Pregenerated sensors for NSL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062510Ensembl transcript IDs: ENSMUST00000076952.12, ENSMUST00000078259.8, ENSMUST00000139340.8
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCCAAGCCCACGCTCCCATCCTGCTGCACAGCTCTTGCTTCAGTaGAATCCCACCATGCTGCCTCCCAGTCTGCTCTCTAGCCTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: APSPRSHPAAQLLLQ*NPTMLPPSLLSSLA Trigger: GGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTGTGCAGCAGGATGGGAGCGTGGGCTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | CCAGCTTCTGGGGAAAGCCACGAGCATGTAGTCATCCTGGCAGGCTaGAGGAGCACAGGAGCCAGCGGGTTGTGGAGAGCAGCAGCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: PASGESHEHVVILAG*RSTGASGLWRAAAG Trigger: TCCTGCTGCTGCTCTCCACAACCCGCTGGCTCCTGTGCTCCTCCAGCCTGCCAGGATGACTACATGCTCGTGGCTTTCCCCAGAAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | TTGGGTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTaGGGAAAGCCACGAGCATGTAGTCATCCTGGCAGGCTGGAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: LGSGSPRHGRAFASF*GKPRACSHPGRLEE Trigger: CTCCTCCAGCCTGCCAGGATGACTACATGCTCGTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | CACTGGGACGGGCGGGCGGCCCACACAGACCACAGCCCTTGGTGCTaGTCTGGCCCTCTTTCTGCTTCTCTATGTTCCTCTTTTGAGACA | + |
|
Preference number: 1 (lower is better) Translates to: HWDGRAAHTDHSPWC*SGPLSASLCSSFET Trigger: TGTCTCAAAAGAGGAACATAGAGAAGCAGAAAGAGGGCCAGAGCAGCACCAAGGGCTGTGGTCTGTGTGGGCCGCCCGCCCGTCCCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | CCCATCCTGCTGCACAGCTCTTGCTTCAGTGGAATCCCACCATGCTaGCTCCCAGTCTGCTCTCTAGCCTTGCCTCTTTGGGCACTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: PILLHSSCFSGIPPC*LPVCSLALPLWALP Trigger: GGGAAGTGCCCAAAGAGGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTGTGCAGCAGGATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | GTCTCCTTCCAGCATGTGGGCCCAGGTGGCAGGCTTGGTGGCAGGTaGCCTCACATGCTGACCTATGGGATTTGCAGTCTTCTTGAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: VSFQHVGPGGRLGGR*PHMLTYGICSLLEA Trigger: AGCCTCAAGAAGACTGCAAATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGCCCACATGCTGGAAGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | GCTCCCATCCTGCTGCACAGCTCTTGCTTCAGTGGAATCCCACCATaGTGCCTCCCAGTCTGCTCTCTAGCCTTGCCTCTTTGGGCACTT | + |
|
Preference number: 1 (lower is better) Translates to: APILLHSSCFSGIPP*CLPVCSLALPLWAL Trigger: AAGTGCCCAAAGAGGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTGTGCAGCAGGATGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | GCCCACTCCAAACGGCTGGTCTACACGGGGTGGTCTACACTGCTGTaGTTGGGGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCTCATTT | + |
|
Preference number: 1 (lower is better) Translates to: AHSKRLVYTGWSTLL*LGAKLGFPRLQASF Trigger: AAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | GGTATTGCCAGGCATCCCAGGCTGGCCTCAAACTCTCAACCCTCCTaGCTCTGCCTCCCAAGTGCTGGGATCGTGGACATGTGCTATGAA | + |
|
Preference number: 1 (lower is better) Translates to: GIARHPRLASNSQPS*LCLPSAGIVDMCYE Trigger: TTCATAGCACATGTCCACGATCCCAGCACTTGGGAGGCAGAGGCAGGAGGGTTGAGAGTTTGAGGCCAGCCTGGGATGCCTGGCAATACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | AGAGGCCTTTCACAATTTGACTTTATGGGTCCAGCCAGAGTCGCCTaGAGGATGCCCCAAGCCCACGCTCCCATCCTGCTGCACAGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: RGLSQFDFMGPARVA*RMPQAHAPILLHSS Trigger: AGAGCTGTGCAGCAGGATGGGAGCGTGGGCTTGGGGCATCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTGAAAGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | AAGCTGCAACTCCCTTTGTGTCAATGGTGGCCCACTCCAAACGGCTaGTCTACACGGGGTGGTCTACACTGCTGTGCTTGGGGGCAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: KLQLPLCQWWPTPNG*STRGGLHCCAWGQS Trigger: GCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGTGGGCCACCATTGACACAAAGGGAGTTGCAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | GCCAATCCATGGCCTCAGAAGCTGCAACTCCCTTTGTGTCAATGGTaGCCCACTCCAAACGGCTGGTCTACACGGGGTGGTCTACACTGC | + |
|
Preference number: 1 (lower is better) Translates to: ANPWPQKLQLPLCQW*PTPNGWSTRGGLHC Trigger: GCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGTGGGCCACCATTGACACAAAGGGAGTTGCAGCTTCTGAGGCCATGGATTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | CAGTTTGTGAGCATCTGTTGTCTCCTTCCAGCATGTGGGCCCAGGTaGCAGGCTTGGTGGCAGGTGCCCTCACATGCTGACCTATGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: QFVSICCLLPACGPR*QAWWQVPSHADLWD Trigger: ATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGCCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | GTCACAGCCCATGTGTGGAAAGAGGCCTTTCACAATTTGACTTTATaGGTCCAGCCAGAGTCGCCTGGAGGATGCCCCAAGCCCACGCTC | + |
|
Preference number: 1 (lower is better) Translates to: VTAHVWKEAFHNLTL*VQPESPGGCPKPTL Trigger: GAGCGTGGGCTTGGGGCATCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTGAAAGGCCTCTTTCCACACATGGGCTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | ACTCCAAACGGCTGGTCTACACGGGGTGGTCTACACTGCTGTGCTTaGGGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCTCATTTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: TPNGWSTRGGLHCCA*GQSWASQDFKPHLF Trigger: GAACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | ATGCAGAGCGCCACCCTGCTCTCCCACGAAAGCCAGCACCAAGAATaGCTTGTTAGGTGGAACAGGCACAGTGCCAAGATTCTGGTCTTT | + |
|
Preference number: 1 (lower is better) Translates to: MQSATLLSHESQHQE*LVRWNRHSAKILVF Trigger: AAAGACCAGAATCTTGGCACTGTGCCTGTTCCACCTAACAAGGCATTCTTGGTGCTGGCTTTCGTGGGAGAGCAGGGTGGCGCTCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | CACAGCTCTTGCTTCAGTGGAATCCCACCATGCTGCCTCCCAGTCTaGTCTCTAGCCTTGCCTCTTTGGGCACTTCCCAAGCAAAATCAG | + |
|
Preference number: 1 (lower is better) Translates to: HSSCFSGIPPCCLPV*SLALPLWALPKQNQ Trigger: CTGATTTTGCTTGGGAAGTGCCCAAAGAGGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | GGCAGGCTTGGTGGCAGGTGCCCTCACATGCTGACCTATGGGATTTaGAGTCTTCTTGAGGCTCTCGACTCCTGGAACTTAGATTTGACC | + |
|
Preference number: 1 (lower is better) Translates to: GRLGGRCPHMLTYGI*SLLEALDSWNLDLT Trigger: GGTCAAATCTAAGTTCCAGGAGTCGAGAGCCTCAAGAAGACTGCAAATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | ATCCCACCATGCTGCCTCCCAGTCTGCTCTCTAGCCTTGCCTCTTTaGGCACTTCCCAAGCAAAATCAGTCACAGCGCTTTAATGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: IPPCCLPVCSLALPL*ALPKQNQSQRFNAW Trigger: CCAGGCATTAAAGCGCTGTGACTGATTTTGCTTGGGAAGTGCCCAAAGAGGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | TGGTCTACACGGGGTGGTCTACACTGCTGTGCTTGGGGGCAAAGCTaGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACTGCTTCACAC | + |
|
Preference number: 1 (lower is better) Translates to: WSTRGGLHCCAWGQS*ASQDFKPHLFTASH Trigger: GTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 90 bp | TGCTTTAAGTCACAGCCCATGTGTGGAAAGAGGCCTTTCACAATTTaGCTTTATGGGTCCAGCCAGAGTCGCCTGGAGGATGCCCCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: CFKSQPMCGKRPFTI*LYGSSQSRLEDAPS Trigger: GCTTGGGGCATCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTGAAAGGCCTCTTTCCACACATGGGCTGTGACTTAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | GGGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACTaGTTCACACGGACACACACACACACACACACACACACACACACA | + |
|
Preference number: 1 (lower is better) Translates to: GAKLGFPRLQASFVH*FTRTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 90 bp | AGAACCCGAGCTCCACAAAGCAGCGTGGCCATGAAGCTTCCCAGCTaGGAAAAGCAGAGAAACCAAGATGCTTGTGATCATCAGGACACA | + |
|
Preference number: 1 (lower is better) Translates to: RTRAPQSSVAMKLPS*EKQRNQDACDHQDT Trigger: TGTGTCCTGATGATCACAAGCATCTTGGTTTCTCTGCTTTTCTCAGCTGGGAAGCTTCATGGCCACGCTGCTTTGTGGAGCTCGGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 90 bp | TTGGTGCTGCTCTGGCCCTCTTTCTGCTTCTCTATGTTCCTCTTTTaGGACAAGCACCACCCACTCCATTGCCTTTCGAGTGAACCACTC | + |
|
Preference number: 1 (lower is better) Translates to: LVLLWPSFCFSMFLF*DKHHPLHCLSSEPL Trigger: GAGTGGTTCACTCGAAAGGCAATGGAGTGGGTGGTGCTTGTCTCAAAAGAGGAACATAGAGAAGCAGAAAGAGGGCCAGAGCAGCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | CAAGTGGTAACTACAACCAAGACAAACAGCATTTCCCACACAGGCTaGGAGAGCTGTAATGGCCACACCACATTATGCTGCTGGTCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: QVVTTTKTNSISHTG*ESCNGHTTLCCWSA Trigger: AGCAGACCAGCAGCATAATGTGGTGTGGCCATTACAGCTCTCCCAGCCTGTGTGGGAAATGCTGTTTGTCTTGGTTGTAGTTACCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | TCTGCACTGAGGACGAACACCTCTCAGAGCTTACTACTAAGCGAGTaGTTTAAGTCACAGCCCATGTGTGGAAAGAGGCCTTTCACAATT | + |
|
Preference number: 1 (lower is better) Translates to: SALRTNTSQSLLLSE*FKSQPMCGKRPFTI Trigger: AATTGTGAAAGGCCTCTTTCCACACATGGGCTGTGACTTAAAGCACTCGCTTAGTAGTAAGCTCTGAGAGGTGTTCGTCCTCAGTGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 90 bp | GAACCACTCGGTGGCTTGAATTCACCAAGAAGCCAACACAGCCTCTaGTTTAAAAACATTTCATGGCTGCCCATGGATGAAACATGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: EPLGGLNSPRSQHSL*FKNISWLPMDETCL Trigger: GAGGCATGTTTCATCCATGGGCAGCCATGAAATGTTTTTAAAGCAGAGGCTGTGTTGGCTTCTTGGTGAATTCAAGCCACCGAGTGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | CCAGTAGATCTAGAATGTTCCTCAAAGGCCAATGTGTTAAATGCTTaGTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGA | + |
|
Preference number: 1 (lower is better) Translates to: PVDLECSSKANVLNA*SPDKPFGRSSGLWG Trigger: TCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCAAGCATTTAACACATTGGCCTTTGAGGAACATTCTAGATCTACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| 3UTR GCA 90 bp | CACCAAGAAGCCAACACAGCCTCTGCTTTAAAAACATTTCATGGCTaGCCATGGATGAAACATGCCTCTAATCCTAGTACTTGGGAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: HQEANTASALKTFHG*PWMKHASNPSTWEA Trigger: TGCCTCCCAAGTACTAGGATTAGAGGCATGTTTCATCCATGGGCAGCCATGAAATGTTTTTAAAGCAGAGGCTGTGTTGGCTTCTTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | CTCCAACTGTCTTTTAAGCTTCAAAACTTTCATCTTGCCAATCCATaGCCTCAGAAGCTGCAACTCCCTTTGTGTCAATGGTGGCCCACT | + |
|
Preference number: 1 (lower is better) Translates to: LQLSFKLQNFHLANP*PQKLQLPLCQWWPT Trigger: AGTGGGCCACCATTGACACAAAGGGAGTTGCAGCTTCTGAGGCCATGGATTGGCAAGATGAAAGTTTTGAAGCTTAAAAGACAGTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 90 bp | AATGCTTGGTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTaGGGATGTGTCCAATATATCTTGTTCCTTATTTTACTCTCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: NAWSPDKPFGRSSGL*GCVQYILFLILLSP Trigger: GGGAGAGAGTAAAATAAGGAACAAGATATATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| 3UTR CCA 90 bp | CTCAAAGGCCAATGTGTTAAATGCTTGGTCACCAGACAAGCCTTTTaGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATATATCTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: LKGQCVKCLVTRQAF*EVFRSLGMCPIYLV Trigger: AACAAGATATATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCAAGCATTTAACACATTGGCCTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| 3UTR CCA 90 bp | GAAGCCAACACAGCCTCTGCTTTAAAAACATTTCATGGCTGCCCATaGATGAAACATGCCTCTAATCCTAGTACTTGGGAGGCAAAAGAA | + |
|
Preference number: 1 (lower is better) Translates to: EANTASALKTFHGCP*MKHASNPSTWEAKE Trigger: TTCTTTTGCCTCCCAAGTACTAGGATTAGAGGCATGTTTCATCCATGGGCAGCCATGAAATGTTTTTAAAGCAGAGGCTGTGTTGGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCCCAGGTGGCAGGCTTGGTGGCAGGTGCCCTCACATGCTGACCTATGGGATCGGGGTGGTCTACACTaGTGTGCTTGGGGGCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GPRWQAWWQVPSHADLWDRGGLH*CAWGQS Trigger: GCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCG...ATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACCTACACTGCTGTGCTTaGGGGCAAAGCTGGGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VLGAPGMAGHSPASGESHLHCCA*GQSWAS Trigger: GGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAG...GTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTTGGGTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGCCTGGAAAGGCACAGTaGGAGCAGTCACCTTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FLGFWEPQAWQGIRQLLGPGKAQ*EQSPSG Trigger: TCCAGAAGGTGACTGCTCGCACTGTGCCTTTCCAGG...CCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTGTTGTCTCCTTCCAGCATGTGGGCCCAGGTGGCAGGCTTGGTGGCAGGTGGTCTACACTGCTGTaGTTGGGGGCAAAGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ASVVSFQHVGPGGRLGGRWSTLL*LGAKLG Trigger: GCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCA...CCTGCCACCAAGCCTGCCACCTGGGCCCACATGCTGGAAGGAGACAACAGATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTTGGGTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGACCACATTATGCTGCTaGTCTGCTCTCCCCTCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FLGFWEPQAWQGIRQLLGTTLCC*SALPSA Trigger: AGCCGAGGGGAGAGCAGACCAGCAGCATAATGTGGT...CCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 90 bp | GCTGGTCTGCTCTCCCCTCGGCTTCTCCACCACAGCATCACTGCCTaGGGGCAGATGGTTAGCTGTGCCAGCCATCGGGACATCTATCAC | + |
|
Preference number: 2 (lower is better) Translates to: AGLLSPRLLHHSITA*GQMVSCASHRDIYH Trigger: GTGATAGATGTCCCGATGGCTGGCACAGCTAACCATCTGCCCCAAGGCAGTGATGCTGTGGTGGAGAAGCCGAGGGGAGAGCAGACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCCCAGGTGGCAGGCTTGGTGGCAGGTGCCCTCACATGCTGACCTATGGGATGAGCCACTGTGTGAGTaGGTGTTAGGGATCAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: GPRWQAWWQVPSHADLWDEPLCE*VLGIKP Trigger: AGGTTTGATCCCTAACACTCACTCACACAGTGGCTC...ATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCCCAGGTGGCAGGCTTGGTGGCAGGTGCCCTCACATGCTGACCTATGGGATAGCCAGCACCAAGAATaGCTTGTTAGGTGGAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: GPRWQAWWQVPSHADLWDSQHQE*LVRWNR Trigger: CCTGTTCCACCTAACAAGGCATTCTTGGTGCTGGCT...ATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTGTTGTCTCCTTCCAGCATGTGGGCCCAGGTGGCAGGCTTGGTGGCAGGCTGCTGCACAGCTCTTaGTTCAGTGGAATCCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: ASVVSFQHVGPGGRLGGRLLHSS*FSGIPP Trigger: TGGTGGGATTCCACTGAAGCAAGAGCTGTGCAGCAG...CCTGCCACCAAGCCTGCCACCTGGGCCCACATGCTGGAAGGAGACAACAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCACTCCAAACGGCTGGTCTACACGGGGTGGTCTACACTGCTGTGCTTGGGATTTCCCACACAGGCTaGGAGAGCTGTAATGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GPLQTAGLHGVVYTAVLGISHTG*ESCNGH Trigger: GTGGCCATTACAGCTCTCCCAGCCTGTGTGGGAAAT...CCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 90 bp | ACGCAGTGCACATGCAGAGGTCAGAGGACAGTTTGTGAGCATCTGTaGTCTCCTTCCAGCATGTGGGCCCAGGTGGCAGGCTTGGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TQCTCRGQRTVCEHL*SPSSMWAQVAGLVA Trigger: TGCCACCAAGCCTGCCACCTGGGCCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGCATGTGCACTGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACGCCTCATTTGTTCACTaGTTCACACGGACACACACA | + |
|
Preference number: 2 (lower is better) Translates to: VLGAPGMAGHSPASGESHASFVH*FTRTHT Trigger: TGTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGC...GTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACGAGCATGTAGTCATGACCACAGCCCTTGGTaGTGCTCTGGCCCTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RHGRAFASFWGKPRACSHDHSPW*CSGPLS Trigger: AGAAAGAGGGCCAGAGCAGCACCAAGGGCTGTGGTC...ATGACTACATGCTCGTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACCACAATTTGACTTTATaGGTCCAGCCAGAGTCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VLGAPGMAGHSPASGESHHNLTL*VQPESP Trigger: AGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTG...GTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTGTTGTCTCCTTCCAGCATGTGGGCCCAGGTGGCAGGCTTGGTGGCAGGCATCTTGCCAATCCATaGCCTCAGAAGCTGCAACTC | + |
|
Preference number: 2 (lower is better) Translates to: ASVVSFQHVGPGGRLGGRHLANP*PQKLQL Trigger: GAGTTGCAGCTTCTGAGGCCATGGATTGGCAAGATG...CCTGCCACCAAGCCTGCCACCTGGGCCCACATGCTGGAAGGAGACAACAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACGAGCATGTAGTCATGAACTCCTGTTGAATTaGGCCGGCCCCAAGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: RHGRAFASFWGKPRACSHELLLN*AGPKDA Trigger: AGCATCCTTGGGGCCGGCTCAATTCAACAGGAGTTC...ATGACTACATGCTCGTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACGAGCATGTAGTCATAGGCTTGGTGGCAGGTaGCCTCACATGCTGACCTAT | + |
|
Preference number: 2 (lower is better) Translates to: RHGRAFASFWGKPRACSHRLGGR*PHMLTY Trigger: ATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCT...ATGACTACATGCTCGTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAGGTCAGAGGACAGTTTGTGAGCATCTGTTGTCTCCTTCCAGCATGTGGGAGGTGGCAGGCTTGGTaGCAGGTGCCCTCACATGCT | + |
|
Preference number: 2 (lower is better) Translates to: AEVRGQFVSICCLLPACGRWQAW*QVPSHA Trigger: AGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCT...CCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 90 bp | CACTCCAAACGGCTGGTCTACACGGGGTGGTCTACACTGCTGTGCTaGGGGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCTCATTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HSKRLVYTGWSTLLC*GAKLGFPRLQASFV Trigger: AACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACTGCTTCACACGGACACACACGCCACGCAGAGCCAATaGCAGCTATCCAGCCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLPKTSSLICSLLHTDTHATQSQ*QLSSHR Trigger: CCTGTGGCTGGATAGCTGGCATTGGCTCTGCGTGGC...GTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAGGTCAGAGGACAGTTTGTGAGCATCTGTTGTCTCCTTCCAGCATGTGGGGCCAAAGCCAAGAGCTaGTGTCATCGGAGGCTACCG | + |
|
Preference number: 2 (lower is better) Translates to: AEVRGQFVSICCLLPACGAKAKS*CHRRLP Trigger: CGGTAGCCTCCGATGACACCAGCTCTTGGCTTTGGC...CCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACGAGCATGTAGTCATCTCAGAGCACATCCCTaGGATGCCTCAAAGCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RHGRAFASFWGKPRACSHLRAHP*DASKLQ Trigger: TTGCAGCTTTGAGGCATCCCAGGGATGTGCTCTGAG...ATGACTACATGCTCGTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACTGCTTCACACGGACACACACCCCACGCTCCCATCCTaGTGCACAGCTCTTGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GLPKTSSLICSLLHTDTHPTLPS*CTALAS Trigger: TGAAGCAAGAGCTGTGCAGCAGGATGGGAGCGTGGG...GTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTTGGGTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAGCCAACACAGCCTCTaGTTTAAAAACATTTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: FLGFWEPQAWQGIRQLLGSQHSL*FKNISW Trigger: CCATGAAATGTTTTTAAAGCAGAGGCTGTGTTGGCT...CCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 90 bp | TTCAGTGGAATCCCACCATGCTGCCTCCCAGTCTGCTCTCTAGCCTaGCCTCTTTGGGCACTTCCCAAGCAAAATCAGTCACAGCGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FSGIPPCCLPVCSLA*PLWALPKQNQSQRF Trigger: AAAGCGCTGTGACTGATTTTGCTTGGGAAGTGCCCAAAGAGGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACATGTTCAAAGATTTATaGAAATTAGCCAGGCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VLGAPGMAGHSPASGESHMFKDL*KLARRG Trigger: ACCACGCCTGGCTAATTTCCATAAATCTTTGAACAT...GTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACTGCTTCACACGGACACACACAGGCCTTTCACAATTTaGCTTTATGGGTCCAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GLPKTSSLICSLLHTDTHRPFTI*LYGSSQ Trigger: CTGGCTGGACCCATAAAGTCAAATTGTGAAAGGCCT...GTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTGCAACTCCCTTTGTGTCAATGGTGGCCCACTCCAAACGGCTGGTCTACAGTGGAACAGGCACAGTaGCAAGATTCTGGTCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: KLQLPLCQWWPTPNGWSTVEQAQ*QDSGLY Trigger: ATAAAGACCAGAATCTTGGCACTGTGCCTGTTCCAC...TGTAGACCAGCCGTTTGGAGTGGGCCACCATTGACACAAAGGGAGTTGCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACACTTCAAGCACAAAGTAAAACTGCACCTGTACAGTaGCTGGACAGAGCCACTCAC | + |
|
Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTLQAQSKTAPVQ*LDRATH Trigger: GTGAGTGGCTCTGTCCAGGCACTGTACAGGTGCAGT...TTTACTTTGTGCTTGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACTTCAAGCACAAAGTAAACAGCTCTTGCTTCAGTaGAATCCCACCATGCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTLQAQSKQLLLQ*NPTMLP Trigger: AGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTG...TTTACTTTGTGCTTGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | CTACTAAGCGAGTGCTTTAAGTCACAGCCCATGTGTGGAAAGAGGCCTTTCACAATTCATCTGAAAACCTaGCTGGAAATGCACACACGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSECFKSQPMCGKRPFTIHLKT*LEMHTR Trigger: CCGTGTGTGCATTTCCAGGCAGGTTTTCAGATGAAT...TGTGAAAGGCCTCTTTCCACACATGGGCTGTGACTTAAAGCACTCGCTTAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTAGCCGGCCCCAAGGATaGTTGCAGTTCTCTGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: WLLTAELFLRTSQRILRISRPQG*LQFSDH Trigger: GTGATCAGAGAACTGCAAGCATCCTTGGGGCCGGCT...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACACTTCAAGCACAAAGTAAACAGGCCCATTTTCTGTaGATTCATCTGAAAACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTLQAQSKQAHFL*IHLKTC Trigger: GCAGGTTTTCAGATGAATGCACAGAAAATGGGCCTG...TTTACTTTGTGCTTGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCTTGTTTAAAGAGCAAATCCCAAGATATGTCACAACGCTATCAACACATACTGCCTTGGGGCAGATaGTTAGCTGTGCCAGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: IPCLKSKSQDMSQRYQHILPWGR*LAVPAI Trigger: GATGGCTGGCACAGCTAACCATCTGCCCCAAGGCAG...TATGTGTTGATAGCGTTGTGACATATCTTGGGATTTGCTCTTTAAACAAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCTATTCCTTGTTTAAAGAGCAAATCCCAAGATATGTCACAACGCTATCAACAGAAGTCTTCACCTACTaGACAGGGACTCAAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PYSLFKEQIPRYVTTLSTEVFTY*TGTQGK Trigger: CTTCCCTTGAGTCCCTGTGCAGTAGGTGAAGACTTC...TGTTGATAGCGTTGTGACATATCTTGGGATTTGCTCTTTAAACAAGGAATAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTAAAGACCCAAACACTCCCCCATGCAATCATTAACTTAAGTAAAACAGAACACCTGTACAGTGCCTaGACAGAGCCACTCACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TLKTQTLPHAIINLSKTEHLYSA*TEPLTF Trigger: GAAAGTGAGTGGCTCTGTCCAGGCACTGTACAGGTG...TTCTGTTTTACTTAAGTTAATGATTGCATGGGGGAGTGTTTGGGTCTTTAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTGTCACAGCCCATGTGTaGAAAGAGGCCTTTCACAAT | + |
|
Preference number: 2 (lower is better) Translates to: WLLTAELFLRTSQRILRIVTAHV*KEAFHN Trigger: ATTGTGAAAGGCCTCTTTCCACACATGGGCTGTGAC...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTATTCCTTGTTTAAAGAGCAAATCCCAAGATATGTCACAACGCTATCAACATTGCAGTTTGTCTTATaGAGACTGACAGTGGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: PYSLFKEQIPRYVTTLSTLQFVL*RLTVGY Trigger: ATACCCCACTGTCAGTCTTCATAAGACAAACTGCAA...TGTTGATAGCGTTGTGACATATCTTGGGATTTGCTCTTTAAACAAGGAATAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCTTGTTTAAAGAGCAAATCCCAAGATATGTCACAACGCTATCAACACATAATCATCAGGACACAGTaGGCAAAGGCAACACAGATT | + |
|
Preference number: 2 (lower is better) Translates to: IPCLKSKSQDMSQRYQHIIIRTQ*AKATQI Trigger: AATCTGTGTTGCCTTTGCTCACTGTGTCCTGATGAT...TATGTGTTGATAGCGTTGTGACATATCTTGGGATTTGCTCTTTAAACAAGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTAAAACCTCAAATGAATaGCCATGGAGCAAACTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: WLLTAELFLRTSQRILRIKTSNE*PWSKLK Trigger: CTTAAGTTTGCTCCATGGTCATTCATTTGAGGTTTT...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACGCCCAGGTGGCAGGCTaGGTGGCAGGTGCCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLGAPGMAGHSPASGESHAQVAG*VAGALT Trigger: TGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGC...GTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | GACGGGCGGGCGGCCCACACAGACCACAGCCCTTGGTaGTGCTCTGGCCCTCTTTCTGCTTCTCTATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: DGRAAHTDHSPW*CSGPLSASLCS Trigger: GGAACATAGAGAAGCAGAAAGAGGGCCAGAGCAGCACCAAGGGCTGTGGTCTGTGTGGGCCGCCCGCCCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | GGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTaGGGAAAGCCACGAGCATGTAGTCATCCTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSPRHGRAFASF*GKPRACSHPGR Trigger: CCTGCCAGGATGACTACATGCTCGTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CTGCCTGGAAATGCACACACGGCCACGCAGAGCCAATaGCAGCTATCCAGCCACAGGGAACCACCTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPGNAHTATQSQ*QLSSHREPPQS Trigger: GCTCTGAGGTGGTTCCCTGTGGCTGGATAGCTGGCATTGGCTCTGCGTGGCCGTGTGTGCATTTCCAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | TTGACTTTATGGGTCCAGCCAGAGTCGCCTGGAGGATaGCCCAAGCCCACGCTCCCATCCTGCTGCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTLWVQPESPGG*PKPTLPSCCTA Trigger: AGCTGTGCAGCAGGATGGGAGCGTGGGCTTGGGGCATCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | AGGCATCCCAGGCTGGCCTCAAACTCTCAACCCTCCTaGCTCTGCCTCCCAAGTGCTGGGATCGTGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: RHPRLASNSQPS*LCLPSAGIVDM Trigger: CATGTCCACGATCCCAGCACTTGGGAGGCAGAGGCAGGAGGGTTGAGAGTTTGAGGCCAGCCTGGGATGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CTCCTTCCAGCATGTGGGCCCAGGTGGCAGGCTTGGTaGCAGGTGCCCTCACATGCTGACCTATGGGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLPACGPRWQAW*QVPSHADLWDL Trigger: CAAATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGCCCACATGCTGGAAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | TACACTTCCTTCCTTGGGTTCTGGGAGCCCCAGGCATaGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: YTSFLGFWEPQA*QGIRQLLGKAT Trigger: CGTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAAGGAAGTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTGGGTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGGGATTTGCAGTCTTCTaGAGGCTCTCGACTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FLGFWEPQAWQGIRQLLGGFAVF*RLSTPG Trigger: TCCAGGAGTCGAGAGCCTCAAGAAGACTGCAAATCC...CCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | GGCTGGGAGAGCTGTAATGGCCACACCACATTATGCTaGTGGTCTGCTCTCCCCTCGGCTTCTCCACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GWESCNGHTTLC*WSALPSASPPQ Trigger: CTGTGGTGGAGAAGCCGAGGGGAGAGCAGACCAGCAGCATAATGTGGTGTGGCCATTACAGCTCTCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | ACTCCAAACGGCTGGTCTACACGGGGTGGTCTACACTaGTGTGCTTGGGGGCAAAGCTGGGCTTCCCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TPNGWSTRGGLH*CAWGQSWASQD Trigger: GTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CAGCATGTGGGCCCAGGTGGCAGGCTTGGTGGCAGGTaGCCTCACATGCTGACCTATGGGATTTGCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QHVGPGGRLGGR*PHMLTYGICSL Trigger: AAGACTGCAAATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTGGGCCCACATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CCCAGGCTGGCCTCAAACTCTCAACCCTCCTGCCTCTaGCTCCCAAGTGCTGGGATCGTGGACATGTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PRLASNSQPSCL*LPSAGIVDMCY Trigger: ATAGCACATGTCCACGATCCCAGCACTTGGGAGGCAGAGGCAGGAGGGTTGAGAGTTTGAGGCCAGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CCACGCTCCCATCCTGCTGCACAGCTCTTGCTTCAGTaGAATCCCACCATGCTGCCTCCCAGTCTGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PRSHPAAQLLLQ*NPTMLPPSLLS Trigger: AGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTGTGCAGCAGGATGGGAGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | GGCTGGTCTACACGGGGTGGTCTACACTGCTGTGCTTaGGGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GWSTRGGLHCCA*GQSWASQDFKP Trigger: AGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | CAGGTGGCAGGCTTGGTGGCAGGTGCCCTCACATGCTaGCCTATGGGATTTGCAGTCTTCTTGAGGCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: QVAGLVAGALTC*PMGFAVFLRLS Trigger: CGAGAGCCTCAAGAAGACTGCAAATCCCATAGGTCAGCATGTGAGGGCACCTGCCACCAAGCCTGCCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | AACCCCTCAGAGCACATCCCTGGGATGCCTCAAAGCTaGAAGGCAGCCAAAGCCAAGAGCTGGTGTCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: NPSEHIPGMPQS*KAAKAKSWCHR Trigger: CCGATGACACCAGCTCTTGGCTTTGGCTGCCTTGCAGCTTTGAGGCATCCCAGGGATGTGCTCTGAGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CAGCAGCAGGAGACTGAGCCGGGAAGTCAAACAGCCTaGTCCTGTACCAACCACACTCATCCCATCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QQQETEPGSQTA*SCTNHTHPIPG Trigger: TCCAGGGATGGGATGAGTGTGGTTGGTACAGGAGCAGGCTGTTTGACTTCCCGGCTCAGTCTCCTGCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | GTGTCATCGGAGGCTACCGACAGGTCTGTGCAGGACTaGGAAGTCTTCACCTACTGCACAGGGACTCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSEATDRSVQD*EVFTYCTGTQG Trigger: CCCTTGAGTCCCTGTGCAGTAGGTGAAGACTTCCCAGTCCTGCACAGACCTGTCGGTAGCCTCCGATGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | ATGCCTCAAAGCTGCAAGGCAGCCAAAGCCAAGAGCTaGTGTCATCGGAGGCTACCGACAGGTCTGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MPQSCKAAKAKS*CHRRLPTGLCR Trigger: CCTGCACAGACCTGTCGGTAGCCTCCGATGACACCAGCTCTTGGCTTTGGCTGCCTTGCAGCTTTGAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | TCACAATTTGACTTTATGGGTCCAGCCAGAGTCGCCTaGAGGATGCCCCAAGCCCACGCTCCCATCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQFDFMGPARVA*RMPQAHAPILL Trigger: CAGCAGGATGGGAGCGTGGGCTTGGGGCATCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CTCCCTTTGTGTCAATGGTGGCCCACTCCAAACGGCTaGTCTACACGGGGTGGTCTACACTGCTGTGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPLCQWWPTPNG*STRGGLHCCAW Trigger: CCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTTGGAGTGGGCCACCATTGACACAAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CCATGGCCTCAGAAGCTGCAACTCCCTTTGTGTCAATaGTGGCCCACTCCAAACGGCTGGTCTACACGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PWPQKLQLPLCQ*WPTPNGWSTRG Trigger: ACCCCGTGTAGACCAGCCGTTTGGAGTGGGCCACCATTGACACAAAGGGAGTTGCAGCTTCTGAGGCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | TCGCACATTGGTTTCAGGGTGAGAGCTAGCTCACGCTaGAATGCAGAGCGCCACCCTGCTCTCCCACGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHIGFRVRASSR*NAERHPALPRK Trigger: CTTTCGTGGGAGAGCAGGGTGGCGCTCTGCATTTCAGCGTGAGCTAGCTCTCACCCTGAAACCAATGTGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | GCACTCAGCCGTATTCCAGGATTCACAGCAGCGCACTaGACCTGTACAGTGCCTGGACAGAGCCACTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: ALSRIPGFTAAH*TCTVPGQSHSL Trigger: AAGTGAGTGGCTCTGTCCAGGCACTGTACAGGTGCAGTGCGCTGCTGTGAATCCTGGAATACGGCTGAGTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CTGCACAGCTCTTGCTTCAGTGGAATCCCACCATGCTaGCTCCCAGTCTGCTCTCTAGCCTTGCCTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHSSCFSGIPPC*LPVCSLALPLW Trigger: CCAAAGAGGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CTGCTGCACAGCTCTTGCTTCAGTGGAATCCCACCATaGTGCCTCCCAGTCTGCTCTCTAGCCTTGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLHSSCFSGIPP*CLPVCSLALPL Trigger: AAGAGGCAAGGCTAGAGAGCAGACTGGGAGGCAGCATGGTGGGATTCCACTGAAGCAAGAGCTGTGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | AAACGGCTGGTCTACACGGGGTGGTCTACACTGCTGTaGTTGGGGGCAAAGCTGGGCTTCCCAAGACTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KRLVYTGWSTLL*LGAKLGFPRLQ Trigger: TTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCGTGTAGACCAGCCGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | GGGATGAAGGGGCCAGCACTCGTGACGCAGTGCACATaGAGAGGTCAGAGGACAGTTTGTGAGCATCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GMKGPALVTQCT*RGQRTVCEHLL Trigger: CAACAGATGCTCACAAACTGTCCTCTGACCTCTGCATGTGCACTGCGTCACGAGTGCTGGCCCCTTCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | GGCTTCTCCACCACAGCATCACTGCCTTGGGGCAGATaGTTAGCTGTGCCAGCCATCGGGACATCTATCACT | + |
|
Preference number: 3 (lower is better) Translates to: GFSTTASLPWGR*LAVPAIGTSIT Trigger: AGTGATAGATGTCCCGATGGCTGGCACAGCTAACCATCTGCCCCAAGGCAGTGATGCTGTGGTGGAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | TGGGAGAGCTGTAATGGCCACACCACATTATGCTGCTaGTCTGCTCTCCCCTCGGCTTCTCCACCACAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: WESCNGHTTLCC*SALPSASPPQH Trigger: ATGCTGTGGTGGAGAAGCCGAGGGGAGAGCAGACCAGCAGCATAATGTGGTGTGGCCATTACAGCTCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGACTGAGCCGGGAAGTCAAACAGCCTGCTCCTGTACCAACCACACTCATCCGGCCCCAAGGATGCTaGCAGTTCTCTGATCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: RRLSREVKQPAPVPTTLIRPQGC*QFSDHL Trigger: TAGGTGATCAGAGAACTGCAAGCATCCTTGGGGCCG...GATGAGTGTGGTTGGTACAGGAGCAGGCTGTTTGACTTCCCGGCTCAGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGGTCAGAGGACAGTTTGTGAGCATCTGTTGTCTCCTTCCAGCATGTGGGTCTACACTGCTGTGCTaGGGGGCAAAGCTGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: AEVRGQFVSICCLLPACGSTLLC*GAKLGF Trigger: GAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGA...CCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGAAAGCCACTTCAAAACTTTCATCTaGCCAATCCATGGCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLGAPGMAGHSPASGESHFKTFI*PIHGLR Trigger: TCTGAGGCCATGGATTGGCAAGATGAAAGTTTTGAA...GTGGCTTTCCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | CCTGCTGGGAAGAGAACCCCCATGAAGAACTCCTGTTaGATTGAGCCGGCCCCAAGGATGCTTGCAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PAGKRTPMKNSC*IEPAPRMLAVL Trigger: GAGAACTGCAAGCATCCTTGGGGCCGGCTCAATTCAACAGGAGTTCTTCATGGGGGTTCTCTTCCCAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | GACGCAGTGCACATGCAGAGGTCAGAGGACAGTTTGTaGGCATCTGTTGTCTCCTTCCAGCATGTGGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DAVHMQRSEDSL*ASVVSFQHVGP Trigger: TGGGCCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGCATGTGCACTGCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CGGGGTGGTCTACACTGCTGTGCTTGGGGGCAAAGCTaGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: RGGLHCCAWGQS*ASQDFKPHLFT Trigger: AGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGTGTAGACCACCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | ACAATTACCACAGGCCTGCTGGGAAGAGAACCCCCATaGAGAACTCCTGTTGAATTGAGCCGGCCCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TITTGLLGREPP*RTPVELSRPQG Trigger: TCCTTGGGGCCGGCTCAATTCAACAGGAGTTCTTCATGGGGGTTCTCTTCCCAGCAGGCCTGTGGTAATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | GGTGGCAGGTGCCCTCACATGCTGACCTATGGGATTTaGAGTCTTCTTGAGGCTCTCGACTCCTGGAACTTA | + |
|
Preference number: 3 (lower is better) Translates to: GGRCPHMLTYGI*SLLEALDSWNL Trigger: TAAGTTCCAGGAGTCGAGAGCCTCAAGAAGACTGCAAATCCCATAGGTCAGCATGTGAGGGCACCTGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | ATTTGCAAGCATGATTACACTTCCTTCCTTGGGTTCTaGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ICKHDYTSFLGF*EPQAWQGIRQL Trigger: AAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAAGGAAGTGTAATCATGCTTGCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | TGGGAAGAGAACCCCCATGAAGAACTCCTGTTGAATTaGGCCGGCCCCAAGGATGCTTGCAGTTCTCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: WEENPHEELLLN*AGPKDACSSLI Trigger: GATCAGAGAACTGCAAGCATCCTTGGGGCCGGCTCAATTCAACAGGAGTTCTTCATGGGGGTTCTCTTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CATGTGTGGAAAGAGGCCTTTCACAATTTGACTTTATaGGTCCAGCCAGAGTCGCCTGGAGGATGCCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HVWKEAFHNLTL*VQPESPGGCPK Trigger: CTTGGGGCATCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTGAAAGGCCTCTTTCCACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGGTCAGAGGACAGTTTGTGAGCATCTGTTGTCTCCTTCCAGCATGTGGGTCTAGCCTTGCCTCTTaGGGCACTTCCCAAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AEVRGQFVSICCLLPACGSSLAS*GTSQAK Trigger: TTTTGCTTGGGAAGTGCCCAAAGAGGCAAGGCTAGA...CCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | TCACAGCCCATGTGTGGAAAGAGGCCTTTCACAATTTaGCTTTATGGGTCCAGCCAGAGTCGCCTGGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SQPMCGKRPFTI*LYGSSQSRLED Trigger: ATCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTGAAAGGCCTCTTTCCACACATGGGCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | ACTGGAGTTCCGGAGAATTGTGAGCCACTGTGTGAGTaGGTGTTAGGGATCAAACCTGGGTTCCCCACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGVPENCEPLCE*VLGIKPGFPTN Trigger: ATTGGTGGGGAACCCAGGTTTGATCCCTAACACTCACTCACACAGTGGCTCACAATTCTCCGGAACTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CTGGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACTaGTTCACACGGACACACACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LGFPRLQASFVH*FTRTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCTGTGCTTGGGGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCTCATTTGTACTGTGACCCAAATGTaGACAACACTGACTTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TAVLGGKAGLPKTSSLICTVTQM*TTLTFS Trigger: GCTGAAAGTCAGTGTTGTCAACATTTGGGTCACAGT...ACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACTTCAAGCACAAAGTAAAGTCTGCTCTCTAGCCTaGCCTCTTTGGGCACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTHTLQAQSKVCSLA*PLWALP Trigger: GGGAAGTGCCCAAAGAGGCAAGGCTAGAGAGCAGAC...TTTACTTTGTGCTTGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | AAACTTAAGGCCAGGCCCATTTTCTGTGCATTCATCTaGAAACCTGCCTGGAAATGCACACACGGCCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: KLKARPIFCAFI*KPAWKCTHGHA Trigger: TGCGTGGCCGTGTGTGCATTTCCAGGCAGGTTTTCAGATGAATGCACAGAAAATGGGCCTGGCCTTAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | AGGACGAACACCTCTCAGAGCTTACTACTAAGCGAGTaGTTTAAGTCACAGCCCATGTGTGGAAAGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTNTSQSLLLSE*FKSQPMCGKRP Trigger: AGGCCTCTTTCCACACATGGGCTGTGACTTAAAGCACTCGCTTAGTAGTAAGCTCTGAGAGGTGTTCGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | TGCCTCTGCCTCCCAAGTGCTGGGATCGTGGACATGTaGTATGAAGCCTGTCTCCTTAATCATCTACCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLCLPSAGIVDM*YEACLLNHLPF Trigger: AAAAGGTAGATGATTAAGGAGACAGGCTTCATAGCACATGTCCACGATCCCAGCACTTGGGAGGCAGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | ACTACAACCAAGACAAACAGCATTTCCCACACAGGCTaGGAGAGCTGTAATGGCCACACCACATTATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TTTKTNSISHTG*ESCNGHTTLCC Trigger: GCAGCATAATGTGGTGTGGCCATTACAGCTCTCCCAGCCTGTGTGGGAAATGCTGTTTGTCTTGGTTGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | TGTTACTATAAAAGCCTCACACAGTTGTTAGTGTGCTaGAGCAGTTCTTGGGCCATCCTGAGTCTGTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CYYKSLTQLLVC*SSSWAILSLCS Trigger: GGAACACAGACTCAGGATGGCCCAAGAACTGCTCCAGCACACTAACAACTGTGTGAGGCTTTTATAGTAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CAATGTGTTAAATGCTTGGTCACCAGACAAGCCTTTTaGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATA | + |
|
Preference number: 3 (lower is better) Translates to: QCVKCLVTRQAF*EVFRSLGMCPI Trigger: TATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCAAGCATTTAACACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTCACAGCATCACTGCCTaGGGGCAGATGGTTAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WLLTAELFLRTSQRILRIHSITA*GQMVSC Trigger: ACAGCTAACCATCTGCCCCAAGGCAGTGATGCTGTG...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR TCA 72 bp | TCAAACCTGGGTTCCCCACCAATGGCTCTTAACTGCTaGGCTGTTTCTCAGGACCTCACAAAGAATTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SNLGSPPMALNC*AVSQDLTKNFK Trigger: CTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCATTGGTGGGGAACCCAGGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | CTGACTCTTCAGTTCCTGGCTAATTCCCCACCTCTTTaGCTCTCAATAGGACTGTCCAGATTCTTCATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTLQFLANSPPL*LSIGLSRFFIE Trigger: TTCAATGAAGAATCTGGACAGTCCTATTGAGAGGCAAAGAGGTGGGGAATTAGCCAGGAACTGAAGAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | TTCTGTTACTATAAAAGCCTCACACAGTTGTTAGTGTaGTGGAGCAGTTCTTGGGCCATCCTGAGTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FCYYKSLTQLLV*WSSSWAILSLC Trigger: ACACAGACTCAGGATGGCCCAAGAACTGCTCCAGCACACTAACAACTGTGTGAGGCTTTTATAGTAACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | CTAGAATGTTCCTCAAAGGCCAATGTGTTAAATGCTTaGTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LECSSKANVLNA*SPDKPFGRSSG Trigger: ACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCAAGCATTTAACACATTGGCCTTTGAGGAACATTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| 3UTR TCA 72 bp | TTAAAGGTGTGTATGGGTCTTTTGACTGTATGTCCGTaGACCACATGTGTGCAGTACCCAAGAAAGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKVCMGLLTVCP*TTCVQYPRKPE Trigger: TTCTGGCTTTCTTGGGTACTGCACACATGTGGTTCACGGACATACAGTCAAAAGACCCATACACACCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR GCA 72 bp | GCCAACACAGCCTCTGCTTTAAAAACATTTCATGGCTaGCCATGGATGAAACATGCCTCTAATCCTAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: ANTASALKTFHG*PWMKHASNPST Trigger: AGTACTAGGATTAGAGGCATGTTTCATCCATGGGCAGCCATGAAATGTTTTTAAAGCAGAGGCTGTGTTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | ACAGCCTCTGCTTTAAAAACATTTCATGGCTGCCCATaGATGAAACATGCCTCTAATCCTAGTACTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TASALKTFHGCP*MKHASNPSTWE Trigger: CTCCCAAGTACTAGGATTAGAGGCATGTTTCATCCATGGGCAGCCATGAAATGTTTTTAAAGCAGAGGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CCA 72 bp | TATGGGATTTGCAGTCTTCTTGAGGCTCTCGACTCCTaGAACTTAGATTTGACCTTTTGTTTAAATTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YGICSLLEALDS*NLDLTFCLNFA Trigger: AGCAAAATTTAAACAAAAGGTCAAATCTAAGTTCCAGGAGTCGAGAGCCTCAAGAAGACTGCAAATCCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAAGAGAGTCTGCTGCCGTaGCCTGAGGGTCTGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WSPDKPFGRSSGLWGCVQESLLP*PEGLRR Trigger: CCGCCTCAGACCCTCAGGCCACGGCAGCAGACTCTC...TTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCACTCAAATGTCCACTGTaGGTCCCGCAGCGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVTRQAFWEVFRSLGMCPLKCPL*VPQREL Trigger: GAGCTCGCGCTGCGGGACGCACAGTGGACATTTGAG...TGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTGGGTTCTGGGAGCCCCAGGCATGGCAGGGCATTCGCCAGCTTCTGGGGCGCATCTTTAAGACCTaGGAAAAGCCTTCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLGFWEPQAWQGIRQLLGRIFKT*EKPSPC Trigger: ACAAGGAGAAGGCTTTTCCCAGGTCTTAAAGATGCG...CCCCAGAAGCTGGCGAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 72 bp | ACATGCAGAGGTCAGAGGACAGTTTGTGAGCATCTGTaGTCTCCTTCCAGCATGTGGGCCCAGGTGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCRGQRTVCEHL*SPSSMWAQVAG Trigger: GCCTGCCACCTGGGCCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCACACAGGCTCAGCTGTTaGCCTGGGTCAGGGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LVTRQAFWEVFRSLGMCPHRLSC*PGSGSH Trigger: ATGTGACCCTGACCCAGGTCAACAGCTGAGCCTGTG...TGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| 3UTR CAA 72 bp | GGGAACCTATTTGCAAGCATGATTACACTTCCTTCCTaGGGTTCTGGGAGCCCCAGGCATGGCAGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GNLFASMITLPS*GSGSPRHGRAF Trigger: GAATGCCCTGCCATGCCTGGGGCTCCCAGAACCCAAGGAAGGAAGTGTAATCATGCTTGCAAATAGGTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 72 bp | GTCACAGCCCATGTGTGGAAAGAGGCCTTTCACAATTaGACTTTATGGGTCCAGCCAGAGTCGCCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTAHVWKEAFHN*TLWVQPESPGG Trigger: TCCTCCAGGCGACTCTGGCTGGACCCATAAAGTCAAATTGTGAAAGGCCTCTTTCCACACATGGGCTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 72 bp | AGAACTCCTGTTGAATTGAGCCGGCCCCAAGGATGCTaGCAGTTCTCTGATCACCTAGCTTCTGCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTPVELSRPQGC*QFSDHLASALR Trigger: CCTCAGTGCAGAAGCTAGGTGATCAGAGAACTGCAAGCATCCTTGGGGCCGGCTCAATTCAACAGGAGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 72 bp | GGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCTCATTaGTTCACTGCTTCACACGGACACACACACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GQSWASQDFKPH*FTASHGHTHTH Trigger: GTGTGTGTGTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGTGCTTGGGGGCAAAGCTGGGCTTCCCAAGACTTCAAGCCTCATTTGTAAGCTGACGTTCTCCTaGACAGCCGACTCAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVLGGKAGLPKTSSLICKLTFS*TADSNV Trigger: GACATTTGAGTCGGCTGTGCAGGAGAACGTCAGCTT...ACAAATGAGGCTTGAAGTCTTGGGAAGCCCAGCTTTGCCCCCAAGCACAGCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATATCTCAAGGATCCTTCTaGGATACTGCCTCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRQAFWEVFRSLGMCPISQGSF*DTASVW Trigger: CCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAGA...TATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS-3UTR TCA 90 bp | GACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATATATCTTGGGATGTACAACAGGGTaGTACTGCTTCAGACTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DKPFGRSSGLWGCVQYILGCTTG*YCFRLA Trigger: CGCGAGTCTGAAGCAGTATCACCCTGTTGTACATCC...CAAGATATATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTGAGAGTCTGCTGCCGTaGCCTGAGGGTCTGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLTAELFLRTSQRILRIESLLP*PEGLRR Trigger: CCGCCTCAGACCCTCAGGCCACGGCAGCAGACTCTC...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCCCAAGACTTCAAGCCTCATTTGTTCACTGCTTCACACGGACACACACTTCTACACGAGAAGCTaGGTCAGGGTCACATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLPKTSSLICSLLHTDTHFYTRS*VRVTFQ Trigger: CTGAAATGTGACCCTGACCCAGCTTCTCGTGTAGAA...GTGTGTGTCCGTGTGAAGCAGTGAACAAATGAGGCTTGAAGTCTTGGGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR TCA 90 bp | GGTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATCATCTTCAAGCACTTTaGTGTCAGAATCCATTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHQTSLLGGLQVSGDVSNHLQAL*CQNPLS Trigger: GCTTAATGGATTCTGACATCAAAGTGCTTGAAGATG...ATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTCTCAAATGTCCACTGTaGGTCCCGCAGCGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLLTAELFLRTSQRILRILKCPL*VPQREL Trigger: GAGCTCGCGCTGCGGGACGCACAGTGGACATTTGAG...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CCA 90 bp | CATGAAGTCACTCAGGCATCAGACTGTGACCCAAATGTTGACAACACTGACTTTTCTCAAGGATCCTTCTaGGATACTGCCTCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HEVTQASDCDPNVDNTDFSQGSF*DTASVW Trigger: CCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAGA...AAAGTCAGTGTTGTCAACATTTGGGTCACAGTCTGATGCCTGAGTGACTTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTGTTTAAAGAGCAAATCCCAAGATATGTCACAACGCTATCAACACATATGTCGGAGGCCTTCCTaGCTCCAGTCTCGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPCLKSKSQDMSQRYQHICRRPS*LQSRLV Trigger: CACCAGCCGAGACTGGAGCCAGGAAGGCCTCCGACA...TATGTGTTGATAGCGTTGTGACATATCTTGGGATTTGCTCTTTAAACAAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR TCA 90 bp | CATGAAGTCACTCAGGCATCAGACTGTGACCCAAATGTTGACAACACTGACTTTTCCTCTGTAGCTGGATaGCAGGTCGCATCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HEVTQASDCDPNVDNTDFSSVAG*QVASLR Trigger: TCTTAAAGATGCGACCTGTCATCCAGCTACAGAGGA...AAAGTCAGTGTTGTCAACATTTGGGTCACAGTCTGATGCCTGAGTGACTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATATATCTTGTTCCTTATTTTACAAGCTGACGTTCTCCTaGACAGCCGACTCAAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGLQVSGDVSNISCSLFYKLTFS*TADSNV Trigger: GACATTTGAGTCGGCTGTGCAGGAGAACGTCAGCTT...GTAAAATAAGGAACAAGATATATTGGACACATCCCCAGAGACCTGAAGACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTGGATGTACAACAGGGTaGTACTGCTTCAGACTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: WLLTAELFLRTSQRILRIGCTTG*YCFRLA Trigger: CGCGAGTCTGAAGCAGTATCACCCTGTTGTACATCC...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 72 bp | ATGAAGTCACTCAGGCATCAGACTGTGACCCAAATGTaGACAACACTGACTTTCAGCTCCTCAACAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MKSLRHQTVTQM*TTLTFSSSTNR Trigger: TCTGTTTGTTGAGGAGCTGAAAGTCAGTGTTGTCAACATTTGGGTCACAGTCTGATGCCTGAGTGACTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| 3UTR CAA 72 bp | AGCTCCAACTGTCTTTTAAGCTTCAAAACTTTCATCTaGCCAATCCATGGCCTCAGAAGCTGCAACTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSNCLLSFKTFI*PIHGLRSCNSL Trigger: AAGGGAGTTGCAGCTTCTGAGGCCATGGATTGGCAAGATGAAAGTTTTGAAGCTTAAAAGACAGTTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTTAACTGCTGAGCTGTTTCTCAGGACCTCACAAAGAATTTTAAGAATTGAATCCATTAAGCCATaGTCTTTAGCTTCCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLLTAELFLRTSQRILRIESIKP*SLASSQ Trigger: CTGGGAGGAAGCTAAAGAGCATGGCTTAATGGATTC...AATTCTTAAAATTCTTTGTGAGGTCCTGAGAAACAGCTCAGCAGTTAAGAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR TCA 90 bp | CCCTATTCCTTGTTTAAAGAGCAAATCCCAAGATATGTCACAACGCTATCAACACATCTTCAAGCACTTTaGTGTCAGAATCCATTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYSLFKEQIPRYVTTLSTHLQAL*CQNPLS Trigger: GCTTAATGGATTCTGACATCAAAGTGCTTGAAGATG...TGTTGATAGCGTTGTGACATATCTTGGGATTTGCTCTTTAAACAAGGAATAGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS GCA 90 bp | AGCGCGAGCTCGCGGACGTCCTCCGGCAGCACGGCCCCGAGCTCCTaGACGAAGCGACCGCACATCTCCATCACTTCCATCACCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SASSRTSSGSTAPSS*TKRPHISITSITAL Trigger: GAGGGCGGTGATGGAAGTGATGGAGATGTGCGGTCGCTTCGTGCAGGAGCTCGGGGCCGTGCTGCCGGAGGACGTCCGCGAGCTCGCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS CCA 90 bp | AGGTGCAGCGCACTCGGAAGTCCTCTAGGGGAGAGTCTGCTGCCGTaGCCTGAGGGTCTGAGGCGGCCTGGGCATCGTGGTCCTGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RCSALGSPLGESLLP*PEGLRRPGHRGPAG Trigger: CCCCGCAGGACCACGATGCCCAGGCCGCCTCAGACCCTCAGGCCACGGCAGCAGACTCTCCCCTAGAGGACTTCCGAGTGCGCTGCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS CCA 90 bp | TTAGCACAATGTCGGAGGCCTTCCTGGCTCCAGTCTCGGCTGGTGTaGTTTCTACGTGTGTCACACGTGTGTCAGGCTTGGAGTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LAQCRRPSWLQSRLV*FLRVSHVCQAWSQL Trigger: AAGCTGACTCCAAGCCTGACACACGTGTGACACACGTAGAAACCACACCAGCCGAGACTGGAGCCAGGAAGGCCTCCGACATTGTGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS CCA 90 bp | AGTCTGGGGCTTTCTTTCTCTTTAGCACAATGTCGGAGGCCTTCCTaGCTCCAGTCTCGGCTGGTGTGGTTTCTACGTGTGTCACACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGLSFSLAQCRRPS*LQSRLVWFLRVSHV Trigger: CACGTGTGACACACGTAGAAACCACACCAGCCGAGACTGGAGCCAGGAAGGCCTCCGACATTGTGCTAAAGAGAAAGAAAGCCCCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS TCA 90 bp | GCTGGGTCAGGGTCACATTTCAGGTCCAGAGGATGTACAACAGGGTaGTACTGCTTCAGACTCGCGTGCTGTGCTTTCAAGGTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AGSGSHFRSRGCTTG*YCFRLACCAFKVLM Trigger: CATCAAAACCTTGAAAGCACAGCACGCGAGTCTGAAGCAGTATCACCCTGTTGTACATCCTCTGGACCTGAAATGTGACCCTGACCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS TCA 90 bp | CCTGGGTCAGGGTCACATTTCAGGTCCAGAGGATGTACAACAGGGTaGTACTGCTTCAGACTCGCGTGCTGTGCTTTCAAGGTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGSGSHFRSRGCTTG*YCFRLACCAFKVLM Trigger: CATCAAAACCTTGAAAGCACAGCACGCGAGTCTGAAGCAGTATCACCCTGTTGTACATCCTCTGGACCTGAAATGTGACCCTGACCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076952.12 ENSMUST00000139340.8 |
||
| CDS CCA 90 bp | AGCTATGGCTTCTCCGCGGCATTTCAAATCTTCTACACGAGAAGCTaGGTCAGGGTCACATTTCAGGTCCAGAGGATGTACAACAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SYGFSAAFQIFYTRS*VRVTFQVQRMYNRV Trigger: CACCCTGTTGTACATCCTCTGGACCTGAAATGTGACCCTGACCCAGCTTCTCGTGTAGAAGATTTGAAATGCCGCGGAGAAGCCATAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGTCAGAGGACAGTTTGTGAGCATCTGTTGTCTCCTTCCAGCATGTGGGTGTGCTTTCAAGGTTTaGATGACACTCTCAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: AEVRGQFVSICCLLPACGCAFKV*MTLSRI Trigger: GATCCTTGAGAGTGTCATCAAAACCTTGAAAGCACA...CCCACATGCTGGAAGGAGACAACAGATGCTCACAAACTGTCCTCTGACCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATATATCTTGTTCCTTATACACAGGCTCAGCTGTaGACCTGGGTCAGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FWEVFRSLGMCPIYLVPYTQAQL*TWVRVT Trigger: TGTGACCCTGACCCAGGTCAACAGCTGAGCCTGTGT...ATAAGGAACAAGATATATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS CCA 90 bp | TGGTTGATCCTCTGTAGCTGGATGACAGGTCGCATCTTTAAGACCTaGGAAAAGCCTTCTCCTTGTTCAATTAGCACAGGCAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WLILCSWMTGRIFKT*EKPSPCSISTGKAF Trigger: GAAGGCTTTGCCTGTGCTAATTGAACAAGGAGAAGGCTTTTCCCAGGTCTTAAAGATGCGACCTGTCATCCAGCTACAGAGGATCAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS-3UTR CAA 90 bp | GTCACCAGACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATATCATCTTCAAGCACTTaGATGTCAGAATCCATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTRQAFWEVFRSLGMCPISSSST*MSESIK Trigger: CTTAATGGATTCTGACATCAAAGTGCTTGAAGATGA...TATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTCTGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS-3UTR CAA 90 bp | GACAAGCCTTTTGGGAGGTCTTCAGGTCTCTGGGGATGTGTCCAATATATCTTGTGTGCTTTCAAGGTTTaGATGACACTCTCAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DKPFGRSSGLWGCVQYILCAFKV*MTLSRI Trigger: GATCCTTGAGAGTGTCATCAAAACCTTGAAAGCACA...CAAGATATATTGGACACATCCCCAGAGACCTGAAGACCTCCCAAAAGGCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139340.8 |
||
| CDS GCA 90 bp | GATGACACTCTCAAGGATCCTTCTGGGATACTGCCTCCGTTTGGTTaGCACATCTACTATGAGCTCATCAAATTCATCTTCAAGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: DDTLKDPSGILPPFG*HIYYELIKFIFKHF Trigger: AAAGTGCTTGAAGATGAATTTGATGAGCTCATAGTAGATGTGGCAACCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAGAGTGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS GCA 90 bp | GCTTTCAAGGTTTTGATGACACTCTCAAGGATCCTTCTGGGATACTaGCTCCGTTTGGTTGCCACATCTACTATGAGCTCATCAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: AFKVLMTLSRILLGY*LRLVATSTMSSSNS Trigger: TGAATTTGATGAGCTCATAGTAGATGTGGCAACCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAGAGTGTCATCAAAACCTTGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS GCA 90 bp | AATTCACTTCTTCTAGAATCCAATGTAACTCTGAAAATATCACTCTaGCAGAAATCACACACTGTGTTCCTGGGTCAGGGTCACATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSLLLESNVTLKISL*QKSHTVFLGQGHIS Trigger: TGAAATGTGACCCTGACCCAGGAACACAGTGTGTGATTTCTGGCAGAGTGATATTTTCAGAGTTACATTGGATTCTAGAAGAAGTGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076952.12 |
||
| CDS-3UTR CAA 90 bp | ACTTTAAAGACCCAAACACTCCCCCATGCAATCATTAACTTAAGTAAAACAGAATCATCTTCAAGCACTTaGATGTCAGAATCCATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLKTQTLPHAIINLSKTESSSST*MSESIK Trigger: CTTAATGGATTCTGACATCAAAGTGCTTGAAGATGA...TTCTGTTTTACTTAAGTTAATGATTGCATGGGGGAGTGTTTGGGTCTTTAAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS GCA 72 bp | TCGCGGACGTCCTCCGGCAGCACGGCCCCGAGCTCCTaGACGAAGCGACCGCACATCTCCATCACTTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SRTSSGSTAPSS*TKRPHISITSI Trigger: GATGGAAGTGATGGAGATGTGCGGTCGCTTCGTGCAGGAGCTCGGGGCCGTGCTGCCGGAGGACGTCCGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS GCA 72 bp | GACGTTCTCCTGCACAGCCGACTCAAATGTCCACTGTaGGTCCCGCAGCGCGAGCTCGCGGACGTCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: DVLLHSRLKCPL*VPQRELADVLR Trigger: CCGGAGGACGTCCGCGAGCTCGCGCTGCGGGACGCACAGTGGACATTTGAGTCGGCTGTGCAGGAGAACGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS CCA 72 bp | GCACTCGGAAGTCCTCTAGGGGAGAGTCTGCTGCCGTaGCCTGAGGGTCTGAGGCGGCCTGGGCATCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALGSPLGESLLP*PEGLRRPGHRG Trigger: ACCACGATGCCCAGGCCGCCTCAGACCCTCAGGCCACGGCAGCAGACTCTCCCCTAGAGGACTTCCGAGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS CCA 72 bp | TGTCGGAGGCCTTCCTGGCTCCAGTCTCGGCTGGTGTaGTTTCTACGTGTGTCACACGTGTGTCAGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRRPSWLQSRLV*FLRVSHVCQAW Trigger: CCAAGCCTGACACACGTGTGACACACGTAGAAACCACACCAGCCGAGACTGGAGCCAGGAAGGCCTCCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS CCA 72 bp | CTTTCTTTCTCTTTAGCACAATGTCGGAGGCCTTCCTaGCTCCAGTCTCGGCTGGTGTGGTTTCTACGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSFSLAQCRRPS*LQSRLVWFLRV Trigger: CACACGTAGAAACCACACCAGCCGAGACTGGAGCCAGGAAGGCCTCCGACATTGTGCTAAAGAGAAAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS TCA 72 bp | GGGTCACATTTCAGGTCCAGAGGATGTACAACAGGGTaGTACTGCTTCAGACTCGCGTGCTGTGCTTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSHFRSRGCTTG*YCFRLACCAFK Trigger: CTTGAAAGCACAGCACGCGAGTCTGAAGCAGTATCACCCTGTTGTACATCCTCTGGACCTGAAATGTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS CCA 72 bp | CTCTGTAGCTGGATGACAGGTCGCATCTTTAAGACCTaGGAAAAGCCTTCTCCTTGTTCAATTAGCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCSWMTGRIFKT*EKPSPCSISTG Trigger: GCCTGTGCTAATTGAACAAGGAGAAGGCTTTTCCCAGGTCTTAAAGATGCGACCTGTCATCCAGCTACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078259.8 |
||
| CDS CCA 72 bp | AAATATCACTCTGCCAGAAATCACACACTGTGTTCCTaGGTCAGGGTCACATTTCAGGTCCAGAGGATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KYHSARNHTLCS*VRVTFQVQRMY Trigger: GTACATCCTCTGGACCTGAAATGTGACCCTGACCCAGGAACACAGTGTGTGATTTCTGGCAGAGTGATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076952.12 |
||
| CDS GCA 72 bp | CTCAAGGATCCTTCTGGGATACTGCCTCCGTTTGGTTaGCACATCTACTATGAGCTCATCAAATTCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKDPSGILPPFG*HIYYELIKFIF Trigger: GAAGATGAATTTGATGAGCTCATAGTAGATGTGGCAACCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS CAA 72 bp | ACACTCTCAAGGATCCTTCTGGGATACTGCCTCCGTTaGGTTGCCACATCTACTATGAGCTCATCAAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: TLSRILLGYCLR*VATSTMSSSNS Trigger: TGAATTTGATGAGCTCATAGTAGATGTGGCAACCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS CAA 90 bp | GTTTTGATGACACTCTCAAGGATCCTTCTGGGATACTGCCTCCGTTaGGTTGCCACATCTACTATGAGCTCATCAAATTCATCTTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLMTLSRILLGYCLR*VATSTMSSSNSSSS Trigger: GCTTGAAGATGAATTTGATGAGCTCATAGTAGATGTGGCAACCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAGAGTGTCATCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076952.12 ENSMUST00000078259.8 ENSMUST00000139340.8 |
||
| CDS GCA 72 bp | CTTCTAGAATCCAATGTAACTCTGAAAATATCACTCTaGCAGAAATCACACACTGTGTTCCTGGGTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLESNVTLKISL*QKSHTVFLGQG Trigger: ACCCTGACCCAGGAACACAGTGTGTGATTTCTGGCAGAGTGATATTTTCAGAGTTACATTGGATTCTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076952.12 |
||