Pregenerated sensors for NSF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034187Ensembl transcript IDs: ENSMUST00000103075.11, ENSMUST00000149642.3
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATCACCCAGGTGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTaGTGGCTGTCTTTGTGTTTGAAGCAGCAGCGGGGAGAGTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: YHPGAPVAASLPGGF*WLSLCLKQQRGEWH Trigger: ATGCCACTCTCCCCGCTGCTGCTTCAAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCACCTGGGTGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR CCA 90 bp | CTTCTACTGTGGGGACAGTGTCAGAGTATCACCCAGGTGCCCCTGTaGCAGCAAGCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: LLLWGQCQSITQVPL*QQASRAASDGCLCV Trigger: AACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCACCTGGGTGATACTCTGACACTGTCCCCACAGTAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 90 bp | GAGAGGCGGACACTTCACGTAGTCCAGTGTCTTGAGTGTGAGGAGTaGCGATCCCAGGCCATCTGCACCTTGGTCGCTTCCCTTGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: ERRTLHVVQCLECEE*RSQAICTLVASLGH Trigger: GTGACCAAGGGAAGCGACCAAGGTGCAGATGGCCTGGGATCGTCACTCCTCACACTCAAGACACTGGACTACGTGAAGTGTCCGCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR CCA 90 bp | ATGGGGAGCGCCAAGGGACTCCCTTGGAACCTCTACCTTTGCTCTTaGTCTCATGTAGAAGTTGACCTTCGGGCAGGTGGTAGGGATCGC | + |
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Preference number: 1 (lower is better) Translates to: MGSAKGLPWNLYLCS*SHVEVDLRAGGRDR Trigger: GCGATCCCTACCACCTGCCCGAAGGTCAACTTCTACATGAGACCAAGAGCAAAGGTAGAGGTTCCAAGGGAGTCCCTTGGCGCTCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR CCA 90 bp | TTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTGGTaGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTCACA | + |
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Preference number: 1 (lower is better) Translates to: LGGERQNCRQQGPRW*TGNHGTSHGNHSFT Trigger: TGTGAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR CCA 90 bp | TTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTaGTGGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLGGERQNCRQQGPR*WTGNHGTSHGNHSF Trigger: GAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR GCA 90 bp | AGTCCAGGGAACACGAGAACATCTCAAAAGCACGAGGGAGTTCACTaGACTAGTCATGCAGAGCGAGTGTGTGGAGAGAGGCGGACACTT | + |
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Preference number: 1 (lower is better) Translates to: SPGNTRTSQKHEGVH*TSHAERVCGERRTL Trigger: AAGTGTCCGCCTCTCTCCACACACTCGCTCTGCATGACTAGTGCAGTGAACTCCCTCGTGCTTTTGAGATGTTCTCGTGTTCCCTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 90 bp | TTTATGTGCTGCAGACACTACAGATCACTTGAGATACAAGGAGGATaGATTGTAAGTCATCAGGCTGAGGAAAAGGAAGACGATGGCACT | + |
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Preference number: 1 (lower is better) Translates to: FMCCRHYRSLEIQGG*IVSHQAEEKEDDGT Trigger: AGTGCCATCGTCTTCCTTTTCCTCAGCCTGATGACTTACAATTCATCCTCCTTGTATCTCAAGTGATCTGTAGTGTCTGCAGCACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTGGTGGCTCCCGGGCGGCTTCTaGTGGCTGTCTTTGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: TLLGGERQNCRQQGPRWWLPGGF*WLSLCL Trigger: CAAACACAAAGACAGCCATCAGAAGCCGCCCGGGAG...CCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTCACAACACAATTCAGCGGGGAGAGTGGCATaGGCCCTAAGACTCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: GQGTTVLATGITVSQHNSAGRVA*ALRLIS Trigger: GGAGATGAGTCTTAGGGCGCATGCCACTCTCCCCGC...TGAATTGTGTTGTGAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR TCA 90 bp | TGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTTTGAGATACAAGGAGGATaGATTGTAAGTCATCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CPCGSKPPGRLLMAVFVFEIQGG*IVSHQA Trigger: AGCCTGATGACTTACAATTCATCCTCCTTGTATCTC...AAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR CCA 90 bp | CATGTAGGACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACTGCAGAGCGAGTGTGTaGAGAGAGGCGGACACTTCA | + |
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Preference number: 2 (lower is better) Translates to: HVGLCWEEKGRTADNRDHCRASV*READTS Trigger: TGAAGTGTCCGCCTCTCTCCACACACTCGCTCTGCA...GTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGTCCTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTTTGGTGGCTTGTTCTGCTaGAGAGTAGTGTTTTATTTA | + |
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Preference number: 2 (lower is better) Translates to: CPCGSKPPGRLLMAVFVFGGLFC*RVVFYL Trigger: TAAATAAAACACTACTCTCCAGCAGAACAAGCCACC...AAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR GCA 90 bp | CATGTAGGACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGGGGTGGCTTGTTCTaGTGGAGAGTAGTGTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: HVGLCWEEKGRTADNRDHGGGLF*WRVVFY Trigger: ATAAAACACTACTCTCCAGCAGAACAAGCCACCCCC...GTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGTCCTACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR CCA 90 bp | ACTAGGGGGTGGCTTGTTCTGCTGGAGAGTAGTGTTTTATTTATGTGCTGCAGACTCTACCTTTGCTCTTaGTCTCATGTAGAAGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: TRGWLVLLESSVLFMCCRLYLCS*SHVEVD Trigger: GTCAACTTCTACATGAGACCAAGAGCAAAGGTAGAG...TCTGCAGCACATAAATAAAACACTACTCTCCAGCAGAACAAGCCACCCCCTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTTTATTTATGTGCTGCAGACACTACAGATCACTTGAGATACAAGGAGGATCTACCAAGTGGCAATaGTTAGCATATCTCTTACCA | + |
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Preference number: 2 (lower is better) Translates to: SVLFMCCRHYRSLEIQGGSTKWQ*LAYLLP Trigger: TGGTAAGAGATATGCTAATCATTGCCACTTGGTAGA...TCCTCCTTGTATCTCAAGTGATCTGTAGTGTCTGCAGCACATAAATAAAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | GGTGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTaGTGGCTGTCTTTGTGTTTGAAGCAGCAGCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GAPVAASLPGGF*WLSLCLKQQRG Trigger: TCCCCGCTGCTGCTTCAAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | GCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTTTaGAGCAGCAGCGGGGAGAGTGGCATGCGCCCTAAG | + |
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Preference number: 3 (lower is better) Translates to: ASRAASDGCLCV*SSSGESGMRPK Trigger: CTTAGGGCGCATGCCACTCTCCCCGCTGCTGCTTCAAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR CCA 72 bp | GAAAGGCAGAACTGCAGACAACAGGGACCACGGTGGTaGACAGGGAACCACGGTACTAGCCACGGGAATCAC | + |
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Preference number: 3 (lower is better) Translates to: ERQNCRQQGPRW*TGNHGTSHGNH Trigger: GTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR CCA 72 bp | GGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTaGTGGACAGGGAACCACGGTACTAGCCACGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: GERQNCRQQGPR*WTGNHGTSHGN Trigger: ATTCCCGTGGCTAGTACCGTGGTTCCCTGTCCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | ACACTTCACGTAGTCCAGTGTCTTGAGTGTGAGGAGTaGCGATCCCAGGCCATCTGCACCTTGGTCGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: TLHVVQCLECEE*RSQAICTLVAS Trigger: GGAAGCGACCAAGGTGCAGATGGCCTGGGATCGTCACTCCTCACACTCAAGACACTGGACTACGTGAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR GCA 72 bp | GTCTTTGTGTTTGAAGCAGCAGCGGGGAGAGTGGCATaGGCCCTAAGACTCATCTCCACGAATGACGTGACG | + |
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Preference number: 3 (lower is better) Translates to: VFVFEAAAGRVA*ALRLISTNDVT Trigger: CGTCACGTCATTCGTGGAGATGAGTCTTAGGGCGCATGCCACTCTCCCCGCTGCTGCTTCAAACACAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR CAA 90 bp | CATGTAGGACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACCCTTGGTCGCTTCCCTaGGTCACTGTTGTAAACAGT | + |
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Preference number: 3 (lower is better) Translates to: HVGLCWEEKGRTADNRDHPWSLP*VTVVNS Trigger: ACTGTTTACAACAGTGACCAAGGGAAGCGACCAAGG...GTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGTCCTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | GAGAGTGGCATGCGCCCTAAGACTCATCTCCACGAATaGCGTGACGACCTAATTGCATTCCTTCTAACCCAC | + |
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Preference number: 3 (lower is better) Translates to: ESGMRPKTHLHE*RDDLIAFLLTH Trigger: GTGGGTTAGAAGGAATGCAATTAGGTCGTCACGTCATTCGTGGAGATGAGTCTTAGGGCGCATGCCACTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | CCCCAAACAAGGTATACAGACGGCAAGACTAGGAGATaGTTTGCCTTCTACTGTGGGGACAGTGTCAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: PQTRYTDGKTRR*FAFYCGDSVRV Trigger: TACTCTGACACTGTCCCCACAGTAGAAGGCAAATCATCTCCTAGTCTTGCCGTCTGTATACCTTGTTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR-3UTR CAA 90 bp | CATGTAGGACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACTCTCCTGATTGCAACTaGGAAATATCTCTGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: HVGLCWEEKGRTADNRDHSPDCN*EISLKM Trigger: CATTTTCAGAGATATTTCCAAGTTGCAATCAGGAGA...GTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGTCCTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | CACTCAGAGCATATCACAGCCACCCCAGGAATGATTTaGCTTCCGATTAGAAAAGCTCTCCTGATTGCAACT | + |
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Preference number: 3 (lower is better) Translates to: HSEHITATPGMI*LPIRKALLIAT Trigger: AGTTGCAATCAGGAGAGCTTTTCTAATCGGAAGTCAAATCATTCCTGGGGTGGCTGTGATATGCTCTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | TGCAGACACTACAGATCACTTGAGATACAAGGAGGATaGATTGTAAGTCATCAGGCTGAGGAAAAGGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: CRHYRSLEIQGG*IVSHQAEEKED Trigger: GTCTTCCTTTTCCTCAGCCTGATGACTTACAATTCATCCTCCTTGTATCTCAAGTGATCTGTAGTGTCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | TGTTTTATTTATGTGCTGCAGACACTACAGATCACTTaGGATACAAGGAGGATGAATTGTAAGTCATCAGGC | + |
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Preference number: 3 (lower is better) Translates to: CFIYVLQTLQIT*DTRRMNCKSSG Trigger: GCCTGATGACTTACAATTCATCCTCCTTGTATCTCAAGTGATCTGTAGTGTCTGCAGCACATAAATAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| 3UTR TCA 72 bp | TTTCATAAGGTTTTAACGGCATCTACCAAGTGGCAATaGTTAGCATATCTCTTACCACAGAGCAAATTAATT | + |
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Preference number: 3 (lower is better) Translates to: FHKVLTASTKWQ*LAYLLPQSKLI Trigger: AATTAATTTGCTCTGTGGTAAGAGATATGCTAATCATTGCCACTTGGTAGATGCCGTTAAAACCTTATGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | TGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTTTCCAGCCCATTTTCGCTaGGGCAAGCTGAACGCGATG | + |
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Preference number: 4 (lower is better) Translates to: CPCGSKPPGRLLMAVFVFPAHFR*GKLNAM Trigger: CATCGCGTTCAGCTTGCCTCAGCGAAAATGGGCTGG...AAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | ATCGCGGTGTGGGCAGCGTGCACGGGTGTGACATGCCTCCCACATAAGCAGGAAGCCTGGTTGTTGAACTaGTGGATGAACTCGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: IAVWAACTGVTCLPHKQEAWLLN*WMNSAA Trigger: GGCCGCCGAGTTCATCCAGCAGTTCAACAACCAGGC...TTCCTGCTTATGTGGGAGGCATGTCACACCCGTGCACGCTGCCCACACCGCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CCA 90 bp | ATCGCGGTGTGGGCAGCGTGCACGGGTGTGACATGCCTCCCACATAAGCAGGAAGCAATGTTGGGCACGTaGATGGTGGTGCTGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: IAVWAACTGVTCLPHKQEAMLGT*MVVLKA Trigger: CGCCTTCAGCACCACCATCCACGTGCCCAACATTGC...TTCCTGCTTATGTGGGAGGCATGTCACACCCGTGCACGCTGCCCACACCGCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CCA 90 bp | ATCGCGGTGTGGGCAGCGTGCACGGGTGTGACATGCCTCCCACATAAGCAGGAACTCCTGTGGCAATGTTaGGCACGTGGATGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IAVWAACTGVTCLPHKQELLWQC*ARGWWC Trigger: GCACCACCATCCACGTGCCCAACATTGCCACAGGAG...TTCCTGCTTATGTGGGAGGCATGTCACACCCGTGCACGCTGCCCACACCGCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | AGTGTGAGGAGTGACGATCCCAGGCCATCTGCACCTTGGTCGCTTCCCTTGGTCTGGACAGCAGCTGGTTaGCCACGGTGTCATGCACTC | + |
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Preference number: 4 (lower is better) Translates to: SVRSDDPRPSAPWSLPLVWTAAG*PRCHAL Trigger: GAGTGCATGACACCGTGGTCAACCAGCTGCTGTCCA...GACCAAGGGAAGCGACCAAGGTGCAGATGGCCTGGGATCGTCACTCCTCACACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | TGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTTTAGAGCTTCCAGCAGCTaGTCTCCTGTGGCAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: CPCGSKPPGRLLMAVFVFRASSS*SPVAML Trigger: CAACATTGCCACAGGAGAGCAGCTGCTGGAAGCTCT...AAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | TGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTTTCCACGACCACACAGCTaGGCTGAGATTTGTAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: CPCGSKPPGRLLMAVFVFPRPHS*AEICKH Trigger: ATGCTTACAAATCTCAGCTCAGCTGTGTGGTCGTGG...AAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | GGAGTGACGATCCCAGGCCATCTGCACCTTGGTCGCTTCCCTTGGTCACTGTTGTTCCCTTTGACTTGCTaGGCAATTGTGGTGCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GVTIPGHLHLGRFPWSLLFPLTC*AIVVRS Trigger: GGAACGCACCACAATTGCTCAGCAAGTCAAAGGGAA...CAACAGTGACCAAGGGAAGCGACCAAGGTGCAGATGGCCTGGGATCGTCACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CCA 90 bp | ATCGCGGTGTGGGCAGCGTGCACGGGTGTGACATGCCTCCCACATAAGCAGGAATCGACCCTTCTCATCTaGCAAGCCTATCTCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: IAVWAACTGVTCLPHKQESTLLI*QAYLHF Trigger: AAAATGGAGATAGGCTTGCCAGATGAGAAGGGTCGA...TTCCTGCTTATGTGGGAGGCATGTCACACCCGTGCACGCTGCCCACACCGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CCA 90 bp | ATCGCGGTGTGGGCAGCGTGCACGGGTGTGACATGCCTCCCACATAAGCAGGAAGTTGGTGCCAAATGCTaGTTTGATATCGTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IAVWAACTGVTCLPHKQEVGAKC*FDIVLQ Trigger: CTGGAGAACGATATCAAACCAGCATTTGGCACCAAC...TTCCTGCTTATGTGGGAGGCATGTCACACCCGTGCACGCTGCCCACACCGCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | GTTCACTGCACTAGTCATGCAGAGCGAGTGTGTGGAGAGAGGCGGACACTTCACCGCCTTCTTCTCTCATaGGGGCCAAGAATTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VHCTSHAERVCGERRTLHRLLLS*GPRISS Trigger: TGAGGAAATTCTTGGCCCTCATGAGAGAAGAAGGCG...GTGAAGTGTCCGCCTCTCTCCACACACTCGCTCTGCATGACTAGTGCAGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | GTTCACTGCACTAGTCATGCAGAGCGAGTGTGTGGAGAGAGGCGGACACTTCACCCTACCTCAATCTTCTaGCTTTTGCCTGATGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VHCTSHAERVCGERRTLHPTSIF*LLPDAG Trigger: GCCTGCATCAGGCAAAAGGCAGAAGATTGAGGTAGG...GTGAAGTGTCCGCCTCTCTCCACACACTCGCTCTGCATGACTAGTGCAGTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | GGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTCACAACACAATTCATCCCCTCTTGTCACCTaGAGGCTCTCTGCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GQGTTVLATGITVSQHNSSPLVT*RLSAFS Trigger: GGAGAAGGCAGAGAGCCTGCAGGTGACAAGAGGGGA...TGAATTGTGTTGTGAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | AAGAGGTGTGTTGAGTACGCTGGAATGGATATTCGAGGGCTGAGGGAGAGGACTTTCCTCGGCAATCTTTaGAGCCAGGGCAGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KRCVEYAGMDIRGLRERTFLGNL*SQGSLP Trigger: GGGAAGACTGCCCTGGCTGCAAAGATTGCCGAGGAA...AGTCCTCTCCCTCAGCCCTCGAATATCCATTCCAGCGTACTCAACACACCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | GTTCACTGCACTAGTCATGCAGAGCGAGTGTGTGGAGAGAGGCGGACACTTCACGTAAATATGTACTTGTaGTTGGGGGACGTCCTCACC | + |
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Preference number: 4 (lower is better) Translates to: VHCTSHAERVCGERRTLHVNMYL*LGDVLT Trigger: GGTGAGGACGTCCCCCAATCACAAGTACATATTTAC...GTGAAGTGTCCGCCTCTCTCCACACACTCGCTCTGCATGACTAGTGCAGTGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | GGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTCACAACACAATTCACCACAGCCAGCTCCTTaGTGTCCACATCTGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: GQGTTVLATGITVSQHNSPQPAP*CPHLQT Trigger: TGTCTGCAGATGTGGACATCAAGGAGCTGGCTGTGG...TGAATTGTGTTGTGAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | ACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTGGTGGCACCCGAGAAGCAAATaGTCTTCGGAAAATGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: TLLGGERQNCRQQGPRWWHPRSK*SSENVR Trigger: TCGGACATTTTCCGAAGAGCATTTGCTTCTCGGGTG...CCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | CATGTAGGACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACCTTTGGTGCTGGCCTTaGTATGTCTGTTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HVGLCWEEKGRTADNRDHLWCWP*YVCSWL Trigger: CAGCCATGAACAGACATATCAAGGCCAGCACCAAAG...GTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGTCCTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | ACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTGGTGGTGCGTTCCTTATCTTTaGAGTTGCCCAAAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLGGERQNCRQQGPRWWCVPYL*SCPKAP Trigger: TGGAGCTTTTGGGCAACTTCAAAGATAAGGAACGCA...CCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | ACTAGGGGGTGGCTTGTTCTGCTGGAGAGTAGTGTTTTATTTATGTGCTGCAGAGCACCAAGCCTCCTTTaGTCCTCTTCGGCATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRGWLVLLESSVLFMCCRAPSLL*SSSASA Trigger: TGCTGATGCCGAAGAGGAGCAAAGGAGGCTTGGTGC...TCTGCAGCACATAAATAAAACACTACTCTCCAGCAGAACAAGCCACCCCCTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | ACTAGGGGGTGGCTTGTTCTGCTGGAGAGTAGTGTTTTATTTATGTGCTGCAGAGCAGACAGTAACTGGTaGCCTCTCATCCTTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRGWLVLLESSVLFMCCRADSNW*PLILAV Trigger: CACAGCAAGGATGAGAGGGCACCAGTTACTGTCTGC...TCTGCAGCACATAAATAAAACACTACTCTCCAGCAGAACAAGCCACCCCCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CCA 90 bp | GGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTCACAACACAATTCACGGTGTCGTAAGGGTTaGAGTCGATGTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGTTVLATGITVSQHNSRCRKG*SRCSSS Trigger: AGAAGAAGAACATCGACTCCAACCCTTACGACACCG...TGAATTGTGTTGTGAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CCA 90 bp | GGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTCACAACACAATTCACTCACCATCACATGCTaGCCAGACTGGAAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQGTTVLATGITVSQHNSLTITC*PDWKSF Trigger: AAAAGATTTCCAGTCTGGCCAGCATGTGATGGTGAG...TGAATTGTGTTGTGAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | AGTGTTTTATTTATGTGCTGCAGACACTACAGATCACTTGAGATACAAGGAGGAATCTTCTTCATGGCCTaGCACTTGGCTGTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLFMCCRHYRSLEIQGGIFFMA*HLAVSE Trigger: CTCCGAGACAGCCAAGTGTCAGGCCATGAAGAAGAT...TCCTCCTTGTATCTCAAGTGATCTGTAGTGTCTGCAGCACATAAATAAAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | AGTGTTTTATTTATGTGCTGCAGACACTACAGATCACTTGAGATACAAGGAGGAAGGATGTTGTTCAGCTaGTCAACGCCATCGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLFMCCRHYRSLEIQGGRMLFS*STPSIL Trigger: CAAGATCGATGGCGTTGAGCAGCTGAACAACATCCT...TCCTCCTTGTATCTCAAGTGATCTGTAGTGTCTGCAGCACATAAATAAAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR GCA 90 bp | AGTTTCACAACACAATTCACTCTTTCAAAGCCACAAAATAAGCCAGGGATGAAAAGCATCTCCATTTCCTaGAGGACATCTTTGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFTTQFTLSKPQNKPGMKSISIS*RTSLRL Trigger: CAGCCGCAAAGATGTCCTGCAGGAAATGGAGATGCT...TTTCATCCCTGGCTTATTTTGTGGCTTTGAAAGAGTGAATTGTGTTGTGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR TCA 90 bp | AGTGTTTTATTTATGTGCTGCAGACACTACAGATCACTTGAGATACAAGGAGGAAATCATCTTATCAGGTaGGCAGATCTTGATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLFMCCRHYRSLEIQGGNHLIR*ADLDEG Trigger: CCCTTCATCAAGATCTGCTCACCTGATAAGATGATT...TCCTCCTTGTATCTCAAGTGATCTGTAGTGTCTGCAGCACATAAATAAAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | TGCCCCTGTGGCAGCAAGCCTCCCGGGCGGCTTCTGATGGCTGTCTTTGTGTTTTCAACGCCATCGATCTaGGACAGCAGCTGGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: CPCGSKPPGRLLMAVFVFSTPSI*DSSWLT Trigger: GGTCAACCAGCTGCTGTCCAAGATCGATGGCGTTGA...AAACACAAAGACAGCCATCAGAAGCCGCCCGGGAGGCTTGCTGCCACAGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS TCA 90 bp | TTGGATTCCTCGGCAATCTTTGCAGCCAGGGCAGTCTTCCCGCTGTaGGGAGGCCCTTCTAGGAGGACACTAACGAGTGGTGTCCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDSSAIFAARAVFPL*GGPSRRTLTSGVRS Trigger: TGACCGGACACCACTCGTTAGTGTCCTCCTAGAAGGGCCTCCTCACAGCGGGAAGACTGCCCTGGCTGCAAAGATTGCCGAGGAATCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS GCA 90 bp | TCTAGGAGGACACTAACGAGTGGTGTCCGGTCACTGTTTTTCGTTTaGTGGACCAGCAGCTCTCCGTCATCTAGGACTCGGGTCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRTLTSGVRSLFFV*WTSSSPSSRTRVTG Trigger: CCCCGTGACCCGAGTCCTAGATGACGGAGAGCTGCTGGTCCAGCAAACGAAAAACAGTGACCGGACACCACTCGTTAGTGTCCTCCTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS GCA 90 bp | GGCACGTGGATGGTGGTGCTGAAGGCGTTCAGCATCTCCATTTCCTaGAGGACATCTTTGCGGCTGGTGGTCCCGATGATAAGAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTWMVVLKAFSISIS*RTSLRLVVPMIRSL Trigger: CAAGCTTCTTATCATCGGGACCACCAGCCGCAAAGATGTCCTGCAGGAAATGGAGATGCTGAACGCCTTCAGCACCACCATCCACGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | GTTCACTGCACTAGTCATGCAGAGCGAGTGTGTGGAGAGAGGCGGACACTTCACGTCACTGTTTTTCGTTaGCTGGACCAGCAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VHCTSHAERVCGERRTLHVTVFR*LDQQLS Trigger: GGAGAGCTGCTGGTCCAGCAAACGAAAAACAGTGAC...GTGAAGTGTCCGCCTCTCTCCACACACTCGCTCTGCATGACTAGTGCAGTGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | CATGTAGGACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACTCTCCTGTGGCAATGTaGGGCACGTGGATGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HVGLCWEEKGRTADNRDHSPVAM*GTWMVV Trigger: CACCACCATCCACGTGCCCAACATTGCCACAGGAGA...GTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGTCCTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGGAGTGACGATCCCAGGCCATCTGCACCTTGGTCGCTTCCCTTGGTCATGCCTTTAACATGTTaGCAACCCATCTGTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SVRSDDPRPSAPWSLPLVMPLTC*QPICST Trigger: CGTGGAACAGATGGGTTGCAAACATGTTAAAGGCAT...GACCAAGGGAAGCGACCAAGGTGCAGATGGCCTGGGATCGTCACTCCTCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | AAGAGGTGTGTTGAGTACGCTGGAATGGATATTCGAGGGCTGAGGGAGAGGACTATTCCTCGGCAATCTTaGCAGCCAGGGCAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRCVEYAGMDIRGLRERTIPRQS*QPGQSS Trigger: GGAAGACTGCCCTGGCTGCAAAGATTGCCGAGGAAT...AGTCCTCTCCCTCAGCCCTCGAATATCCATTCCAGCGTACTCAACACACCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGGAGTGACGATCCCAGGCCATCTGCACCTTGGTCGCTTCCCTTGGTCTCCTTATCTTTGAAGTaGCCCAAAAGCTCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVRSDDPRPSAPWSLPLVSLSLK*PKSSRA Trigger: AGCTCTGGAGCTTTTGGGCAACTTCAAAGATAAGGA...GACCAAGGGAAGCGACCAAGGTGCAGATGGCCTGGGATCGTCACTCCTCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | AGTGTGAGGAGTGACGATCCCAGGCCATCTGCACCTTGGTCGCTTCCCTTGGTCATCAAATCTGGTCTATaGGTCATTCCGATAACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVRSDDPRPSAPWSLPLVIKSGL*VIPITR Trigger: CCTCGTTATCGGAATGACCAATAGACCAGATTTGAT...GACCAAGGGAAGCGACCAAGGTGCAGATGGCCTGGGATCGTCACTCCTCACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | ACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTGGTGGACTTTGGTGCTGGCCTaGATATGTCTGTTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLGGERQNCRQQGPRWWTLVLA*ICLFMA Trigger: AGCCATGAACAGACATATCAAGGCCAGCACCAAAGT...CCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | ACTTTGTTGGGAGGAGAAAGGCAGAACTGCAGACAACAGGGACCACGGTGGTGGTCAGGTGAGCAGATCTaGATGAAGGGGAAGTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TLLGGERQNCRQQGPRWWSGEQI*MKGKLD Trigger: ATCCAACTTCCCCTTCATCAAGATCTGCTCACCTGA...CCACCACCGTGGTCCCTGTTGTCTGCAGTTCTGCCTTTCTCCTCCCAACAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | ACTAGGGGGTGGCTTGTTCTGCTGGAGAGTAGTGTTTTATTTATGTGCTGCAGACAAGGAAGTCCCCTCTaGTCACCTGCAGGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRGWLVLLESSVLFMCCRQGSPL*SPAGSL Trigger: CAGAGAGCCTGCAGGTGACAAGAGGGGACTTCCTTG...TCTGCAGCACATAAATAAAACACTACTCTCCAGCAGAACAAGCCACCCCCTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | ACTAGGGGGTGGCTTGTTCTGCTGGAGAGTAGTGTTTTATTTATGTGCTGCAGATCCACAGCCAGCTCCTaGATGTCCACATCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRGWLVLLESSVLFMCCRSTASS*MSTSAD Trigger: GTCTGCAGATGTGGACATCAAGGAGCTGGCTGTGGA...TCTGCAGCACATAAATAAAACACTACTCTCCAGCAGAACAAGCCACCCCCTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | GGACAGGGAACCACGGTACTAGCCACGGGAATCACAGTTTCACAACACAATTCAACGGGGTCACCCCACTaGATGATCCCATTCATAATG | + |
|
Preference number: 5 (lower is better) Translates to: GQGTTVLATGITVSQHNSTGSPH*MIPFIM Trigger: CATTATGAATGGGATCATCAAGTGGGGTGACCCCGT...TGAATTGTGTTGTGAAACTGTGATTCCCGTGGCTAGTACCGTGGTTCCCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS-3UTR CAA 90 bp | AAGAGGTGTGTTGAGTACGCTGGAATGGATATTCGAGGGCTGAGGGAGAGGACTGTGCGTTCCTTATCTTaGAAGTTGCCCAAAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KRCVEYAGMDIRGLRERTVRSLS*KLPKSS Trigger: GGAGCTTTTGGGCAACTTCAAAGATAAGGAACGCAC...AGTCCTCTCCCTCAGCCCTCGAATATCCATTCCAGCGTACTCAACACACCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS TCA 90 bp | GGACATAATCGAGCAGCCTCTCAATGTCATCCACGACCACACAGCTaGGCTGAGATTTGTAAGCATCATCAAAGATCTTCTTCATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHNRAASQCHPRPHS*AEICKHHQRSSSWP Trigger: AGGCCATGAAGAAGATCTTTGATGATGCTTACAAATCTCAGCTCAGCTGTGTGGTCGTGGATGACATTGAGAGGCTGCTCGATTATGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS GCA 90 bp | GGTCACGGGGTCACCCCACTTGATGATCCCATTCATAATGTAACTTaGATAATCCTCTTGGTTGGTGCCAAATGCTGGTTTGATATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHGVTPLDDPIHNVT*IILLVGAKCWFDIV Trigger: AACGATATCAAACCAGCATTTGGCACCAACCAAGAGGATTATGCAAGTTACATTATGAATGGGATCATCAAGTGGGGTGACCCCGTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS CCA 90 bp | GAGATTTGTAAGCATCATCAAAGATCTTCTTCATGGCCTGACACTTaGCTGTCTCGGAGAAGCCAATCATCTTATCAGGTGAGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: EICKHHQRSSSWPDT*LSRRSQSSYQVSRS Trigger: AGATCTGCTCACCTGATAAGATGATTGGCTTCTCCGAGACAGCCAAGTGTCAGGCCATGAAGAAGATCTTTGATGATGCTTACAAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS TCA 72 bp | GCTGCTCAACGCCATCGATCTTGGACAGCAGCTGGTTaGCCACGGTGTCATGCACTCCAGTGCTGCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AAQRHRSWTAAG*PRCHALQCCRP Trigger: TGGCCGGCAGCACTGGAGTGCATGACACCGTGGTCAACCAGCTGCTGTCCAAGATCGATGGCGTTGAGCAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS TCA 72 bp | TCGGCAATCTTTGCAGCCAGGGCAGTCTTCCCGCTGTaGGGAGGCCCTTCTAGGAGGACACTAACGAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAIFAARAVFPL*GGPSRRTLTSG Trigger: ACCACTCGTTAGTGTCCTCCTAGAAGGGCCTCCTCACAGCGGGAAGACTGCCCTGGCTGCAAAGATTGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS GCA 72 bp | CTTGATGAAGGGGAAGTTGGATTCCTCGGCAATCTTTaGAGCCAGGGCAGTCTTCCCGCTGTGAGGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LDEGEVGFLGNL*SQGSLPAVRRP Trigger: GGGCCTCCTCACAGCGGGAAGACTGCCCTGGCTGCAAAGATTGCCGAGGAATCCAACTTCCCCTTCATCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS CCA 72 bp | TCCAGCAGCTGCTCTCCTGTGGCAATGTTGGGCACGTaGATGGTGGTGCTGAAGGCGTTCAGCATCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SSSCSPVAMLGT*MVVLKAFSISI Trigger: AATGGAGATGCTGAACGCCTTCAGCACCACCATCCACGTGCCCAACATTGCCACAGGAGAGCAGCTGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS GCA 72 bp | ACACTAACGAGTGGTGTCCGGTCACTGTTTTTCGTTTaGTGGACCAGCAGCTCTCCGTCATCTAGGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: TLTSGVRSLFFV*WTSSSPSSRTR Trigger: CCGAGTCCTAGATGACGGAGAGCTGCTGGTCCAGCAAACGAAAAACAGTGACCGGACACCACTCGTTAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS GCA 72 bp | ATGGTGGTGCTGAAGGCGTTCAGCATCTCCATTTCCTaGAGGACATCTTTGCGGCTGGTGGTCCCGATGATA | + |
|
Preference number: 6 (lower is better) Translates to: MVVLKAFSISIS*RTSLRLVVPMI Trigger: TATCATCGGGACCACCAGCCGCAAAGATGTCCTGCAGGAAATGGAGATGCTGAACGCCTTCAGCACCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS CCA 72 bp | GAGCCTGCAATACCAGGTTGGAGAACCGGGGACCAATaGGGACATAATCGAGCAGCCTCTCAATGTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: EPAIPGWRTGDQ*GHNRAASQCHP Trigger: TGGATGACATTGAGAGGCTGCTCGATTATGTCCCCATTGGTCCCCGGTTCTCCAACCTGGTATTGCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS TCA 72 bp | ACTGACGGATGGGTCCTCAGCGTAAATATGTACTTGTaGTTGGGGGACGTCCTCACCATCACATGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TDGWVLSVNMYL*LGDVLTITCWP Trigger: TGGCCAGCATGTGATGGTGAGGACGTCCCCCAATCACAAGTACATATTTACGCTGAGGACCCATCCGTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103075.11 ENSMUST00000149642.3 |
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| CDS TCA 72 bp | CGAGCAGCCTCTCAATGTCATCCACGACCACACAGCTaGGCTGAGATTTGTAAGCATCATCAAAGATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RAASQCHPRPHS*AEICKHHQRSS Trigger: AGAAGATCTTTGATGATGCTTACAAATCTCAGCTCAGCTGTGTGGTCGTGGATGACATTGAGAGGCTGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS CAA 72 bp | AAATCTGGTCTATTGGTCATTCCGATAACGAGGATGTaGTTCAGCTGCTCAACGCCATCGATCTTGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: KSGLLVIPITRM*FSCSTPSILDS Trigger: GCTGTCCAAGATCGATGGCGTTGAGCAGCTGAACAACATCCTCGTTATCGGAATGACCAATAGACCAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS CAA 72 bp | TCGGAGAAGCCAATCATCTTATCAGGTGAGCAGATCTaGATGAAGGGGAAGTTGGATTCCTCGGCAATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SEKPIILSGEQI*MKGKLDSSAIF Trigger: AAAGATTGCCGAGGAATCCAACTTCCCCTTCATCAAGATCTGCTCACCTGATAAGATGATTGGCTTCTCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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| CDS CAA 90 bp | ACCCCACTTGATGATCCCATTCATAATGTAACTTGCATAATCCTCTaGGTTGGTGCCAAATGCTGGTTTGATATCGTTCTCCAGGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TPLDDPIHNVTCIIL*VGAKCWFDIVLQGS Trigger: GCTTCCCTGGAGAACGATATCAAACCAGCATTTGGCACCAACCAAGAGGATTATGCAAGTTACATTATGAATGGGATCATCAAGTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103075.11 |
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