Pregenerated sensors for NSMAF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028245Ensembl transcript IDs: ENSMUST00000029910.12, ENSMUST00000124344.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTCAGAACCTGGGCAGCTTGAATACAGACTGTCCTCTTGGGGACTaGGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTT | + |
|
Preference number: 1 (lower is better) Translates to: RQNLGSLNTDCPLGD*AGQCWPVFLSPTGF Trigger: AAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAGCTGCCCAGGTTCTGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR CCA 90 bp | GAACCTGGGCAGCTTGAATACAGACTGTCCTCTTGGGGACTGAGCTaGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCT | + |
|
Preference number: 1 (lower is better) Translates to: EPGQLEYRLSSWGLS*PVLASVPQSDWVYP Trigger: AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAGCTGCCCAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR CCA 90 bp | TGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTaGGTTTATCCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGG | + |
|
Preference number: 1 (lower is better) Translates to: WGLSWPVLASVPQSD*VYPEHPVVFKLLSW Trigger: CCATGACAACAGTTTGAAGACTACTGGGTGTTCAGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR-3UTR CCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTTTCAAACTGTTGTCATaGTTGATAGTTCTCTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GLSWPVLASVPQSDWVYPFKLLS*LIVLCP Trigger: AGGACAGAGAACTATCAACCATGACAACAGTTTGAA...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR-3UTR TCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTTATCTGCTTAATGGATaGCAACAAATGGCTCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: EYRLSSWGLSWPVLASVPYLLNG*QQMALN Trigger: ATTCAGAGCCATTTGTTGTCATCCATTAAGCAGATA...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR-3UTR GCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTCTGCCATGTTATATCTaGTTAATGGATGACAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: GLSWPVLASVPQSDWVYPLPCYI*LMDDNK Trigger: TTTGTTGTCATCCATTAAGCAGATATAACATGGCAG...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR TCA 72 bp | CTGGGCAGCTTGAATACAGACTGTCCTCTTGGGGACTaGGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: LGSLNTDCPLGD*AGQCWPVFLSP Trigger: CGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAGCTGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR CCA 72 bp | AGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTaGGTTTATCCTGAACACCCAGTAGTCTTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SWPVLASVPQSD*VYPEHPVVFKL Trigger: CAGTTTGAAGACTACTGGGTGTTCAGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| 3UTR-3UTR CAA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTGTAGTCTTCAAACTGTaGTCATGGTTGATAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLSWPVLASVPQSDWVYPVVFKL*SWLIVL Trigger: GAGAACTATCAACCATGACAACAGTTTGAAGACTAC...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCTGGCTGCCCTGGTaGTGGACATGGAACGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQSWLPW*WTWNAV Trigger: CACAGCGTTCCATGTCCAGCACCAGGGCAGCCAGGA...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTGAAGTCTTGGGGACTTaGGGCCCAGGCTGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPEVLGT*GPGWKV Trigger: GACCTTCCAGCCTGGGCCTCAAGTCCCCAAGACTTC...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTCAGACAAAGCACCTCTaGGGCTCCTCTGAGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GLSWPVLASVPQSDWVYPQTKHL*GSSEAM Trigger: CATGGCCTCAGAGGAGCCGCAGAGGTGCTTTGTCTG...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCTTCCTGGCTGCCCTaGTGCTGGACATGGAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQSSWLP*CWTWNA Trigger: AGCGTTCCATGTCCAGCACCAGGGCAGCCAGGAAGA...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTGGTCGGCCAGGTTGTTaGGGTGGAGCAGGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVGRPGC*GGAGTG Trigger: ACCAGTACCTGCTCCACCTCAACAACCTGGCCGACC...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTTGGCTGCCCTGGTGCTaGACATGGAACGCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVWLPWC*TWNAVC Trigger: GCACACAGCGTTCCATGTCCAGCACCAGGGCAGCCA...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTCCGCTCACTGACTTTTaGTCCAAGGAGGTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSWPVLASVPQSDWVYPPLTDF*SKEVPN Trigger: GTTTGGGACCTCCTTGGAGCAAAAGTCAGTGAGCGG...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTAAACGACTCCTCCCCTaGAGAAACTGGGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSWPVLASVPQSDWVYPKRLLP*RNWGVC Trigger: ACAGACTCCCCAGTTTCTCCAGGGGAGGAGTCGTTT...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGGGAGGTGGTAAAGACTaGAGAGCCATTGCAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQGGGKD*RAIARH Trigger: GTGTCTTGCAATGGCTCTTCAGTCTTTACCACCTCC...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGGCCAACAGATCTTACTaGCAGCATCGTCATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQANRSY*QHRHVP Trigger: TGGGACATGACGATGCTGTCAGTAAGATCTGTTGGC...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTGCCTCCTTTTGTAAATaGGCCGGACATCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPASFCK*AGHPAV Trigger: CACTGCAGGATGTCCGGCGCATTTACAAAAGGAGGC...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTACGTCATCAACCATCTaGCCGCCTTGTCTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPTSSTI*PPCLFP Trigger: GGGAAAGAGACAAGGCGGGCAGATGGTTGATGACGT...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCTGCAGTGTTATCTaGACCACAGGTTTCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQSCSVI*TTGFGY Trigger: GTACCCGAAACCTGTGGTCCAGATAACACTGCAGGA...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTGTTTCGGGTACCCATTaGGAGGCTGGAAATACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVVSGTH*EAGNTG Trigger: GCCTGTATTTCCAGCCTCTCAATGGGTACCCGAAAC...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCCAAGAAGAACTTATaGCAGTGGTGTCTCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVPKKNL*QWCLPA Trigger: TGCCGGGAGACACCACTGTCATAAGTTCTTCTTGGG...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTTCTGTAATGCACACATaGCCAGGGTTCGTCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSWPVLASVPQSDWVYPSVMHT*PGFVTR Trigger: TCTAGTGACGAACCCTGGGCATGTGTGCATTACAGA...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTACCCATTGAGAGGCTaGAAATACAGGCTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQYPLRG*KYRLVS Trigger: AGACACCAGCCTGTATTTCCAGCCTCTCAATGGGTA...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCGTTATGGGCCCCTATaGCCTCACTCCCTTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVRYGPL*PHSLFA Trigger: AGCAAAAAGGGAGTGAGGCCATAGGGGCCCATAACG...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGGATGTGGCGACTATCTaGGCTAAAAGCAGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQDVATI*AKSSIT Trigger: TGTGATGCTGCTTTTAGCCCAGATAGTCGCCACATC...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTTCTTTAAGGAGCCTCTaGTTTTCCTTTCTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSWPVLASVPQSDWVYPSLRSL*FSFLPG Trigger: GCCAGGAAGAAAGGAAAATCAGAGGCTCCTTAAAGA...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGAGTGACTCCCATACATaGATCTTGGCTCAGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQSDSHT*ILAQAF Trigger: AAATGCCTGAGCCAAGATTCATGTATGGGAGTCACT...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTAGGTGTTACCATCTCTaGTTTGCACTCCATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPRCYHL*FALHVQ Trigger: CTGCACATGGAGTGCAAAGCAGAGATGGTAACACCT...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCCATGCCTTCTTTGGTaGCAGAAACTAACAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPPCLLW*QKLTVC Trigger: GCACACTGTTAGTTTCTGGCACCAAAGAAGGCATGG...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTATTTTCCTTTCTTCCTaGCTGCCCTGGTGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVIFLSS*LPWCWT Trigger: TGTCCAGCACCAGGGCAGCCAGGAAGAAAGGAAAAT...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGCCCATACATGAATCTTaGCTCAGGCATTTCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQPIHES*LRHFLV Trigger: TACCAGGAAATGCCTGAGCCAAGATTCATGTATGGG...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTAAAGAGCACATAGCCTaGAGAAGAGTAGTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPKEHIA*RRVVTP Trigger: GGGAGTCACTACTCTTCTCCAGGCTATGTGCTCTTT...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTGTGTCTTTTTGTTCCTaGCATTTCTGCAGGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: GLSWPVLASVPQSDWVYPVSFCS*HFCRNT Trigger: GGTGTTCCTGCAGAAATGCCAGGAACAAAAAGACAC...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTAGTACTCCTCCAAGTTaGGAAGCAGTAAGGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPSTPPS*EAVRKT Trigger: GGTTTTCCTTACTGCTTCTCAACTTGGAGGAGTACT...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTCCTCTGCGGCTCCTCTaGGGCCATGGAGGAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPPLRLL*GHGGDE Trigger: CTCATCTCCTCCATGGCCTCAGAGGAGCCGCAGAGG...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTGCCAGTAAGTCAAACTaGTGTCTTTTTGTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPASKSN*CLFVPG Trigger: GCCAGGAACAAAAAGACACCAGTTTGACTTACTGGC...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTACTGGGACAGGTCATTaGAGCTGCGGTCGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPTGTGH*SCGRPG Trigger: ACCTGGCCGACCGCAGCTGCAATGACCTGTCCCAGT...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTGAATGGCATGAAGTCTaGTGTAATAAAGTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLSWPVLASVPQSDWVYPEWHEV*CNKVAV Trigger: TACAGCCACTTTATTACACCAGACTTCATGCCATTC...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTTACAGCCTGTCGTTATaGCAACAGATCTTACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVYSLSL*QQILLT Trigger: TGTCAGTAAGATCTGTTGGCATAACGACAGGCTGTA...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGAAATTTGGGTCAGCATaGCTACTTTTTCATCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSWGLSWPVLASVPQKFGSA*LLFHQD Trigger: ATCCTGATGAAAAAGTAGCCATGCTGACCCAAATTT...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTTTCAAAGTGGAATCTTaGGAGGTGGTAAAGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EYRLSSWGLSWPVLASVPFKVES*EVVKTE Trigger: TTCAGTCTTTACCACCTCCCAAGATTCCACTTTGAA...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTTCCTTTCTTCCTGGCTaGCCTGGTGCTGGACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPSFLPG*PGAGHG Trigger: TCCATGTCCAGCACCAGGGCAGCCAGGAAGAAAGGA...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTGTTATCATGGCCATTTaGTCACCAAGTTTATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLSSWGLSWPVLASVVIMAI*SPSLSR Trigger: CCTTGATAAACTTGGTGACCAAATGGCCATGATAAC...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTCTCCCCTGGAGAAACTaGGGAGTCTGTCAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPLPWRN*GVCQRS Trigger: GCTTCTCTGACAGACTCCCCAGTTTCTCCAGGGGAG...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTTGTTCCTGGCATTTCTaGAGGAACACCGGACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPCSWHF*RNTGPH Trigger: GTGTGGTCCGGTGTTCCTGCAGAAATGCCAGGAACA...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTCCAAGCCCAAAGGCATaGGGCCGTGCCTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGPSPKA*GRASFC Trigger: ACAAAAGGAGGCACGGCCTCATGCCTTTGGGCTTGG...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR TCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTAGGCCATGGAGGAGATaGGCATGCCCGTCTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGRPWRR*ACPSAH Trigger: ATGTGCAGACGGGCATGCTCATCTCCTCCATGGCCT...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTGATCCTTCGAGGATGTaGTGTCACAAACAGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPDPSRM*CHKQLF Trigger: AAACAGCTGTTTGTGACACCACATCCTCGAAGGATC...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTTCACCATGCCTTCTTTaGTGCCAGAAACTAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPSPCLL*CQKLTV Trigger: CACTGTTAGTTTCTGGCACCAAAGAAGGCATGGTGA...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTATGCGCCGGACATCCTaGAGTGTTATCTGGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGMRRTS*SVIWTT Trigger: TGTGGTCCAGATAACACTGCAGGATGTCCGGCGCAT...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTATCACTTATTATCCATaGAAACACAGGGTACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPITYYP*KHRVLG Trigger: TCCCAGTACCCTGTGTTTCCATGGATAATAAGTGAT...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTGGTGTTCTAGGTACGTaGCGATATAAAAATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPGVLGT*RYKNRD Trigger: ATCTCTATTTTTATATCGCCACGTACCTAGAACACC...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTCCAAATTCCAAAATTTaGGTCAGCATGGCTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPPNSKI*VSMATF Trigger: AAAAGTAGCCATGCTGACCCAAATTTTGGAATTTGG...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTCTCTTTAAAATCCGTTaGACCATCCAAACAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPLFKIR*TIQTVF Trigger: AAAAACTGTTTGGATGGTGCAACGGATTTTAAAGAG...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTGCATCCTTGTTCTTCTaGAGGAAGTCTTGGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGASLFF*RKSWGL Trigger: AAGTCCCCAAGACTTCCTGCAGAAGAACAAGGATGC...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTAGACTGAAGAGCCATTaGAAGACACTGCTATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGRLKSH*KTLLSL Trigger: CAGGGATAGCAGTGTCTTGCAATGGCTCTTCAGTCT...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTGAGAAGCGTTGTAGCTaGAGGCTTGGGACAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGEKRCS*RLGTNF Trigger: AAAGTTTGTCCCAAGCCTCCAGCTACAACGCTTCTC...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTCCCATCAGTGTATCTTaGCGTCTTCCAAATGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGPISVS*RLPNAM Trigger: CATAGCATTTGGAAGACGCCAAGATACACTGATGGG...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTGCTTTGCACTCCATGTaGAGCTTTTCAGAAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGALHSM*SFSETL Trigger: AAGTGTTTCTGAAAAGCTGCACATGGAGTGCAAAGC...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTCACAAACAGCTGTTTTaGTGTCTGCCCAAATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGHKQLF*CLPKFQ Trigger: TTGGAATTTGGGCAGACACCAAAACAGCTGTTTGTG...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR GCA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTGGTGCCACAATGTTGTaGTCCTTAATAAAGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGGATML*SLIKYI Trigger: GATATACTTTATTAAGGAGCACAACATTGTGGCACC...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTCGGTCGGCCAGGTTGTaGAGGTGGAGCAGGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSWPVLASVPQSDWVYPRSARL*RWSRYW Trigger: CCAGTACCTGCTCCACCTCAACAACCTGGCCGACCG...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTCTGCGGTCGGCCAGGTaGTTGAGGTGGAGCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GLSWPVLASVPQSDWVYPLRSAR*LRWSRY Trigger: GTACCTGCTCCACCTCAACAACCTGGCCGACCGCAG...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTTACTGGGACAGGTCATaGCAGCTGCGGTCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EYRLSSWGLSWPVLASVPYWDRS*QLRSAR Trigger: CCTGGCCGACCGCAGCTGCAATGACCTGTCCCAGTA...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | CTCTGCGGCTCCTCTGAGGCCATGGAGGAGATGAGCATGCCCGTCTaGACATCAATCACATTGAGACATCCATCTACGCCCGTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCGSSEAMEEMSMPV*TSITLRHPSTPVLR Trigger: CCTCAGCACGGGCGTAGATGGATGTCTCAATGTGATTGATGTGCAGACGGGCATGCTCATCTCCTCCATGGCCTCAGAGGAGCCGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | TGGGGACTTGAGGCCCAGGCTGGAAGGTCCACGTCATCAACCATCTaGCCGCCTTGTCTCTTTCCCAGATCCAGCTTCAGACTATTGACC | + |
|
Preference number: 5 (lower is better) Translates to: WGLEAQAGRSTSSTI*PPCLFPRSSFRLLT Trigger: GGTCAATAGTCTGAAGCTGGATCTGGGAAAGAGACAAGGCGGGCAGATGGTTGATGACGTGGACCTTCCAGCCTGGGCCTCAAGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGGGTTTCGGGTACCCATaGAGAGGCTGGAAATACAGG | + |
|
Preference number: 5 (lower is better) Translates to: YRLSSWGLSWPVLASVPQGFGYP*RGWKYR Trigger: CCTGTATTTCCAGCCTCTCAATGGGTACCCGAAACC...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTAACCATCTGCCCGCCTaGTCTCTTTCCCAGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LEYRLSSWGLSWPVLASVNHLPA*SLSQIQ Trigger: CTGGATCTGGGAAAGAGACAAGGCGGGCAGATGGTT...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | GCTTTCCTCAGTCAGGTCTTCAAACGACTCCTCCCCTGGAGAAACTaGGGAGTCTGTCAGAGAAGCGTTGTAGCTGGAGGCTTGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: AFLSQVFKRLLPWRN*GVCQRSVVAGGLGQ Trigger: TTGTCCCAAGCCTCCAGCTACAACGCTTCTCTGACAGACTCCCCAGTTTCTCCAGGGGAGGAGTCGTTTGAAGACCTGACTGAGGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | CAGAGTTCTGCTTTCCTCAGTCAGGTCTTCAAACGACTCCTCCCCTaGAGAAACTGGGGAGTCTGTCAGAGAAGCGTTGTAGCTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSSAFLSQVFKRLLP*RNWGVCQRSVVAGG Trigger: GCCTCCAGCTACAACGCTTCTCTGACAGACTCCCCAGTTTCTCCAGGGGAGGAGTCGTTTGAAGACCTGACTGAGGAAAGCAGAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCTTTCCAAGGCATCCTaGTTCTTCTGCAGGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EYRLSSWGLSWPVLASVPLSKAS*FFCRKS Trigger: AGACTTCCTGCAGAAGAACAAGGATGCCTTGGAAAG...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCACAAACAGCTGTTTaGGTGTCTGCCCAAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YRLSSWGLSWPVLASVPQSQTAV*VSAQIP Trigger: TGGAATTTGGGCAGACACCAAAACAGCTGTTTGTGA...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCCATCAGTGTATCTaGGCGTCTTCCAAATGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: YRLSSWGLSWPVLASVPQSHQCI*ASSKCY Trigger: ATAGCATTTGGAAGACGCCAAGATACACTGATGGGA...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTTCACCATGCCTTCTTaGGTGCCAGAAACTAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: YRLSSWGLSWPVLASVPQFTMPS*VPETNS Trigger: ACTGTTAGTTTCTGGCACCAAAGAAGGCATGGTGAA...CTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | GCTCATGTAGCTGCAGCTTGGCGATATTACTCCAGGCCAGAGTTCTaGTTTCCTCAGTCAGGTCTTCAAACGACTCCTCCCCTGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AHVAAAWRYYSRPEF*FPQSGLQTTPPLEK Trigger: TTTCTCCAGGGGAGGAGTCGTTTGAAGACCTGACTGAGGAAAGCAGAACTCTGGCCTGGAGTAATATCGCCAAGCTGCAGCTACATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | TGCAGTGTTATCTGGACCACAGGTTTCGGGTACCCATTGAGAGGCTaGAAATACAGGCTGGTGTCTGTAATGCACACATGCCCAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSVIWTTGFGYPLRG*KYRLVSVMHTCPGF Trigger: GAACCCTGGGCATGTGTGCATTACAGACACCAGCCTGTATTTCCAGCCTCTCAATGGGTACCCGAAACCTGTGGTCCAGATAACACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTGTTACCATCTCTGCTTaGCACTCCATGTGCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEYRLSSWGLSWPVLASVVTISA*HSMCSF Trigger: AAAGCTGCACATGGAGTGCAAAGCAGAGATGGTAAC...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTCCCAAATTCCAAAATTaGGGTCAGCATGGCTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLSWPVLASVPQSDWVYPPKFQN*GQHGYF Trigger: AAAGTAGCCATGCTGACCCAAATTTTGGAATTTGGG...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTTTTCCAGAACATAATTaGTCTGTCTTCCCCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EYRLSSWGLSWPVLASVPFPEHN*SVFPSG Trigger: ACCGGAGGGGAAGACAGACAAATTATGTTCTGGAAA...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | GAGCACATAGCCTGGAGAAGAGTAGTGACTCCCATACATGAATCTTaGCTCAGGCATTTCCTGGTATCGAGTCAGCAGTCTCTCCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EHIAWRRVVTPIHES*LRHFLVSSQQSLQS Trigger: CGACTGGAGAGACTGCTGACTCGATACCAGGAAATGCCTGAGCCAAGATTCATGTATGGGAGTCACTACTCTTCTCCAGGCTATGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTCAGTCCGACTGGGTTTATCCTGAATGGGCTGAGATATaGCATCTGGTTCAAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSWPVLASVPQSDWVYPEWAEI*HLVQKS Trigger: TGATTTTTGAACCAGATGCAATATCTCAGCCCATTC...AGGATAAACCCAGTCGGACTGAGGAACACTGGCCAGCACTGGCCAGCTCAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 90 bp | GGACATGGAACGCTGTGTGCTGCTCAAAGTAGTACTCCTCCAAGTTaGGAAGCAGTAAGGAAAACCTCTCCTTGGAGTAGAGCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHGTLCAAQSSTPPS*EAVRKTSPWSRAAA Trigger: AGCTGCAGCTCTACTCCAAGGAGAGGTTTTCCTTACTGCTTCTCAACTTGGAGGAGTACTACTTTGAGCAGCACACAGCGTTCCATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029910.12 ENSMUST00000124344.2 |
||
| CDS GCA 90 bp | ATCCCTGTAACCGCCTCTTTGTGGATCTTGTACTGCTCATGTAGCTaGAGCTTGGCGATATTACTCCAGGCCAGAGTTCTGCTTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IPVTASLWILYCSCS*SLAILLQARVLLSS Trigger: TGAGGAAAGCAGAACTCTGGCCTGGAGTAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGAGGCGGTTACAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | CAAGACACTGCTATCCCTGTAACCGCCTCTTTGTGGATCTTGTACTaGTCATGTAGCTGCAGCTTGGCGATATTACTCCAGGCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QDTAIPVTASLWILY*SCSCSLAILLQARV Trigger: AACTCTGGCCTGGAGTAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGAGGCGGTTACAGGGATAGCAGTGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | GAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTCCTTACGGTGCCACAATGTaGTGCTCCTTAATAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EYRLSSWGLSWPVLASVPYGATM*CSLIKY Trigger: ATACTTTATTAAGGAGCACAACATTGTGGCACCGTA...AGGAACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | CTTGAATACAGACTGTCCTCTTGGGGACTGAGCTGGCCAGTGCTGGCCAGTGTTGTTGTAGCTGGAGGCTaGGGACAAACTTTTAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LEYRLSSWGLSWPVLASVVVAGG*GQTFKL Trigger: AAGTTTAAAAGTTTGTCCCAAGCCTCCAGCTACAAC...AACACTGGCCAGCACTGGCCAGCTCAGTCCCCAAGAGGACAGTCTGTATTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 90 bp | CCCAAGATCCAGAGTACAGCCTGTCGTTATGCCAACAGATCTTACTaGCAGCATCGTCATGTCCCATCAGTGTATCTTGGCGTCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PKIQSTACRYANRSY*QHRHVPSVYLGVFQ Trigger: TTGGAAGACGCCAAGATACACTGATGGGACATGACGATGCTGTCAGTAAGATCTGTTGGCATAACGACAGGCTGTACTCTGGATCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 90 bp | GGTAAAAGAGCACATAGCCTGGAGAAGAGTAGTGACTCCCATACATaGATCTTGGCTCAGGCATTTCCTGGTATCGAGTCAGCAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKRAHSLEKSSDSHT*ILAQAFPGIESAVS Trigger: AGAGACTGCTGACTCGATACCAGGAAATGCCTGAGCCAAGATTCATGTATGGGAGTCACTACTCTTCTCCAGGCTATGTGCTCTTTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | ACCTTCACAGTAGAGTCCCAAGATCCAGAGTACAGCCTGTCGTTATaGCAACAGATCTTACTGACAGCATCGTCATGTCCCATCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TFTVESQDPEYSLSL*QQILLTASSCPISV Trigger: TACACTGATGGGACATGACGATGCTGTCAGTAAGATCTGTTGGCATAACGACAGGCTGTACTCTGGATCTTGGGACTCTACTGTGAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | GTATTGACGCTGACATCATGTTCAAGCTCAGCCAGTAAGTCAAACTaGTGTCTTTTTGTTCCTGGCATTTCTGCAGGAACACCGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLTLTSCSSSASKSN*CLFVPGISAGTPDH Trigger: GTGGTCCGGTGTTCCTGCAGAAATGCCAGGAACAAAAAGACACCAGTTTGACTTACTGGCTGAGCTTGAACATGATGTCAGCGTCAATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | TGGCGACTATCTGGGCTAAAAGCAGCATCACATACTGTCCCTGAATaGCATGAAGTCTGGTGTAATAAAGTGGCTGTAGTGAGGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WRLSGLKAASHTVPE*HEVWCNKVAVVRSQ Trigger: TTGGGACCTCACTACAGCCACTTTATTACACCAGACTTCATGCCATTCAGGGACAGTATGTGATGCTGCTTTTAGCCCAGATAGTCGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | ACACATGCCCAGGGTTCGTCACTAGAGGTGTTACCATCTCTGCTTTaGACTCCATGTGCAGCTTTTCAGAAACACTTTGGAACCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: THAQGSSLEVLPSLL*TPCAAFQKHFGTCF Trigger: AAAACAGGTTCCAAAGTGTTTCTGAAAAGCTGCACATGGAGTGCAAAGCAGAGATGGTAACACCTCTAGTGACGAACCCTGGGCATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | CATATACTCTGGTGCGATCCTAACGAGGTAAAAGAGCACATAGCCTaGAGAAGAGTAGTGACTCCCATACATGAATCTTGGCTCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HILWCDPNEVKEHIA*RRVVTPIHESWLRH Trigger: ATGCCTGAGCCAAGATTCATGTATGGGAGTCACTACTCTTCTCCAGGCTATGTGCTCTTTTACCTCGTTAGGATCGCACCAGAGTATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTGGAAGGTTGCAGGATTaGACAAATCTAGCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPGRLQD*TNLALG Trigger: GCCCAGAGCTAGATTTGTCAAATCCTGCAACCTTCC...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 90 bp | GGGCTAAAAGCAGCATCACATACTGTCCCTGAATGGCATGAAGTCTaGTGTAATAAAGTGGCTGTAGTGAGGTCCCAAATATTCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: GLKAASHTVPEWHEV*CNKVAVVRSQIFTM Trigger: CATGGTGAATATTTGGGACCTCACTACAGCCACTTTATTACACCAGACTTCATGCCATTCAGGGACAGTATGTGATGCTGCTTTTAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTGGAAGTCTTGGGGACTaGAGGCCCAGGCTGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGGSLGD*RPRLEG Trigger: ACCTTCCAGCCTGGGCCTCAAGTCCCCAAGACTTCC...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTGGCCTCACTCCCTTTTaGCTTATAGCCAAATATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPGLTPF*LIAKYQ Trigger: CTGATATTTGGCTATAAGCAAAAAGGGAGTGAGGCC...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | GGGTTCGTCACTAGAGGTGTTACCATCTCTGCTTTGCACTCCATGTaGAGCTTTTCAGAAACACTTTGGAACCTGTTTTTGTCAAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: GFVTRGVTISALHSM*SFSETLWNLFLSND Trigger: ATCATTTGACAAAAACAGGTTCCAAAGTGTTTCTGAAAAGCTGCACATGGAGTGCAAAGCAGAGATGGTAACACCTCTAGTGACGAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTCTTTGGAACCTGTTTTaGTCAAATGATGTCCTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPLWNLF*SNDVLA Trigger: GGCTAGGACATCATTTGACAAAAACAGGTTCCAAAG...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | CTTTGGAACCTGTTTTTGTCAAATGATGTCCTAGCCAGACGTGACTaGAAGATAGCTGTTATCATGGCCATTTGGTCACCAAGTTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: LWNLFLSNDVLARRD*KIAVIMAIWSPSLS Trigger: TGATAAACTTGGTGACCAAATGGCCATGATAACAGCTATCTTGCAGTCACGTCTGGCTAGGACATCATTTGACAAAAACAGGTTCCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | CCTGAACACCCAGTAGTCTTCAAACTGTTGTCATGGTTGATAGTTCTCTGTCCTTTTGCAAAGTGTTTATaGGCTCCATTTTCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PEHPVVFKLLSWLIVLCPFAKCL*APFSPC Trigger: ACATGGAGAAAATGGAGCCAATAAACACTTTGCAAA...AGGACAGAGAACTATCAACCATGACAACAGTTTGAAGACTACTGGGTGTTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTGCCTCTTTGTGGATCTaGTACTGCTCATGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGASLWI*YCSCSC Trigger: GCAGCTACATGAGCAGTACAAGATCCACAAAGAGGC...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 90 bp | ATGCTATGGAATAAAAATAGACGTTGTTATCCCAAGAAGAACTTATaGCAGTGGTGTCTCCCGGCAACAGTAAACAAGAGGATAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MLWNKNRRCYPKKNL*QWCLPATVNKRIKP Trigger: TGGCTTTATCCTCTTGTTTACTGTTGCCGGGAGACACCACTGTCATAAGTTCTTCTTGGGATAACAACGTCTATTTTTATTCCATAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 90 bp | GACAGCATCGTCATGTCCCATCAGTGTATCTTGGCGTCTTCCAAATaGTATGGAATAAAAATAGACGTTGTTATCCCAAGAAGAACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: DSIVMSHQCILASSK*YGIKIDVVIPRRTY Trigger: ATAAGTTCTTCTTGGGATAACAACGTCTATTTTTATTCCATAGCATTTGGAAGACGCCAAGATACACTGATGGGACATGACGATGCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTTGCACATCAATCACATaGAGACATCCATCTACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGCTSIT*RHPSTP Trigger: GGGCGTAGATGGATGTCTCAATGTGATTGATGTGCA...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTGACAAACTTTTAAACTaGGGGGTGATCCTTCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGDKLLN*GVILRG Trigger: TCCTCGAAGGATCACCCCCAAGTTTAAAAGTTTGTC...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGTAAAACTTCTAAGTACTATCATTGCACATTCACCAGTTTAAAGTCTGGTCTCACAGCATTTAAATaGATAGTATTGACGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CGKTSKYYHCTFTSLKSGLTAFK*IVLTLT Trigger: TGTCAGCGTCAATACTATCAATTTAAATGCTGTGAG...ACCAGACTTTAAACTGGTGAATGTGCAATGATAGTACTTAGAAGTTTTACCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 72 bp | GGGACAGGTCATTGCAGCTGCGGTCGGCCAGGTTGTTaGGGTGGAGCAGGTACTGGTAGTTGGAAAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GTGHCSCGRPGC*GGAGTGSWKGA Trigger: GGCACCTTTCCAACTACCAGTACCTGCTCCACCTCAACAACCTGGCCGACCGCAGCTGCAATGACCTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | CGCTTTCCAAGGCATCCTTGTTCTTCTGCAGGAAGTCTTGGGGACTaGAGGCCCAGGCTGGAAGGTCCACGTCATCAACCATCTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RFPRHPCSSAGSLGD*RPRLEGPRHQPSAR Trigger: GCGGGCAGATGGTTGATGACGTGGACCTTCCAGCCTGGGCCTCAAGTCCCCAAGACTTCCTGCAGAAGAACAAGGATGCCTTGGAAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 72 bp | ATTTCCATCCCAGACAAAGCACCTCTGCGGCTCCTCTaGGGCCATGGAGGAGATGAGCATGCCCGTCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISIPDKAPLRLL*GHGGDEHARLH Trigger: GTGCAGACGGGCATGCTCATCTCCTCCATGGCCTCAGAGGAGCCGCAGAGGTGCTTTGTCTGGGATGGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | GAGGCCCAGGCTGGAAGGTCCACGTCATCAACCATCTaGCCGCCTTGTCTCTTTCCCAGATCCAGCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EAQAGRSTSSTI*PPCLFPRSSFR Trigger: TCTGAAGCTGGATCTGGGAAAGAGACAAGGCGGGCAGATGGTTGATGACGTGGACCTTCCAGCCTGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 72 bp | AGTCAGGTCTTCAAACGACTCCTCCCCTGGAGAAACTaGGGAGTCTGTCAGAGAAGCGTTGTAGCTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SQVFKRLLPWRN*GVCQRSVVAGG Trigger: GCCTCCAGCTACAACGCTTCTCTGACAGACTCCCCAGTTTCTCCAGGGGAGGAGTCGTTTGAAGACCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | AGGCATCCTTGTTCTTCTGCAGGAAGTCTTGGGGACTaGAGGCCCAGGCTGGAAGGTCCACGTCATCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: RHPCSSAGSLGD*RPRLEGPRHQP Trigger: TGGTTGATGACGTGGACCTTCCAGCCTGGGCCTCAAGTCCCCAAGACTTCCTGCAGAAGAACAAGGATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | GAGGCCATGGAGGAGATGAGCATGCCCGTCTGCACATCAATCACATaGAGACATCCATCTACGCCCGTGCTGAGGATGTGGCGACTATCT | + |
|
Preference number: 6 (lower is better) Translates to: EAMEEMSMPVCTSIT*RHPSTPVLRMWRLS Trigger: AGATAGTCGCCACATCCTCAGCACGGGCGTAGATGGATGTCTCAATGTGATTGATGTGCAGACGGGCATGCTCATCTCCTCCATGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | GCTGCAGCTTGGCGATATTACTCCAGGCCAGAGTTCTaGTTTCCTCAGTCAGGTCTTCAAACGACTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAWRYYSRPEF*FPQSGLQTTPP Trigger: GGGAGGAGTCGTTTGAAGACCTGACTGAGGAAAGCAGAACTCTGGCCTGGAGTAATATCGCCAAGCTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | GGCTGGAAGGTCCACGTCATCAACCATCTGCCCGCCTaGTCTCTTTCCCAGATCCAGCTTCAGACTATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GWKVHVINHLPA*SLSQIQLQTID Trigger: GTCAATAGTCTGAAGCTGGATCTGGGAAAGAGACAAGGCGGGCAGATGGTTGATGACGTGGACCTTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | GAGGAGATGAGCATGCCCGTCTGCACATCAATCACATaGAGACATCCATCTACGCCCGTGCTGAGGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: EEMSMPVCTSIT*RHPSTPVLRMW Trigger: CCACATCCTCAGCACGGGCGTAGATGGATGTCTCAATGTGATTGATGTGCAGACGGGCATGCTCATCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 72 bp | GCTTTCCTCAGTCAGGTCTTCAAACGACTCCTCCCCTaGAGAAACTGGGGAGTCTGTCAGAGAAGCGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AFLSQVFKRLLP*RNWGVCQRSVV Trigger: TACAACGCTTCTCTGACAGACTCCCCAGTTTCTCCAGGGGAGGAGTCGTTTGAAGACCTGACTGAGGAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | CGGACATCCTGCAGTGTTATCTGGACCACAGGTTTCGGGTACCCATaGAGAGGCTGGAAATACAGGCTGGTGTCTGTAATGCACACATGC | + |
|
Preference number: 6 (lower is better) Translates to: RTSCSVIWTTGFGYP*RGWKYRLVSVMHTC Trigger: GCATGTGTGCATTACAGACACCAGCCTGTATTTCCAGCCTCTCAATGGGTACCCGAAACCTGTGGTCCAGATAACACTGCAGGATGTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | GTAACCGCCTCTTTGTGGATCTTGTACTGCTCATGTAGCTGCAGCTaGGCGATATTACTCCAGGCCAGAGTTCTGCTTTCCTCAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VTASLWILYCSCSCS*AILLQARVLLSSVR Trigger: CCTGACTGAGGAAAGCAGAACTCTGGCCTGGAGTAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGAGGCGGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | CCATTGCAAGACACTGCTATCCCTGTAACCGCCTCTTTGTGGATCTaGTACTGCTCATGTAGCTGCAGCTTGGCGATATTACTCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLQDTAIPVTASLWI*YCSCSCSLAILLQA Trigger: GGCCTGGAGTAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGAGGCGGTTACAGGGATAGCAGTGTCTTGCAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | GGCTGGAAATACAGGCTGGTGTCTGTAATGCACACATaGCCAGGGTTCGTCACTAGAGGTGTTACCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GWKYRLVSVMHT*PGFVTRGVTIS Trigger: AGAGATGGTAACACCTCTAGTGACGAACCCTGGGCATGTGTGCATTACAGACACCAGCCTGTATTTCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | ACCGCCTCTTTGTGGATCTTGTACTGCTCATGTAGCTaGAGCTTGGCGATATTACTCCAGGCCAGAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TASLWILYCSCS*SLAILLQARVL Trigger: CAGAACTCTGGCCTGGAGTAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGAGGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 72 bp | ATCTGGACCACAGGTTTCGGGTACCCATTGAGAGGCTaGAAATACAGGCTGGTGTCTGTAATGCACACATGC | + |
|
Preference number: 6 (lower is better) Translates to: IWTTGFGYPLRG*KYRLVSVMHTC Trigger: GCATGTGTGCATTACAGACACCAGCCTGTATTTCCAGCCTCTCAATGGGTACCCGAAACCTGTGGTCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | GCTATCCCTGTAACCGCCTCTTTGTGGATCTTGTACTaGTCATGTAGCTGCAGCTTGGCGATATTACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AIPVTASLWILY*SCSCSLAILLQ Trigger: CTGGAGTAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGAGGCGGTTACAGGGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | GTAGAGTCCCAAGATCCAGAGTACAGCCTGTCGTTATaGCAACAGATCTTACTGACAGCATCGTCATGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VESQDPEYSLSL*QQILLTASSCP Trigger: GGGACATGACGATGCTGTCAGTAAGATCTGTTGGCATAACGACAGGCTGTACTCTGGATCTTGGGACTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 72 bp | GCCTGGAGAAGAGTAGTGACTCCCATACATGAATCTTaGCTCAGGCATTTCCTGGTATCGAGTCAGCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AWRRVVTPIHES*LRHFLVSSQQS Trigger: AGACTGCTGACTCGATACCAGGAAATGCCTGAGCCAAGATTCATGTATGGGAGTCACTACTCTTCTCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | TGCAGTGTTATCTGGACCACAGGTTTCGGGTACCCATaGAGAGGCTGGAAATACAGGCTGGTGTCTGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: CSVIWTTGFGYP*RGWKYRLVSVM Trigger: CATTACAGACACCAGCCTGTATTTCCAGCCTCTCAATGGGTACCCGAAACCTGTGGTCCAGATAACACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | GTGGAATCTTGGGAGGTGGTAAAGACTGAAGAGCCATaGCAAGACACTGCTATCCCTGTAACCGCCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VESWEVVKTEEP*QDTAIPVTASL Trigger: CAAAGAGGCGGTTACAGGGATAGCAGTGTCTTGCAATGGCTCTTCAGTCTTTACCACCTCCCAAGATTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 72 bp | GCACATAGCCTGGAGAAGAGTAGTGACTCCCATACATaGATCTTGGCTCAGGCATTTCCTGGTATCGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AHSLEKSSDSHT*ILAQAFPGIES Trigger: TGACTCGATACCAGGAAATGCCTGAGCCAAGATTCATGTATGGGAGTCACTACTCTTCTCCAGGCTATGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 72 bp | CAGAGTACAGCCTGTCGTTATGCCAACAGATCTTACTaGCAGCATCGTCATGTCCCATCAGTGTATCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSTACRYANRSY*QHRHVPSVYLG Trigger: GCCAAGATACACTGATGGGACATGACGATGCTGTCAGTAAGATCTGTTGGCATAACGACAGGCTGTACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | CCAGGGTTCGTCACTAGAGGTGTTACCATCTCTGCTTaGCACTCCATGTGCAGCTTTTCAGAAACACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGFVTRGVTISA*HSMCSFSETLW Trigger: CCAAAGTGTTTCTGAAAAGCTGCACATGGAGTGCAAAGCAGAGATGGTAACACCTCTAGTGACGAACCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | TCTTTGTGGATCTTGTACTGCTCATGTAGCTGCAGCTaGGCGATATTACTCCAGGCCAGAGTTCTGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLWILYCSCSCS*AILLQARVLLS Trigger: GGAAAGCAGAACTCTGGCCTGGAGTAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 72 bp | GACACTGCTATCCCTGTAACCGCCTCTTTGTGGATCTaGTACTGCTCATGTAGCTGCAGCTTGGCGATATTA | + |
|
Preference number: 6 (lower is better) Translates to: DTAIPVTASLWI*YCSCSCSLAIL Trigger: TAATATCGCCAAGCTGCAGCTACATGAGCAGTACAAGATCCACAAAGAGGCGGTTACAGGGATAGCAGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | CACACATGCCCAGGGTTCGTCACTAGAGGTGTTACCATCTCTGCTTaGCACTCCATGTGCAGCTTTTCAGAAACACTTTGGAACCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: HTCPGFVTRGVTISA*HSMCSFSETLWNLF Trigger: AAACAGGTTCCAAAGTGTTTCTGAAAAGCTGCACATGGAGTGCAAAGCAGAGATGGTAACACCTCTAGTGACGAACCCTGGGCATGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | ATCTTCAAAGTGGAATCTTGGGAGGTGGTAAAGACTGAAGAGCCATaGCAAGACACTGCTATCCCTGTAACCGCCTCTTTGTGGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IFKVESWEVVKTEEP*QDTAIPVTASLWIL Trigger: CAAGATCCACAAAGAGGCGGTTACAGGGATAGCAGTGTCTTGCAATGGCTCTTCAGTCTTTACCACCTCCCAAGATTCCACTTTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 72 bp | ACGCTGTGTGCTGCTCAAAGTAGTACTCCTCCAAGTTaGGAAGCAGTAAGGAAAACCTCTCCTTGGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TLCAAQSSTPPS*EAVRKTSPWSR Trigger: TCTACTCCAAGGAGAGGTTTTCCTTACTGCTTCTCAACTTGGAGGAGTACTACTTTGAGCAGCACACAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029910.12 ENSMUST00000124344.2 |
||
| CDS CCA 72 bp | TGGTGCGATCCTAACGAGGTAAAAGAGCACATAGCCTaGAGAAGAGTAGTGACTCCCATACATGAATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WCDPNEVKEHIA*RRVVTPIHESW Trigger: CCAAGATTCATGTATGGGAGTCACTACTCTTCTCCAGGCTATGTGCTCTTTTACCTCGTTAGGATCGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 72 bp | CATCTTCAAAGTGGAATCTTGGGAGGTGGTAAAGACTaGAGAGCCATTGCAAGACACTGCTATCCCTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: HLQSGILGGGKD*RAIARHCYPCN Trigger: GTTACAGGGATAGCAGTGTCTTGCAATGGCTCTTCAGTCTTTACCACCTCCCAAGATTCCACTTTGAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 72 bp | GCAGCATCACATACTGTCCCTGAATGGCATGAAGTCTaGTGTAATAAAGTGGCTGTAGTGAGGTCCCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: AASHTVPEWHEV*CNKVAVVRSQI Trigger: TATTTGGGACCTCACTACAGCCACTTTATTACACCAGACTTCATGCCATTCAGGGACAGTATGTGATGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CCA 72 bp | TCTGGGCTAAAAGCAGCATCACATACTGTCCCTGAATaGCATGAAGTCTGGTGTAATAAAGTGGCTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SGLKAASHTVPE*HEVWCNKVAVV Trigger: CACTACAGCCACTTTATTACACCAGACTTCATGCCATTCAGGGACAGTATGTGATGCTGCTTTTAGCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | CTGTTTTTGTCAAATGATGTCCTAGCCAGACGTGACTaGAAGATAGCTGTTATCATGGCCATTTGGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LFLSNDVLARRD*KIAVIMAIWSP Trigger: TGGTGACCAAATGGCCATGATAACAGCTATCTTGCAGTCACGTCTGGCTAGGACATCATTTGACAAAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | ACTAGAGGTGTTACCATCTCTGCTTTGCACTCCATGTaGAGCTTTTCAGAAACACTTTGGAACCTGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRGVTISALHSM*SFSETLWNLFL Trigger: CAAAAACAGGTTCCAAAGTGTTTCTGAAAAGCTGCACATGGAGTGCAAAGCAGAGATGGTAACACCTCTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS CAA 90 bp | AATAAAGTGGCTGTAGTGAGGTCCCAAATATTCACCATGCCTTCTTaGGTGCCAGAAACTAACAGTGTGCTCACAGCATTTAAATTGATA | + |
|
Preference number: 6 (lower is better) Translates to: NKVAVVRSQIFTMPS*VPETNSVLTAFKLI Trigger: TATCAATTTAAATGCTGTGAGCACACTGTTAGTTTCTGGCACCAAAGAAGGCATGGTGAATATTTGGGACCTCACTACAGCCACTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS TCA 72 bp | AATAAAAATAGACGTTGTTATCCCAAGAAGAACTTATaGCAGTGGTGTCTCCCGGCAACAGTAAACAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NKNRRCYPKKNL*QWCLPATVNKR Trigger: CCTCTTGTTTACTGTTGCCGGGAGACACCACTGTCATAAGTTCTTCTTGGGATAACAACGTCTATTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||
| CDS GCA 72 bp | GACATACTCCATTTTTCCCCGCTCTATCTTATACGGTaGCACAATGTTGTGCTCCTTAATAAAGTATATCTG | + |
|
Preference number: 6 (lower is better) Translates to: DILHFSPLYLIR*HNVVLLNKVYL Trigger: CAGATATACTTTATTAAGGAGCACAACATTGTGGCACCGTATAAGATAGAGCGGGGAAAAATGGAGTATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029910.12 |
||