Pregenerated sensors for NSMCE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030750Ensembl transcript IDs: ENSMUST00000033006.14, ENSMUST00000138616.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAAGCGCCGGTGCACATCCGTCATGGCTCCTGCTCTCCTCGTGCTaGCCTGCATGTTGGAGGGAGCGCAAACCAGCGAGATCACGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GSAGAHPSWLLLSSC*PACWRERKPARSRR Trigger: CCGGCGTGATCTCGCTGGTTTGCGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS TCA 90 bp | TCTGCAGACGCCGAACCTCCCACTCCTCCAGCACACCGTGGGTCATaGGCAGCTGGAGGAAGCGCCGGTGCACATCCGTCATGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SADAEPPTPPAHRGS*AAGGSAGAHPSWLL Trigger: CAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATGACCCACGGTGTGCTGGAGGAGTGGGAGGTTCGGCGTCTGCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS GCA 90 bp | GGAGGAAGCGCCGGTGCACATCCGTCATGGCTCCTGCTCTCCTCGTaGTGCCCTGCATGTTGGAGGGAGCGCAAACCAGCGAGATCACGC | + |
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Preference number: 5 (lower is better) Translates to: GGSAGAHPSWLLLSS*CPACWRERKPARSR Trigger: GCGTGATCTCGCTGGTTTGCGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 90 bp | CATGAGCAGCTGGAGGAAGCGCCGGTGCACATCCGTCATGGCTCCTaGTCTCCTCGTGCTGCCCTGCATGTTGGAGGGAGCGCAAACCAG | + |
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Preference number: 5 (lower is better) Translates to: HEQLEEAPVHIRHGS*SPRAALHVGGSANQ Trigger: CTGGTTTGCGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 90 bp | CATGAGCAGCTGGAGGAAGCGCCGGTGCACATCCGTCATGGCTCCTaGTCTCCTCGTGCTGCCCTGCATGTTGGAGGGAGCTTTTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: HEQLEEAPVHIRHGS*SPRAALHVGGSFCG Trigger: CCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS CCA 90 bp | CAGTGGTTCTGCAGACGCCGAACCTCCCACTCCTCCAGCACACCGTaGGTCATGAGCAGCTGGAGGAAGCGCCGGTGCACATCCGTCATG | + |
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Preference number: 5 (lower is better) Translates to: QWFCRRRTSHSSSTP*VMSSWRKRRCTSVM Trigger: CATGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATGACCCACGGTGTGCTGGAGGAGTGGGAGGTTCGGCGTCTGCAGAACCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS GCA 90 bp | CGCCGGTGCACATCCGTCATGGCTCCTGCTCTCCTCGTGCTGCCCTaGATGTTGGAGGGAGCTTTTGCGGGCTTCAATATCTCGTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: RRCTSVMAPALLVLP*MLEGAFAGFNISSA Trigger: CGCTGACGAGATATTGAAGCCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS GCA 90 bp | GGAAGCGCCGGTGCACATCCGTCATGGCTCCTGCTCTCCTCGTGCTaGCCTGCATGTTGGAGGGAGCTTTTGCGGGCTTCAATATCTCGT | + |
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Preference number: 5 (lower is better) Translates to: GSAGAHPSWLLLSSC*PACWRELLRASISR Trigger: ACGAGATATTGAAGCCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS GCA 90 bp | GGAGGAAGCGCCGGTGCACATCCGTCATGGCTCCTGCTCTCCTCGTaGTGCCCTGCATGTTGGAGGGAGCTTTTGCGGGCTTCAATATCT | + |
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Preference number: 5 (lower is better) Translates to: GGSAGAHPSWLLLSS*CPACWRELLRASIS Trigger: AGATATTGAAGCCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS CCA 90 bp | CTGGATGAGGAGGCCGTGGCAGATGTTGCACATCTTCACAGAATCTaGGTAGCTCTCTCGGATGAACTGCTCCATCTCCAAGATAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: LDEEAVADVAHLHRI*VALSDELLHLQDSP Trigger: CGGGCTATCTTGGAGATGGAGCAGTTCATCCGAGAGAGCTACCCAGATTCTGTGAAGATGTGCAACATCTGCCACGGCCTCCTCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS TCA 90 bp | GCCACACAAGGCAAATGCATCCTAATTCCACACGTCTCACAACTTTaGCCCTGGATGAGGAGGCCGTGGCAGATGTTGCACATCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: ATQGKCILIPHVSQL*PWMRRPWQMLHIFT Trigger: TGTGAAGATGTGCAACATCTGCCACGGCCTCCTCATCCAGGGTCAAAGTTGTGAGACGTGTGGAATTAGGATGCATTTGCCTTGTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CCA 90 bp | TTCTGGTATATCGTGGGGCCAGTAGTCATTACAGTGGGGGCAGTGTaGTTCAGGGATGGACTGGAAGTATTTGGCCACACAAGGCAAATG | + |
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Preference number: 5 (lower is better) Translates to: FWYIVGPVVITVGAV*FRDGLEVFGHTRQM Trigger: CATTTGCCTTGTGTGGCCAAATACTTCCAGTCCATCCCTGAACCACACTGCCCCCACTGTAATGACTACTGGCCCCACGATATACCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 72 bp | CGCCAAAGCCCGCGCCGACCCCATGGTCGATCCCGTTaGCCACAGATGCCCGCTCTGGTCCCCGCAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: RQSPRRPHGRSR*PQMPALVPAAP Trigger: GGGTGCTGCGGGGACCAGAGCGGGCATCTGTGGGCAACGGGATCGACCATGGGGTCGGCGCGGGCTTTGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS CAA 72 bp | GCGCCAAAGCCCGCGCCGACCCCATGGTCGATCCCGTaGCCCACAGATGCCCGCTCTGGTCCCCGCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: APKPAPTPWSIP*PTDARSGPRST Trigger: GGTGCTGCGGGGACCAGAGCGGGCATCTGTGGGCAACGGGATCGACCATGGGGTCGGCGCGGGCTTTGGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS TCA 72 bp | GCCGAACCTCCCACTCCTCCAGCACACCGTGGGTCATaGGCAGCTGGAGGAAGCGCCGGTGCACATCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: AEPPTPPAHRGS*AAGGSAGAHPS Trigger: TGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATGACCCACGGTGTGCTGGAGGAGTGGGAGGTTCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS GCA 72 bp | CTGGAGGAAGCGCCGGTGCACATCCGTCATGGCTCCTaGTCTCCTCGTGCTGCCCTGCATGTTGGAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LEEAPVHIRHGS*SPRAALHVGGS Trigger: GCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS CCA 72 bp | TGCAGACGCCGAACCTCCCACTCCTCCAGCACACCGTaGGTCATGAGCAGCTGGAGGAAGCGCCGGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: CRRRTSHSSSTP*VMSSWRKRRCT Trigger: TGTGCACCGGCGCTTCCTCCAGCTGCTCATGACCCACGGTGTGCTGGAGGAGTGGGAGGTTCGGCGTCTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS GCA 72 bp | ACACCGTGGGTCATGAGCAGCTGGAGGAAGCGCCGGTaGACATCCGTCATGGCTCCTGCTCTCCTCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TPWVMSSWRKRR*TSVMAPALLVL Trigger: CAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATGACCCACGGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS CCA 72 bp | AATATCTCGTCAGCGCCAAAGCCCGCGCCGACCCCATaGTCGATCCCGTTGCCCACAGATGCCCGCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: NISSAPKPAPTP*SIPLPTDARSG Trigger: ACCAGAGCGGGCATCTGTGGGCAACGGGATCGACCATGGGGTCGGCGCGGGCTTTGGCGCTGACGAGATATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS GCA 72 bp | ACATCCGTCATGGCTCCTGCTCTCCTCGTGCTGCCCTaGATGTTGGAGGGAGCGCAAACCAGCGAGATCACG | + |
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Preference number: 6 (lower is better) Translates to: TSVMAPALLVLP*MLEGAQTSEIT Trigger: CGTGATCTCGCTGGTTTGCGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 72 bp | GGTGCACATCCGTCATGGCTCCTGCTCTCCTCGTGCTaGCCTGCATGTTGGAGGGAGCTTTTGCGGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GAHPSWLLLSSC*PACWRELLRAS Trigger: TGAAGCCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS GCA 72 bp | TCTCCTCGTGCTGCCCTGCATGTTGGAGGGAGCTTTTaGGGGCTTCAATATCTCGTCAGCGCCAAAGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SPRAALHVGGSF*GLQYLVSAKAR Trigger: GCGGGCTTTGGCGCTGACGAGATATTGAAGCCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS CAA 72 bp | CTCTCCTCGTGCTGCCCTGCATGTTGGAGGGAGCTTTaGCGGGCTTCAATATCTCGTCAGCGCCAAAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LSSCCPACWREL*RASISRQRQSP Trigger: CGGGCTTTGGCGCTGACGAGATATTGAAGCCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS CAA 90 bp | GCCCGGCCATGCAAGGTGAACTCTCCCTCCTTCTCAATCAACCACTaGCTCTGCACAAACTTCTGCAGCACCTGCTCGGCCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ARPCKVNSPSFSINH*LCTNFCSTCSASFF Trigger: GAAGAAGGAGGCCGAGCAGGTGCTGCAGAAGTTTGTGCAGAGCAAGTGGTTGATTGAGAAGGAGGGAGAGTTCACCTTGCATGGCCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 72 bp | ACATCCGTCATGGCTCCTGCTCTCCTCGTGCTGCCCTaGATGTTGGAGGGAGCTTTTGCGGGCTTCAATATC | + |
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Preference number: 6 (lower is better) Translates to: TSVMAPALLVLP*MLEGAFAGFNI Trigger: GATATTGAAGCCCGCAAAAGCTCCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138616.3 |
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| CDS CCA 72 bp | AGTGCTGCCGGGTCCGTAAGGACTTTCTGCTCGACTTaGAGATGCCAGCTTCCCTCTCCTTCTCAGGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SAAGSVRTFCST*RCQLPSPSQGC Trigger: ACAACCCTGAGAAGGAGAGGGAAGCTGGCATCTCCAAGTCGAGCAGAAAGTCCTTACGGACCCGGCAGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 72 bp | GTGAACTCTCCCTCCTTCTCAATCAACCACTTGCTCTaGACAAACTTCTGCAGCACCTGCTCGGCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VNSPSFSINHLL*TNFCSTCSASF Trigger: GAAGGAGGCCGAGCAGGTGCTGCAGAAGTTTGTGCAGAGCAAGTGGTTGATTGAGAAGGAGGGAGAGTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 72 bp | CGGATGAACTGCTCCATCTCCAAGATAGCCCGGCCATaGAAGGTGAACTCTCCCTCCTTCTCAATCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: RMNCSISKIARP*KVNSPSFSINH Trigger: GTGGTTGATTGAGAAGGAGGGAGAGTTCACCTTGCATGGCCGGGCTATCTTGGAGATGGAGCAGTTCATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS TCA 72 bp | GGCAAATGCATCCTAATTCCACACGTCTCACAACTTTaGCCCTGGATGAGGAGGCCGTGGCAGATGTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GKCILIPHVSQL*PWMRRPWQMLH Trigger: GTGCAACATCTGCCACGGCCTCCTCATCCAGGGTCAAAGTTGTGAGACGTGTGGAATTAGGATGCATTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CAA 90 bp | GGCCACACAAGGCAAATGCATCCTAATTCCACACGTCTCACAACTTaGACCCTGGATGAGGAGGCCGTGGCAGATGTTGCACATCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GHTRQMHPNSTRLTT*TLDEEAVADVAHLH Trigger: GTGAAGATGTGCAACATCTGCCACGGCCTCCTCATCCAGGGTCAAAGTTGTGAGACGTGTGGAATTAGGATGCATTTGCCTTGTGTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CAA 72 bp | AGGCAAATGCATCCTAATTCCACACGTCTCACAACTTaGACCCTGGATGAGGAGGCCGTGGCAGATGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: RQMHPNSTRLTT*TLDEEAVADVA Trigger: TGCAACATCTGCCACGGCCTCCTCATCCAGGGTCAAAGTTGTGAGACGTGTGGAATTAGGATGCATTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CAA 72 bp | TGGGGGCAGTGTGGTTCAGGGATGGACTGGAAGTATTaGGCCACACAAGGCAAATGCATCCTAATTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: WGQCGSGMDWKY*ATQGKCILIPH Trigger: GTGTGGAATTAGGATGCATTTGCCTTGTGTGGCCAAATACTTCCAGTCCATCCCTGAACCACACTGCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS GCA 72 bp | TCCTTCTCAATCAACCACTTGCTCTGCACAAACTTCTaGAGCACCTGCTCGGCCTCCTTCTTCCTCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: SFSINHLLCTNF*STCSASFFLIF Trigger: AAAGATGAGGAAGAAGGAGGCCGAGCAGGTGCTGCAGAAGTTTGTGCAGAGCAAGTGGTTGATTGAGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CCA 72 bp | TCATTACAGTGGGGGCAGTGTGGTTCAGGGATGGACTaGAAGTATTTGGCCACACAAGGCAAATGCATCCTA | + |
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Preference number: 6 (lower is better) Translates to: SLQWGQCGSGMD*KYLATQGKCIL Trigger: TAGGATGCATTTGCCTTGTGTGGCCAAATACTTCCAGTCCATCCCTGAACCACACTGCCCCCACTGTAATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CCA 72 bp | AGTAGTCATTACAGTGGGGGCAGTGTGGTTCAGGGATaGACTGGAAGTATTTGGCCACACAAGGCAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: SSHYSGGSVVQG*TGSIWPHKANA Trigger: TGCATTTGCCTTGTGTGGCCAAATACTTCCAGTCCATCCCTGAACCACACTGCCCCCACTGTAATGACTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CAA 90 bp | TCATTACAGTGGGGGCAGTGTGGTTCAGGGATGGACTGGAAGTATTaGGCCACACAAGGCAAATGCATCCTAATTCCACACGTCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: SLQWGQCGSGMDWKY*ATQGKCILIPHVSQ Trigger: TTGTGAGACGTGTGGAATTAGGATGCATTTGCCTTGTGTGGCCAAATACTTCCAGTCCATCCCTGAACCACACTGCCCCCACTGTAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033006.14 |
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| CDS CAA 72 bp | ATCTCAATATACAGAGACTCCAGGACACTGTTGATGTaGTTGATGAAGTCCTCCAGCTTATCTACAGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: ISIYRDSRTLLM*LMKSSSLSTVA Trigger: TGCGACTGTAGATAAGCTGGAGGACTTCATCAACAACATCAACAGTGTCCTGGAGTCTCTGTATATTGAGAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS CAA 90 bp | TTCTTTATCTCAATATACAGAGACTCCAGGACACTGTTGATGTTGTaGATGAAGTCCTCCAGCTTATCTACAGTCGCATTTCGGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: FFISIYRDSRTLLML*MKSSSLSTVAFRSW Trigger: CCATGACCGAAATGCGACTGTAGATAAGCTGGAGGACTTCATCAACAACATCAACAGTGTCCTGGAGTCTCTGTATATTGAGATAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS CAA 72 bp | TCAATATACAGAGACTCCAGGACACTGTTGATGTTGTaGATGAAGTCCTCCAGCTTATCTACAGTCGCATTT | + |
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Preference number: 6 (lower is better) Translates to: SIYRDSRTLLML*MKSSSLSTVAF Trigger: AAATGCGACTGTAGATAAGCTGGAGGACTTCATCAACAACATCAACAGTGTCCTGGAGTCTCTGTATATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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| CDS TCA 72 bp | GTTCAAAATGTTTGTAGAAGAAGCAAAGCCAGTTTCTaGGTCAACGATCAGTTCCAGAGCCTTTCTAAACAG | + |
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Preference number: 6 (lower is better) Translates to: VQNVCRRSKASF*VNDQFQSLSKQ Trigger: CTGTTTAGAAAGGCTCTGGAACTGATCGTTGACTCAGAAACTGGCTTTGCTTCTTCTACAAACATTTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033006.14 ENSMUST00000138616.3 |
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