Pregenerated sensors for NSG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029126Ensembl transcript IDs: ENSMUST00000031009.8, ENSMUST00000201134.2, ENSMUST00000201341.2, ENSMUST00000201363.4, ENSMUST00000201415.4, ENSMUST00000202129.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAATTGCCTGGCAGGGCTGCGTCGTGGTGCCCACGTCCCCTTCTCTaGGCCGCTCAACAGTGCATGTTGACAGTCAGCACTGCCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: ELPGRAASWCPRPLL*AAQQCMLTVSTATS Trigger: GCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGGACGTGGGCACCACGACGCAGCCCTGCCAGGCAATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR GCA 90 bp | GCTGCGTCGTGGTGCCCACGTCCCCTTCTCTGCGCCGCTCAACAGTaGATGTTGACAGTCAGCACTGCCACCAGCAAAAGCACGGGATCA | + |
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Preference number: 1 (lower is better) Translates to: AASWCPRPLLCAAQQ*MLTVSTATSKSTGS Trigger: TGATCCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGGACGTGGGCACCACGACGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR TCA 90 bp | CGTGGTGCCCACGTCCCCTTCTCTGCGCCGCTCAACAGTGCATGTTaGCAGTCAGCACTGCCACCAGCAAAAGCACGGGATCACTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: RGAHVPFSAPLNSAC*QSALPPAKARDHSR Trigger: TCTAGAGTGATCCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGGACGTGGGCACCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR GCA 90 bp | TCCCCTTCTCTGCGCCGCTCAACAGTGCATGTTGACAGTCAGCACTaGCACCAGCAAAAGCACGGGATCACTCTAGATATGGCTATGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPSLRRSTVHVDSQH*HQQKHGITLDMAME Trigger: CTCCATAGCCATATCTAGAGTGATCCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR GCA 90 bp | CAGTGGGTAAAGGGCTACGTTAGAAAACACAGAGGGCCTGCCTACTaGACGCACACGGCCCATGAGTCGGATCCCTCTACAGACAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: QWVKGYVRKHRGPAY*THTAHESDPSTDKF Trigger: AAACTTGTCTGTAGAGGGATCCGACTCATGGGCCGTGTGCGTGCAGTAGGCAGGCCCTCTGTGTTTTCTAACGTAGCCCTTTACCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR TCA 90 bp | GACCCCTGGCATAGCCAGTGTAGATTACCTTTTGACAGTATCCAGTaGATCCCAGGGAAGGAGCTAAATGAAGACTCCTCAGCGTGGACA | + |
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Preference number: 1 (lower is better) Translates to: DPWHSQCRLPFDSIQ*IPGKELNEDSSAWT Trigger: TGTCCACGCTGAGGAGTCTTCATTTAGCTCCTTCCCTGGGATTCACTGGATACTGTCAAAAGGTAATCTACACTGGCTATGCCAGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 ENSMUST00000202129.2 |
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| 3UTR TCA 90 bp | CATGATGTTGTCTCAGTAGCACACCTCAGGAAGCAGCAGTGGAGCTaGTGGTGGCCACCATGCTTGTTCACAAAGGTCTCAGACTATTTG | + |
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Preference number: 1 (lower is better) Translates to: HDVVSVAHLRKQQWS*WWPPCLFTKVSDYL Trigger: CAAATAGTCTGAGACCTTTGTGAACAAGCATGGTGGCCACCATCAGCTCCACTGCTGCTTCCTGAGGTGTGCTACTGAGACAACATCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR CCA 90 bp | TCCAGCTCTCTAAGCAATGCTGAGATGCTCTTGTTCTTACGCCTGTaGGTGGTCCGCAGCAAGTTTAATTTGCAAAGCAGCATTAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SSSLSNAEMLLFLRL*VVRSKFNLQSSISK Trigger: TTTGCTAATGCTGCTTTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGAGCATCTCAGCATTGCTTAGAGAGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
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| 3UTR CCA 90 bp | GGCTGTACGTGCAAATATATTCATAACAGGAAAGAAAAGAACCAGTaGGCTTTCTTCCTACCTAGCACATTACCAGCAGACAGCCCACCC | + |
|
Preference number: 1 (lower is better) Translates to: GCTCKYIHNRKEKNQ*AFFLPSTLPADSPP Trigger: GGGTGGGCTGTCTGCTGGTAATGTGCTAGGTAGGAAGAAAGCCCACTGGTTCTTTTCTTTCCTGTTATGAATATATTTGCACGTACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR GCA 90 bp | TGCTCTTGTTCTTACGCCTGTGGGTGGTCCGCAGCAAGTTTAATTTaGAAAGCAGCATTAGCAAACAGAAGCAATTGCACCGTAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: CSCSYACGWSAASLI*KAALANRSNCTVNE Trigger: CTCATTTACGGTGCAATTGCTTCTGTTTGCTAATGCTGCTTTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGACAGCCCACCCACAGAGAAACAGGCTCGGCGACCCCCTAGCCCAGAGCCTCAACAGTGCATGTTaGCAGTCAGCACTGCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: QQTAHPQRNRLGDPLAQSLNSAC*QSALPP Trigger: TGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAG...GCTCTGGGCTAGGGGGTCGCCGAGCCTGTTTCTCTGTGGGTGGGCTGTCTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGATGGTGGCCACCATGCTTGTTCACAAAGGTCTCAGACTATTTGCCATCCCCACCAGCCGTCCTaGCCCTTCCCACAGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: GADGGHHACSQRSQTICHPHQPS*PFPQHR Trigger: CCTGTGCTGTGGGAAGGGGCAGGACGGCTGGTGGGG...ATGGCAAATAGTCTGAGACCTTTGTGAACAAGCATGGTGGCCACCATCAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAAACACAGAGGGCCTGCCTACTGCACGCACACGGCCCATGAGTCGGATCCCCCGAGACTTCTGACATaGCCACCAGAAACAACACAT | + |
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Preference number: 2 (lower is better) Translates to: RKHRGPAYCTHTAHESDPPRLLT*PPETTH Trigger: ATGTGTTGTTTCTGGTGGGCATGTCAGAAGTCTCGG...GGGATCCGACTCATGGGCCGTGTGCGTGCAGTAGGCAGGCCCTCTGTGTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAAACACAGAGGGCCTGCCTACTGCACGCACACGGCCCATGAGTCGGATCCCTTGGCACATGTGTATTaGTCTTTGCGCATTCCTCGC | + |
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Preference number: 2 (lower is better) Translates to: RKHRGPAYCTHTAHESDPLAHVY*SLRIPR Trigger: GCGAGGAATGCGCAAAGAGCAATACACATGTGCCAA...GGGATCCGACTCATGGGCCGTGTGCGTGCAGTAGGCAGGCCCTCTGTGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACATACCAAAGAGAACCTCCCAGAATTGCCTGGCAGGGCTGCGTCGTGGTGTTTGACAGTATCCAGTaGATCCCAGGGAAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: GTYQREPPRIAWQGCVVVFDSIQ*IPGKEL Trigger: TAGCTCCTTCCCTGGGATTCACTGGATACTGTCAAA...CACCACGACGCAGCCCTGCCAGGCAATTCTGGGAGGTTCTCTTTGGTATGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR CAA 90 bp | GCGTGGACAGTGGCATCCAGCTCTCTAAGCAATGCTGAGATGCTCTaGTTCTTACGCCTGTGGGTGGTCCGCAGCAAGTTTAATTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AWTVASSSLSNAEML*FLRLWVVRSKFNLQ Trigger: TTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGAGCATCTCAGCATTGCTTAGAGAGCTGGATGCCACTGTCCACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAGCACTGCCACCAGCAAAAGCACGGGATCACTCTAGATATGGCTATGGACTCTCTAAGCAATGCTaGGATGCTCTTGTTCTTACG | + |
|
Preference number: 2 (lower is better) Translates to: QSALPPAKARDHSRYGYGLSKQC*DALVLT Trigger: CGTAAGAACAAGAGCATCTCAGCATTGCTTAGAGAG...TCCATAGCCATATCTAGAGTGATCCCGTGCTTTTGCTGGTGGCAGTGCTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCTCTTGTTCTTACGCCTGTGGGTGGTCCGCAGCAAGTTTAATTTGCAAAGCTCAAAGTCCCCTTGTTaGCTTCAAGTGACACATCGT | + |
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Preference number: 2 (lower is better) Translates to: MLLFLRLWVVRSKFNLQSSKSPC*LQVTHR Trigger: ACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGA...GCTTTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
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| 3UTR-3UTR GCA 90 bp | TGCATTCAGGGCTGTACGTGCAAATATATTCATAACAGGAAAGAAAAGAACCAGGTTGACAGTCAGCACTaGCACCAGCAAAAGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: CIQGCTCKYIHNRKEKNQVDSQH*HQQKHG Trigger: CCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAAC...CTGGTTCTTTTCTTTCCTGTTATGAATATATTTGCACGTACAGCCCTGAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTACAAAGATTGTGGACTTAGATATTCTATTTGCAAGGTGCCACATCAGCCCCCCATCCTTGTGCTCTaGTCAGGGGACATACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SYKDCGLRYSICKVPHQPPILVL*SGDIPK Trigger: CTTTGGTATGTCCCCTGAGCAGAGCACAAGGATGGG...GGGCTGATGTGGCACCTTGCAAATAGAATATCTAAGTCCACAATCTTTGTAAGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR-3UTR TCA 90 bp | CACGAGCTCTTTATTTGTAGAGTAAAAATGAGAAATTACATTGGGAGAGTTCACTTTGACAGTATCCAGTaGATCCCAGGGAAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: HELFICRVKMRNYIGRVHFDSIQ*IPGKEL Trigger: TAGCTCCTTCCCTGGGATTCACTGGATACTGTCAAA...GTGAACTCTCCCAATGTAATTTCTCATTTTTACTCTACAAATAAAGAGCTCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR GCA 72 bp | AACCTCCCAGAATTGCCTGGCAGGGCTGCGTCGTGGTaGCCACGTCCCCTTCTCTGCGCCGCTCAACAGTGC | + |
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Preference number: 3 (lower is better) Translates to: NLPELPGRAASW*PRPLLCAAQQC Trigger: GCACTGTTGAGCGGCGCAGAGAAGGGGACGTGGGCACCACGACGCAGCCCTGCCAGGCAATTCTGGGAGGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR CCA 72 bp | CAGGGGACATACCAAAGAGAACCTCCCAGAATTGCCTaGCAGGGCTGCGTCGTGGTGCCCACGTCCCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: QGTYQREPPRIA*QGCVVVPTSPS Trigger: AGAAGGGGACGTGGGCACCACGACGCAGCCCTGCCAGGCAATTCTGGGAGGTTCTCTTTGGTATGTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR GCA 72 bp | TGGTGCCCACGTCCCCTTCTCTGCGCCGCTCAACAGTaGATGTTGACAGTCAGCACTGCCACCAGCAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: WCPRPLLCAAQQ*MLTVSTATSKS Trigger: GCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGGACGTGGGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR TCA 72 bp | CACGTCCCCTTCTCTGCGCCGCTCAACAGTGCATGTTaGCAGTCAGCACTGCCACCAGCAAAAGCACGGGAT | + |
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Preference number: 3 (lower is better) Translates to: HVPFSAPLNSAC*QSALPPAKARD Trigger: ATCCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGGACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR TCA 72 bp | GCATTCCTCGCAGCTTTCCAATGCACTTCAAGCTCGTaGCTGTGTGGCCCCTCCCCCTGTGCTGAGCTCATG | + |
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Preference number: 3 (lower is better) Translates to: AFLAAFQCTSSS*LCGPSPCAELM Trigger: CATGAGCTCAGCACAGGGGGAGGGGCCACACAGTCACGAGCTTGAAGTGCATTGGAAAGCTGCGAGGAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR GCA 72 bp | AAGGGCTACGTTAGAAAACACAGAGGGCCTGCCTACTaGACGCACACGGCCCATGAGTCGGATCCCTCTACA | + |
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Preference number: 3 (lower is better) Translates to: KGYVRKHRGPAY*THTAHESDPST Trigger: TGTAGAGGGATCCGACTCATGGGCCGTGTGCGTGCAGTAGGCAGGCCCTCTGTGTTTTCTAACGTAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR CCA 72 bp | ATCCCAGGGAAGGAGCTAAATGAAGACTCCTCAGCGTaGACAGTGGCATCCAGCTCTCTAAGCAATGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: IPGKELNEDSSA*TVASSSLSNAE Trigger: CTCAGCATTGCTTAGAGAGCTGGATGCCACTGTCCACGCTGAGGAGTCTTCATTTAGCTCCTTCCCTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 ENSMUST00000202129.2 |
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| 3UTR CCA 72 bp | CTAAGCAATGCTGAGATGCTCTTGTTCTTACGCCTGTaGGTGGTCCGCAGCAAGTTTAATTTGCAAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LSNAEMLLFLRL*VVRSKFNLQSS Trigger: GCTGCTTTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGAGCATCTCAGCATTGCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
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| 3UTR GCA 72 bp | TCTTACGCCTGTGGGTGGTCCGCAGCAAGTTTAATTTaGAAAGCAGCATTAGCAAACAGAAGCAATTGCACC | + |
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Preference number: 3 (lower is better) Translates to: SYACGWSAASLI*KAALANRSNCT Trigger: GGTGCAATTGCTTCTGTTTGCTAATGCTGCTTTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
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| 3UTR-3UTR CAA 90 bp | TCAGCACTGCCACCAGCAAAAGCACGGGATCACTCTAGATATGGCTATGGAGTACGCAGCAAGTTTAATTaGCAAAGCAGCATTAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SALPPAKARDHSRYGYGVRSKFN*QSSISK Trigger: TTTGCTAATGCTGCTTTGCAAATTAAACTTGCTGCG...TACTCCATAGCCATATCTAGAGTGATCCCGTGCTTTTGCTGGTGGCAGTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR GCA 72 bp | TCTACAGACAAGTTTTGGCACATGTGTATTGCTCTTTaGGCATTCCTCGCAGCTTTCCAATGCACTTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: STDKFWHMCIAL*AFLAAFQCTSS Trigger: GCTTGAAGTGCATTGGAAAGCTGCGAGGAATGCGCAAAGAGCAATACACATGTGCCAAAACTTGTCTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR TCA 72 bp | CATAGCCAGTGTAGATTACCTTTTGACAGTATCCAGTaGATCCCAGGGAAGGAGCTAAATGAAGACTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: HSQCRLPFDSIQ*IPGKELNEDSS Trigger: TGAGGAGTCTTCATTTAGCTCCTTCCCTGGGATTCACTGGATACTGTCAAAAGGTAATCTACACTGGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 ENSMUST00000202129.2 |
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| 3UTR TCA 72 bp | CTCATGCCCTTTGTTTTAGAACACCTCAACAATACATaGTGTTGTCTCAGTAGCACACCTCAGGAAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LMPFVLEHLNNT*CCLSSTPQEAA Trigger: TGCTGCTTCCTGAGGTGTGCTACTGAGACAACATCATGTATTGTTGAGGTGTTCTAAAACAAAGGGCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR CCA 72 bp | AGTAAAAATGAGAAATTACATTGGGAGAGTTCACAGTaGGTAAAGGGCTACGTTAGAAAACACAGAGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SKNEKLHWESSQ*VKGYVRKHRGP Trigger: AGGCCCTCTGTGTTTTCTAACGTAGCCCTTTACCCACTGTGAACTCTCCCAATGTAATTTCTCATTTTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR TCA 72 bp | GAGACTTCTGACATGCCCACCAGAAACAACACATTCTaGGAACATGGAAGAAAACAATCAGGAATAGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: ETSDMPTRNNTF*EHGRKQSGIAF Trigger: AAAAGCTATTCCTGATTGTTTTCTTCCATGTTCTCAGAATGTGTTGTTTCTGGTGGGCATGTCAGAAGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR CCA 72 bp | TGCAAATATATTCATAACAGGAAAGAAAAGAACCAGTaGGCTTTCTTCCTACCTAGCACATTACCAGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: CKYIHNRKEKNQ*AFFLPSTLPAD Trigger: GTCTGCTGGTAATGTGCTAGGTAGGAAGAAAGCCCACTGGTTCTTTTCTTTCCTGTTATGAATATATTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGACAGCCCACCCACAGAGAAACAGGCTCGGCGACCCCCTAGCCCAGAGCGGTGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: QQTAHPQRNRLGDPLAQSGGNCS*LTSRGV Trigger: GACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACC...GCTCTGGGCTAGGGGGTCGCCGAGCCTGTTTCTCTGTGGGTGGGCTGTCTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| CDS-3UTR CCA 90 bp | GCAGACAGCCCACCCACAGAGAAACAGGCTCGGCGACCCCCTAGCCCAGAGCCACACCACGACCTTATCTaGGGGTGGGAACTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ADSPPTEKQARRPPSPEPHHDLI*GWELQL Trigger: CAGCTGCAGTTCCCACCCCCAGATAAGGTCGTGGTG...TGGCTCTGGGCTAGGGGGTCGCCGAGCCTGTTTCTCTGTGGGTGGGCTGTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| 3UTR CAA 72 bp | CTGCTCAGGGGACATACCAAAGAGAACCTCCCAGAATaGCCTGGCAGGGCTGCGTCGTGGTGCCCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LLRGHTKENLPE*PGRAASWCPRP Trigger: GGGACGTGGGCACCACGACGCAGCCCTGCCAGGCAATTCTGGGAGGTTCTCTTTGGTATGTCCCCTGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| 3UTR CAA 72 bp | CCACGTCCCCTTCTCTGCGCCGCTCAACAGTGCATGTaGACAGTCAGCACTGCCACCAGCAAAAGCACGGGA | + |
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Preference number: 4 (lower is better) Translates to: PRPLLCAAQQCM*TVSTATSKSTG Trigger: TCCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGGACGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| CDS-3UTR TCA 90 bp | GCTCAACAGTGCATGTTGACAGTCAGCACTGCCACCAGCAAAAGCACGGGATCAGCGACACGGAGCGGGTaGTGCTCTGCTTGGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: AQQCMLTVSTATSKSTGSATRSG*CSAWPR Trigger: ACGTGGCCAAGCAGAGCATCACCCGCTCCGTGTCGC...TGATCCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
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| CDS-3UTR TCA 90 bp | TCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGCTCGCGACACGGAGCGGGTaGTGCTCTGCTTGGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: SKSPCCLQVTHRKEPALLATRSG*CSAWPR Trigger: ACGTGGCCAAGCAGAGCATCACCCGCTCCGTGTCGC...GAGCAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS-3UTR TCA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCGCGACACGGAGCGGGTaGTGCTCTGCTTGGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: CPSKSPCCLQVTHRKEPAATRSG*CSAWPR Trigger: ACGTGGCCAAGCAGAGCATCACCCGCTCCGTGTCGC...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS-3UTR CCA 90 bp | CCCCTTCTCTGCGCCGCTCAACAGTGCATGTTGACAGTCAGCACTGCCACCAGCATTTCTCCCGGGCACTaGAGTCTTGCTCCGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PLLCAAQQCMLTVSTATSISPGH*SLAPCS Trigger: ACTACACGGAGCAAGACTCCAGTGCCCGGGAGAAAT...GCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| CDS-3UTR GCA 90 bp | CCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGTCCTCCAGCAGTGGCTaGTTGGTGCCCTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSKSPCCLQVTHRKEPALSSSSG*LVPFSA Trigger: CGCAGAGAAGGGCACCAAGCAGCCACTGCTGGAGGA...CAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | AGAAAACACAGAGGGCCTGCCTACTGCACGCACACGGCCCATGAGTCGGATCCCCCAAGCCTTCTGGGATaGACTGGGTGTTCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKHRGPAYCTHTAHESDPPSLLG*TGCSSR Trigger: TCTTGAAGAACACCCAGTGCATCCCAGAAGGCTTGG...GGGATCCGACTCATGGGCCGTGTGCGTGCAGTAGGCAGGCCCTCTGTGTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCTCCTCCAGCAGTGGCTaGTTGGTGCCCTTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CPSKSPCCLQVTHRKEPASSSSG*LVPFSA Trigger: CGCAGAGAAGGGCACCAAGCAGCCACTGCTGGAGGA...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | CTGCGCCGCTCAACAGTGCATGTTGACAGTCAGCACTGCCACCAGCAAAAGCACGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRSTVHVDSQHCHQQKHALQAF*DALGVL Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...GTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGCTCGGAAGACGACACAGGTaGGGAAGGCCAGGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKSPCCLQVTHRKEPALLGRRHR*GRPGQR Trigger: TCTTTGCCCTGGCCTTCCTCACCTGTGTCGTCTTCC...GAGCAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCTCTGCGCCGCTCAACAGTGCATGTTGACAGTCAGCACTGCCACCAGCCTTGGTGCCCTTCTCTaGGAAATTATTCCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLCAAQQCMLTVSTATSLGALL*EIIPQL Trigger: AAGTTGGGGAATAATTTCGCAGAGAAGGGCACCAAG...GCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCTCTGGGGGTGGGAACTaGAGCTGGTTGACATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSKSPCCLQVTHRKEPASGGGN*SWLTSR Trigger: CCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGA...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGCTCTCTGGGGGTGGGAACTaGAGCTGGTTGACATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKSPCCLQVTHRKEPALLSGGGN*SWLTSR Trigger: CCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGA...GAGCAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTGCCACCAGCAAAAGCACGGGATCACTCTAGATATGGCTATGGAGTAGGAACTGCAGCTGGTTaGCATCGAGGGGCGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SALPPAKARDHSRYGYGVGTAAG*HRGASS Trigger: TGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCC...TACTCCATAGCCATATCTAGAGTGATCCCGTGCTTTTGCTGGTGGCAGTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAAGCGACACGGAGCGGGTaGTGCTCTGCTTGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: MKCPSKSPCCLQVTHRKEATRSG*CSAWPR Trigger: ACGTGGCCAAGCAGAGCATCACCCGCTCCGTGTCGC...TTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCGACCTTATCTGGGGGTaGGAACTGCAGCTGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPSKSPCCLQVTHRKEPADLIWG*ELQLVD Trigger: GTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTC...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| 3UTR CAA 72 bp | GTGGCATCCAGCTCTCTAAGCAATGCTGAGATGCTCTaGTTCTTACGCCTGTGGGTGGTCCGCAGCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VASSSLSNAEML*FLRLWVVRSKF Trigger: AAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGAGCATCTCAGCATTGCTTAGAGAGCTGGATGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
||
| CDS-3UTR TCA 90 bp | TCTTGTTCTTACGCCTGTGGGTGGTCCGCAGCAAGTTTAATTTGCAAAGCAGCAGGAACTGCAGCTGGTTaGCATCGAGGGGCGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSYACGWSAASLICKAAGTAAG*HRGASS Trigger: TGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCC...TGCTGCTTTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
||
| CDS-3UTR TCA 90 bp | CCCCTTCTCTGCGCCGCTCAACAGTGCATGTTGACAGTCAGCACTGCCACCAGCCGTTGTAGTGGTTTATaGCAGTGTAAAATTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLCAAQQCMLTVSTATSRCSGL*QCKISP Trigger: GGGAGAAATTTTACACTGTCATAAACCACTACAACG...GCTGGTGGCAGTGCTGACTGTCAACATGCACTGTTGAGCGGCGCAGAGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000202129.2 |
||
| CDS-3UTR CCA 90 bp | CCACCAGCAAAAGCACGGGATCACTCTAGATATGGCTATGGAGTAAGGTCTGCAGACCTTATCTGGGGGTaGGAACTGCAGCTGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPAKARDHSRYGYGVRSADLIWG*ELQLVD Trigger: GTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTC...TGCAGACCTTACTCCATAGCCATATCTAGAGTGATCCCGTGCTTTTGCTGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGCTCATTTCTCCCGGGCACTaGAGTCTTGCTCCGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKSPCCLQVTHRKEPALLISPGH*SLAPCS Trigger: ACTACACGGAGCAAGACTCCAGTGCCCGGGAGAAAT...GAGCAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCCAAGCCTTCTGGGATaGACTGGGTGTTCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPSKSPCCLQVTHRKEPAPSLLG*TGCSSR Trigger: TCTTGAAGAACACCCAGTGCATCCCAGAAGGCTTGG...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCGCGTCATCAAAGGAATaGTGTCGAAGCCATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPSKSPCCLQVTHRKEPAASSKE*CRSHPP Trigger: TGGAGGATGGCTTCGACACCATTCCTTTGATGACGC...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGCCTTCTGGGATGCACTaGGTGTTCTTCAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSKSPCCLQVTHRKEPALPSGMH*VFFKTN Trigger: GTTTGTCTTGAAGAACACCCAGTGCATCCCAGAAGG...CAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | CCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGCTTGGTGCCCTTCTCTaGGAAATTATTCCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PSKSPCCLQVTHRKEPALLGALL*EIIPQL Trigger: AAGTTGGGGAATAATTTCGCAGAGAAGGGCACCAAG...CAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | ATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAATCTGGGGGTGGGAACTaGAGCTGGTTGACATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MKCPSKSPCCLQVTHRKESGGGN*SWLTSR Trigger: CCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGA...TTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTTGGTGCCCTTCTCTaGGAAATTATTCCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CPSKSPCCLQVTHRKEPALGALL*EIIPQL Trigger: AAGTTGGGGAATAATTTCGCAGAGAAGGGCACCAAG...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| 3UTR CAA 72 bp | CGGATCCCTCTACAGACAAGTTTTGGCACATGTGTATaGCTCTTTGCGCATTCCTCGCAGCTTTCCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RIPLQTSFGTCV*LFAHSSQLSNA Trigger: TGCATTGGAAAGCTGCGAGGAATGCGCAAAGAGCAATACACATGTGCCAAAACTTGTCTGTAGAGGGATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR TCA 90 bp | TCTTACAAAGATTGTGGACTTAGATATTCTATTTGCAAGGTGCCACATCAGCCCGGAAGACGACACAGGTaGGGAAGGCCAGGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYKDCGLRYSICKVPHQPGRRHR*GRPGQR Trigger: TCTTTGCCCTGGCCTTCCTCACCTGTGTCGTCTTCC...GGGCTGATGTGGCACCTTGCAAATAGAATATCTAAGTCCACAATCTTTGTAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCACAGGAGTCACATCTGTTCACAGAAGAAAAGCTAAAGTAGCCCTGGCTCCTTCTGGGATGCACTaGGTGTTCTTCAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSTGVTSVHRRKAKVALAPSGMH*VFFKTN Trigger: GTTTGTCTTGAAGAACACCCAGTGCATCCCAGAAGG...AGCCAGGGCTACTTTAGCTTTTCTTCTGTGAACAGATGTGACTCCTGTGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAAGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MKCPSKSPCCLQVTHRKEALQAF*DALGVL Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...TTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | ATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGCACGGAGACCTTATCTaGGGGTGGGAACTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFNEMSLKVPLLPSSDTSHGDLI*GWELQL Trigger: CAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCGTG...CGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | GTAATTATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACGGTGGGAACTGCAGCTaGTTGACATCGAGGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VIIFNEMSLKVPLLPSSDGGNCS*LTSRGV Trigger: GACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACC...GTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATATAATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | ATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGGACCTTATCTGGGGGTaGGAACTGCAGCTGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IFNEMSLKVPLLPSSDTSDLIWG*ELQLVD Trigger: GTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTC...CGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGATGGTGGCCACCATGCTTGTTCACAAAGGTCTCAGACTATTTGCCATCGTTGTAGTGGTTTATaGCAGTGTAAAATTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GADGGHHACSQRSQTICHRCSGL*QCKISP Trigger: GGGAGAAATTTTACACTGTCATAAACCACTACAACG...ATGGCAAATAGTCTGAGACCTTTGTGAACAAGCATGGTGGCCACCATCAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFNEMSLKVPLLPSSDTSALQAF*DALGVL Trigger: AAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGC...CGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | ATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGATTTCTCCCGGGCACTaGAGTCTTGCTCCGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFNEMSLKVPLLPSSDTSISPGH*SLAPCS Trigger: ACTACACGGAGCAAGACTCCAGTGCCCGGGAGAAAT...CGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| 3UTR CAA 72 bp | CTCTACAGACAAGTTTTGGCACATGTGTATTGCTCTTaGCGCATTCCTCGCAGCTTTCCAATGCACTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYRQVLAHVYCS*RIPRSFPMHFK Trigger: CTTGAAGTGCATTGGAAAGCTGCGAGGAATGCGCAAAGAGCAATACACATGTGCCAAAACTTGTCTGTAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR TCA 90 bp | TTATCGGTAATTATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAGGAACTGCAGCTGGTTaGCATCGAGGGGCGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVIIFNEMSLKVPLLPSGTAAG*HRGASS Trigger: TGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCC...TGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATATAATTACCGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | TCTTACAAAGATTGTGGACTTAGATATTCTATTTGCAAGGTGCCACATCAGCCCGCGTCATCAAAGGAATaGTGTCGAAGCCATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYKDCGLRYSICKVPHQPASSKE*CRSHPP Trigger: TGGAGGATGGCTTCGACACCATTCCTTTGATGACGC...GGGCTGATGTGGCACCTTGCAAATAGAATATCTAAGTCCACAATCTTTGTAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGGCGTCATCAAAGGAATaGTGTCGAAGCCATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFNEMSLKVPLLPSSDTSASSKE*CRSHPP Trigger: TGGAGGATGGCTTCGACACCATTCCTTTGATGACGC...CGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CCA 90 bp | TTATCGGTAATTATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCACACCACGACCTTATCTaGGGGTGGGAACTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSVIIFNEMSLKVPLLPSHHDLI*GWELQL Trigger: CAGCTGCAGTTCCCACCCCCAGATAAGGTCGTGGTG...TGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATATAATTACCGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 |
||
| CDS-3UTR CCA 90 bp | ATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGCCTTCTGGGATGCACTaGGTGTTCTTCAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IFNEMSLKVPLLPSSDTSPSGMH*VFFKTN Trigger: GTTTGTCTTGAAGAACACCCAGTGCATCCCAGAAGG...CGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR GCA 90 bp | TTATCGGTAATTATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCACCAAGCCTTCTGGGATaGACTGGGTGTTCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSVIIFNEMSLKVPLLPSPSLLG*TGCSSR Trigger: TCTTGAAGAACACCCAGTGCATCCCAGAAGGCTTGG...TGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATATAATTACCGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR TCA 90 bp | TTATCGGTAATTATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCACGTTGTAGTGGTTTATaGCAGTGTAAAATTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVIIFNEMSLKVPLLPSRCSGL*QCKISP Trigger: GGGAGAAATTTTACACTGTCATAAACCACTACAACG...TGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATATAATTACCGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGACAGCCCACCCACAGAGAAACAGGCTCGGCGACCCCCTAGCCCAGAGGTGAACTCGGCTATCTaGGGAGGACGTGCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PADSPPTEKQARRPPSPEVNSAI*GGRAFP Trigger: AGGAAAAGCACGTCCTCCCAAGATAGCCGAGTTCAC...CTCTGGGCTAGGGGGTCGCCGAGCCTGTTTCTCTGTGGGTGGGCTGTCTGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
||
| CDS CCA 90 bp | CCGGGCACTGGAGTCTTGCTCCGTGTAGTAGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTTCAAGACAAACCCATCAGGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGTGVLLRVVALQAF*DALGVLQDKPIRAG Trigger: GCCTGCCCTGATGGGTTTGTCTTGAAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGCTACTACACGGAGCAAGACTCCAGTGCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
||
| CDS CCA 90 bp | AAGAGGACCAGCACGGAGACCTTATCTGGGGGTGGGAACTGCAGCTaGTTGACATCGAGGGGCGTCATCAAAGGAATGGTGTCGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRTSTETLSGGGNCS*LTSRGVIKGMVSKP Trigger: TGGCTTCGACACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCGTGCTGGTCCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
||
| CDS-3UTR CAA 90 bp | CCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCTGCCGGGCACTGGAGTCTaGCTCCGTGTAGTAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSKSPCCLQVTHRKEPALPGTGV*LRVVAL Trigger: GAGAGCTACTACACGGAGCAAGACTCCAGTGCCCGG...CAGGGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS-3UTR CAA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCGGGAACTGCAGCTGGTaGACATCGAGGGGCGTCATC | + |
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Preference number: 5 (lower is better) Translates to: CPSKSPCCLQVTHRKEPAGNCSW*TSRGVI Trigger: GATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCC...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS-3UTR CAA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCCGGGCACTGGAGTCTaGCTCCGTGTAGTAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: CPSKSPCCLQVTHRKEPAPGTGV*LRVVAL Trigger: GAGAGCTACTACACGGAGCAAGACTCCAGTGCCCGG...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS-3UTR CAA 90 bp | CATGTTGACAGTCAGCACTGCCACCAGCAAAAGCACGGGATCACTCTAGATATGGGGAACTGCAGCTGGTaGACATCGAGGGGCGTCATC | + |
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Preference number: 5 (lower is better) Translates to: HVDSQHCHQQKHGITLDMGNCSW*TSRGVI Trigger: GATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCC...CATATCTAGAGTGATCCCGTGCTTTTGCTGGTGGCAGTGCTGACTGTCAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031009.8 |
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| CDS-3UTR CAA 90 bp | ATGCTCTTGTTCTTACGCCTGTGGGTGGTCCGCAGCAAGTTTAATTTGCAAAGCGGGAACTGCAGCTGGTaGACATCGAGGGGCGTCATC | + |
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Preference number: 5 (lower is better) Translates to: MLLFLRLWVVRSKFNLQSGNCSW*TSRGVI Trigger: GATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCC...GCTTTGCAAATTAAACTTGCTGCGGACCACCCACAGGCGTAAGAACAAGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201415.4 |
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| CDS TCA 90 bp | GGTCATACTTGTACACTTTGTAGACAACCAGGAAGACGACACAGGTaGGGAAGGCCAGGGCAAAGAGGACCAGCACGGAGACCTTATCTG | + |
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Preference number: 5 (lower is better) Translates to: GHTCTLCRQPGRRHR*GRPGQRGPARRPYL Trigger: CAGATAAGGTCTCCGTGCTGGTCCTCTTTGCCCTGGCCTTCCTCACCTGTGTCGTCTTCCTGGTTGTCTACAAAGTGTACAAGTATGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
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| CDS-3UTR CAA 90 bp | ATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCGGGCACTGGAGTCTaGCTCCGTGTAGTAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: MKCPSKSPCCLQVTHRKEPGTGV*LRVVAL Trigger: GAGAGCTACTACACGGAGCAAGACTCCAGTGCCCGG...TTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS-3UTR CAA 90 bp | ATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAAGTGAACTCGGCTATCTaGGGAGGACGTGCTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: MKCPSKSPCCLQVTHRKEVNSAI*GGRAFP Trigger: AGGAAAAGCACGTCCTCCCAAGATAGCCGAGTTCAC...TTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 |
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| CDS-3UTR CAA 90 bp | TGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACATCGTAAGGAACCTGCCCGTGCTTTTCCTTTTTaGCGATCAGGTTCATATTCA | + |
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Preference number: 5 (lower is better) Translates to: CPSKSPCCLQVTHRKEPARAFPF*RSGSYS Trigger: TGAATATGAACCTGATCGCAAAAAAGGAAAAGCACG...GGCAGGTTCCTTACGATGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 |
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| CDS-3UTR CAA 90 bp | ATTATATTTAATGAAATGTCCCTCAAAGTCCCCTTGTTGCCTTCAAGTGACACACGTGCTTTTCCTTTTTaGCGATCAGGTTCATATTCA | + |
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Preference number: 5 (lower is better) Translates to: IIFNEMSLKVPLLPSSDTRAFPF*RSGSYS Trigger: TGAATATGAACCTGATCGCAAAAAAGGAAAAGCACG...TGTGTCACTTGAAGGCAACAAGGGGACTTTGAGGGACATTTCATTAAATATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 |
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| CDS CCA 72 bp | GGCAAAGAGGACCAGCACGGAGACCTTATCTGGGGGTaGGAACTGCAGCTGGTTGACATCGAGGGGCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: GKEDQHGDLIWG*ELQLVDIEGRH Trigger: ATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCGTGCTGGTCCTCTTTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
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| CDS CAA 90 bp | AGGACCAGCACGGAGACCTTATCTGGGGGTGGGAACTGCAGCTGGTaGACATCGAGGGGCGTCATCAAAGGAATGGTGTCGAAGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: RTSTETLSGGGNCSW*TSRGVIKGMVSKPS Trigger: GGATGGCTTCGACACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCGTGCTGGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
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| CDS GCA 72 bp | AGGACCAGCACGGAGACCTTATCTGGGGGTGGGAACTaGAGCTGGTTGACATCGAGGGGCGTCATCAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: RTSTETLSGGGN*SWLTSRGVIKG Trigger: TCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCGTGCTGGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
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| CDS TCA 72 bp | CCACGACCTTATCTGGGGGTGGGAACTGCAGCTGGTTaGCATCGAGGGGCGTCATCAAAGGAATGGTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PRPYLGVGTAAG*HRGASSKEWCR Trigger: TCGACACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201341.2 ENSMUST00000201363.4 |
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| CDS TCA 72 bp | CGGAGACCTTATCTGGGGGTGGGAACTGCAGCTGGTTaGCATCGAGGGGCGTCATCAAAGGAATGGTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: RRPYLGVGTAAG*HRGASSKEWCR Trigger: TCGACACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
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| CDS CCA 72 bp | AGCACGGAGACCTTATCTGGGGGTGGGAACTGCAGCTaGTTGACATCGAGGGGCGTCATCAAAGGAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: STETLSGGGNCS*LTSRGVIKGMV Trigger: CACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
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| CDS CAA 72 bp | ACCACGACCTTATCTGGGGGTGGGAACTGCAGCTGGTaGACATCGAGGGGCGTCATCAAAGGAATGGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: TTTLSGGGNCSW*TSRGVIKGMVS Trigger: CGACACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201341.2 ENSMUST00000201363.4 |
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| CDS CAA 72 bp | ACGGAGACCTTATCTGGGGGTGGGAACTGCAGCTGGTaGACATCGAGGGGCGTCATCAAAGGAATGGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: TETLSGGGNCSW*TSRGVIKGMVS Trigger: CGACACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCTCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201415.4 |
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| CDS CCA 72 bp | TTCACCACGACCTTATCTGGGGGTGGGAACTGCAGCTaGTTGACATCGAGGGGCGTCATCAAAGGAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: FTTTLSGGGNCS*LTSRGVIKGMV Trigger: CACCATTCCTTTGATGACGCCCCTCGATGTCAACCAGCTGCAGTTCCCACCCCCAGATAAGGTCGTGGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201341.2 ENSMUST00000201363.4 |
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| CDS GCA 72 bp | CTTGCTCCGTGTAGTAGCTCTCCAAGCCTTCTGGGATaGACTGGGTGTTCTTCAAGACAAACCCATCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LAPCSSSPSLLG*TGCSSRQTHQG Trigger: GCCCTGATGGGTTTGTCTTGAAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGCTACTACACGGAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS GCA 72 bp | AAAGGAATGGTGTCGAAGCCATCCTCCAGCAGTGGCTaGTTGGTGCCCTTCTCTGCGAAATTATTCCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: KGMVSKPSSSSG*LVPFSAKLFPN Trigger: GTTGGGGAATAATTTCGCAGAGAAGGGCACCAAGCAGCCACTGCTGGAGGATGGCTTCGACACCATTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031009.8 ENSMUST00000201134.2 ENSMUST00000201341.2 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS CCA 72 bp | GGAGTCTTGCTCCGTGTAGTAGCTCTCCAAGCCTTCTaGGATGCACTGGGTGTTCTTCAAGACAAACCCATC | + |
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Preference number: 6 (lower is better) Translates to: GVLLRVVALQAF*DALGVLQDKPI Trigger: GATGGGTTTGTCTTGAAGAACACCCAGTGCATCCCAGAAGGCTTGGAGAGCTACTACACGGAGCAAGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS CAA 90 bp | GTAGTGGTTTATGACAGTGTAAAATTTCTCCCGGGCACTGGAGTCTaGCTCCGTGTAGTAGCTCTCCAAGCCTTCTGGGATGCACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: VVVYDSVKFLPGTGV*LRVVALQAFWDALG Trigger: ACCCAGTGCATCCCAGAAGGCTTGGAGAGCTACTACACGGAGCAAGACTCCAGTGCCCGGGAGAAATTTTACACTGTCATAAACCACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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| CDS CAA 72 bp | TATGACAGTGTAAAATTTCTCCCGGGCACTGGAGTCTaGCTCCGTGTAGTAGCTCTCCAAGCCTTCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: YDSVKFLPGTGV*LRVVALQAFWD Trigger: ATCCCAGAAGGCTTGGAGAGCTACTACACGGAGCAAGACTCCAGTGCCCGGGAGAAATTTTACACTGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031009.8 ENSMUST00000201363.4 ENSMUST00000201415.4 |
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