVAI*GVTKSCLVECK Trigger: CTTACATTCAACTAGACAACTCTTAGTTACCCCCAAGATGGCAACTGCCACTCTTGCACCCTTGGGTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | CTCAGAACAACAGTACTTACTGCCTGTGCCCAGTGTTaGGCCAGATACTATGAAGAACTCCAAGGAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRTTVLTACAQC*ARYYEELQGIC Trigger: ACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACACTGGGCACAGGCAGTAAGTACTGTTGTTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR CCA 90 bp | GGACCACAAGTGCTCACACCCAACAGAATATGTATATTTAAAGCTGTGTTGACACAGTCTTTGGGGTCCTaGTTATGGACTTTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GPQVLTPNRICIFKAVLTQSLGS*LWTLAT Trigger: TGTGGCCAAAGTCCATAACCAGGACCCCAAAGACTG...TGTCAACACAGCTTTAAATATACATATTCTGTTGGGTGTGAGCACTTGTGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | CATAAACTGGGGTCATCTGGAAAGAAAGACCCTCAATaGAGAACATGCTTCCACCAGGTGGAACACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKLGSSGKKDPQ*RTCFHQVEHFL Trigger: AAGAAAGTGTTCCACCTGGTGGAAGCATGTTCTCAATTGAGGGTCTTTCTTTCCAGATGACCCCAGTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | TATAAGAACCAGAGAACCGGGATGTCTGCTGTGAGATaGTGTCCTTTACAGATGACAGAGAAGCTGAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: YKNQRTGMSAVR*CPLQMTEKLNL Trigger: TAGGTTCAGCTTCTCTGTCATCTGTAAAGGACACAATCTCACAGCAGACATCCCGGTTCTCTGGTTCTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | AGTTCTTCTAAAGAACTATTCTTCCACACCAGGGCTTaGCTCAGCTTTATCTCGTTTCCTATTTATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSKELFFHTRA*LSFISFPIYSP Trigger: AGGTGAATAAATAGGAAACGAGATAAAGCTGAGCAAAGCCCTGGTGTGGAAGAATAGTTCTTTAGAAGAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| 3UTR CAA 72 bp | TATCTCGTTTCCTATTTATTCACCTTAAGGGCACACTaGATTCTACAGATACACAAGCTAAATTCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLVSYLFTLRAH*ILQIHKLNSSG Trigger: ACCAGAAGAATTTAGCTTGTGTATCTGTAGAATCAAGTGTGCCCTTAAGGTGAATAAATAGGAAACGAGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS CCA 90 bp | AAGCGCGGGAGCCCTGGGAGGAGCCGCCCGCGGCGCGGGACGTGCTaGGTCCTTCCTCGCCAGCGCCTCCCCAGTCCCGCTCCGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KRGSPGRSRPRRGTC*VLPRQRLPSPAPGQ Trigger: CTGACCCGGAGCGGGACTGGGGAGGCGCTGGCGAGGAAGGACCCAGCACGTCCCGCGCCGCGGGCGGCTCCTCCCAGGGCTCCCGCGCTT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS GCA 90 bp | TGGCTCTTGGGCTCCAGCTCCACCAGCTTGTACCCGAACACGTATTaGAGGCGCTCGGCGGCCAGCTTCAGAAGGTTGGGGTACACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLLGSSSTSLYPNTY*RRSAASFRRLGYTS Trigger: GGACGTGTACCCCAACCTTCTGAAGCTGGCCGCCGAGCGCCTGCAATACGTGTTCGGGTACAAGCTGGTGGAGCTGGAGCCCAAGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS CCA 90 bp | ACCCGAACACGTATTGCAGGCGCTCGGCGGCCAGCTTCAGAAGGTTaGGGTACACGTCCCGGTAGTCGCCCACCACGTGCTTCAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TRTRIAGARRPASEG*GTRPGSRPPRASGC Trigger: ACATCCTGAAGCACGTGGTGGGCGACTACCGGGACGTGTACCCCAACCTTCTGAAGCTGGCCGCCGAGCGCCTGCAATACGTGTTCGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS GCA 90 bp | GGCTGGGGCACTAGCAGTTGCAGGTCTAGCCCTACTCTCCTCATCTaGCAAAGCCTCGCAGTATTGTGTGGGCCAGTCTTTGGGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GWGTSSCRSSPTLLI*QSLAVLCGPVFGVL Trigger: CAGGACCCCAAAGACTGGCCCACACAATACTGCGAGGCTTTGGCAGATGAGGAGAGTAGGGCTAGACCTGCAACTGCTAGTGCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
||
| CDS-3UTR CAA 90 bp | GCTAAATTCTTCTGGTGGAACAGGATCTGCACTTGGGCAGTGTGGTTCCCAATCAGGATGTCCGTCCGCTaGATCGGGATCTTCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AKFFWWNRICTWAVWFPIRMSVR*IGIFFW Trigger: CCAGAAGAAGATCCCGATCAAGCGGACGGACATCCT...GATTGGGAACCACACTGCCCAAGTGCAGATCCTGTTCCACCAGAAGAATTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS-3UTR CAA 90 bp | GGACCACAAGTGCTCACACCCAACAGAATATGTATATTTAAAGCTGTGTTGACAGTACCCGAACACGTATaGCAGGCGCTCGGCGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GPQVLTPNRICIFKAVLTVPEHV*QALGGQ Trigger: CTGGCCGCCGAGCGCCTGCAATACGTGTTCGGGTAC...TGTCAACACAGCTTTAAATATACATATTCTGTTGGGTGTGAGCACTTGTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS-3UTR CAA 90 bp | GGGTCATCTGGAAAGAAAGACCCTCAATTGAGAACATGCTTCCACCAGGTGGAATGTGTGGGCCAGTCTTaGGGGTCCTGGTTATGGACT | + |
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Preference number: 5 (lower is better) Translates to: GSSGKKDPQLRTCFHQVECVGQS*GSWLWT Trigger: AGTCCATAACCAGGACCCCAAAGACTGGCCCACACA...TTCCACCTGGTGGAAGCATGTTCTCAATTGAGGGTCTTTCTTTCCAGATGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS-3UTR CAA 90 bp | CTGCCTGTGCCCAGTGTTTGGCCAGATACTATGAAGAACTCCAAGGAATCTGTGTCCTGGTTATGGACTTaGGCCACAAACTTAAGAACT | + |
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Preference number: 5 (lower is better) Translates to: LPVPSVWPDTMKNSKESVSWLWT*ATNLRT Trigger: AGTTCTTAAGTTTGTGGCCAAAGTCCATAACCAGGA...CACAGATTCCTTGGAGTTCTTCATAGTATCTGGCCAAACACTGGGCACAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS GCA 72 bp | GGGAGCCCTGGGAGGAGCCGCCCGCGGCGCGGGACGTaGTGGGTCCTTCCTCGCCAGCGCCTCCCCAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GSPGRSRPRRGT*WVLPRQRLPSP Trigger: GGGACTGGGGAGGCGCTGGCGAGGAAGGACCCAGCACGTCCCGCGCCGCGGGCGGCTCCTCCCAGGGCTCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS GCA 72 bp | TCGCCAGCGCCTCCCCAGTCCCGCTCCGGGTCAGCCTaGGTGCTGGGCCGACCGCGGCCCCTCGGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPAPPQSRSGSA*VLGRPRPLGFC Trigger: GCAGAAGCCGAGGGGCCGCGGTCGGCCCAGCACGCAGGCTGACCCGGAGCGGGACTGGGGAGGCGCTGGCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS CCA 72 bp | AGCCCTGGGAGGAGCCGCCCGCGGCGCGGGACGTGCTaGGTCCTTCCTCGCCAGCGCCTCCCCAGTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SPGRSRPRRGTC*VLPRQRLPSPA Trigger: AGCGGGACTGGGGAGGCGCTGGCGAGGAAGGACCCAGCACGTCCCGCGCCGCGGGCGGCTCCTCCCAGGGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS GCA 72 bp | CAGCGCCTCCCCAGTCCCGCTCCGGGTCAGCCTGCGTaGTGGGCCGACCGCGGCCCCTCGGCTTCTGCAACA | + |
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Preference number: 6 (lower is better) Translates to: QRLPSPAPGQPA*WADRGPSASAT Trigger: TGTTGCAGAAGCCGAGGGGCCGCGGTCGGCCCAGCACGCAGGCTGACCCGGAGCGGGACTGGGGAGGCGCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS CCA 72 bp | CGTATTGCAGGCGCTCGGCGGCCAGCTTCAGAAGGTTaGGGTACACGTCCCGGTAGTCGCCCACCACGTGCT | + |
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Preference number: 6 (lower is better) Translates to: RIAGARRPASEG*GTRPGSRPPRA Trigger: AGCACGTGGTGGGCGACTACCGGGACGTGTACCCCAACCTTCTGAAGCTGGCCGCCGAGCGCCTGCAATACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS GCA 72 bp | GGCTCCAGCTCCACCAGCTTGTACCCGAACACGTATTaGAGGCGCTCGGCGGCCAGCTTCAGAAGGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GSSSTSLYPNTY*RRSAASFRRLG Trigger: CCCCAACCTTCTGAAGCTGGCCGCCGAGCGCCTGCAATACGTGTTCGGGTACAAGCTGGTGGAGCTGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS CAA 72 bp | GGGCTCCAGCTCCACCAGCTTGTACCCGAACACGTATaGCAGGCGCTCGGCGGCCAGCTTCAGAAGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLQLHQLVPEHV*QALGGQLQKVG Trigger: CCCAACCTTCTGAAGCTGGCCGCCGAGCGCCTGCAATACGTGTTCGGGTACAAGCTGGTGGAGCTGGAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS CAA 90 bp | GTGGCTCTTGGGCTCCAGCTCCACCAGCTTGTACCCGAACACGTATaGCAGGCGCTCGGCGGCCAGCTTCAGAAGGTTGGGGTACACGTC | + |
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Preference number: 6 (lower is better) Translates to: VALGLQLHQLVPEHV*QALGGQLQKVGVHV Trigger: GACGTGTACCCCAACCTTCTGAAGCTGGCCGCCGAGCGCCTGCAATACGTGTTCGGGTACAAGCTGGTGGAGCTGGAGCCCAAGAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS CAA 72 bp | AGCCCTACTCTCCTCATCTGCCAAAGCCTCGCAGTATaGTGTGGGCCAGTCTTTGGGGTCCTGGTTATGGAC | + |
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Preference number: 6 (lower is better) Translates to: SPTLLICQSLAV*CGPVFGVLVMD Trigger: GTCCATAACCAGGACCCCAAAGACTGGCCCACACAATACTGCGAGGCTTTGGCAGATGAGGAGAGTAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS GCA 72 bp | ACTAGCAGTTGCAGGTCTAGCCCTACTCTCCTCATCTaGCAAAGCCTCGCAGTATTGTGTGGGCCAGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TSSCRSSPTLLI*QSLAVLCGPVF Trigger: AAAGACTGGCCCACACAATACTGCGAGGCTTTGGCAGATGAGGAGAGTAGGGCTAGACCTGCAACTGCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS CCA 72 bp | TACTCTCCTCATCTGCCAAAGCCTCGCAGTATTGTGTaGGCCAGTCTTTGGGGTCCTGGTTATGGACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: YSPHLPKPRSIV*ASLWGPGYGLW Trigger: CCAAAGTCCATAACCAGGACCCCAAAGACTGGCCCACACAATACTGCGAGGCTTTGGCAGATGAGGAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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| CDS CAA 72 bp | CGCAGGAAGTCCCAGACCTCAGTCTCGGTGATGGTGTaGCCTTTCATGAAGATAAGCCCCAGGACTATCATA | + |
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Preference number: 6 (lower is better) Translates to: RRKSQTSVSVMV*PFMKISPRTII Trigger: TATGATAGTCCTGGGGCTTATCTTCATGAAAGGCAACACCATCACCGAGACTGAGGTCTGGGACTTCCTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094331.5 |
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