Pregenerated sensors for NSG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020297Ensembl transcript IDs: ENSMUST00000020537.9, ENSMUST00000093219.4, ENSMUST00000109409.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAACATCACCTTCCTCTCCAAATCAGCCTTGCCTGCCATCGCTGTaGTTCTCTCCTGCAGACCACAGGCAAACTGAACAGCCCACCCTT | + |
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Preference number: 1 (lower is better) Translates to: PTSPSSPNQPCLPSL*FSPADHRQTEQPTL Trigger: AAGGGTGGGCTGTTCAGTTTGCCTGTGGTCTGCAGGAGAGAAGCACAGCGATGGCAGGCAAGGCTGATTTGGAGAGGAAGGTGATGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR GCA 90 bp | ATGGGCTGCCCAGGGCTGAGCGTGGATGCCTCCCCCATGAGTTTGTaGAAATCTTGCAAGCTCACCATTGAGTGGTACTCTGTGCATTCC | + |
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Preference number: 1 (lower is better) Translates to: MGCPGLSVDASPMSL*KSCKLTIEWYSVHS Trigger: GGAATGCACAGAGTACCACTCAATGGTGAGCTTGCAAGATTTGCACAAACTCATGGGGGAGGCATCCACGCTCAGCCCTGGGCAGCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 90 bp | GACCAAATGGGCAATTCCCCTGGCCAGTTCTCATTCTCTTGGACCTaGGGCCAGCACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCG | + |
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Preference number: 1 (lower is better) Translates to: DQMGNSPGQFSFSWT*GQHLQEKGFPGMLA Trigger: CGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTGCTGGCCCCAGGTCCAAGAGAATGAGAACTGGCCAGGGGAATTGCCCATTTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR GCA 90 bp | GTTGAGAAATGCCAACATCACCTTCCTCTCCAAATCAGCCTTGCCTaGCATCGCTGTGCTTCTCTCCTGCAGACCACAGGCAAACTGAAC | + |
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Preference number: 1 (lower is better) Translates to: VEKCQHHLPLQISLA*HRCASLLQTTGKLN Trigger: GTTCAGTTTGCCTGTGGTCTGCAGGAGAGAAGCACAGCGATGGCAGGCAAGGCTGATTTGGAGAGGAAGGTGATGTTGGCATTTCTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 90 bp | GCCACACCTCCCTGTCAGGTGCTTCTAGAACCTAGCTGGGAAGTCTaGACAACTCTGTCAACACAACACAGTGAGCAAACAGTCACCTTC | + |
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Preference number: 1 (lower is better) Translates to: ATPPCQVLLEPSWEV*TTLSTQHSEQTVTF Trigger: GAAGGTGACTGTTTGCTCACTGTGTTGTGTTGACAGAGTTGTCCAGACTTCCCAGCTAGGTTCTAGAAGCACCTGACAGGGAGGTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 90 bp | AGGATGTTGGCCACACCTCCCTGTCAGGTGCTTCTAGAACCTAGCTaGGAAGTCTGGACAACTCTGTCAACACAACACAGTGAGCAAACA | + |
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Preference number: 1 (lower is better) Translates to: RMLATPPCQVLLEPS*EVWTTLSTQHSEQT Trigger: TGTTTGCTCACTGTGTTGTGTTGACAGAGTTGTCCAGACTTCCCAGCTAGGTTCTAGAAGCACCTGACAGGGAGGTGTGGCCAACATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR TCA 90 bp | GGATGCCTCCCCCATGAGTTTGTGCAAATCTTGCAAGCTCACCATTaGGTGGTACTCTGTGCATTCCTAGTTGAGAAATGCCAACATCAC | + |
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Preference number: 1 (lower is better) Translates to: GCLPHEFVQILQAHH*VVLCAFLVEKCQHH Trigger: GTGATGTTGGCATTTCTCAACTAGGAATGCACAGAGTACCACTCAATGGTGAGCTTGCAAGATTTGCACAAACTCATGGGGGAGGCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR TCA 90 bp | GCGCTCTGTGGTTTTGCTAGGGAAGATTTGTTGATCCGTTTCAGATaGCAAATGAATTTACAGGTGACTCAAGGTGATGGGAAGATGGGG | + |
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Preference number: 1 (lower is better) Translates to: ALCGFAREDLLIRFR*QMNLQVTQGDGKMG Trigger: CCCCATCTTCCCATCACCTTGAGTCACCTGTAAATTCATTTGTCATCTGAAACGGATCAACAAATCTTCCCTAGCAAAACCACAGAGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 90 bp | TGGGAACAATCAACGCGAAACATGCCTTTGTACACGAGCCTGACTTaGGTACGAAGCAACAATACAAAAGAACAAAAGGAAAGATCGATT | + |
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Preference number: 1 (lower is better) Translates to: WEQSTRNMPLYTSLT*VRSNNTKEQKERSI Trigger: AATCGATCTTTCCTTTTGTTCTTTTGTATTGTTGCTTCGTACCCAAGTCAGGCTCGTGTACAAAGGCATGTTTCGCGTTGATTGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR TCA 90 bp | AGCTATTCTGAGTATATAACCATAGGAAATAAAGCCAGCAAATCATaGCACATGTGCCCGTCCATGTTTATAATAGTGCTACTCCCAACA | + |
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Preference number: 1 (lower is better) Translates to: SYSEYITIGNKASKS*HMCPSMFIIVLLPT Trigger: TGTTGGGAGTAGCACTATTATAAACATGGACGGGCACATGTGTCATGATTTGCTGGCTTTATTTCCTATGGTTATATACTCAGAATAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR CCA 90 bp | TGGCAAAGAAGTATAAATGCAAAGTCTGAGCTAAGAATAAATAGTTaGATCATGGTGACATACGCCTTTAATCCCAGCACTCCAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: WQRSINAKSELRINS*IMVTYAFNPSTPKK Trigger: CTTCTTTGGAGTGCTGGGATTAAAGGCGTATGTCACCATGATCCAACTATTTATTCTTAGCTCAGACTTTGCATTTATACTTCTTTGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR-3UTR GCA 90 bp | CAGCACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGCCCAGGGCTGAGCGTGGATaGCTCCCCCATGAGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: QHLQEKGFPGMLARSRRPRAERG*LPHEFV Trigger: CACAAACTCATGGGGGAGGCATCCACGCTCAGCCCT...GGGCCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CAA 90 bp | CCCATGGGCTGCCCAGGGCTGAGCGTGGATGCCTCCCCCATGAGTTaGTGCAAATCTTGCAAGCTCACCATTGAGTGGTACTCTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: PMGCPGLSVDASPMS*CKSCKLTIEWYSVH Trigger: ATGCACAGAGTACCACTCAATGGTGAGCTTGCAAGATTTGCACAAACTCATGGGGGAGGCATCCACGCTCAGCCCTGGGCAGCCCATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGCCCTTGTGCCTGCCATCGCTGTaGTTCTCTCCTGCAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: HLQEKGFPGMLARSRRPLCLPSL*FSPADH Trigger: GTGGTCTGCAGGAGAGAAGCACAGCGATGGCAGGCA...CAAGGGCCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGACAACTCTGTCAACACAACACAGTGAGCAAACAGTCACCTTCTCCAGCCCAGAGCGGCCCGCCTaGCCTCTCTTCCTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: VWTTLSTQHSEQTVTFSSPERPA*PLFLSL Trigger: GAGAGAAAGGAAGAGAGGTCAGGCGGGCCGCTCTGG...GCTGGAGAAGGTGACTGTTTGCTCACTGTGTTGTGTTGACAGAGTTGTCCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGCACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGTGGATGCCTCCCCCATaGGTTTGTGCAAATCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GQHLQEKGFPGMLARSRRWMPPP*VCANLA Trigger: TGCAAGATTTGCACAAACTCATGGGGGAGGCATCCA...CCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTGCTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTCTCATTCTCTTGGACCTGGGGCCAGCACCTCCAAGAAAAGGGATTTCCTCTCCAAATCAGCCTTaGCTGCCATCGCTGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PVLILLDLGPAPPRKGISSPNQP*LPSLCF Trigger: GAAGCACAGCGATGGCAGGCAAGGCTGATTTGGAGA...GGAAATCCCTTTTCTTGGAGGTGCTGGCCCCAGGTCCAAGAGAATGAGAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGCCCTTGTCCCCCATGAGTTTGTaGAAATCTTGCAAGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: HLQEKGFPGMLARSRRPLSPMSL*KSCKLT Trigger: GGTGAGCTTGCAAGATTTGCACAAACTCATGGGGGA...CAAGGGCCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGACAACTCTGTCAACACAACACAGTGAGCAAACAGTCACCTTCTCCAGCGACTCTGCTCTTTACTaGCCTGCTGTGTCTTCCACG | + |
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Preference number: 2 (lower is better) Translates to: VWTTLSTQHSEQTVTFSSDSALY*PAVSST Trigger: CGTGGAAGACACAGCAGGGCAGTAAAGAGCAGAGTC...GCTGGAGAAGGTGACTGTTTGCTCACTGTGTTGTGTTGACAGAGTTGTCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCATTGGCATTTTGACACAGAGAATGAACCTGCCAACAAATCACCGGGAATTCCCAGGCTTAGGGTaGGAGAAGGTCTTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: TAIGILTQRMNLPTNHREFPGLG*EKVLCP Trigger: GGGACACAAGACCTTCTCCCACCCTAAGCCTGGGAA...TTCCCGGTGATTTGTTGGCAGGTTCATTCTCTGTGTCAAAATGCCAATGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGCCCTTGAATAAGCGGCGGCTTTaGAAATATCTTACATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HLQEKGFPGMLARSRRPLNKRRL*KYLTWE Trigger: TTCCCATGTAAGATATTTTCAAAGCCGCCGCTTATT...CAAGGGCCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR GCA 90 bp | GATGAGAGTATCTGGCAGGATGGTTTGAGATATACTATTCCTATTACCCAGCTGCTCCCTTCCCACCCCTaGCATCTTGAAAACACGGGC | + |
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Preference number: 2 (lower is better) Translates to: DESIWQDGLRYTIPITQLLPSHP*HLENTG Trigger: GCCCGTGTTTTCAAGATGGCAGGGGTGGGAAGGGAG...CAGCTGGGTAATAGGAATAGTATATCTCAAACCATCCTGCCAGATACTCTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGCAAGAAGAGGAGGGAGATGTGGGGAGGAGGAGATGGAGGAGGAGGAAGGAGAGAGGACTTGAATaGAGAGTAATGATAGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QEQEEEGDVGRRRWRRRKERGLE*RVMIEF Trigger: AAACTCTATCATTACTCTCCATTCAAGTCCTCTCTC...CTTCCTCCTCCTCCATCTCCTCCTCCCCACATCTCCCTCCTCTTCTTGCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR CAA 90 bp | ACAACAAATCCAGAAGGCTTCCCAGGCTTAGGGTGGGAGAAGGTCTaGTGTCCCTTTAGGAGAGTGAAATGTGGCTGTGTTTTCTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: TTNPEGFPGLGWEKV*CPFRRVKCGCVFFH Trigger: ATGAAAGAAAACACAGCCACATTTCACTCTCCTAAAGGGACACAAGACCTTCTCCCACCCTAAGCCTGGGAAGCCTTCTGGATTTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR-3UTR TCA 90 bp | ACCATAGCCAACCTAGCCACACAGAGAACTTTCAGGCAAGATTCAAAGGTCGAACGAAGTGGCTGCCAATaGCGAGCAGATAAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: TIANLATQRTFRQDSKVERSGCQ*RADKEN Trigger: GTTTTCTTTATCTGCTCGTCATTGGCAGCCACTTCG...TTCGACCTTTGAATCTTGCCTGAAAGTTCTCTGTGTGGCTAGGTTGGCTATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGACAACTCTGTCAACACAACACAGTGAGCAAACAGTCACCTTCTCCAGCAGTTTGTGCAAATCTTaGAAGCTCACCATTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VWTTLSTQHSEQTVTFSSSLCKS*KLTIEW Trigger: CCACTCAATGGTGAGCTTGCAAGATTTGCACAAACT...GCTGGAGAAGGTGACTGTTTGCTCACTGTGTTGTGTTGACAGAGTTGTCCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR TCA 90 bp | GATACTAGCACAAACAGTAATGCTGGATTTCCAACCCACTCTTCAGTCAGAGGCGAGGGAGAGAGGACTTaGATGGAGAGTAATGATAGA | + |
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Preference number: 2 (lower is better) Translates to: DTSTNSNAGFPTHSSVRGEGERT*MESNDR Trigger: TCTATCATTACTCTCCATTCAAGTCCTCTCTCCCTC...GCCTCTGACTGAAGAGTGGGTTGGAAATCCAGCATTACTGTTTGTGCTAGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAGTAATGCTGGATTTCCAACCCACTCTTCAGTCAGAGGCAAAGTCCAGGTCCCTTTAGGAGAGTaGAATGTGGCTGTGTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: TNSNAGFPTHSSVRGKVQVPLGE*NVAVFS Trigger: AGAAAACACAGCCACATTTCACTCTCCTAAAGGGAC...CTGGACTTTGCCTCTGACTGAAGAGTGGGTTGGAAATCCAGCATTACTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGATGAGAGTATCTGGCAGGATGGTTTGAGATATACTATTCCTATTACCCAGTTGCAAGCTCACCATTaGGTGGTACTCTGTGCATTC | + |
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Preference number: 2 (lower is better) Translates to: SDESIWQDGLRYTIPITQLQAHH*VVLCAF Trigger: GAATGCACAGAGTACCACTCAATGGTGAGCTTGCAA...CTGGGTAATAGGAATAGTATATCTCAAACCATCCTGCCAGATACTCTCATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CAA 90 bp | ATGGGAACAATCAACGCGAAACATGCCTTTGTACACGAGCCTGACTaGGGTACGAAGCAACAATACAAAAGAACAAAAGGAAAGATCGAT | + |
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Preference number: 2 (lower is better) Translates to: MGTINAKHAFVHEPD*GTKQQYKRTKGKID Trigger: ATCGATCTTTCCTTTTGTTCTTTTGTATTGTTGCTTCGTACCCAAGTCAGGCTCGTGTACAAAGGCATGTTTCGCGTTGATTGTTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAATTATAAAGCGCTCTGTGGTTTTGCTAGGGAAGATTTGTTGATCCGTTTCCTGTCATTAGCGCTTTaGGGAAAAAGCAAAACCCGG | + |
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Preference number: 2 (lower is better) Translates to: QNYKALCGFAREDLLIRFLSLAL*GKSKTR Trigger: CCGGGTTTTGCTTTTTCCCCAAAGCGCTAATGACAG...GAAACGGATCAACAAATCTTCCCTAGCAAAACCACAGAGCGCTTTATAATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGCCAACCTAGCCACACAGAGAACTTTCAGGCAAGATTCAAAGGTCGAACCATTTGCATCAAAATaGAAGGAACTAAAGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: TIANLATQRTFRQDSKVEPFASK*KELKDL Trigger: CAAGTCCTTTAGTTCCTTCCATTTTGATGCAAATGG...TTCGACCTTTGAATCTTGCCTGAAAGTTCTCTGTGTGGCTAGGTTGGCTATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCATTGGCATTTTGACACAGAGAATGAACCTGCCAACAAATCACCGGGAACTAAGAATAAATAGTTaGATCATGGTGACATACGCC | + |
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Preference number: 2 (lower is better) Translates to: TAIGILTQRMNLPTNHRELRINS*IMVTYA Trigger: GGCGTATGTCACCATGATCCAACTATTTATTCTTAG...TTCCCGGTGATTTGTTGGCAGGTTCATTCTCTGTGTCAAAATGCCAATGGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR TCA 72 bp | ATCGCTGTGCTTCTCTCCTGCAGACCACAGGCAAACTaGACAGCCCACCCTTCGCCACGCAGTACTCGGACG | + |
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Preference number: 3 (lower is better) Translates to: IAVLLSCRPQAN*TAHPSPRSTRT Trigger: CGTCCGAGTACTGCGTGGCGAAGGGTGGGCTGTTCAGTTTGCCTGTGGTCTGCAGGAGAGAAGCACAGCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR GCA 72 bp | CTAGGTCCCCATGGGCTGCCCAGGGCTGAGCGTGGATaGCTCCCCCATGAGTTTGTGCAAATCTTGCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: LGPHGLPRAERG*LPHEFVQILQA Trigger: AGCTTGCAAGATTTGCACAAACTCATGGGGGAGGCATCCACGCTCAGCCCTGGGCAGCCCATGGGGACCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGCACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGTATCCACGCCTGTGTTaGCTGAGGCACAACAGCCGC | + |
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Preference number: 3 (lower is better) Translates to: GQHLQEKGFPGMLARSRRYPRLC*LRHNSR Trigger: GCGGCTGTTGTGCCTCAGCAAACACAGGCGTGGATA...CCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTGCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 72 bp | GAGCAAGAAGAGGAGGGAGATGTGGGGAGGAGGAGATaGAGGAGGAGGAAGGGAAGGAGAGCAACAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: EQEEEGDVGRRR*RRRKGRRATAP Trigger: TGGTGCTGTTGCTCTCCTTCCCTTCCTCCTCCTCCATCTCCTCCTCCCCACATCTCCCTCCTCTTCTTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR GCA 72 bp | TGCCAACATCACCTTCCTCTCCAAATCAGCCTTGCCTaGCATCGCTGTGCTTCTCTCCTGCAGACCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: CQHHLPLQISLA*HRCASLLQTTG Trigger: GCCTGTGGTCTGCAGGAGAGAAGCACAGCGATGGCAGGCAAGGCTGATTTGGAGAGGAAGGTGATGTTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 72 bp | GACCTGGGGCCAGCACCTCCAAGAAAAGGGATTTCCTaGAATGCTCGCGAGAAGCAGGAGGCCCTTGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: DLGPAPPRKGIS*NAREKQEALAK Trigger: TTTAGCAAGGGCCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTGCTGGCCCCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGCCCACGCGAAACATGCCTTaGTACACGAGCCTGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: QHLQEKGFPGMLARSRRPTRNMP*YTSLTW Trigger: CCAAGTCAGGCTCGTGTACAAAGGCATGTTTCGCGT...GGGCCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR GCA 72 bp | CCTTCCTCTCCAAATCAGCCTTGCCTGCCATCGCTGTaGTTCTCTCCTGCAGACCACAGGCAAACTGAACAG | + |
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Preference number: 3 (lower is better) Translates to: PSSPNQPCLPSL*FSPADHRQTEQ Trigger: CTGTTCAGTTTGCCTGTGGTCTGCAGGAGAGAAGCACAGCGATGGCAGGCAAGGCTGATTTGGAGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR GCA 72 bp | CCAGGGCTGAGCGTGGATGCCTCCCCCATGAGTTTGTaGAAATCTTGCAAGCTCACCATTGAGTGGTACTCT | + |
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Preference number: 3 (lower is better) Translates to: PGLSVDASPMSL*KSCKLTIEWYS Trigger: AGAGTACCACTCAATGGTGAGCTTGCAAGATTTGCACAAACTCATGGGGGAGGCATCCACGCTCAGCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 72 bp | TTAAACGGCCTATGCAGACCAAATGGGCAATTCCCCTaGCCAGTTCTCATTCTCTTGGACCTGGGGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LNGLCRPNGQFP*PVLILLDLGPA Trigger: TGCTGGCCCCAGGTCCAAGAGAATGAGAACTGGCCAGGGGAATTGCCCATTTGGTCTGCATAGGCCGTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 72 bp | GCCACACCTCCCTGTCAGGTGCTTCTAGAACCTAGCTaGGAAGTCTGGACAACTCTGTCAACACAACACAGT | + |
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Preference number: 3 (lower is better) Translates to: ATPPCQVLLEPS*EVWTTLSTQHS Trigger: ACTGTGTTGTGTTGACAGAGTTGTCCAGACTTCCCAGCTAGGTTCTAGAAGCACCTGACAGGGAGGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 72 bp | TCTATAGTATCCAAGAGCAAGAAGAGGAGGGAGATGTaGGGAGGAGGAGATGGAGGAGGAGGAAGGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SIVSKSKKRREM*GGGDGGGGREG Trigger: TCCTTCCCTTCCTCCTCCTCCATCTCCTCCTCCCCACATCTCCCTCCTCTTCTTGCTCTTGGATACTATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| 3UTR GCA 72 bp | AGCGTGGATGCCTCCCCCATGAGTTTGTGCAAATCTTaGAAGCTCACCATTGAGTGGTACTCTGTGCATTCC | + |
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Preference number: 3 (lower is better) Translates to: SVDASPMSLCKS*KLTIEWYSVHS Trigger: GGAATGCACAGAGTACCACTCAATGGTGAGCTTGCAAGATTTGCACAAACTCATGGGGGAGGCATCCACGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR GCA 72 bp | TTATCTAAGAAGTCCCAGACAGACTCTGCTCTTTACTaGCCTGCTGTGTCTTCCACGTGGAGCCCGTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LSKKSQTDSALY*PAVSSTWSPFH Trigger: ATGAAACGGGCTCCACGTGGAAGACACAGCAGGGCAGTAAAGAGCAGAGTCTGTCTGGGACTTCTTAGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| 3UTR CCA 72 bp | CCCTGTCAGGTGCTTCTAGAACCTAGCTGGGAAGTCTaGACAACTCTGTCAACACAACACAGTGAGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PCQVLLEPSWEV*TTLSTQHSEQT Trigger: TGTTTGCTCACTGTGTTGTGTTGACAGAGTTGTCCAGACTTCCCAGCTAGGTTCTAGAAGCACCTGACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR GCA 72 bp | CACCTTCTCCAGCTTCTTTTAGGAATGAGCACTGCCTaGCCAATCTTCAAGTTTCTTCCCGGCTGTCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: HLLQLLLGMSTA*PIFKFLPGCQI Trigger: AATCTGACAGCCGGGAAGAAACTTGAAGATTGGGCAGGCAGTGCTCATTCCTAAAAGAAGCTGGAGAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CCA 72 bp | GAAACAACAAATCCAGAAGGCTTCCCAGGCTTAGGGTaGGAGAAGGTCTTGTGTCCCTTTAGGAGAGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ETTNPEGFPGLG*EKVLCPFRRVK Trigger: TTTCACTCTCCTAAAGGGACACAAGACCTTCTCCCACCCTAAGCCTGGGAAGCCTTCTGGATTTGTTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| 3UTR TCA 72 bp | CTGGGAAGTCTGGACAACTCTGTCAACACAACACAGTaGGCAAACAGTCACCTTCTCCAGCTTCTTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGSLDNSVNTTQ*ANSHLLQLLLG Trigger: TCCTAAAAGAAGCTGGAGAAGGTGACTGTTTGCTCACTGTGTTGTGTTGACAGAGTTGTCCAGACTTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR TCA 72 bp | AGCTCACCATTGAGTGGTACTCTGTGCATTCCTAGTTaGGAAATGCCAACATCACCTTCCTCTCCAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSPLSGTLCIPS*EMPTSPSSPNQ Trigger: CTGATTTGGAGAGGAAGGTGATGTTGGCATTTCTCAACTAGGAATGCACAGAGTACCACTCAATGGTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR TCA 72 bp | CCCCATGAGTTTGTGCAAATCTTGCAAGCTCACCATTaGGTGGTACTCTGTGCATTCCTAGTTGAGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: PHEFVQILQAHH*VVLCAFLVEKC Trigger: GCATTTCTCAACTAGGAATGCACAGAGTACCACTCAATGGTGAGCTTGCAAGATTTGCACAAACTCATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR GCA 72 bp | AGTGTTAGATGCGAAGAAGGAGGAAATCACGCCATTTaGATCAAAATGGAAGGAACTAAAGGACTTGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVRCEEGGNHAI*IKMEGTKGLGA Trigger: AGCACCAAGTCCTTTAGTTCCTTCCATTTTGATGCAAATGGCGTGATTTCCTCCTTCTTCGCATCTAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| 3UTR CCA 72 bp | TCAACGCGAAACATGCCTTTGTACACGAGCCTGACTTaGGTACGAAGCAACAATACAAAAGAACAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: STRNMPLYTSLT*VRSNNTKEQKE Trigger: TTCCTTTTGTTCTTTTGTATTGTTGCTTCGTACCCAAGTCAGGCTCGTGTACAAAGGCATGTTTCGCGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR TCA 72 bp | AGGAGAAATCAGATGAGAGTATCTGGCAGGATGGTTTaGGATATACTATTCCTATTACCCAGCTGCTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RRNQMRVSGRMV*DILFLLPSCCV Trigger: TACACAGCAGCTGGGTAATAGGAATAGTATATCTCAAACCATCCTGCCAGATACTCTCATCTGATTTCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR TCA 72 bp | GGTTTTGCTAGGGAAGATTTGTTGATCCGTTTCAGATaGCAAATGAATTTACAGGTGACTCAAGGTGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GFAREDLLIRFR*QMNLQVTQGDG Trigger: CCCATCACCTTGAGTCACCTGTAAATTCATTTGTCATCTGAAACGGATCAACAAATCTTCCCTAGCAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR TCA 72 bp | CAGAGAATGAACCTGCCAACAAATCACCGGGAACAATaGGAAGTTAACTGCCCAATGGCAAAGAAGTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRMNLPTNHREQ*EVNCPMAKKYK Trigger: TTTATACTTCTTTGCCATTGGGCAGTTAACTTCTCATTGTTCCCGGTGATTTGTTGGCAGGTTCATTCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| 3UTR CCA 72 bp | CAAATCACCGGGAACAATGAGAAGTTAACTGCCCAATaGCAAAGAAGTATAAATGCAAAGTCTGAGCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QITGNNEKLTAQ*QRSINAKSELR Trigger: TCTTAGCTCAGACTTTGCATTTATACTTCTTTGCCATTGGGCAGTTAACTTCTCATTGTTCCCGGTGATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| 3UTR CCA 72 bp | CAAACAACCAAAACAAACAGTATACATAGTTCAGTGTaGATACTAGCACAAACAGTAATGCTGGATTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QTTKTNSIHSSV*ILAQTVMLDFQ Trigger: TTGGAAATCCAGCATTACTGTTTGTGCTAGTATCCACACTGAACTATGTATACTGTTTGTTTTGGTTGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| CDS-3UTR CCA 90 bp | TCTCTCCTGCAGACCACAGGCAAACTGAACAGCCCACCCTTCGCCACGCAGTACAGCGGCTCCTGGAGCTaGGGTCCTGGGACGAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLQTTGKLNSPPFATQYSGSWS*GPGTSS Trigger: ACTACTCGTCCCAGGACCCCAGCTCCAGGAGCCGCT...GTACTGCGTGGCGAAGGGTGGGCTGTTCAGTTTGCCTGTGGTCTGCAGGAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR TCA 90 bp | GGCCAGCACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGGCAGCCAGCTGCAAATaGTTAACCTCCAAGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQHLQEKGFPGMLARSRRAASCK*LTSKGV Trigger: CACGCCCTTGGAGGTTAATCATTTGCAGCTGGCTGC...CCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTGCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGAACCTAGCTGGGAAGTCTGGACAACTCTGTCAACACAACACAGTGAGACAGCCATGGCCCGATaGCCCGGGCAGTGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLEPSWEVWTTLSTQHSETAMAR*PGQCSA Trigger: AGCAGAGCACTGCCCGGGCCATCGGGCCATGGCTGT...CTCACTGTGTTGTGTTGACAGAGTTGTCCAGACTTCCCAGCTAGGTTCTAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | TGCCCAGGGCTGAGCGTGGATGCCTCCCCCATGAGTTaGTGCAAATCTTGCAAGCTCACCATTGAGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPGLSVDASPMS*CKSCKLTIEWY Trigger: GTACCACTCAATGGTGAGCTTGCAAGATTTGCACAAACTCATGGGGGAGGCATCCACGCTCAGCCCTGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR GCA 90 bp | TCGGACGCCCACACAGAAGCCATGGGGCCTTATCTAAGAAGTCCCAGACAGACTCCACCAGGAACACAATaGAAGCAAGGAAGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDAHTEAMGPYLRSPRQTPPGTQ*KQGRQG Trigger: CCCTTGCCTTCCTTGCTTGCATTGTGTTCCTGGTGG...AGTCTGTCTGGGACTTCTTAGATAAGGCCCCATGGCTTCTGTGTGGGCGTCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR CCA 90 bp | AGTCACCTTCTCCAGCTTCTTTTAGGAATGAGCACTGCCTGCCCAATCTTCAAGTGTAGAAGCGGCTCCTaGAGCTGGGGTCCTGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SHLLQLLLGMSTACPIFKCRSGS*SWGPGT Trigger: CGTCCCAGGACCCCAGCTCCAGGAGCCGCTTCTACA...CTTGAAGATTGGGCAGGCAGTGCTCATTCCTAAAAGAAGCTGGAGAAGGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | GCCCTTGCTAAAGTGCCAGTGAGAAGCCTAAGGATGTaGGCCACACCTCCCTGTCAGGTGCTTCTAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ALAKVPVRSLRM*ATPPCQVLLEP Trigger: AGGTTCTAGAAGCACCTGACAGGGAGGTGTGGCCAACATCCTTAGGCTTCTCACTGGCACTTTAGCAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR GCA 90 bp | GTCACATTTCCTGAAGATTGTGGTGGAAACACAGGAAGAAGAGGGCAGGGGATAACTCCACAGAGTCCCTaGGCCACAGCAAGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTFPEDCGGNTGRRGQGITPQSP*ATASVP Trigger: GGGGACACTTGCTGTGGCGCAGGGACTCTGTGGAGT...TATCCCCTGCCCTCTTCTTCCTGTGTTTCCACCACAATCTTCAGGAAATGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCCATCGCTGTGCTTCTCTCCTGCAGACCACAGGCAAACTGAACAGCCCTTCCTCTGTTCCGGCTaGTATTCTGTTCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPSLCFSPADHRQTEQPFLCSG*YSVLVF Trigger: GAAGACAAGAACAGAATACCAGCCGGAACAGAGGAA...GGGCTGTTCAGTTTGCCTGTGGTCTGCAGGAGAGAAGCACAGCGATGGCAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | AGAAATGCCAACATCACCTTCCTCTCCAAATCAGCCTaGCCTGCCATCGCTGTGCTTCTCTCCTGCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RNANITFLSKSA*PAIAVLLSCRP Trigger: TGGTCTGCAGGAGAGAAGCACAGCGATGGCAGGCAAGGCTGATTTGGAGAGGAAGGTGATGTTGGCATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | CCAGAAGGCTTCCCAGGCTTAGGGTGGGAGAAGGTCTaGTGTCCCTTTAGGAGAGTGAAATGTGGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEGFPGLGWEKV*CPFRRVKCGCV Trigger: AACACAGCCACATTTCACTCTCCTAAAGGGACACAAGACCTTCTCCCACCCTAAGCCTGGGAAGCCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGAGGACTTGAATGGAGAGTAATGATAGAGTTTGGGGTGGTAGGGGAGGCAGCCAGCTGCAAATaGTTAACCTCCAAGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RERGLEWRVMIEFGVVGEAASCK*LTSKGV Trigger: CACGCCCTTGGAGGTTAATCATTTGCAGCTGGCTGC...CTCCCCTACCACCCCAAACTCTATCATTACTCTCCATTCAAGTCCTCTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| CDS-3UTR TCA 90 bp | GTCACATTTCCTGAAGATTGTGGTGGAAACACAGGAAGAAGAGGGCAGGGGATAGCAGCCAGCTGCAAATaGTTAACCTCCAAGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTFPEDCGGNTGRRGQGIAASCK*LTSKGV Trigger: CACGCCCTTGGAGGTTAATCATTTGCAGCTGGCTGC...TATCCCCTGCCCTCTTCTTCCTGTGTTTCCACCACAATCTTCAGGAAATGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCCAAGAAAAGGGATTTCCTGGAATGCTCGCGAGAAGCAGGAGGCCCTTGAAATTCAGCGATCTTTaGCACCCGGAACTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLQEKGFPGMLARSRRPLKFSDL*HPELPF Trigger: AAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTT...CAAGGGCCTCCTGCTTCTCGCGAGCATTCCAGGAAATCCCTTTTCTTGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR CCA 90 bp | TCACCTTCTCCAGCTTCTTTTAGGAATGAGCACTGCCTGCCCAATCTTCAAGTTGGTGGCTTGGGCTCATaGATGACAGCAGCTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSPASFRNEHCLPNLQVGGLGS*MTAAAD Trigger: GTCAGCAGCTGCTGTCATCCATGAGCCCAAGCCACC...AACTTGAAGATTGGGCAGGCAGTGCTCATTCCTAAAAGAAGCTGGAGAAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTTGAAGTCGGAGTGACTTCCATAATCCCTCCTGAAATAGCCTGTACCACTATGAGAGGGACGGTCTaGAAACCATCCTCCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVEVGVTSIIPPEIACTTMRGTV*KPSSTE Trigger: TTCCGTGGAGGATGGTTTCCAGACCGTCCCTCTCAT...AGTGGTACAGGCTATTTCAGGAGGGATTATGGAAGTCACTCCGACTTCAACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGCGGCGGCTTTGAAAATATCTTACATGGGAACAATCAACGCGAAACATGCGCCCTGCGTCTTGGGTaGCTTGGGCTCATGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISGGFENILHGNNQRETCALRLG*LGLMDD Trigger: GTCATCCATGAGCCCAAGCCACCCAAGACGCAGGGC...GCATGTTTCGCGTTGATTGTTCCCATGTAAGATATTTTCAAAGCCGCCGCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGTAATGCTGGATTTCCAACCCACTCTTCAGTCAGAGGCAAAGTCCAGCGGGGCTGGCAGTTTTaGGAGAGCCACCGTAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TNSNAGFPTHSSVRGKVQRGWQF*ESHRKF Trigger: GAATTTACGGTGGCTCTCCCAAAACTGCCAGCCCCG...CTGGACTTTGCCTCTGACTGAAGAGTGGGTTGGAAATCCAGCATTACTGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| 3UTR CAA 72 bp | AAACAAAAGAAAGACAACATCTATCCACGCCTGTGTTaGCTGAGGCACAACAGCCGCCCTGTGAGCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQKKDNIYPRLC*LRHNSRPVSIG Trigger: TCCGATGCTCACAGGGCGGCTGTTGTGCCTCAGCAAACACAGGCGTGGATAGATGTTGTCTTTCTTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR GCA 90 bp | CAAAATTATAAAGCGCTCTGTGGTTTTGCTAGGGAAGATTTGTTGATCCGTTTCCGATGGCCCGGGCAGTaGTCTGCTTGGCCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNYKALCGFAREDLLIRFRWPGQ*SAWPHC Trigger: ACAGTGTGGCCAAGCAGAGCACTGCCCGGGCCATCG...GAAACGGATCAACAAATCTTCCCTAGCAAAACCACAGAGCGCTTTATAATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR CCA 90 bp | ACCATAGCCAACCTAGCCACACAGAGAACTTTCAGGCAAGATTCAAAGGTCGAAATGAGAGGGACGGTCTaGAAACCATCCTCCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TIANLATQRTFRQDSKVEMRGTV*KPSSTE Trigger: TTCCGTGGAGGATGGTTTCCAGACCGTCCCTCTCAT...TTCGACCTTTGAATCTTGCCTGAAAGTTCTCTGTGTGGCTAGGTTGGCTATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| CDS-3UTR CCA 90 bp | ATAAGCGGCGGCTTTGAAAATATCTTACATGGGAACAATCAACGCGAAACATGCAATGGCCCTGCGTCTTaGGTGGCTTGGGCTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISGGFENILHGNNQRETCNGPAS*VAWAHG Trigger: TCCATGAGCCCAAGCCACCCAAGACGCAGGGCCATT...GCATGTTTCGCGTTGATTGTTCCCATGTAAGATATTTTCAAAGCCGCCGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTTGAAGTCGGAGTGACTTCCATAATCCCTCCTGAAATAGCCTGTACCACTAAATTCAGCGATCTTTaGCACCCGGAACTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVEVGVTSIIPPEIACTTKFSDL*HPELPF Trigger: AAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTT...AGTGGTACAGGCTATTTCAGGAGGGATTATGGAAGTCACTCCGACTTCAACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
||
| CDS-3UTR CCA 90 bp | GATACTAGCACAAACAGTAATGCTGGATTTCCAACCCACTCTTCAGTCAGAGGCTTCCTCTGTTCCGGCTaGTATTCTGTTCTTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTSTNSNAGFPTHSSVRGFLCSG*YSVLVF Trigger: GAAGACAAGAACAGAATACCAGCCGGAACAGAGGAA...GCCTCTGACTGAAGAGTGGGTTGGAAATCCAGCATTACTGTTTGTGCTAGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| CDS-3UTR CCA 90 bp | ACCATAGCCAACCTAGCCACACAGAGAACTTTCAGGCAAGATTCAAAGGTCGAAAAATTCAGCGATCTTTaGCACCCGGAACTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TIANLATQRTFRQDSKVEKFSDL*HPELPF Trigger: AAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTT...TTCGACCTTTGAATCTTGCCTGAAAGTTCTCTGTGTGGCTAGGTTGGCTATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| CDS-3UTR CCA 90 bp | CAAAATTATAAAGCGCTCTGTGGTTTTGCTAGGGAAGATTTGTTGATCCGTTTCATGAGAGGGACGGTCTaGAAACCATCCTCCACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNYKALCGFAREDLLIRFMRGTV*KPSSTE Trigger: TTCCGTGGAGGATGGTTTCCAGACCGTCCCTCTCAT...GAAACGGATCAACAAATCTTCCCTAGCAAAACCACAGAGCGCTTTATAATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | TATCTTACATGGGAACAATCAACGCGAAACATGCCTTaGTACACGAGCCTGACTTGGGTACGAAGCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLTWEQSTRNMP*YTSLTWVRSNN Trigger: ATTGTTGCTTCGTACCCAAGTCAGGCTCGTGTACAAAGGCATGTTTCGCGTTGATTGTTCCCATGTAAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | GAGGAGAAATCAGATGAGAGTATCTGGCAGGATGGTTaGAGATATACTATTCCTATTACCCAGCTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEKSDESIWQDG*RYTIPITQLLC Trigger: ACACAGCAGCTGGGTAATAGGAATAGTATATCTCAAACCATCCTGCCAGATACTCTCATCTGATTTCTCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | TTCCCGGCTGTCAGATTTCAACTAACTAGAATTCAATaGTCATTCCTGCTGTCATTAGCGCTTTGGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPAVRFQLTRIQ*SFLLSLALWGK Trigger: TTTTCCCCAAAGCGCTAATGACAGCAGGAATGACAATTGAATTCTAGTTAGTTGAAATCTGACAGCCGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| 3UTR CAA 72 bp | AATCAAAATATTGGAGAAGGAACAGCCATTGGCATTTaGACACAGAGAATGAACCTGCCAACAAATCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: NQNIGEGTAIGI*TQRMNLPTNHR Trigger: CCGGTGATTTGTTGGCAGGTTCATTCTCTGTGTCAAAATGCCAATGGCTGTTCCTTCTCCAATATTTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCTGCAGACCACAGGCAAACTGAACAGCCCACCCTTCGCCACGCAGTACACCCGGAACTTCCCTTaGTTCCTCTGTTCCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQTTGKLNSPPFATQYTRNFP*FLCSGW Trigger: CCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGT...GTACTGCGTGGCGAAGGGTGGGCTGTTCAGTTTGCCTGTGGTCTGCAGGAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS TCA 90 bp | AGAGTCCCTGCGCCACAGCAAGTGTCCCCTTCCATTCCATCCCACTaGGGAACTGACCGTAAATTCAGCGATCTTTGGCACCCGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RVPAPQQVSPSIPSH*GTDRKFSDLWHPEL Trigger: AAGTTCCGGGTGCCAAAGATCGCTGAATTTACGGTCAGTTCCTCAGTGGGATGGAATGGAAGGGGACACTTGCTGTGGCGCAGGGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
||
| CDS CCA 90 bp | GCGATCTTTGGCACCCGGAACTTCCCTTTGTTCCTCTGTTCCGGCTaGTATTCTGTTCTTGTCTTCACGATCACCTTCTCGGGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AIFGTRNFPLFLCSG*YSVLVFTITFSGAA Trigger: GGCTGCTCCCGAGAAGGTGATCGTGAAGACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCCAAAGATCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020537.9 ENSMUST00000093219.4 ENSMUST00000109409.8 |
||
| CDS-3UTR CAA 90 bp | AATGCCAACATCACCTTCCTCTCCAAATCAGCCTTGCCTGCCATCGCTGTGCTTTGCGTCTTGGGTGGCTaGGGCTCATGGATGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NANITFLSKSALPAIAVLCVLGG*GSWMTA Trigger: TGCTGTCATCCATGAGCCCAAGCCACCCAAGACGCA...AAGCACAGCGATGGCAGGCAAGGCTGATTTGGAGAGGAAGGTGATGTTGGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
||
| CDS TCA 90 bp | GTTCTTGTCTTCACGATCACCTTCTCGGGAGCAGCCAGCTGCAAATaGTTAACCTCCAAGGGCGTGATGAGAGGGACGGTCTGGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: VLVFTITFSGAASCK*LTSKGVMRGTVWKP Trigger: TGGTTTCCAGACCGTCCCTCTCATCACGCCCTTGGAGGTTAATCATTTGCAGCTGGCTGCTCCCGAGAAGGTGATCGTGAAGACAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020537.9 ENSMUST00000093219.4 ENSMUST00000109409.8 |
||
| CDS-3UTR CAA 90 bp | GAAGATTGTGGTGGAAACACAGGAAGAAGAGGGCAGGGGATAAATGAGAAGCTGACCCGGAACTTCCCTTaGTTCCTCTGTTCCGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: EDCGGNTGRRGQGINEKLTRNFP*FLCSGW Trigger: CCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGT...CAGCTTCTCATTTATCCCCTGCCCTCTTCTTCCTGTGTTTCCACCACAATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
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| CDS-3UTR CAA 90 bp | ACAGCCATTGGCATTTTGACACAGAGAATGAACCTGCCAACAAATCACCGGGAAACCCGGAACTTCCCTTaGTTCCTCTGTTCCGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: TAIGILTQRMNLPTNHRETRNFP*FLCSGW Trigger: CCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGT...TTCCCGGTGATTTGTTGGCAGGTTCATTCTCTGTGTCAAAATGCCAATGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| CDS-3UTR CAA 90 bp | GATACTAGCACAAACAGTAATGCTGGATTTCCAACCCACTCTTCAGTCAGAGGCTTTCTGTCTGTGTTGTaGATACCATATTTGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: DTSTNSNAGFPTHSSVRGFLSVL*IPYLKS Trigger: GGACTTCAAATATGGTATCAACAACACAGACAGAAA...GCCTCTGACTGAAGAGTGGGTTGGAAATCCAGCATTACTGTTTGTGCTAGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| CDS TCA 72 bp | AATGGCCCTGCGTCTTGGGTGGCTTGGGCTCATGGATaGCAGCAGCTGCTGACAGCCATGGCCCGATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NGPASWVAWAHG*QQLLTAMARWP Trigger: GGGCCATCGGGCCATGGCTGTCAGCAGCTGCTGTCATCCATGAGCCCAAGCCACCCAAGACGCAGGGCCATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| CDS TCA 72 bp | TTCACGATCACCTTCTCGGGAGCAGCCAGCTGCAAATaGTTAACCTCCAAGGGCGTGATGAGAGGGACGGTC | + |
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Preference number: 6 (lower is better) Translates to: FTITFSGAASCK*LTSKGVMRGTV Trigger: GACCGTCCCTCTCATCACGCCCTTGGAGGTTAATCATTTGCAGCTGGCTGCTCCCGAGAAGGTGATCGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020537.9 ENSMUST00000093219.4 ENSMUST00000109409.8 |
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| CDS TCA 72 bp | GCGCCACAGCAAGTGTCCCCTTCCATTCCATCCCACTaGGGAACTGACCGTAAATTCAGCGATCTTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: APQQVSPSIPSH*GTDRKFSDLWH Trigger: GTGCCAAAGATCGCTGAATTTACGGTCAGTTCCTCAGTGGGATGGAATGGAAGGGGACACTTGCTGTGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
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| CDS CCA 72 bp | GGCACCCGGAACTTCCCTTTGTTCCTCTGTTCCGGCTaGTATTCTGTTCTTGTCTTCACGATCACCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: GTRNFPLFLCSG*YSVLVFTITFS Trigger: CGAGAAGGTGATCGTGAAGACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020537.9 ENSMUST00000093219.4 ENSMUST00000109409.8 |
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| CDS CCA 72 bp | CAGTTTTGGGAGAGCCACCGTAAATTCAGCGATCTTTaGCACCCGGAACTTCCCTTTGTTCCTCTGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: QFWESHRKFSDL*HPELPFVPLFR Trigger: CCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTTACGGTGGCTCTCCCAAAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| CDS CAA 72 bp | TCCCTTTGTTCCTCTGTTCCGGCTGGTATTCTGTTCTaGTCTTCACGATCACCTTCTCGGGAGCAGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLCSSVPAGILF*SSRSPSREQPA Trigger: AGCTGGCTGCTCCCGAGAAGGTGATCGTGAAGACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020537.9 ENSMUST00000093219.4 ENSMUST00000109409.8 |
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| CDS CAA 90 bp | CCCGGAACTTCCCTTTGTTCCTCTGTTCCGGCTGGTATTCTGTTCTaGTCTTCACGATCACCTTCTCGGGAGCAGCCAGCTGCAAATGAT | + |
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Preference number: 6 (lower is better) Translates to: PGTSLCSSVPAGILF*SSRSPSREQPAAND Trigger: ATCATTTGCAGCTGGCTGCTCCCGAGAAGGTGATCGTGAAGACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020537.9 ENSMUST00000093219.4 ENSMUST00000109409.8 |
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| CDS CCA 72 bp | GCTGACAAGAATGGTGACCGTAAATTCAGCGATCTTTaGCACCCGGAACTTCCCTTTGTTCCTCTGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: ADKNGDRKFSDL*HPELPFVPLFR Trigger: CCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTTACGGTCACCATTCTTGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| CDS CAA 90 bp | AGAGCCACCGTAAATTCAGCGATCTTTGGCACCCGGAACTTCCCTTaGTTCCTCTGTTCCGGCTGGTATTCTGTTCTTGTCTTCACGATC | + |
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Preference number: 6 (lower is better) Translates to: RATVNSAIFGTRNFP*FLCSGWYSVLVFTI Trigger: GATCGTGAAGACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTTACGGTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093219.4 |
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| CDS CAA 90 bp | ATGGTGACCGTAAATTCAGCGATCTTTGGCACCCGGAACTTCCCTTaGTTCCTCTGTTCCGGCTGGTATTCTGTTCTTGTCTTCACGATC | + |
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Preference number: 6 (lower is better) Translates to: MVTVNSAIFGTRNFP*FLCSGWYSVLVFTI Trigger: GATCGTGAAGACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTTACGGTCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020537.9 |
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| CDS CAA 90 bp | GAACTGACCGTAAATTCAGCGATCTTTGGCACCCGGAACTTCCCTTaGTTCCTCTGTTCCGGCTGGTATTCTGTTCTTGTCTTCACGATC | + |
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Preference number: 6 (lower is better) Translates to: ELTVNSAIFGTRNFP*FLCSGWYSVLVFTI Trigger: GATCGTGAAGACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTTACGGTCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109409.8 |
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| CDS CAA 72 bp | GTAAATTCAGCGATCTTTGGCACCCGGAACTTCCCTTaGTTCCTCTGTTCCGGCTGGTATTCTGTTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VNSAIFGTRNFP*FLCSGWYSVLV Trigger: GACAAGAACAGAATACCAGCCGGAACAGAGGAACAAAGGGAAGTTCCGGGTGCCAAAGATCGCTGAATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020537.9 ENSMUST00000093219.4 ENSMUST00000109409.8 |
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