RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NRXN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024109

Ensembl transcript IDs: ENSMUST00000054059.15, ENSMUST00000072671.14, ENSMUST00000159778.8, ENSMUST00000160800.9, ENSMUST00000160844.10, ENSMUST00000161402.10, ENSMUST00000172466.8, ENSMUST00000173222.2, ENSMUST00000173917.8, ENSMUST00000174331.8, ENSMUST00000174337.8, ENSMUST00000176118.2, ENSMUST00000196559.5, ENSMUST00000197104.2, ENSMUST00000197224.2, ENSMUST00000197268.5

Found 1036 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGCAGATGGTCCCATAAGAAGACTTCTTCTCTGGCACGCCCACTaGCTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGG +
Preference number: 1 (lower is better)
Translates to: SADGPIRRLLLWHAH*LAPQESASTLAESR
Trigger: CCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGGCGTGCCAGAGAAGAAGTCTTCTTATGGGACCATCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTaGGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACA +
Preference number: 1 (lower is better)
Translates to: FVLCLDVILLCFMNA*GPHRLLERPSNIKT
Trigger: TGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR GCA 90 bp TGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATaGGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAA +
Preference number: 1 (lower is better)
Translates to: WFCVVPRCNTPLLYE*VRSSPSFRTSQQHK
Trigger: TTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR GCA 90 bp GGTAGCTTCTTTGTGTGTGTTGTGTTTTGTGTTGGTTTTGTGTTGTaGCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCT +
Preference number: 1 (lower is better)
Translates to: GSFFVCVVFCVGFVL*LDVILLCFMNACGP
Trigger: AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACACAAAACACAACACACACAAAGAAGCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR TCA 90 bp AGTCAGTTTATGCCAGGTAGTGTGAAAACTTCTGTGAGCTGCAAGTaGCACACGGAACCTGATATGTTTAGTATAAAGATACTTGGGTTG +
Preference number: 1 (lower is better)
Translates to: SQFMPGSVKTSVSCK*HTEPDMFSIKILGL
Trigger: CAACCCAAGTATCTTTATACTAAACATATCAGGTTCCGTGTGTCACTTGCAGCTCACAGAAGTTTTCACACTACCTGGCATAAACTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR TCA 90 bp CTTAGATATTCAGTCATTAGAAGCACTAGAAGGGTACGATTGAAGTaGCCTTCCGTTGACTTCTTAGGGATGAACCACCTCACACATTAT +
Preference number: 1 (lower is better)
Translates to: LRYSVIRSTRRVRLK*PSVDFLGMNHLTHY
Trigger: ATAATGTGTGAGGTGGTTCATCCCTAAGAAGTCAACGGAAGGTCACTTCAATCGTACCCTTCTAGTGCTTCTAATGACTGAATATCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR GCA 90 bp AGCATCTTTTCCTGTGTGTGTCTGGGGATAAGATCTCCTTTCAAATaGATTCTTCTTCATTGTTATATTCAGTGGCAAATTGCTGTCATG +
Preference number: 1 (lower is better)
Translates to: SIFSCVCLGIRSPFK*ILLHCYIQWQIAVM
Trigger: CATGACAGCAATTTGCCACTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACACACAGGAAAAGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR TCA 90 bp TTTTCAATTTGTCAGTATTTGTGTGTTTTGGTATTCCATCATATCTaGTGGCTGCCTGTGTATGTGTATTTGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: FSICQYLCVLVFHHI*WLPVYVYLCVCVCV
Trigger: CACACACACACACACACACAAATACACATACACAGGCAGCCATCAGATATGATGGAATACCAAAACACACAAATACTGACAAATTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
3UTR TCA 90 bp TTATTACACAATTTCTTGGCAGCTGTACCTCATAGTGATTTGCTATaGTATCTATGTATTTCTAAGGTAGTGTTGTGTCTGAAATCCAGG +
Preference number: 1 (lower is better)
Translates to: LLHNFLAAVPHSDLL*YLCISKVVLCLKSR
Trigger: CCTGGATTTCAGACACAACACTACCTTAGAAATACATAGATATCATAGCAAATCACTATGAGGTACAGCTGCCAAGAAATTGTGTAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR-3UTR TCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGTACTCCTTTGCTTTATaGATGCGTGCGGTCCTCACC +
Preference number: 2 (lower is better)
Translates to: QESASTLAESRIIGSFFVYSFAL*MRAVLT
Trigger: GGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTA...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR GCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCGATGTAATACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: LAPQESASTLAESRIIGSDVILL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTATTACATC...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAGGCACGCCCACTGACTaGCTCCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIGTPTD*LLRKAL
Trigger: TAGCGCTTTCCTGAGGAGCCAGTCAGTGGGCGTGCC...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
3UTR-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTAAGAGTTTTCCCTCCTaGTCGCATTCCCTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: FVLCLDVILLCFMNACGPKSFPS*SHSLSS
Trigger: AGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTT...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR CCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGGGCACGCCCACTGACTaGCTCCTCAGGAAAGCGCTA +
Preference number: 2 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQGTPTD*LLRKAL
Trigger: TAGCGCTTTCCTGAGGAGCCAGTCAGTGGGCGTGCC...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR-3UTR GCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGGATGTAATACTCCTTTaGTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: QESASTLAESRIIGSFFVDVILL*FMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTATTACATC...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR GCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCCCCTGCTCCAGTTGTaGCAGCTGACCAACTCCTCA +
Preference number: 2 (lower is better)
Translates to: VCLGIRSPFKCILLHCYIPLLQL*QLTNSS
Trigger: TGAGGAGTTGGTCAGCTGGCACAACTGGAGCAGGGG...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR-3UTR TCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCAAGAGTTTTCCCTCCTaGTCGCATTCCCTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: KTSRVNENTADVREFYWPKSFPS*SHSLSS
Trigger: AGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGAAGAGTTTTCCCTCCTaGTCGCATTCCCTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVKSFPS*SHSLSS
Trigger: AGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR GCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTCCTTTGCTTTATGAATaGGTGCGGTCCTCACCGTCT +
Preference number: 2 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTPLLYE*VRSSPS
Trigger: AGACGGTGAGGACCGCACGCATTCATAAAGCAAAGG...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
3UTR CAA 90 bp ATAGGTAGCTTCTTTGTGTGTGTTGTGTTTTGTGTTGGTTTTGTGTaGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGT +
Preference number: 2 (lower is better)
Translates to: IGSFFVCVVFCVGFV*CLDVILLCFMNACG
Trigger: ACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACACAAAACACAACACACACAAAGAAGCTACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR GCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAACTCCTCATAATCTaGAGATGGTCCCATAAGAAG +
Preference number: 2 (lower is better)
Translates to: VCLGIRSPFKCILLHCYIQLLII*RWSHKK
Trigger: CTTCTTATGGGACCATCTGCAGATTATGAGGAGTTG...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR TCA 72 bp GGTCCCATAAGAAGACTTCTTCTCTGGCACGCCCACTaGCTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCT +
Preference number: 3 (lower is better)
Translates to: GPIRRLLLWHAH*LAPQESASTLA
Trigger: AGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGGCGTGCCAGAGAAGAAGTCTTCTTATGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCGATGTAATACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: LAPQESASTLAESRIIGSRCNTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTATTACATCG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR CAA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATGTGTTGGTTTTGTGTaGTGCCTCGATGTAATACTC +
Preference number: 3 (lower is better)
Translates to: PTDWLLRKALALWLNPGSCVGFV*CLDVIL
Trigger: GAGTATTACATCGAGGCACAACACAAAACCAACACA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR GCA 72 bp GCTCCAGTTGTGCCAGCTGACCAACTCCTCATAATCTaGAGATGGTCCCATAAGAAGACTTCTTCTCTGGCA +
Preference number: 3 (lower is better)
Translates to: APVVPADQLLII*RWSHKKTSSLA
Trigger: TGCCAGAGAAGAAGTCTTCTTATGGGACCATCTGCAGATTATGAGGAGTTGGTCAGCTGGCACAACTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTGTGTTGGTTTTGTGTaGTGCCTCGATGTAATACTC +
Preference number: 3 (lower is better)
Translates to: LAPQESASTLAESRIIGSCVGFV*CLDVIL
Trigger: GAGTATTACATCGAGGCACAACACAAAACCAACACA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR GCA 72 bp TGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTaGGGTCCTCACCGTCTTTTAGAACGTCCCAGCAAC +
Preference number: 3 (lower is better)
Translates to: CLDVILLCFMNA*GPHRLLERPSN
Trigger: GTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR GCA 72 bp GTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATaGGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAG +
Preference number: 3 (lower is better)
Translates to: VVPRCNTPLLYE*VRSSPSFRTSQ
Trigger: CTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR CAA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGCGATGTAATACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: QESASTLAESRIIGSFFVRCNTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTATTACATCG...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR TCA 72 bp TCAGTCATTAGAAGCACTAGAAGGGTACGATTGAAGTaGCCTTCCGTTGACTTCTTAGGGATGAACCACCTC +
Preference number: 3 (lower is better)
Translates to: SVIRSTRRVRLK*PSVDFLGMNHL
Trigger: GAGGTGGTTCATCCCTAAGAAGTCAACGGAAGGTCACTTCAATCGTACCCTTCTAGTGCTTCTAATGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
3UTR GCA 72 bp GTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTaGTTTATGAATGCGTGCGGTCCTCACCGTCTTTTA +
Preference number: 3 (lower is better)
Translates to: VGFVLCLDVILL*FMNACGPHRLL
Trigger: TAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTCGATGTAATACTCCTTaGCTTTATGAATGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTRCNTP*LYECVR
Trigger: CCGCACGCATTCATAAAGCAAAGGAGTATTACATCG...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
3UTR-3UTR CAA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAGTGTTGTGTTTTGTGTaGGTTTTGTGTTGTGCCTCG +
Preference number: 3 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIVLCFV*VLCCAS
Trigger: CGAGGCACAACACAAAACCAACACAAAACACAACAC...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
3UTR TCA 72 bp TGTCAGTATTTGTGTGTTTTGGTATTCCATCATATCTaGTGGCTGCCTGTGTATGTGTATTTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: CQYLCVLVFHHI*WLPVYVYLCVC
Trigger: ACACACACACAAATACACATACACAGGCAGCCATCAGATATGATGGAATACCAAAACACACAAATACTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
3UTR GCA 72 bp TTTGTGTGTGTTGTGTTTTGTGTTGGTTTTGTGTTGTaGCTCGATGTAATACTCCTTTGCTTTATGAATGCG +
Preference number: 3 (lower is better)
Translates to: FVCVVFCVGFVL*LDVILLCFMNA
Trigger: CGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACACAAAACACAACACACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
3UTR TCA 72 bp CTAAGAATTCAAGGTCTCCTGGAATCAGAATCTCAATaGAGCAAATCACCGATTTGTTATAATACCTTGGCA +
Preference number: 3 (lower is better)
Translates to: LRIQGLLESESQ*SKSPICYNTLA
Trigger: TGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAATTCTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
3UTR TCA 72 bp GCCAGAGTAAACCAACATTATTTATGTAATGCCTGTTaGGTGATGCATATTTATGCAGCCATGTATGGTGAT +
Preference number: 3 (lower is better)
Translates to: ARVNQHYLCNAC*VMHIYAAMYGD
Trigger: ATCACCATACATGGCTGCATAAATATGCATCACTCAACAGGCATTACATAAATAATGTTGGTTTACTCTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGCTCGTCGTCCAGCTTaGCCTCGCCGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSARRPA*PRRRPP
Trigger: CGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCGGGAAGCGCGTCCACTaGCCCTCGGCGCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSGKRVH*PSAPGN
Trigger: GTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCC...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGCCAGGCGCCGTCGTTaGCCGGCGTGTCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSARRRR*PACRPT
Trigger: TGTTGGCCGACACGCCGGTCAACGACGGCGCCTGGC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGCTCGTCGTCCAGCTTaGCCTCGCCGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSARRPA*PRRRPP
Trigger: CGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATCTGGTGGGGTTGGCTaGGCTCGGCTCACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSSGGVG*ARLTGV
Trigger: GACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCGCCGCGCGTCAGGATaGGCTCGAGGAAGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSRRASG*ARGSRR
Trigger: TCTGCGACTTCCTCGAGCTCATCCTGACGCGCGGCG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGCCAGGCGCCGTCGTTaGCCGGCGTGTCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRARRRR*PACRPT
Trigger: TGTTGGCCGACACGCCGGTCAACGACGGCGCCTGGC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGCCAGGCGCCGTCGTTaGCCGGCGTGTCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIARRRR*PACRPT
Trigger: TGTTGGCCGACACGCCGGTCAACGACGGCGCCTGGC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCCACGAAGAGCCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSPRRAR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGGCTCTTCGTGG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCACTGGAAGGTCGGCTGTaGTGGGGCTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSLEGRL*WGCLQH
Trigger: ATGTTGGAGGCAGCCCCAGCACAGCCGACCTTCCAG...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGCGAGGCCGCGGGCACTaGGCGTCTTCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVRGRGH*ASSAGS
Trigger: GCTTCCAGCTGAAGACGCGCAGTGCCCGCGGCCTCG...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCTTGGCTGCAGTCCTTaGCACGGAAGCCGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSLGCSP*HGSRSS
Trigger: CGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCCTCTTGGCAGGTTGTaGTGGGCCCTTCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSPLGRL*WALRIL
Trigger: GAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGGGAAGCGCGTCCACTaGCCCTCGGCGCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPGKRVH*PSAPGN
Trigger: GTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTGTAGAGCGTGGTGTTaGGGAACTGGCGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSCRAWC*GTGGGC
Trigger: GCATCCGCCGCCAGTTCCGCAACACCACGCTCTACA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCTCTCTCACAGGACCTaGCGAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSLSHRT*RDSLFR
Trigger: CCGGAACAGGCTATCTCGGCAGGTCCTGTGAGAGAG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCTGCGCGTCTTCAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSLRVFS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTGAAGACGCGCAG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSCQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCGACTCTCATCCACGTaGTACGACCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSRLSST*YDPSSR
Trigger: CCGGGATGAAGGGTCGTACCACGTGGATGAGAGTCG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCTGCTGCCATGGAAATaGTGGATGTGGTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSLLPWK*WMWCAP
Trigger: GGGAGCGCACCACATCCACCATTTCCATGGCAGCAG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACCCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGCTCGTCGTCCAGCTTaGCCTCGCCGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEARRPA*PRRRPP
Trigger: CGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCCACGTAGCCGTAGTTaGGCAGAGCAGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSPRSRS*AEQSTP
Trigger: AGGTGTGGACTGCTCTGCTCAACTACGGCTACGTGG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGCAATAGGCACTGAATaGTGCTTGCTGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSAIGTE*CLLLPW
Trigger: CCATGGCAGCAGCAAGCATCATTCAGTGCCTATTGC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGGAACTCCAGCCCGCTaGCCAGCTCTGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPGTPAR*PALPSS
Trigger: GCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCCGAGGCCGCGGGCACTaGGCGTCTTCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSRGRGH*ASSAGS
Trigger: GCTTCCAGCTGAAGACGCGCAGTGCCCGCGGCCTCG...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTGACC +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNRMRTL*QAPSLT
Trigger: GGTCAACGACGGCGCCTGGCACAGCGTGCGCATCCG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCACGGCTGTGCTGGGGCTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSRLCWG*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGCCCCAGCACAGCCG...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCGTGGACATCTCAGACTaGATGGCAGTGGCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSVDISD*MAVAVD
Trigger: GTCGACAGCCACTGCCATGCAGTCTGAGATGTCCAC...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAAAATGGTGGATGTGGTaGGCTCCCAAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSKWWMW*APKLDA
Trigger: GGCATCCAGTTTGGGAGCGCACCACATCCACCATTT...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGGAAGCGCGTCCACTaGCCCTCGGCGCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESGKRVH*PSAPGN
Trigger: GTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGGGAAGCGCGTCCACTaGCCCTCGGCGCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVGKRVH*PSAPGN
Trigger: GTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGGAAGCGCGTCCACTaGCCCTCGGCGCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGKRVH*PSAPGN
Trigger: GTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATTTCGCCCGCCTCGCATaGGCTCCCGCCACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNFARLA*APATAV
Trigger: AACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAA...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTTCGCCCGCCTCGCATaGGCTCCCGCCACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPFARLA*APATAV
Trigger: AACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGAACATGAATCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCACAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSCQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCGCCGCGCGTCAGGATaGGCTCGAGGAAGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPRRASG*ARGSRR
Trigger: TCTGCGACTTCCTCGAGCTCATCCTGACGCGCGGCG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGCCAGGCGCCGTCGTTaGCCGGCGTGTCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIARRRR*PACRPT
Trigger: TGTTGGCCGACACGCCGGTCAACGACGGCGCCTGGC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCAGGCGCCGTCGTTaGCCGGCGTGTCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKARRRR*PACRPT
Trigger: TGTTGGCCGACACGCCGGTCAACGACGGCGCCTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCTCGTCGTCCAGCTTaGCCTCGCCGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESARRPA*PRRRPP
Trigger: CGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGCTCGTCGTCCAGCTTaGCCTCGCCGCCGTCCACCG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIARRPA*PRRRPP
Trigger: CGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGCTGATTTCCCTGTGTaGAGCATCAGTCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSADFPV*SISPFL
Trigger: AAGGAACGGACTGATGCTTCACACAGGGAAATCAGC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTGCTACAGTCACAGCTaGAGCCATCCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSCYSHS*SHPIAA
Trigger: TGCAGCAATGGGATGGCTTCAGCTGTGACTGTAGCA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCCAATGCCTGAGTGCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSPMPEC*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGCACTCAGGCATTGG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAACTGGCGGCGGATaGGCACGCTGTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKGTGGG*ARCARR
Trigger: GCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGTGGACATCTCAGACTaGATGGCAGTGGCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSVDISD*MAVAVD
Trigger: GTCGACAGCCACTGCCATGCAGTCTGAGATGTCCAC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTTGTCTGCTCGTGTACTaGGGCGGTCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRCLLVY*GGHWEA
Trigger: GGCCTCCCAATGACCGCCCCAGTACACGAGCAGACA...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSPLWRC*HRSLLP
Trigger: TGGCAGCAGAGAACGATGCCAACATCGCCATAGTGG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGCCGCGCGTCAGGATaGGCTCGAGGAAGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLERRASG*ARGSRR
Trigger: TCTGCGACTTCCTCGAGCTCATCCTGACGCGCGGCG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCCACGTAGCCGTAGTTaGGCAGAGCAGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRPRSRS*AEQSTP
Trigger: AGGTGTGGACTGCTCTGCTCAACTACGGCTACGTGG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTACTCCAGCAGTGCTCTaGATTTCCGCCATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRTPAVL*ISAICR
Trigger: CCGGCAGATGGCGGAAATTCAGAGCACTGCTGGAGT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTGCTACAGTCACAGCTaGAGCCATCCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSCYSHS*SHPIAA
Trigger: TGCAGCAATGGGATGGCTTCAGCTGTGACTGTAGCA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCAC +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVVVTQS*GTVHTH
Trigger: GTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTAC...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGAACTCCAGCCCGCTaGCCAGCTCTGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGTPAR*PALPSS
Trigger: GCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGAACTCCAGCCCGCTaGCCAGCTCTGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESGTPAR*PALPSS
Trigger: GCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAACTCCAGCCCGCTaGCCAGCTCTGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKGTPAR*PALPSS
Trigger: GCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGAGGCCGCGGGCACTaGGCGTCTTCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRGRGH*ASSAGS
Trigger: GCTTCCAGCTGAAGACGCGCAGTGCCCGCGGCCTCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGAGGCCGCGGGCACTaGGCGTCTTCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRGRGH*ASSAGS
Trigger: GCTTCCAGCTGAAGACGCGCAGTGCCCGCGGCCTCG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGGATGCGCACGCTGTaGCAGGCGCCGTCGTTGACC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRMRTL*QAPSLT
Trigger: GGTCAACGACGGCGCCTGGCACAGCGTGCGCATCCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTGACC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVRMRTL*QAPSLT
Trigger: GGTCAACGACGGCGCCTGGCACAGCGTGCGCATCCG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTGACC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRMRTL*QAPSLT
Trigger: GGTCAACGACGGCGCCTGGCACAGCGTGCGCATCCG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCTTGGCTGCAGTCCTTaGCACGGAAGCCGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNLGCSP*HGSRSS
Trigger: CGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCAGCACGCGTTCCACTTaGGGAAGCGCGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSSTRST*GSASTG
Trigger: GCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTAGCACGCGTTCCACTTaGGGAAGCGCGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPSTRST*GSASTG
Trigger: GCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCT...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTCGCCCGCCTCGCATaGGCTCCCGCCACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKFARLA*APATAV
Trigger: AACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTCGCCCGCCTCGCATaGGCTCCCGCCACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESFARLA*APATAV
Trigger: AACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTTCGCCCGCCTCGCATaGGCTCCCGCCACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVFARLA*APATAV
Trigger: AACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCAGTCGCATACGGCCTaGTCGTCGACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGAAGGTCGGCTGTGCTaGGGCTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHREGRLC*GCLQHR
Trigger: TCTATGTTGGAGGCAGCCCCAGCACAGCCGACCTTC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCAGGATGAGGCCATTTaGCTCCGTTGTACGGAAATC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSQDEAI*LRCTEI
Trigger: GATTTCCGTACAACGGAGCCAAATGGCCTCATCCTG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSPLWRC*HRSLLP
Trigger: TGGCAGCAGAGAACGATGCCAACATCGCCATAGTGG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATCACATTCCCCACTATaGCGATGTTGGCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSSHSPL*RCWHRS
Trigger: AGAACGATGCCAACATCGCCATAGTGGGGAATGTGA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAATGTCATCTGTGGTCTaGCTGATGGGTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSMSSVV*LMGSFV
Trigger: CACAAAGGAACCCATCAGCCAGACCACAGATGACAT...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNICPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGCCGCGCGTCAGGATaGGCTCGAGGAAGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRRASG*ARGSRR
Trigger: TCTGCGACTTCCTCGAGCTCATCCTGACGCGCGGCG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGAAGATGGAGAAGCTaGGCTGCAGGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRRWRS*AAGGRR
Trigger: GCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACTCCAGCCTTGTATaGTCACCTGCCATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSNSSLV*SPAIWP
Trigger: AGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTT...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTTTGCAGGTGCCCAATaGAATTGGAGGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSFAGAQ*NWRGQK
Trigger: CTTCTGTCCCCTCCAATTTCATTGGGCACCTGCAAA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSLWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTCTGGTGGGGTTGGCTaGGCTCGGCTCACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSGGVG*ARLTGV
Trigger: GACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCTGGTGGGGTTGGCTaGGCTCGGCTCACAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKSGGVG*ARLTGV
Trigger: GACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCCAATGCCTGAGTGCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRPMPEC*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGCACTCAGGCATTGG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCTGGAAGGTCGGCTGTaGTGGGGCTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPLEGRL*WGCLQH
Trigger: ATGTTGGAGGCAGCCCCAGCACAGCCGACCTTCCAG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGCTTCACTCCAGCAGTaGTCTGAATTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSASLQQ*SEFPPS
Trigger: AGATGGCGGAAATTCAGAGCACTGCTGGAGTGAAGC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGTAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSVAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCAATCGAAGGGTGTCTaGAGAGTCTCTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSQSKGV*RVSRSG
Trigger: ACCACTTCTAGAGACTCTGCAGACACCCTTCGATTG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATCTCAATTTGCCCATTaGAGAAGAGAGCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSSQFAH*RREHPR
Trigger: TCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGTGGACATCTCAGACTaGATGGCAGTGGCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDVDISD*MAVAVD
Trigger: GTCGACAGCCACTGCCATGCAGTCTGAGATGTCCAC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGCAATCCCCACCACCATaGCAGTGGTACTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVQSPPP*QWYCWT
Trigger: AGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTG...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGTGGTGTTGCGGAACTaGCGGCGGATGCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVVVLRN*RRMRTL
Trigger: CAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACAGTCGCATACGGCCTaGTCGTCGACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTCTGCTCGTGTACTaGGGCGGTCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSCLLVY*GGHWEA
Trigger: GGCCTCCCAATGACCGCCCCAGTACACGAGCAGACA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATG +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSNTASF*TVLNPM
Trigger: CATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTT...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAACTCCAATTTTTCCTTaGTGTATGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSTPIFP*CMCSSR
Trigger: CCTGGAGCTGCACATACACCAAGGAAAAATTGGAGT...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTGGCCCTGGAAGGGCTaGCCCTGCTCTTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVWPWKG*PCSFPP
Trigger: TGGCGGGAAAGAGCAGGGCCAGCCCTTCCAGGGCCA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTCACATTCCCCACTATaGCGATGTTGGCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSSHSPL*RCWHRS
Trigger: AGAACGATGCCAACATCGCCATAGTGGGGAATGTGA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACCCTGCGCTTGGACTTaGCCTCCACCCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIPCAWT*PPPTWP
Trigger: AGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCACGAAGAGCCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPRRAR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGGCTCTTCGTGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACCACGAAGAGCCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIPRRAR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGGCTCTTCGTGG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCCACGAAGAGCCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVPRRAR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGGCTCTTCGTGG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCAAGAATTCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSKNSIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGAATTCTT...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072671.14
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTGCTTGGCATCCTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAGGATGCCAAGCA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATGCTTGGCATCCTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNICLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAGGATGCCAAGCA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCCACGTAGCCGTAGTTaGGCAGAGCAGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPPRSRS*AEQSTP
Trigger: AGGTGTGGACTGCTCTGCTCAACTACGGCTACGTGG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTACTCCAGCAGTGCTCTaGATTTCCGCCATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPTPAVL*ISAICR
Trigger: CCGGCAGATGGCGGAAATTCAGAGCACTGCTGGAGT...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCACTCCAGCAGTGCTCTaGATTTCCGCCATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSTPAVL*ISAICR
Trigger: CCGGCAGATGGCGGAAATTCAGAGCACTGCTGGAGT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGATGCCAGGCAACCTTaGAAGCCTTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRDARQP*KPSLAW
Trigger: CCATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCAC +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNVVTQS*GTVHTH
Trigger: GTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTAC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCAC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSVVTQS*GTVHTH
Trigger: GTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTAC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCAC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVVTQS*GTVHTH
Trigger: GTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTGCCACCACTCCTTGTaGAACGTACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSCHHSL*NVLHGI
Trigger: AATACCATGTAGTACGTTTCACAAGGAGTGGTGGCA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRGGLHD*GGHLRL
Trigger: CAGTCTGAGATGTCCACCTCAATCATGGAGACCACC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCAT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSTVLSY*CSFDSH
Trigger: ATGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAGGAACTCCAGCCCGCTaGCCAGCTCTGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIGTPAR*PALPSS
Trigger: GCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCC...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTMEKLS*RRPPRV
Trigger: GACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCAT...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATACGGATGCGCACGCTGTaGCAGGCGCCGTCGTTGACC +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIRMRTL*QAPSLT
Trigger: GGTCAACGACGGCGCCTGGCACAGCGTGCGCATCCG...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATGTAGAGCGTGGTGTTaGGGAACTGGCGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLECRAWC*GTGGGC
Trigger: GCATCCGCCGCCAGTTCCGCAACACCACGCTCTACA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACTTGGCTGCAGTCCTTaGCACGGAAGCCGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILGCSP*HGSRSS
Trigger: CGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTTGGCTGCAGTCCTTaGCACGGAAGCCGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLGCSP*HGSRSS
Trigger: CGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCTTGGCTGCAGTCCTTaGCACGGAAGCCGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLGCSP*HGSRSS
Trigger: CGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACTGGAAGGTCGGCTGTaGTGGGGCTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLELEGRL*WGCLQH
Trigger: ATGTTGGAGGCAGCCCCAGCACAGCCGACCTTCCAG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCCTCTCTCACAGGACCTaGCGAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSLSHRT*RDSLFR
Trigger: CCGGAACAGGCTATCTCGGCAGGTCCTGTGAGAGAG...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCTCTCTCACAGGACCTaGCGAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNLSHRT*RDSLFR
Trigger: CCGGAACAGGCTATCTCGGCAGGTCCTGTGAGAGAG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGTCAGGCTTTGCAGGTaGCCAATGAAATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDVRLCR*PMKLEG
Trigger: CCCCTCCAATTTCATTGGGCACCTGCAAAGCCTGAC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACCTCTTGGCAGGTTGTaGTGGGCCCTTCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEPLGRL*WALRIL
Trigger: GAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPDGQPV*SCTGAV
Trigger: GACCGCCCCAGTACACGAGCAGACAGGCTGGCCATC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAATGGTGGATGTGGTaGGCTCCCAAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDKWWMW*APKLDA
Trigger: GGCATCCAGTTTGGGAGCGCACCACATCCACCATTT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGCACGCGTTCCACTTaGGGAAGCGCGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKSTRST*GSASTG
Trigger: GCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAGCACGCGTTCCACTTaGGGAAGCGCGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSTRST*GSASTG
Trigger: GCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCTGCGCGTCTTCAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPLRVFS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTGAAGACGCGCAG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCTGCGCGTCTTCAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNLRVFS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTGAAGACGCGCAG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATATTCGCCCGCCTCGCATaGGCTCCCGCCACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIFARLA*APATAV
Trigger: AACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAA...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACAGTCGCATACGGCCTaGTCGTCGACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCAGTCGCATACGGCCTaGTCGTCGACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGTCGCATACGGCCTaGTCGTCGACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCAGTCGCATACGGCCTaGTCGTCGACCACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESQSHTA*SSTTEH
Trigger: GTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGAAGGTCGGCTGTGCTaGGGCTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNEGRLC*GCLQHR
Trigger: TCTATGTTGGAGGCAGCCCCAGCACAGCCGACCTTC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACATACCATATGCACGCTaGGATCGGAACCGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDIPYAR*DRNRKD
Trigger: GTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTAT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCTTGGCAGGTTGTGCTaGGCCCTTCGCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNLGRLC*ALRILS
Trigger: AGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGAACATGAATCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVPLWRC*HRSLLP
Trigger: TGGCAGCAGAGAACGATGCCAACATCGCCATAGTGG...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRPLWRC*HRSLLP
Trigger: TGGCAGCAGAGAACGATGCCAACATCGCCATAGTGG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACCAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATACAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCATGTCATCTGTGGTCTaGCTGATGGGTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSMSSVV*LMGSFV
Trigger: CACAAAGGAACCCATCAGCCAGACCACAGATGACAT...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSCPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPCPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCCTGCTGCCATGGAAATaGTGGATGTGGTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSLLPWK*WMWCAP
Trigger: GGGAGCGCACCACATCCACCATTTCCATGGCAGCAG...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAATCAGTCCGTTCCTTTaGAGAGTTTTAAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSISPFL*RVLKDR
Trigger: TCTGTCCTTTAAAACTCTTCAAAGGAACGGACTGAT...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGAGTGCGTAGTGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRECVVC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACACTACGCACTC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTAACTCCAGCCTTGTATaGTCACCTGCCATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRNSSLV*SPAIWP
Trigger: AGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGAACTCCAGCCTTGTATaGTCACCTGCCATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVNSSLV*SPAIWP
Trigger: AGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTT...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGCCACTGATTGTCGTTaGGTGGTTTGTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDATDCR*VVCLSS
Trigger: GGAGCTCAAACAAACCACTCAACGACAATCAGTGGC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTTTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNILWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCCAATGCCTGAGTGCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNPMPEC*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGCACTCAGGCATTGG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGTAGAGCGTGGTGTTaGGGAACTGGCGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCRAWC*GTGGGC
Trigger: GCATCCGCCGCCAGTTCCGCAACACCACGCTCTACA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTGTAGAGCGTGGTGTTaGGGAACTGGCGGCGGATGC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPCRAWC*GTGGGC
Trigger: GCATCCGCCGCCAGTTCCGCAACACCACGCTCTACA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGGAAGGTCGGCTGTaGTGGGGCTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLEGRL*WGCLQH
Trigger: ATGTTGGAGGCAGCCCCAGCACAGCCGACCTTCCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACTGGAAGGTCGGCTGTaGTGGGGCTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILEGRL*WGCLQH
Trigger: ATGTTGGAGGCAGCCCCAGCACAGCCGACCTTCCAG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGTAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDVAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCCTTGTATGATCACCTaGCATTTGGCCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRPCMIT*HLACHG
Trigger: GCCATGACAGGCCAAATGGCAGGTGATCATACAAGG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATACCTTGTATGATCACCTaGCATTTGGCCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIPCMIT*HLACHG
Trigger: GCCATGACAGGCCAAATGGCAGGTGATCATACAAGG...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCATCCTCTCTCAATTTaGCCATTGCAGAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSHPLSI*PLQKRA
Trigger: TGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCTCTTGGCAGGTTGTaGTGGGCCCTTCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPLGRL*WALRIL
Trigger: GAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACCTCTTGGCAGGTTGTaGTGGGCCCTTCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIPLGRL*WALRIL
Trigger: GAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGTGGACATCTCAGACTaGATGGCAGTGGCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNVDISD*MAVAVD
Trigger: GTCGACAGCCACTGCCATGCAGTCTGAGATGTCCAC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCAATCCCCACCACCATaGCAGTGGTACTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNQSPPP*QWYCWT
Trigger: AGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGTCGATGTAGAGCGTaGTGTTGCGGAACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKGRCRA*CCGTGG
Trigger: GCCGCCAGTTCCGCAACACCACGCTCTACATCGACC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGGTCGATGTAGAGCGTaGTGTTGCGGAACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPGRCRA*CCGTGG
Trigger: GCCGCCAGTTCCGCAACACCACGCTCTACATCGACC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGTCGATGTAGAGCGTaGTGTTGCGGAACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESGRCRA*CCGTGG
Trigger: GCCGCCAGTTCCGCAACACCACGCTCTACATCGACC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGGTCGATGTAGAGCGTaGTGTTGCGGAACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVGRCRA*CCGTGG
Trigger: GCCGCCAGTTCCGCAACACCACGCTCTACATCGACC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCAGGATGAGGCCATTTaGCTCCGTTGTACGGAAATC +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRQDEAI*LRCTEI
Trigger: GATTTCCGTACAACGGAGCCAAATGGCCTCATCCTG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATGTCTTGGCTTGCCATaGCTAAACAGGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNICLGLP*LNRMRP
Trigger: TGGCCTCATCCTGTTTAGCCATGGCAAGCCAAGACA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGCCAGCCTTATTTTCTaGCAAGCCACCCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIASLIF*QATQVQ
Trigger: TTGTACCTGGGTGGCTTGCCAGAAAATAAGGCTGGC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCATCACCACCGGAAGCTaGATTTTCATGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSITTGS*IFMNML
Trigger: GAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGAT...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACTTGGCAGGTTGTGCTaGGCCCTTCGCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLELGRLC*ALRILS
Trigger: AGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTAGGGTCATTGCAGAGTaGGCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRRVIAE*ATEGSH
Trigger: ATGACTTCCTTCAGTGGCCCACTCTGCAATGACCCT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGTCTGCTCGTGTACTaGGGCGGTCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFICLLVY*GGHWEA
Trigger: GGCCTCCCAATGACCGCCCCAGTACACGAGCAGACA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTGTCTGCTCGTGTACTaGGGCGGTCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPCLLVY*GGHWEA
Trigger: GGCCTCCCAATGACCGCCCCAGTACACGAGCAGACA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGTCTGCTCGTGTACTaGGGCGGTCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCLLVY*GGHWEA
Trigger: GGCCTCCCAATGACCGCCCCAGTACACGAGCAGACA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTGTCTGCTCGTGTACTaGGGCGGTCATTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVCLLVY*GGHWEA
Trigger: GGCCTCCCAATGACCGCCCCAGTACACGAGCAGACA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCACTCCAATTTTTCCTTaGTGTATGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSTPIFP*CMCSSR
Trigger: CCTGGAGCTGCACATACACCAAGGAAAAATTGGAGT...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLECPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPCQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATGGAAATGGTGGATGTaGTGCGCTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIWKWWM*CAPKLD
Trigger: ATCCAGTTTGGGAGCGCACCACATCCACCATTTCCA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCACGTAGCCGTAGTTaGGCAGAGCAGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPRSRS*AEQSTP
Trigger: AGGTGTGGACTGCTCTGCTCAACTACGGCTACGTGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCCACGTAGCCGTAGTTaGGCAGAGCAGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVPRSRS*AEQSTP
Trigger: AGGTGTGGACTGCTCTGCTCAACTACGGCTACGTGG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCACGTAGCCGTAGTTaGGCAGAGCAGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKPRSRS*AEQSTP
Trigger: AGGTGTGGACTGCTCTGCTCAACTACGGCTACGTGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACTCCAGCAGTGCTCTaGATTTCCGCCATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESTPAVL*ISAICR
Trigger: CCGGCAGATGGCGGAAATTCAGAGCACTGCTGGAGT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAACTCCAGCAGTGCTCTaGATTTCCGCCATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFITPAVL*ISAICR
Trigger: CCGGCAGATGGCGGAAATTCAGAGCACTGCTGGAGT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAATTGCTGGTGTCCCGTaGAATCATCACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIIAGVP*NHHIVP
Trigger: TGGCACAATGTGATGATTTCACGGGACACCAGCAAT...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTATACAAGTCACTCTTaGGGTCTAGATTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSYTSHS*GLDFWL
Trigger: GAGCCAGAAATCTAGACCTCAAGAGTGACTTGTATA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGATGCCAGGCAACCTTaGAAGCCTTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSDARQP*KPSLAW
Trigger: CCATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTGCTACAGTCACAGCTaGAGCCATCCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPCYSHS*SHPIAA
Trigger: TGCAGCAATGGGATGGCTTCAGCTGTGACTGTAGCA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCAC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVVTQS*GTVHTH
Trigger: GTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNGGLHD*GGHLRL
Trigger: CAGTCTGAGATGTCCACCTCAATCATGGAGACCACC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACTCTCTCACAGGACCTaGCGAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILSHRT*RDSLFR
Trigger: CCGGAACAGGCTATCTCGGCAGGTCCTGTGAGAGAG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTCTCTCACAGGACCTaGCGAGATAGCCTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLSHRT*RDSLFR
Trigger: CCGGAACAGGCTATCTCGGCAGGTCCTGTGAGAGAG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTCAGGCTTTGCAGGTaGCCAATGAAATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVRLCR*PMKLEG
Trigger: CCCCTCCAATTTCATTGGGCACCTGCAAAGCCTGAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGCGCGTCTTCAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLRVFS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTGAAGACGCGCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCTGCGCGTCTTCAGCTaGAAGCTCATCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLRVFS*KLISLS
Trigger: CGAGAGCGAGATGAGCTTCCAGCTGAAGACGCGCAG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATACATCAGACCCCAGCATaGTGTAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIHQTPA*CNLLAC
Trigger: ACACGCAAGAAGATTACACCATGCTGGGGTCTGATG...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCATCAGACCCCAGCATaGTGTAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRHQTPA*CNLLAC
Trigger: ACACGCAAGAAGATTACACCATGCTGGGGTCTGATG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGAAGGTCGGCTGTGCTaGGGCTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESEGRLC*GCLQHR
Trigger: TCTATGTTGGAGGCAGCCCCAGCACAGCCGACCTTC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGAAGGTCGGCTGTGCTaGGGCTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIEGRLC*GCLQHR
Trigger: TCTATGTTGGAGGCAGCCCCAGCACAGCCGACCTTC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGAAGGTCGGCTGTGCTaGGGCTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPEGRLC*GCLQHR
Trigger: TCTATGTTGGAGGCAGCCCCAGCACAGCCGACCTTC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGTCATCTGTGGGTGCTTaGCATCCTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVSSVGA*HPSDVL
Trigger: CAAGACATCAGAAGGATGCCAAGCACCCACAGATGA...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGGCATGGACCAGTTTTaGCAGGGATTTATATGTTTC +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSGMDQF*QGFICF
Trigger: GAAACATATAAATCCCTGCCAAAACTGGTCCATGCC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTTGGCAGGTTGTGCTaGGCCCTTCGCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLGRLC*ALRILS
Trigger: AGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACTTGGCAGGTTGTGCTaGGCCCTTCGCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILGRLC*ALRILS
Trigger: AGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCTTGGCAGGTTGTGCTaGGCCCTTCGCATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLGRLC*ALRILS
Trigger: AGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGAACATGAATCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATG +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVNTASF*TVLNPM
Trigger: CATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTT...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTCCACCTGTAACGTaGCATTGCCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSCPPVT*HCHHSL
Trigger: CAAGGAGTGGTGGCAATGCCACGTTACAGGTGGACA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPPLWRC*HRSLLP
Trigger: TGGCAGCAGAGAACGATGCCAACATCGCCATAGTGG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATCACATTCCCCACTATaGCGATGTTGGCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNISHSPL*RCWHRS
Trigger: AGAACGATGCCAACATCGCCATAGTGGGGAATGTGA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTCACATTCCCCACTATaGCGATGTTGGCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDSHSPL*RCWHRS
Trigger: AGAACGATGCCAACATCGCCATAGTGGGGAATGTGA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTATGTCATCTGTGGTCTaGCTGATGGGTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRMSSVV*LMGSFV
Trigger: CACAAAGGAACCCATCAGCCAGACCACAGATGACAT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFICPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPCPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKCPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACGACTCTCATCCACGTaGTACGACCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIRLSST*YDPSSR
Trigger: CCGGGATGAAGGGTCGTACCACGTGGATGAGAGTCG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGACTCTCATCCACGTaGTACGACCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRLSST*YDPSSR
Trigger: CCGGGATGAAGGGTCGTACCACGTGGATGAGAGTCG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGACTCTCATCCACGTaGTACGACCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVRLSST*YDPSSR
Trigger: CCGGGATGAAGGGTCGTACCACGTGGATGAGAGTCG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGACTCTCATCCACGTaGTACGACCCTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRLSST*YDPSSR
Trigger: CCGGGATGAAGGGTCGTACCACGTGGATGAGAGTCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCTGCCATGGAAATGGTaGATGTGGTGCGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNLPWKW*MWCAPK
Trigger: TTTGGGAGCGCACCACATCCACCATTTCCATGGCAG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGCTGCCATGGAAATaGTGGATGTGGTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLLPWK*WMWCAP
Trigger: GGGAGCGCACCACATCCACCATTTCCATGGCAGCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGCCACGAAGAGCCCGCTaGACACCGTCATGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQPRRAR*TPSCPC
Trigger: GCAGGGACATGACGGTGTTCAGCGGGCTCTTCGTGG...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGTTACTGACTGGTaGCCCTGGAAGGTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVVTDW*PWKVGC
Trigger: ACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAAGCCACCACACCGTaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDKATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATTCACGGTGTGGTGGCTTT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACCGTTGGAAATCCACGTaGTACCATTCTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDRWKST*YHSPSL
Trigger: CAATGATGGAGAATGGTATCACGTGGATTTCCAACG...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATACGTTGGAAATCCACGTaGTACCATTCTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIRWKST*YHSPSL
Trigger: CAATGATGGAGAATGGTATCACGTGGATTTCCAACG...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCGCCATTCATTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSAIHYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAATGAATGGC...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTTGCAGGTGCCCAATaGAATTGGAGGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSFAGAQ*NWRGQK
Trigger: CTTCTGTCCCCTCCAATTTCATTGGGCACCTGCAAA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGTTGAGTGGTTTGTTTaGGCTCCCTTTGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDVEWFV*APFDEV
Trigger: AACCTCATCAAAGGGAGCTCAAACAAACCACTCAAC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGCCACTGATTGTCGTTaGGTGGTTTGTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPATDCR*VVCLSS
Trigger: GGAGCTCAAACAAACCACTCAACGACAATCAGTGGC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTGCCACCACTCCTTGTaGAACGTACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDCHHSL*NVLHGI
Trigger: AATACCATGTAGTACGTTTCACAAGGAGTGGTGGCA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGTGCCACCACTCCTTGTaGAACGTACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVCHHSL*NVLHGI
Trigger: AATACCATGTAGTACGTTTCACAAGGAGTGGTGGCA...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEGGLHD*GGHLRL
Trigger: CAGTCTGAGATGTCCACCTCAATCATGGAGACCACC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATTTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNLWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSLWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTCGCAAGGATGCTGGTaGCCTGTAGATTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPSQGCW*PVDCNR
Trigger: CCTATTGCAATCTACAGGTCACCAGCATCCTTGCGA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGGCTGTGCTGGGGCTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLERLCWG*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGCCCCAGCACAGCCG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGTAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSVAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCCTTGTATGATCACCTaGCATTTGGCCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNPCMIT*HLACHG
Trigger: GCCATGACAGGCCAAATGGCAGGTGATCATACAAGG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCGCACAAGTCTATGTATaGCATTCCATTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSAQVYV*HSIKCQ
Trigger: CTGACATTTAATGGAATGGCATACATAGACTTGTGC...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATTACTGTGTGGAGATTaGTGGTGTCCCGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNILLCGD*WCPVKS
Trigger: TGATTTCACGGGACACCAGCAATCTCCACACAGTAA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTCTCAATTTGCCCATTaGAGAAGAGAGCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDSQFAH*RREHPR
Trigger: TCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATACATCCTCTCTCAATTTaGCCATTGCAGAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIHPLSI*PLQKRA
Trigger: TGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATG...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATACCTCTTGGCAGGTTGTaGTGGGCCCTTCGCATCCTC +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIPLGRL*WALRIL
Trigger: GAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGG...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: PTDWLLRKALALWLNPGSANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTGGACATCTCAGACTaGATGGCAGTGGCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVDISD*MAVAVD
Trigger: GTCGACAGCCACTGCCATGCAGTCTGAGATGTCCAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGTGGACATCTCAGACTaGATGGCAGTGGCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPVDISD*MAVAVD
Trigger: GTCGACAGCCACTGCCATGCAGTCTGAGATGTCCAC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGACATCTCAGACTaGATGGCAGTGGCTGTCGAC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVDISD*MAVAVD
Trigger: GTCGACAGCCACTGCCATGCAGTCTGAGATGTCCAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAATCCCCACCACCATaGCAGTGGTACTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKQSPPP*QWYCWT
Trigger: AGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCAATCCCCACCACCATaGCAGTGGTACTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESQSPPP*QWYCWT
Trigger: AGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACAATCCCCACCACCATaGCAGTGGTACTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIQSPPP*QWYCWT
Trigger: AGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTGCACAGAGCGGCTGCTaGGACAATCCCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTAQSGC*DNPHHH
Trigger: ATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGTGC...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTATGTCATCTGTGGTCTaGGAGTTTTCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRMSSVV*EFSQCH
Trigger: ATGGCACTGTGAAAACTCGCAGACCACAGATGACAT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173917.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGAGCACGCGTTCCACTTaGGGAAGCGCGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQSTRST*GSASTG
Trigger: GCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCT...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSTLLSS*LQSLPR
Trigger: CCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATACCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIPLLLP*SPIIRC
Trigger: ACACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTCTTGGCTTGCCATaGCTAAACAGGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSCLGLP*LNRMRP
Trigger: TGGCCTCATCCTGTTTAGCCATGGCAAGCCAAGACA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAATCCTTCTGATGTCTTaGCTTGCCATGGCTAAACAG +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIILLMS*LAMAKQ
Trigger: CTGTTTAGCCATGGCAAGCCAAGACATCAGAAGGAT...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACATCCTTCTGATGTCTTaGCTTGCCATGGCTAAACAG +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDILLMS*LAMAKQ
Trigger: CTGTTTAGCCATGGCAAGCCAAGACATCAGAAGGAT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGAGGAGGTACAAGTaGCCATCCAGCATCTCAATA +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDKRRYK*PSSISI
Trigger: TATTGAGATGCTGGATGGCCACTTGTACCTCCTCTT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGCCAGCCTTATTTTCTaGCAAGCCACCCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNASLIF*QATQVQ
Trigger: TTGTACCTGGGTGGCTTGCCAGAAAATAAGGCTGGC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGCCAGCCTTATTTTCTaGCAAGCCACCCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSASLIF*QATQVQ
Trigger: TTGTACCTGGGTGGCTTGCCAGAAAATAAGGCTGGC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAATACCATATGCACGCTaGGATCGGAACCGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEIPYAR*DRNRKD
Trigger: GTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTAT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACACTCCAATTTTTCCTTaGTGTATGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDTPIFP*CMCSSR
Trigger: CCTGGAGCTGCACATACACCAAGGAAAAATTGGAGT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAACTCCAATTTTTCCTTaGTGTATGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNITPIFP*CMCSSR
Trigger: CCTGGAGCTGCACATACACCAAGGAAAAATTGGAGT...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATGTCCACCTGTAACGTaGCATTGCCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLECPPVT*HCHHSL
Trigger: CAAGGAGTGGTGGCAATGCCACGTTACAGGTGGACA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEPLWRC*HRSLLP
Trigger: TGGCAGCAGAGAACGATGCCAACATCGCCATAGTGG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKCQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFICQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPCQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVCQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCAAGGATGTCATCTGTaGTCTGCGAGTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRQGCHL*SASFHS
Trigger: ACTGTGAAAACTCGCAGACCACAGATGACATCCTTG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173917.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGCTTGGCATCCTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAGGATGCCAAGCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGCTTGGCATCCTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKCLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAGGATGCCAAGCA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCATTGCTGGTGTCCCGTaGAATCATCACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSIAGVP*NHHIVP
Trigger: TGGCACAATGTGATGATTTCACGGGACACCAGCAAT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGTATACAAGTCACTCTTaGGGTCTAGATTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVYTSHS*GLDFWL
Trigger: GAGCCAGAAATCTAGACCTCAAGAGTGACTTGTATA...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGATGCCAGGCAACCTTaGAAGCCTTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIDARQP*KPSLAW
Trigger: CCATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGATGCCAGGCAACCTTaGAAGCCTTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPDARQP*KPSLAW
Trigger: CCATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGATGCCAGGCAACCTTaGAAGCCTTCTTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKDARQP*KPSLAW
Trigger: CCATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGCTACAGTCACAGCTaGAGCCATCCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCYSHS*SHPIAA
Trigger: TGCAGCAATGGGATGGCTTCAGCTGTGACTGTAGCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGCTACAGTCACAGCTaGAGCCATCCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFICYSHS*SHPIAA
Trigger: TGCAGCAATGGGATGGCTTCAGCTGTGACTGTAGCA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTGCTACAGTCACAGCTaGAGCCATCCCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVCYSHS*SHPIAA
Trigger: TGCAGCAATGGGATGGCTTCAGCTGTGACTGTAGCA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGGLHD*GGHLRL
Trigger: CAGTCTGAGATGTCCACCTCAATCATGGAGACCACC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVGGLHD*GGHLRL
Trigger: CAGTCTGAGATGTCCACCTCAATCATGGAGACCACC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESGGLHD*GGHLRL
Trigger: CAGTCTGAGATGTCCACCTCAATCATGGAGACCACC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCAT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRTVLSY*CSFDSH
Trigger: ATGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCAATAGGCACTGAATaGTGCTTGCTGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKAIGTE*CLLLPW
Trigger: CCATGGCAGCAGCAAGCATCATTCAGTGCCTATTGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATCGCAAGGATGCTGGTaGCCTGTAGATTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLESQGCW*PVDCNR
Trigger: CCTATTGCAATCTACAGGTCACCAGCATCCTTGCGA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACGGCTGTGCTGGGGCTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIRLCWG*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGCCCCAGCACAGCCG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGGCTGTGCTGGGGCTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRLCWG*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGCCCCAGCACAGCCG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGGCTGTGCTGGGGCTaGCTCCAACATAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRLCWG*LQHRKS
Trigger: ACTTTTTCTATGTTGGAGGCAGCCCCAGCACAGCCG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGCTGGAAGGTCGGCTGTaGTGGGGCTGCCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQLEGRL*WGCLQH
Trigger: ATGTTGGAGGCAGCCCCAGCACAGCCGACCTTCCAG...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAGCCATCTCTGCACATaGCATTGTTTTTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNISHLCT*HCFCKD
Trigger: ATCCTTGCAAAAACAATGGCATGTGCAGAGATGGCT...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATCAGGATACCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKHQDTI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGTATCCTGATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCATCAGGATACCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESHQDTI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGTATCCTGATG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACATCAGGATACCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIHQDTI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGTATCCTGATG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCCAATCGAAGGGTGTCTaGAGAGTCTCTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSQSKGV*RVSRSG
Trigger: ACCACTTCTAGAGACTCTGCAGACACCCTTCGATTG...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCAATCGAAGGGTGTCTaGAGAGTCTCTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPQSKGV*RVSRSG
Trigger: ACCACTTCTAGAGACTCTGCAGACACCCTTCGATTG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCAGGCTTTGCAGGTaGCCAATGAAATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVRLCR*PMKLEG
Trigger: CCCCTCCAATTTCATTGGGCACCTGCAAAGCCTGAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTCAGGCTTTGCAGGTaGCCAATGAAATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVRLCR*PMKLEG
Trigger: CCCCTCCAATTTCATTGGGCACCTGCAAAGCCTGAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAATGGTGGATGTGGTaGGCTCCCAAACTGGATGCC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIKWWMW*APKLDA
Trigger: GGCATCCAGTTTGGGAGCGCACCACATCCACCATTT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTGAAGGTCGGCTGTGCTaGGGCTGCCTCCAACATAGA +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTEGRLC*GCLQHR
Trigger: TCTATGTTGGAGGCAGCCCCAGCACAGCCGACCTTC...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATACCATATGCACGCTaGGATCGGAACCGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESIPYAR*DRNRKD
Trigger: GTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGAACATGAATCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAACATGAATCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAAGGGTCATTGCAGAGTaGGCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLERVIAE*ATEGSH
Trigger: ATGACTTCCTTCAGTGGCCCACTCTGCAATGACCCT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPNTASF*TVLNPM
Trigger: CATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTT...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNNTASF*TVLNPM
Trigger: CATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTCCACCTGTAACGTaGCATTGCCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKCPPVT*HCHHSL
Trigger: CAAGGAGTGGTGGCAATGCCACGTTACAGGTGGACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGTCCACCTGTAACGTaGCATTGCCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFICPPVT*HCHHSL
Trigger: CAAGGAGTGGTGGCAATGCCACGTTACAGGTGGACA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTGTCCACCTGTAACGTaGCATTGCCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVCPPVT*HCHHSL
Trigger: CAAGGAGTGGTGGCAATGCCACGTTACAGGTGGACA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGTCCACCTGTAACGTaGCATTGCCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCPPVT*HCHHSL
Trigger: CAAGGAGTGGTGGCAATGCCACGTTACAGGTGGACA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LAPQESASTLAESRIIGSIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPLWRC*HRSLLP
Trigger: TGGCAGCAGAGAACGATGCCAACATCGCCATAGTGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACAGACTGCATGGCAGTaGCTGTCGACTCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIQTAWQ*LSTQLS
Trigger: TGACAACTGAGTCGACAGCCACTGCCATGCAGTCTG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTTGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTCPHRH*DTLPRP
Trigger: TGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACA...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGCCATGGAAATGGTaGATGTGGTGCGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLPWKW*MWCAPK
Trigger: TTTGGGAGCGCACCACATCCACCATTTCCATGGCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTGCCATGGAAATGGTaGATGTGGTGCGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLPWKW*MWCAPK
Trigger: TTTGGGAGCGCACCACATCCACCATTTCCATGGCAG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTAGTATTCAGATCCCTTaGACGTGGCAATATACTCTT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRSIQIP*TWQYTL
Trigger: AAGAGTATATTGCCACGTTCAAGGGATCTGAATACT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACATCAGTCCGTTCCTTTaGAGAGTTTTAAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDISPFL*RVLKDR
Trigger: TCTGTCCTTTAAAACTCTTCAAAGGAACGGACTGAT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCTGATTTCCCTGTGTaGAGCATCAGTCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKADFPV*SISPFL
Trigger: AAGGAACGGACTGATGCTTCACACAGGGAAATCAGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGCTGATTTCCCTGTGTaGAGCATCAGTCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPADFPV*SISPFL
Trigger: AAGGAACGGACTGATGCTTCACACAGGGAAATCAGC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCTGATTTCCCTGTGTaGAGCATCAGTCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESADFPV*SISPFL
Trigger: AAGGAACGGACTGATGCTTCACACAGGGAAATCAGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGCTGATTTCCCTGTGTaGAGCATCAGTCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVADFPV*SISPFL
Trigger: AAGGAACGGACTGATGCTTCACACAGGGAAATCAGC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTATTGACATAATCAGCTaGTTTCCCTGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRIDIIS*FPCVKH
Trigger: ATGCTTCACACAGGGAAATCAGCTGATTATGTCAAT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCGTTGGAAATCCACGTaGTACCATTCTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPRWKST*YHSPSL
Trigger: CAATGATGGAGAATGGTATCACGTGGATTTCCAACG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGAGTGCGTAGTGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESECVVC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACACTACGCACTC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGAGTGCGTAGTGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVECVVC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACACTACGCACTC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAGTGCGTAGTGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKECVVC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACACTACGCACTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGAGTGCGTAGTGTGTTaGCAGAAATGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPECVVC*QKWYLT
Trigger: GGTCAGGTACCATTTCTGTCAACACACTACGCACTC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAACTCCAGCCTTGTATaGTCACCTGCCATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESNSSLV*SPAIWP
Trigger: AGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAACTCCAGCCTTGTATaGTCACCTGCCATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKNSSLV*SPAIWP
Trigger: AGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCAACTCCAGCCTTGTATaGTCACCTGCCATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPNSSLV*SPAIWP
Trigger: AGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTGCAGGTGCCCAATaGAATTGGAGGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKFAGAQ*NWRGQK
Trigger: CTTCTGTCCCCTCCAATTTCATTGGGCACCTGCAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTTGCAGGTGCCCAATaGAATTGGAGGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESFAGAQ*NWRGQK
Trigger: CTTCTGTCCCCTCCAATTTCATTGGGCACCTGCAAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTTGAGTGGTTTGTTTaGGCTCCCTTTGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVEWFV*APFDEV
Trigger: AACCTCATCAAAGGGAGCTCAAACAAACCACTCAAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCCACTGATTGTCGTTaGGTGGTTTGTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESATDCR*VVCLSS
Trigger: GGAGCTCAAACAAACCACTCAACGACAATCAGTGGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCACTGATTGTCGTTaGGTGGTTTGTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKATDCR*VVCLSS
Trigger: GGAGCTCAAACAAACCACTCAACGACAATCAGTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGCCACTGATTGTCGTTaGGTGGTTTGTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIATDCR*VVCLSS
Trigger: GGAGCTCAAACAAACCACTCAACGACAATCAGTGGC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCAC +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYIVVTQS*GTVHTH
Trigger: GTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTAC...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR TCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATTGCCACCACTCCTTGTaGAACGTACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNCHHSL*NVLHGI
Trigger: AATACCATGTAGTACGTTTCACAAGGAGTGGTGGCA...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTGAAGATTGTGAGCTaGCGCCCTTTGTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLKIVS*RPLSSS
Trigger: GCTACTCGACAAAGGGCGTCAGCTCACAATCTTCAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATATGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATCGCAAGGATGCTGGTaGCCTGTAGATTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFISQGCW*PVDCNR
Trigger: CCTATTGCAATCTACAGGTCACCAGCATCCTTGCGA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGCTTCACTCCAGCAGTaGTCTGAATTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIASLQQ*SEFPPS
Trigger: AGATGGCGGAAATTCAGAGCACTGCTGGAGTGAAGC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCTTCACTCCAGCAGTaGTCTGAATTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESASLQQ*SEFPPS
Trigger: AGATGGCGGAAATTCAGAGCACTGCTGGAGTGAAGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGCTTCACTCCAGCAGTaGTCTGAATTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPASLQQ*SEFPPS
Trigger: AGATGGCGGAAATTCAGAGCACTGCTGGAGTGAAGC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTAGCTCAAAACCGTTaGCTCTCTCTCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVAQNR*LSLTGP
Trigger: AGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATACCACACGCACTGTGTaGCATTCATTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNTTRTV*HSLSLR
Trigger: CCTCAATGATAATGAATGGCACACAGTGCGTGTGGT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCTTGTATGATCACCTaGCATTTGGCCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPCMIT*HLACHG
Trigger: GCCATGACAGGCCAAATGGCAGGTGATCATACAAGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCTTGTATGATCACCTaGCATTTGGCCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKPCMIT*HLACHG
Trigger: GCCATGACAGGCCAAATGGCAGGTGATCATACAAGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATTCTCAATTTGCCCATTaGAGAAGAGAGCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNSQFAH*RREHPR
Trigger: TCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGA...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTCTCAATTTGCCCATTaGAGAAGAGAGCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPSQFAH*RREHPR
Trigger: TCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGCCCATCATTAATGATTaGATTAGACTCTTCGATGGC +
Preference number: 4 (lower is better)
Translates to: QESASTLAESRIIGSFFVPIIND*IRLFDG
Trigger: GCCATCGAAGAGTCTAATGCAATCATTAATGATGGG...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: LLCFMNACGPHRLLERPSANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQVTGTL*RGHKDV
Trigger: GACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGAC...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR GCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTCAATCCCCACCACCATaGCAGTGGTACTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTQSPPP*QWYCWT
Trigger: AGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTG...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESTLLSS*LQSLPR
Trigger: CCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFITLLSS*LQSLPR
Trigger: CCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPTLLSS*LQSLPR
Trigger: CCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCAGGATGAGGCCATTTaGCTCCGTTGTACGGAAATC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESQDEAI*LRCTEI
Trigger: GATTTCCGTACAACGGAGCCAAATGGCCTCATCCTG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGGATGAGGCCATTTaGCTCCGTTGTACGGAAATC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKQDEAI*LRCTEI
Trigger: GATTTCCGTACAACGGAGCCAAATGGCCTCATCCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCCAGGATGAGGCCATTTaGCTCCGTTGTACGGAAATC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPQDEAI*LRCTEI
Trigger: GATTTCCGTACAACGGAGCCAAATGGCCTCATCCTG...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGTCTTGGCTTGCCATaGCTAAACAGGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCLGLP*LNRMRP
Trigger: TGGCCTCATCCTGTTTAGCCATGGCAAGCCAAGACA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATGTCTTGGCTTGCCATaGCTAAACAGGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKCLGLP*LNRMRP
Trigger: TGGCCTCATCCTGTTTAGCCATGGCAAGCCAAGACA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATAAGAGGAGGTACAAGTaGCCATCCAGCATCTCAATA +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNKRRYK*PSSISI
Trigger: TATTGAGATGCTGGATGGCCACTTGTACCTCCTCTT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCAGCCTTATTTTCTaGCAAGCCACCCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKASLIF*QATQVQ
Trigger: TTGTACCTGGGTGGCTTGCCAGAAAATAAGGCTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCCAGCCTTATTTTCTaGCAAGCCACCCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESASLIF*QATQVQ
Trigger: TTGTACCTGGGTGGCTTGCCAGAAAATAAGGCTGGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGCCAGCCTTATTTTCTaGCAAGCCACCCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPASLIF*QATQVQ
Trigger: TTGTACCTGGGTGGCTTGCCAGAAAATAAGGCTGGC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCGGATGTCTTTGCTCTaGCCATCAATAAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPRMSLL*PSINRS
Trigger: GGACCTATTTATTGATGGCCAGAGCAAAGACATCCG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAGGGTCATTGCAGAGTaGGCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIRVIAE*ATEGSH
Trigger: ATGACTTCCTTCAGTGGCCCACTCTGCAATGACCCT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCAGGGTCATTGCAGAGTaGGCCACTGAAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPRVIAE*ATEGSH
Trigger: ATGACTTCCTTCAGTGGCCCACTCTGCAATGACCCT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAATGTCATCTGTGGTCTaGCTGATGGGTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEMSSVV*LMGSFV
Trigger: CACAAAGGAACCCATCAGCCAGACCACAGATGACAT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATATGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTG +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVICQWYC*TPESPL
Trigger: CAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCA...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGGAAATGGTGGATGTaGTGCGCTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESWKWWM*CAPKLD
Trigger: ATCCAGTTTGGGAGCGCACCACATCCACCATTTCCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTGGAAATGGTGGATGTaGTGCGCTCCCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPWKWWM*CAPKLD
Trigger: ATCCAGTTTGGGAGCGCACCACATCCACCATTTCCA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000159778.8
ENSMUST00000174337.8
3UTR CAA 72 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTaGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTP*LYECVRSSPSF
Trigger: AAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFICFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTGCTTCAAAGGCCCCTaGTCCCAAATTAATGACCAG +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPCFKGP*SQINDQ
Trigger: CTGGTCATTAATTTGGGATCAGGGGCCTTTGAAGCA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFITDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
CDS-3UTR TCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGCCATTCATTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDAIHYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAATGAATGGC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATTGCTGGTGTCCCGTaGAATCATCACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKIAGVP*NHHIVP
Trigger: TGGCACAATGTGATGATTTCACGGGACACCAGCAAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATTGCTGGTGTCCCGTaGAATCATCACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESIAGVP*NHHIVP
Trigger: TGGCACAATGTGATGATTTCACGGGACACCAGCAAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTATACAAGTCACTCTTaGGGTCTAGATTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSYTSHS*GLDFWL
Trigger: GAGCCAGAAATCTAGACCTCAAGAGTGACTTGTATA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTATACAAGTCACTCTTaGGGTCTAGATTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPYTSHS*GLDFWL
Trigger: GAGCCAGAAATCTAGACCTCAAGAGTGACTTGTATA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIGGLHD*GGHLRL
Trigger: CAGTCTGAGATGTCCACCTCAATCATGGAGACCACC...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTTGGGTTGCTTCTCCTTaGCCACAGCCCCATTGGACT +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYIWVASP*PQPHWT
Trigger: AGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCA...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR GCA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: CFMNACGPHRLLERPSNIVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCATCTTAGGATCTCCTTaGTTGGCAAGTCGCGATAAT +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSILGSP*LASRDN
Trigger: ATTATCGCGACTTGCCAAGCAAGGAGATCCTAAGAT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATACATCAGGATACCATATaGACGCTGGGATCGGAACCG +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIHQDTI*TLGSEP
Trigger: CGGTTCCGATCCCAGCGTGCATATGGTATCCTGATG...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAATCGAAGGGTGTCTaGAGAGTCTCTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKQSKGV*RVSRSG
Trigger: ACCACTTCTAGAGACTCTGCAGACACCCTTCGATTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACAATCGAAGGGTGTCTaGAGAGTCTCTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIQSKGV*RVSRSG
Trigger: ACCACTTCTAGAGACTCTGCAGACACCCTTCGATTG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCAATCGAAGGGTGTCTaGAGAGTCTCTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVQSKGV*RVSRSG
Trigger: ACCACTTCTAGAGACTCTGCAGACACCCTTCGATTG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGCACAAGTCTATGTATaGCATTCCATTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDAQVYV*HSIKCQ
Trigger: CTGACATTTAATGGAATGGCATACATAGACTTGTGC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGTTATCATTGTTTCCTaGAGGGTAGCGTTCGATAAC +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNVIIVS*RVAFDN
Trigger: GTTATCGAACGCTACCCTGCAGGAAACAATGATAAC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGTTATCATTGTTTCCTaGAGGGTAGCGTTCGATAAC +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSVIIVS*RVAFDN
Trigger: GTTATCGAACGCTACCCTGCAGGAAACAATGATAAC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATATGGAAGGGCTGGCCCTaGTCTTTCCCGCCAATTATT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIWKGWP*SFPPII
Trigger: AATAATTGGCGGGAAAGAGCAGGGCCAGCCCTTCCA...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAATGTCATCTGTGGTCTaGGAGTTTTCACAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEMSSVV*EFSQCH
Trigger: ATGGCACTGTGAAAACTCGCAGACCACAGATGACAT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173917.8
ENSMUST00000197268.5
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATCAGACCCCAGCATaGTGTAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKHQTPA*CNLLAC
Trigger: ACACGCAAGAAGATTACACCATGCTGGGGTCTGATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACATCAGACCCCAGCATaGTGTAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIHQTPA*CNLLAC
Trigger: ACACGCAAGAAGATTACACCATGCTGGGGTCTGATG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATCATCTGTGGGTGCTTaGCATCCTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFISSVGA*HPSDVL
Trigger: CAAGACATCAGAAGGATGCCAAGCACCCACAGATGA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTCATCTGTGGGTGCTTaGCATCCTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSSVGA*HPSDVL
Trigger: CAAGACATCAGAAGGATGCCAAGCACCCACAGATGA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTCATCTGTGGGTGCTTaGCATCCTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVSSVGA*HPSDVL
Trigger: CAAGACATCAGAAGGATGCCAAGCACCCACAGATGA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGGATGTCTTTGCTCTaGCCATCAATAAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLERMSLL*PSINRS
Trigger: GGACCTATTTATTGATGGCCAGAGCAAAGACATCCG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTATACCATATGCACGCTaGGATCGGAACCGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTIPYAR*DRNRKD
Trigger: GTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTAT...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGGCATGGACCAGTTTTaGCAGGGATTTATATGTTTC +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNGMDQF*QGFICF
Trigger: GAAACATATAAATCCCTGCCAAAACTGGTCCATGCC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGGCATGGACCAGTTTTaGCAGGGATTTATATGTTTC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPGMDQF*QGFICF
Trigger: GAAACATATAAATCCCTGCCAAAACTGGTCCATGCC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTGAACATGAATCCTCTTaGCAGGTTGTGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTEHESS*QVVLGP
Trigger: AGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTC...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESNTASF*TVLNPM
Trigger: CATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFINTASF*TVLNPM
Trigger: CATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTCACATTCCCCACTATaGCGATGTTGGCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSHSPL*RCWHRS
Trigger: AGAACGATGCCAACATCGCCATAGTGGGGAATGTGA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATCACATTCCCCACTATaGCGATGTTGGCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFISHSPL*RCWHRS
Trigger: AGAACGATGCCAACATCGCCATAGTGGGGAATGTGA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTCACATTCCCCACTATaGCGATGTTGGCATCGTTCT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPSHSPL*RCWHRS
Trigger: AGAACGATGCCAACATCGCCATAGTGGGGAATGTGA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATGTCATCTGTGGTCTaGCTGATGGGTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIMSSVV*LMGSFV
Trigger: CACAAAGGAACCCATCAGCCAGACCACAGATGACAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATGTCATCTGTGGTCTaGCTGATGGGTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESMSSVV*LMGSFV
Trigger: CACAAAGGAACCCATCAGCCAGACCACAGATGACAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATATTGACATAATCAGCTaGTTTCCCTGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNIDIIS*FPCVKH
Trigger: ATGCTTCACACAGGGAAATCAGCTGATTATGTCAAT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAGAATTCCATCCACTaGTATTGTCACCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKKNSIH*YCHLTQ
Trigger: CTGCGTCAGGTGACAATATCAGTGGATGGAATTCTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAAGCCACCACACCGTaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKKATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATTCACGGTGTGGTGGCTTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAGCCACCACACCGTaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIKATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATTCACGGTGTGGTGGCTTT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGAAAGCCACCACACCGTaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVKATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATTCACGGTGTGGTGGCTTT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTTGCTTGGCATCCTTCTaGTGTCTTGGCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYICLASF*CLGLPW
Trigger: CCATGGCAAGCCAAGACATCAGAAGGATGCCAAGCA...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACGTTGGAAATCCACGTaGTACCATTCTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRWKST*YHSPSL
Trigger: CAATGATGGAGAATGGTATCACGTGGATTTCCAACG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGTTGGAAATCCACGTaGTACCATTCTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRWKST*YHSPSL
Trigger: CAATGATGGAGAATGGTATCACGTGGATTTCCAACG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTTGAGTGGTTTGTTTaGGCTCCCTTTGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVEWFV*APFDEV
Trigger: AACCTCATCAAAGGGAGCTCAAACAAACCACTCAAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTTGAGTGGTTTGTTTaGGCTCCCTTTGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVEWFV*APFDEV
Trigger: AACCTCATCAAAGGGAGCTCAAACAAACCACTCAAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGTTGAGTGGTTTGTTTaGGCTCCCTTTGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVVEWFV*APFDEV
Trigger: AACCTCATCAAAGGGAGCTCAAACAAACCACTCAAC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGCCACCACTCCTTGTaGAACGTACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCHHSL*NVLHGI
Trigger: AATACCATGTAGTACGTTTCACAAGGAGTGGTGGCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATGCCACCACTCCTTGTaGAACGTACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFICHHSL*NVLHGI
Trigger: AATACCATGTAGTACGTTTCACAAGGAGTGGTGGCA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAGCTTCACTCCAGCAGTaGTCTGAATTTCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIASLQQ*SEFPPS
Trigger: AGATGGCGGAAATTCAGAGCACTGCTGGAGTGAAGC...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAAGCCATCTCTGCACATaGCATTGTTTTTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLESHLCT*HCFCKD
Trigger: ATCCTTGCAAAAACAATGGCATGTGCAGAGATGGCT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACCACACGCACTGTGTaGCATTCATTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESTTRTV*HSLSLR
Trigger: CCTCAATGATAATGAATGGCACACAGTGCGTGTGGT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGACCACACGCACTGTGTaGCATTCATTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVTTRTV*HSLSLR
Trigger: CCTCAATGATAATGAATGGCACACAGTGCGTGTGGT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAACCACACGCACTGTGTaGCATTCATTATCATTGAGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFITTRTV*HSLSLR
Trigger: CCTCAATGATAATGAATGGCACACAGTGCGTGTGGT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTACTGTGTGGAGATTaGTGGTGTCCCGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLLCGD*WCPVKS
Trigger: TGATTTCACGGGACACCAGCAATCTCCACACAGTAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTACTGTGTGGAGATTaGTGGTGTCCCGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLLCGD*WCPVKS
Trigger: TGATTTCACGGGACACCAGCAATCTCCACACAGTAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATCTCAATTTGCCCATTaGAGAAGAGAGCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFISQFAH*RREHPR
Trigger: TCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTCTCAATTTGCCCATTaGAGAAGAGAGCATCCGAGA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSQFAH*RREHPR
Trigger: TCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACATCCTCTCTCAATTTaGCCATTGCAGAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIHPLSI*PLQKRA
Trigger: TGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATCCTCTCTCAATTTaGCCATTGCAGAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKHPLSI*PLQKRA
Trigger: TGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPLLLP*SPIIRC
Trigger: ACACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTTGTCTTGGCTTGCCATaGCTAAACAGGATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTCLGLP*LNRMRP
Trigger: TGGCCTCATCCTGTTTAGCCATGGCAAGCCAAGACA...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATCCTTCTGATGTCTTaGCTTGCCATGGCTAAACAG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESILLMS*LAMAKQ
Trigger: CTGTTTAGCCATGGCAAGCCAAGACATCAGAAGGAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCCTTCTGATGTCTTaGCTTGCCATGGCTAAACAG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKILLMS*LAMAKQ
Trigger: CTGTTTAGCCATGGCAAGCCAAGACATCAGAAGGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAAGAGGAGGTACAAGTaGCCATCCAGCATCTCAATA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKKRRYK*PSSISI
Trigger: TATTGAGATGCTGGATGGCCACTTGTACCTCCTCTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAAGAGGAGGTACAAGTaGCCATCCAGCATCTCAATA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESKRRYK*PSSISI
Trigger: TATTGAGATGCTGGATGGCCACTTGTACCTCCTCTT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCAAGAGGAGGTACAAGTaGCCATCCAGCATCTCAATA +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPKRRYK*PSSISI
Trigger: TATTGAGATGCTGGATGGCCACTTGTACCTCCTCTT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACGGATGTCTTTGCTCTaGCCATCAATAAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIRMSLL*PSINRS
Trigger: GGACCTATTTATTGATGGCCAGAGCAAAGACATCCG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCGGATGTCTTTGCTCTaGCCATCAATAAATAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRMSLL*PSINRS
Trigger: GGACCTATTTATTGATGGCCAGAGCAAAGACATCCG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATCACCACCGGAAGCTaGATTTTCATGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIITTGS*IFMNML
Trigger: GAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATCACCACCGGAAGCTaGATTTTCATGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESITTGS*IFMNML
Trigger: GAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGGCATGGACCAGTTTTaGCAGGGATTTATATGTTTC +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEGMDQF*QGFICF
Trigger: GAAACATATAAATCCCTGCCAAAACTGGTCCATGCC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACTCCAATTTTTCCTTaGTGTATGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESTPIFP*CMCSSR
Trigger: CCTGGAGCTGCACATACACCAAGGAAAAATTGGAGT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAACTCCAATTTTTCCTTaGTGTATGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFITPIFP*CMCSSR
Trigger: CCTGGAGCTGCACATACACCAAGGAAAAATTGGAGT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGTGAAACGTACTACATaGTATTTCCCATCATTAATG +
Preference number: 4 (lower is better)
Translates to: LCLDVILLCFMNACGPHRVKRTT*YFPSLM
Trigger: CATTAATGATGGGAAATACCATGTAGTACGTTTCAC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGTGTCCACCTGTAACGTaGCATTGCCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQCPPVT*HCHHSL
Trigger: CAAGGAGTGGTGGCAATGCCACGTTACAGGTGGACA...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CCA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATACTCTTCTTTTCCTTaGTCGCCCATCATCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKYSSFP*SPIIRC
Trigger: ACACCTGATGATGGGCGACCAAGGAAAAGAAGAGTA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000160800.9
CDS-3UTR CCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCAAGGATGTCATCTGTaGTCTGCGAGTTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVQGCHL*SASFHS
Trigger: ACTGTGAAAACTCGCAGACCACAGATGACATCCTTG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173917.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAATTGACATAATCAGCTaGTTTCCCTGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEIDIIS*FPCVKH
Trigger: ATGCTTCACACAGGGAAATCAGCTGATTATGTCAAT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTACTGATATTGTCACCTaGCGCAGATTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTTDIVT*RRFLVT
Trigger: AGTCACCAGGAATCTGCGTCAGGTGACAATATCAGT...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072671.14
CDS-3UTR TCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTATCCAAACCTGGCATTaGGTTCACAGTAATCTATAT +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPIQTWH*VHSNLY
Trigger: ATATAGATTACTGTGAACTCAATGCCAGGTTTGGAT...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAATTGCTGGTGTCCCGTaGAATCATCACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIIAGVP*NHHIVP
Trigger: TGGCACAATGTGATGATTTCACGGGACACCAGCAAT...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATATACAAGTCACTCTTaGGGTCTAGATTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKYTSHS*GLDFWL
Trigger: GAGCCAGAAATCTAGACCTCAAGAGTGACTTGTATA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTTTGTGGTGGTCTCCATaGTTGAGGTGGACATCTCAG +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYILWWSP*LRWTSQ
Trigger: CTGAGATGTCCACCTCAATCATGGAGACCACCACAA...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFITVLSY*CSFDSH
Trigger: ATGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCAT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKTVLSY*CSFDSH
Trigger: ATGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCAT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESTVLSY*CSFDSH
Trigger: ATGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGACTGTGCTGAGTTACTaGTGTAGTTTCGACTCTCAT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVTVLSY*CSFDSH
Trigger: ATGAGAGTCGAAACTACATCAGTAACTCAGCACAGT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATCTTAGGATCTCCTTaGTTGGCAAGTCGCGATAAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIILGSP*LASRDN
Trigger: ATTATCGCGACTTGCCAAGCAAGGAGATCCTAAGAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCATCTTAGGATCTCCTTaGTTGGCAAGTCGCGATAAT +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPILGSP*LASRDN
Trigger: ATTATCGCGACTTGCCAAGCAAGGAGATCCTAAGAT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGATCTTAGGATCTCCTTaGTTGGCAAGTCGCGATAAT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVILGSP*LASRDN
Trigger: ATTATCGCGACTTGCCAAGCAAGGAGATCCTAAGAT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAGCCATCTCTGCACATaGCATTGTTTTTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSHLCT*HCFCKD
Trigger: ATCCTTGCAAAAACAATGGCATGTGCAGAGATGGCT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAGCCATCTCTGCACATaGCATTGTTTTTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFISHLCT*HCFCKD
Trigger: ATCCTTGCAAAAACAATGGCATGTGCAGAGATGGCT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCCTTGTATGATCACCTaGCATTTGGCCTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYIPCMIT*HLACHG
Trigger: GCCATGACAGGCCAAATGGCAGGTGATCATACAAGG...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGCACAAGTCTATGTATaGCATTCCATTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNAQVYV*HSIKCQ
Trigger: CTGACATTTAATGGAATGGCATACATAGACTTGTGC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTTATCATTGTTTCCTaGAGGGTAGCGTTCGATAAC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVIIVS*RVAFDN
Trigger: GTTATCGAACGCTACCCTGCAGGAAACAATGATAAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTATCATTGTTTCCTaGAGGGTAGCGTTCGATAAC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVIIVS*RVAFDN
Trigger: GTTATCGAACGCTACCCTGCAGGAAACAATGATAAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGIVLC*HIQNFQ
Trigger: TTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTACATTGTTGTCTTCTTaGCTGCAGTCCTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYITLLSS*LQSLPR
Trigger: CCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGT...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATACATCAGACCCCAGCATaGTGTAATCTTCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIHQTPA*CNLLAC
Trigger: ACACGCAAGAAGATTACACCATGCTGGGGTCTGATG...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATATCATCTGTGGGTGCTTaGCATCCTTCTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVISSVGA*HPSDVL
Trigger: CAAGACATCAGAAGGATGCCAAGCACCCACAGATGA...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGCATGGACCAGTTTTaGCAGGGATTTATATGTTTC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGMDQF*QGFICF
Trigger: GAAACATATAAATCCCTGCCAAAACTGGTCCATGCC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGCATGGACCAGTTTTaGCAGGGATTTATATGTTTC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESGMDQF*QGFICF
Trigger: GAAACATATAAATCCCTGCCAAAACTGGTCCATGCC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGTATTCAGATCCCTTaGACGTGGCAATATACTCTT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKSIQIP*TWQYTL
Trigger: AAGAGTATATTGCCACGTTCAAGGGATCTGAATACT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATCAGTCCGTTCCTTTaGAGAGTTTTAAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESISPFL*RVLKDR
Trigger: TCTGTCCTTTAAAACTCTTCAAAGGAACGGACTGAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCATCAGTCCGTTCCTTTaGAGAGTTTTAAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPISPFL*RVLKDR
Trigger: TCTGTCCTTTAAAACTCTTCAAAGGAACGGACTGAT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATCAGTCCGTTCCTTTaGAGAGTTTTAAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIISPFL*RVLKDR
Trigger: TCTGTCCTTTAAAACTCTTCAAAGGAACGGACTGAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATTGACATAATCAGCTaGTTTCCCTGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESIDIIS*FPCVKH
Trigger: ATGCTTCACACAGGGAAATCAGCTGATTATGTCAAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATTGACATAATCAGCTaGTTTCCCTGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKIDIIS*FPCVKH
Trigger: ATGCTTCACACAGGGAAATCAGCTGATTATGTCAAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATTGACATAATCAGCTaGTTTCCCTGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIIDIIS*FPCVKH
Trigger: ATGCTTCACACAGGGAAATCAGCTGATTATGTCAAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTCGTTGGAAATCCACGTaGTACCATTCTCCATCATTG +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTRWKST*YHSPSL
Trigger: CAATGATGGAGAATGGTATCACGTGGATTTCCAACG...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGCCATTCATTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEAIHYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAATGAATGGC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAGTTGAGTGGTTTGTTTaGGCTCCCTTTGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIVEWFV*APFDEV
Trigger: AACCTCATCAAAGGGAGCTCAAACAAACCACTCAAC...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGAAGAATTCCATCCACTaGTATTGTCACCGAACAATG +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVKNSIH*YCHRTM
Trigger: CATTGTTCGGTGACAATATCAGTGGATGGAATTCTT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000161402.10
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCTATATCACCATTTTTaGACAAGTCTATGTATGCCA +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNLYHHF*TSLCMP
Trigger: TGGCATACATAGACTTGTGCAAAAATGGTGATATAG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCTATATCACCATTTTTaGACAAGTCTATGTATGCCA +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPLYHHF*TSLCMP
Trigger: TGGCATACATAGACTTGTGCAAAAATGGTGATATAG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTTTACTGTGTGGAGATTaGTGGTGTCCCGTGAAATCA +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTLLCGD*WCPVKS
Trigger: TGATTTCACGGGACACCAGCAATCTCCACACAGTAA...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCCATCATTAATGATTaGATTAGACTCTTCGATGGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPIIND*IRLFDG
Trigger: GCCATCGAAGAGTCTAATGCAATCATTAATGATGGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCCATCATTAATGATTaGATTAGACTCTTCGATGGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKPIIND*IRLFDG
Trigger: GCCATCGAAGAGTCTAATGCAATCATTAATGATGGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCCCATCATTAATGATTaGATTAGACTCTTCGATGGC +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVPIIND*IRLFDG
Trigger: GCCATCGAAGAGTCTAATGCAATCATTAATGATGGG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCCCCATCATTAATGATTaGATTAGACTCTTCGATGGC +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPPIIND*IRLFDG
Trigger: GCCATCGAAGAGTCTAATGCAATCATTAATGATGGG...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATACCTTTACTTTTACCTTaGTCGCCCATCATCAGGTGT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIPLLLP*SPIIRC
Trigger: ACACCTGATGATGGGCGACCAAGGTAAAAGTAAAGG...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAAAGAGGAGGTACAAGTaGCCATCCAGCATCTCAATA +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIKRRYK*PSSISI
Trigger: TATTGAGATGCTGGATGGCCACTTGTACCTCCTCTT...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAACTCCAATTTTTCCTTaGTGTATGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVITPIFP*CMCSSR
Trigger: CCTGGAGCTGCACATACACCAAGGAAAAATTGGAGT...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CCA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGTGAAACGTACTACATaGTATTTCCCATCATTAATG +
Preference number: 4 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSVKRTT*YFPSLM
Trigger: CATTAATGATGGGAAATACCATGTAGTACGTTTCAC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGTGAAACGTACTACATaGTATTTCCCATCATTAATG +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPVKRTT*YFPSLM
Trigger: CATTAATGATGGGAAATACCATGTAGTACGTTTCAC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FVLCLDVILLCFMNACGPIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGATGTCATCTGTGGTCTaGCTGATGGGTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQMSSVV*LMGSFV
Trigger: CACAAAGGAACCCATCAGCCAGACCACAGATGACAT...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR TCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGAAAGCCACCACACCGTaGATCTTCATCTTAGGATCT +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQKATTP*IFILGS
Trigger: AGATCCTAAGATGAAGATTCACGGTGTGGTGGCTTT...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCATTCATTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKAIHYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAATGAATGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCCATTCATTATCATTaGGGTTATAGCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESAIHYH*GYSQQK
Trigger: TTTTTGCTGGCTATAACCTCAATGATAATGAATGGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATCCAAACCTGGCATTaGGTTCACAGTAATCTATAT +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIIQTWH*VHSNLY
Trigger: ATATAGATTACTGTGAACTCAATGCCAGGTTTGGAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCCAAACCTGGCATTaGGTTCACAGTAATCTATAT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKIQTWH*VHSNLY
Trigger: ATATAGATTACTGTGAACTCAATGCCAGGTTTGGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGATCCAAACCTGGCATTaGGTTCACAGTAATCTATAT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVIQTWH*VHSNLY
Trigger: ATATAGATTACTGTGAACTCAATGCCAGGTTTGGAT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR TCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTTGCCACCACTCCTTGTaGAACGTACTACATGGTATT +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYICHHSL*NVLHGI
Trigger: AATACCATGTAGTACGTTTCACAAGGAGTGGTGGCA...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGACTTTCACATCATaGCAGGCATTATCATTAAAC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVTFTS*QALSLN
Trigger: GTTTAATGATAATGCCTGGCATGATGTGAAAGTCAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAAGCCATCTCTGCACATaGCATTGTTTTTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVISHLCT*HCFCKD
Trigger: ATCCTTGCAAAAACAATGGCATGTGCAGAGATGGCT...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCACAAGTCTATGTATaGCATTCCATTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESAQVYV*HSIKCQ
Trigger: CTGACATTTAATGGAATGGCATACATAGACTTGTGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGCACAAGTCTATGTATaGCATTCCATTAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIAQVYV*HSIKCQ
Trigger: CTGACATTTAATGGAATGGCATACATAGACTTGTGC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTGTTATCATTGTTTCCTaGAGGGTAGCGTTCGATAAC +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTVIIVS*RVAFDN
Trigger: GTTATCGAACGCTACCCTGCAGGAAACAATGATAAC...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CCA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTATCACCACCGGAAGCTaGATTTTCATGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: VCLGIRSPFKCILLHCYIITTGS*IFMNML
Trigger: GAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGAT...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CCA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGATCACCACCGGAAGCTaGATTTTCATGAACATGCTC +
Preference number: 4 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQITTGS*IFMNML
Trigger: GAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGAT...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CCA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: DVILLCFMNACGPHRLLEIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTAGTATTCAGATCCCTTaGACGTGGCAATATACTCTT +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTSIQIP*TWQYTL
Trigger: AAGAGTATATTGCCACGTTCAAGGGATCTGAATACT...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTATATCACCATTTTTaGACAAGTCTATGTATGCCA +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLYHHF*TSLCMP
Trigger: TGGCATACATAGACTTGTGCAAAAATGGTGATATAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTATATCACCATTTTTaGACAAGTCTATGTATGCCA +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLYHHF*TSLCMP
Trigger: TGGCATACATAGACTTGTGCAAAAATGGTGATATAG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR GCA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVANYYG*LAIEDC
Trigger: ACAATCTTCAATAGCCAAGCAACCATAATAATTGGC...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTGAAACGTACTACATaGTATTTCCCATCATTAATG +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVKRTT*YFPSLM
Trigger: CATTAATGATGGGAAATACCATGTAGTACGTTTCAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGAAACGTACTACATaGTATTTCCCATCATTAATG +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVKRTT*YFPSLM
Trigger: CATTAATGATGGGAAATACCATGTAGTACGTTTCAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTGAAACGTACTACATaGTATTTCCCATCATTAATG +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVKRTT*YFPSLM
Trigger: CATTAATGATGGGAAATACCATGTAGTACGTTTCAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGTGAAACGTACTACATaGTATTTCCCATCATTAATG +
Preference number: 4 (lower is better)
Translates to: KTSRVNENTADVREFYWPVKRTT*YFPSLM
Trigger: CATTAATGATGGGAAATACCATGTAGTACGTTTCAC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CCA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATTATTATGGTTGCTTaGCTATTGAAGATTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKIIMVA*LLKIVS
Trigger: GCTCACAATCTTCAATAGCCAAGCAACCATAATAAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR TCA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTATCCAAACCTGGCATTaGGTTCACAGTAATCTATAT +
Preference number: 4 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTIQTWH*VHSNLY
Trigger: ATATAGATTACTGTGAACTCAATGCCAGGTTTGGAT...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR GCA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATACTATATCACCATTTTTaGACAAGTCTATGTATGCCA +
Preference number: 4 (lower is better)
Translates to: FKVSWNQNLNEANHRFVILYHHF*TSLCMP
Trigger: TGGCATACATAGACTTGTGCAAAAATGGTGATATAG...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
3UTR CAA 72 bp TTCTTTGTGTGTGTTGTGTTTTGTGTTGGTTTTGTGTaGTGCCTCGATGTAATACTCCTTTGCTTTATGAAT +
Preference number: 4 (lower is better)
Translates to: FFVCVVFCVGFV*CLDVILLCFMN
Trigger: ATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACACAAAACACAACACACACAAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS GCA 90 bp GGAAGCGCGTCCACTGGCCCTCGGCGCCCGGGAACTCCAGCCCGCTaGCCAGCTCTGCCCAGCAGCCCAGCAGCAGCAGCGACAGGCAGA +
Preference number: 5 (lower is better)
Translates to: GSASTGPRRPGTPAR*PALPSSPAAAATGR
Trigger: TCTGCCTGTCGCTGCTGCTGCTGGGCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp CCACTGGCCCTCGGCGCCCGGGAACTCCAGCCCGCTGCCCAGCTCTaGCCAGCAGCCCAGCAGCAGCAGCGACAGGCAGAGGAGACAGCA +
Preference number: 5 (lower is better)
Translates to: PLALGARELQPAAQL*PAAQQQQRQAEETA
Trigger: TGCTGTCTCCTCTGCCTGTCGCTGCTGCTGCTGGGCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCCCGGGCGCCGAGGGCCAGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 90 bp AGTCGCATACGGCCTGGTCGTCGACCACGGAGCACACGCCCCCGTTaGGGCACACGCCGCCCTCGCCTTCTTCGCCCGCCTCGCATGGGC +
Preference number: 5 (lower is better)
Translates to: SRIRPGRRPRSTRPR*GTRRPRLLRPPRMG
Trigger: GCCCATGCGAGGCGGGCGAAGAAGGCGAGGGCGGCGTGTGCCTCAACGGGGGCGTGTGCTCCGTGGTCGACGACCAGGCCGTATGCGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 90 bp CCCGTTGAGGCACACGCCGCCCTCGCCTTCTTCGCCCGCCTCGCATaGGCTCCCGCCACCGCTGTTGGGAGGCTCGTCGTCCAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: PVEAHAALAFFARLA*APATAVGRLVVQLD
Trigger: GTCAAGCTGGACGACGAGCCTCCCAACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAAGAAGGCGAGGGCGGCGTGTGCCTCAACGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp CCTCCACCCACTTGGCCTCGGCGCGGTCGATGTAGAGCGTGGTGTTaGGGAACTGGCGGCGGATGCGCACGCTGTGCCAGGCGCCGTCGT +
Preference number: 5 (lower is better)
Translates to: PPPTWPRRGRCRAWC*GTGGGCARCARRRR
Trigger: ACGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTACATCGACCGCGCCGAGGCCAAGTGGGTGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 90 bp CAGTCCTTGCCACGGAAGCCGGTCCTCGAGCAGTCGCATACGGCCTaGTCGTCGACCACGGAGCACACGCCCCCGTTGAGGCACACGCCG +
Preference number: 5 (lower is better)
Translates to: QSLPRKPVLEQSHTA*SSTTEHTPPLRHTP
Trigger: CGGCGTGTGCCTCAACGGGGGCGTGTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTGCTCGAGGACCGGCTTCCGTGGCAAGGACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 90 bp CTCGTCGTCCAGCTTGACCTCGCCGCCGTCCACCGGCAGGGCCTGTaGCGAGTTGACCCGGACGTCACGGATCCAGCCCTTGAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LVVQLDLAAVHRQGL*RVDPDVTDPALEGL
Trigger: GAGCCCTTCAAGGGCTGGATCCGTGACGTCCGGGTCAACTCGTCACAGGCCCTGCCGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 90 bp TCTTCAGCTGGAAGCTCATCTCGCTCTCGCAGCACGCGTTCCACTTaGGGAAGCGCGTCCACTGGCCCTCGGCGCCCGGGAACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSAGSSSRSRSTRST*GSASTGPRRPGTPA
Trigger: GGCTGGAGTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTGCGAGAGCGAGATGAGCTTCCAGCTGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp CGCAGAAGCCCTCGTCGTCGAAGTAGAGCACGAGGCCGCGGGCACTaGGCGTCTTCAGCTGGAAGCTCATCTCGCTCTCGCAGCACGCGT +
Preference number: 5 (lower is better)
Translates to: RRSPRRRSRARGRGH*ASSAGSSSRSRSTR
Trigger: ACGCGTGCTGCGAGAGCGAGATGAGCTTCCAGCTGAAGACGCGCAGTGCCCGCGGCCTCGTGCTCTACTTCGACGACGAGGGCTTCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 90 bp GAGCGGCTGCTGCGACAATCCCCACCACCATGCCAGTGGTACTGCTaGACTCCCGAATCACCTCTGCAGAGCCTGGGTATGGTTCACGGC +
Preference number: 5 (lower is better)
Translates to: ERLLRQSPPPCQWYC*TPESPLQSLGMVHG
Trigger: GCCGTGAACCATACCCAGGCTCTGCAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTGTCGCAGCAGCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS CCA 90 bp CTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTTaGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTGG +
Preference number: 5 (lower is better)
Translates to: LQSLGMVHGHLLWWG*LSSAHRGQCPHRHW
Trigger: CCAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS TCA 90 bp AGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTTGGCTaGGCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: RAWVWFTATYSGGVG*ARLTGVNVLIVTGT
Trigger: TGTCCCAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS GCA 90 bp GGTGTGCCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTaGCACGGAAGCCGGTCCTCGAGCAGTCGCATACGGCCTGGTCGT +
Preference number: 5 (lower is better)
Translates to: GVPDLPHCCLLGCSP*HGSRSSSSRIRPGR
Trigger: ACGACCAGGCCGTATGCGACTGCTCGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp ACAGAGCGGCTGCTGCGACAATCCCCACCACCATGCCAGTGGTACTaGTGGACTCCCGAATCACCTCTGCAGAGCCTGGGTATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: TERLLRQSPPPCQWY*WTPESPLQSLGMVH
Trigger: GTGAACCATACCCAGGCTCTGCAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTGTCGCAGCAGCCGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS CCA 90 bp GGTTGGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCACAAGGATGTCATCTGTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: GWLSSAHRGQCPHRH*DTLPRPQGCHLWSG
Trigger: GCCAGACCACAGATGACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
CDS CCA 90 bp TCACCTCTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTaGGGTTGGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCATCGT +
Preference number: 5 (lower is better)
Translates to: SPLQSLGMVHGHLLW*GWLSSAHRGQCPHR
Trigger: ACGATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS CCA 90 bp CTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTTaGCTAACCCACCTGAGCTCGGCTCACAGGGGTCAATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LQSLGMVHGHLLWWG*LTHLSSAHRGQCPH
Trigger: ATGAGGACATTGACCCCTGTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS CCA 90 bp TCACCTCTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTaGGGTTGGCTAACCCACCTGAGCTCGGCTCACAGGGGTCAATGT +
Preference number: 5 (lower is better)
Translates to: SPLQSLGMVHGHLLW*GWLTHLSSAHRGQC
Trigger: ACATTGACCCCTGTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS CCA 90 bp GAATCACCTCTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTaGTGGGGTTGGCTAACCCACCTGAGCTCGGCTCACAGGGGTCAA +
Preference number: 5 (lower is better)
Translates to: ESPLQSLGMVHGHLL*WGWLTHLSSAHRGQ
Trigger: TTGACCCCTGTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAGAGGTGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS CCA 90 bp GGTTGGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCACAAGGATGTCATCTGTGGTCTGCG +
Preference number: 5 (lower is better)
Translates to: GWLSSAHRGQCPHRH*DTLPRPQGCHLWSA
Trigger: CGCAGACCACAGATGACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197268.5
CDS GCA 90 bp GCACGCTGGGATCGGAACCGCAAGGACACGTCCTCAGCCTCAGTGTaGATCACCACCGGAAGCTGGATTTTCATGAACATGCTCCCGTCG +
Preference number: 5 (lower is better)
Translates to: ARWDRNRKDTSSASV*ITTGSWIFMNMLPS
Trigger: CGACGGGAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGATGCACACTGAGGCTGAGGACGTGTCCTTGCGGTTCCGATCCCAGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp GCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTCATCTGTGGTCTGGCTGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: ARLTGVNVLIVTGTL*RGHKDVICGLADGF
Trigger: GAACCCATCAGCCAGACCACAGATGACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS CCA 90 bp GAATCACCTCTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTaGTGGGGTTGGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: ESPLQSLGMVHGHLL*WGWLSSAHRGQCPH
Trigger: ATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAGAGGTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCAGCACGCGTTCCACTaGGGGAAGCGCGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: LAPQESASTLAESRIIGSQHAFH*GKRVHW
Trigger: CCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACGAGGCCAGCGTGAGCTaGAGGGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDEASVS*RAAARS
Trigger: ACTGCGCGCCGCGGCCCTCAAGCTCACGCTGGCCTC...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGAGGCCAGCGTGAGCTaGAGGGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHREASVS*RAAARS
Trigger: ACTGCGCGCCGCGGCCCTCAAGCTCACGCTGGCCTC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp CCATCATCAGGTGTGCCAGACCTTCCACATTGTTGTCTTCTTGGCTaGAGTCCTTGCCACGGAAGCCGGTCCTCGAGCAGTCGCATACGG +
Preference number: 5 (lower is better)
Translates to: PSSGVPDLPHCCLLG*SPCHGSRSSSSRIR
Trigger: CCGTATGCGACTGCTCGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACCTGATGATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 90 bp CCCAGTCCTGAGGAACTGTCCACACGCACCAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATGGCCAGCCTGTCTGCTCGTGTACTG +
Preference number: 5 (lower is better)
Translates to: PSPEELSTRTNTASF*TVLNPMASLSARVL
Trigger: CAGTACACGAGCAGACAGGCTGGCCATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTTGGTGCGTGTGGACAGTTCCTCAGGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000196559.5
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTTGACCTCCACCCACTaGGCCTCGGCGCGGTCGATG +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSLTSTH*ASARSM
Trigger: CATCGACCGCGCCGAGGCCAAGTGGGTGGAGGTCAA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp GGTGTCTGCAGAGTCTCTAGAAGTGGTCGCCATCAGGATACCATATaGACGCTGGGATCGGAACCGCAAGGACACGTCCTCAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: GVCRVSRSGRHQDTI*TLGSEPQGHVLSLS
Trigger: ACTGAGGCTGAGGACGTGTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTATCCTGATGGCGACCACTTCTAGAGACTCTGCAGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 90 bp GCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTCATCTGTGGTCTGCGAGTTTTCACA +
Preference number: 5 (lower is better)
Translates to: ARLTGVNVLIVTGTL*RGHKDVICGLRVFT
Trigger: TGTGAAAACTCGCAGACCACAGATGACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173917.8
ENSMUST00000197268.5
CDS CCA 90 bp GCAGAGTCTCTAGAAGTGGTCGCCATCAGGATACCATATGCACGCTaGGATCGGAACCGCAAGGACACGTCCTCAGCCTCAGTGTGCATC +
Preference number: 5 (lower is better)
Translates to: AESLEVVAIRIPYAR*DRNRKDTSSASVCI
Trigger: GATGCACACTGAGGCTGAGGACGTGTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTATCCTGATGGCGACCACTTCTAGAGACTCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGAGGCCAGCGTGAGCTaGAGGGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSEASVS*RAAARS
Trigger: ACTGCGCGCCGCGGCCCTCAAGCTCACGCTGGCCTC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATTGACCTCCACCCACTaGGCCTCGGCGCGGTCGATG +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNILTSTH*ASARSM
Trigger: CATCGACCGCGCCGAGGCCAAGTGGGTGGAGGTCAA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 90 bp GGATCTCACTCTCACCGGGAGCTGTGTAGGGAGTGCGTAGTGTGTTaGCAGAAATGGTACCTGACCGTCCATCCCGTTGGAAATCCACGT +
Preference number: 5 (lower is better)
Translates to: GSHSHRELCRECVVC*QKWYLTVHPVGNPR
Trigger: ACGTGGATTTCCAACGGGATGGACGGTCAGGTACCATTTCTGTCAACACACTACGCACTCCCTACACAGCTCCCGGTGAGAGTGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 90 bp CGTCCTCAGCCTCAGTGTGCATCACCACCGGAAGCTGGATTTTCATaGACATGCTCCCGTCGTAGCTCAAAACCGTTGCCTCTCTCTCAC +
Preference number: 5 (lower is better)
Translates to: RPQPQCASPPEAGFS*TCSRRSSKPLPLSH
Trigger: GTGAGAGAGAGGCAACGGTTTTGAGCTACGACGGGAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGATGCACACTGAGGCTGAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 90 bp TCTTCTAGCTGTGCTGGTAGCCAGGGTTGTGGTGGTCTCCATGATTaGGGTGGACATCTCAGACTGCATGGCAGTGGCTGTCGACTCAGT +
Preference number: 5 (lower is better)
Translates to: SSSCAGSQGCGGLHD*GGHLRLHGSGCRLS
Trigger: ACTGAGTCGACAGCCACTGCCATGCAGTCTGAGATGTCCACCTCAATCATGGAGACCACCACAACCCTGGCTACCAGCACAGCTAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS GCA 90 bp CACGGCTTCCTTCTGGACAGTGCTAAATCCGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTCATTGGGAGGCCACTTATATGTAAT +
Preference number: 5 (lower is better)
Translates to: HGFLLDSAKSDGQPV*SCTGAVIGRPLICN
Trigger: ATTACATATAAGTGGCCTCCCAATGACCGCCCCAGTACACGAGCAGACAGGCTGGCCATCGGATTTAGCACTGTCCAGAAGGAAGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNISLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGAGGCCAGCGTGAGCTaGAGGGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIEASVS*RAAARS
Trigger: ACTGCGCGCCGCGGCCCTCAAGCTCACGCTGGCCTC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGAGGCCAGCGTGAGCTaGAGGGCCGCGGCGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKEASVS*RAAARS
Trigger: ACTGCGCGCCGCGGCCCTCAAGCTCACGCTGGCCTC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTA +
Preference number: 5 (lower is better)
Translates to: PTDWLLRKALALWLNPGSVLGRS*GGHLYV
Trigger: TACATATAAGTGGCCTCCCAATGACCGCCCCAGTAC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCCCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATCAGCACGCGTTCCACTaGGGGAAGCGCGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNQHAFH*GKRVHW
Trigger: CCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTG...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTGCCAGGCGCCGTCGTaGACCGGCGTGTCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESCQAPS*TGVSAN
Trigger: GTTGGCCGACACGCCGGTCAACGACGGCGCCTGGCA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTGACCACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: LAPQESASTLAESRIIGSLTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTTAGCACTGCTGGGTaGCTTCTCCTTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: LAPQESASTLAESRIIGSFSTAG*LLLDHS
Trigger: GCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS TCA 90 bp AATTTTTCCTTGGTGTATGTGCAGCTCCAGGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCACCAACACGGCTTCCTTCTGGACAGT +
Preference number: 5 (lower is better)
Translates to: NFSLVYVQLQVVTQS*GTVHTHQHGFLLDS
Trigger: ACTGTCCAGAAGGAAGCCGTGTTGGTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTACCTGGAGCTGCACATACACCAAGGAAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATTCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNSWLQS*PRKPVL
Trigger: GAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGA...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAGGCTCCCGCAGTGATTaGTGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: PTDWLLRKALALWLNPGSGSRSD*CCDFCV
Trigger: GACACAAAAATCACAACACAAATCACTGCGGGAGCC...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACCCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTTGACCACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSLTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDLGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRLGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: QESASTLAESRIIGSFFVLGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTTTAGCACTGCTGGGTaGCTTCTCCTTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSFSTAG*LLLDHS
Trigger: GCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS GCA 90 bp CGTGGCAATATACTCTTCTTTTCCTTGGTCGCCCATCATCAGGTGTaGCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: RGNILFFSLVAHHQV*QTFHIVVFLAAVLA
Trigger: GGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACCTGATGATGGGCGACCAAGGAAAAGAAGAGTATATTGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160800.9
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACAGCACGCGTTCCACTaGGGGAAGCGCGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKQHAFH*GKRVHW
Trigger: CCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGACCTCCACCCACTaGGCCTCGGCGCGGTCGATG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLTSTH*ASARSM
Trigger: CATCGACCGCGCCGAGGCCAAGTGGGTGGAGGTCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATTGACCTCCACCCACTaGGCCTCGGCGCGGTCGATG +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILTSTH*ASARSM
Trigger: CATCGACCGCGCCGAGGCCAAGTGGGTGGAGGTCAA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: LAPQESASTLAESRIIGSRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGGAGTGCGTAGTGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSGVRSV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACACTACGCACTCC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATTGTTTGAGCTCCCTTaGATGAGGTTAGCACCGTTT +
Preference number: 5 (lower is better)
Translates to: PTDWLLRKALALWLNPGSLFELP*MRLAPF
Trigger: AAACGGTGCTAACCTCATCAAAGGGAGCTCAAACAA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCACCTGTAACGTGGCATaGCCACCACTCCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSTCNVA*PPLLVK
Trigger: TTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS TCA 90 bp TTGAAAATTACTTACTATGTGCAGCTCCAGGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCACCAACACGGCTTCCTTCTGGACAGT +
Preference number: 5 (lower is better)
Translates to: LKITYYVQLQVVTQS*GTVHTHQHGFLLDS
Trigger: ACTGTCCAGAAGGAAGCCGTGTTGGTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTACCTGGAGCTGCACATAGTAAGTAATTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196559.5
CDS CCA 90 bp AAGGCACTTCACCGACCAGCCTCACATTCCCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCATATTCAGAACTTTCAAGCCATTGT +
Preference number: 5 (lower is better)
Translates to: KALHRPASHSPLWRC*HRSLLPYSELSSHC
Trigger: ACAATGGCTTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAATGTGAGGCTGGTCGGTGAAGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKSLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFISLRLD*TSTHLA
Trigger: GGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKSWLQS*PRKPVL
Trigger: GAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSWLQS*PRKPVL
Trigger: GAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVSWLQS*PRKPVL
Trigger: GAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNIARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCACATCAGTCCGTTCCTTaGAAGAGTTTTAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: PTDWLLRKALALWLNPGSHQSVP*KSFKGQ
Trigger: CTGTCCTTTAAAACTCTTCAAAGGAACGGACTGATG...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTACCATTCTCCATCATaGACTTTCTTCTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LAPQESASTLAESRIIGSYHSPS*TFFCRA
Trigger: AGCCCTGCAGAAGAAAGTCAATGATGGAGAATGGTA...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCGGCTCCCGCAGTGATTaGTGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSGSRSD*CCDFCV
Trigger: GACACAAAAATCACAACACAAATCACTGCGGGAGCC...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCAATCCTCTTGGCAGGTaGTGCTGGGCCCTTCGCATC +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSNPLGR*CWALRI
Trigger: GATGCGAAGGGCCCAGCACAACCTGCCAAGAGGATT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTA +
Preference number: 5 (lower is better)
Translates to: QESASTLAESRIIGSFFVVLGRS*GGHLYV
Trigger: TACATATAAGTGGCCTCCCAATGACCGCCCCAGTAC...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCCCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTTTGACCACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRLTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAA...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTTTTAGCACTGCTGGGTaGCTTCTCCTTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRFSTAG*LLLDHS
Trigger: GCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAA...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS GCA 90 bp CTCTTCTTTTCCTTTACTTTTACCTTGGTCGCCCATCATCAGGTGTaGCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LFFSFTFTLVAHHQV*QTFHIVVFLAAVLA
Trigger: GGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGAAAAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATACAGCACGCGTTCCACTaGGGGAAGCGCGTCCACTGG +
Preference number: 5 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIQHAFH*GKRVHW
Trigger: CCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTG...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGTCATGTCCCTGCGCTaGGACTTGACCTCCACCCAC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIVMSLR*DLTSTH
Trigger: GTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGAC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCCTGATACAATCTAGATaGACCGTGAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: LAPQESASTLAESRIIGSLIQSR*TVSFTR
Trigger: ACGTGTGAAACTCACGGTCAATCTAGATTGTATCAG...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAGGTGCCCAATGAAATaGGAGGGGACAGAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNIRCPMK*EGTEER
Trigger: CCTTTCTTCTGTCCCCTCCAATTTCATTGGGCACCT...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCAATTAAATGTCAGGCTTaGCAGGTGCCCAATGAAATT +
Preference number: 5 (lower is better)
Translates to: PTDWLLRKALALWLNPGSIKCQA*QVPNEI
Trigger: AATTTCATTGGGCACCTGCAAAGCCTGACATTTAAT...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAGATGCCAGGCAACCTaGAAAGCCTTCTTTGGCATG +
Preference number: 5 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDRCQAT*KAFFGM
Trigger: CATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATCT...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGCATCCTCTCTCAATTaGCCCATTGCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNIASSLN*PIAEES
Trigger: GCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGACCTGTAACGTGGCATaGCCACCACTCCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: QESASTLAESRIIGSFFVTCNVA*PPLLVK
Trigger: TTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS GCA 90 bp CAGCCTCACATTCCCCACTATGGCGATGTTGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAAGCCATTGTAGTAAAGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QPHIPHYGDVGIVLC*HIQNFQAIVVKTRE
Trigger: CTCTCTGGTCTTTACTACAATGGCTTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAATGTGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS GCA 90 bp GACCAGCCTCACATTCCCCACTATGGCGATGTTGGCATCGTTCTCTaGTGCCATATTCAGAACTTTCAAGCCATTGTAGTAAAGACCAGA +
Preference number: 5 (lower is better)
Translates to: DQPHIPHYGDVGIVL*CHIQNFQAIVVKTR
Trigger: TCTGGTCTTTACTACAATGGCTTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAATGTGAGGCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTTCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTSWLQS*PRKPVL
Trigger: GAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGA...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCACG +
Preference number: 5 (lower is better)
Translates to: FVLCLDVILLCFMNACGPHIVVF*AAVLAT
Trigger: CGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCACG +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSHIVVF*AAVLAT
Trigger: CGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCCACTGACTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: PTDWLLRKALALWLNPGSLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...TGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAGTCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTTAGGATCTCCTTGCTaGGCAAGTCGCGATAATTCC +
Preference number: 5 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDLGSPC*ASRDNS
Trigger: GGAATTATCGCGACTTGCCAAGCAAGGAGATCCTAA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTATGAAACTCCAGCCTaGTATGATCACCTGCCATTT +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSYETPA*YDHLPF
Trigger: AAATGGCAGGTGATCATACAAGGCTGGAGTTTCATA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTTTACTGTGTGGAGATaGCTGGTGTCCCGTGAAATC +
Preference number: 5 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDFTVWR*LVSREI
Trigger: GATTTCACGGGACACCAGCAATCTCCACACAGTAAA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATTTACTGTGTGGAGATaGCTGGTGTCCCGTGAAATC +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNIFTVWR*LVSREI
Trigger: GATTTCACGGGACACCAGCAATCTCCACACAGTAAA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAGGCTCCCGCAGTGATTaGTGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNIGSRSD*CCDFCV
Trigger: GACACAAAAATCACAACACAAATCACTGCGGGAGCC...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTGGCTCCTCAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCATATACAAGTCACTCTaGAGGTCTAGATTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LAPQESASTLAESRIIGSIYKSL*RSRFLA
Trigger: AGCCAGAAATCTAGACCTCAAGAGTGACTTGTATAT...GCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTGAGGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAATCCTCTTGGCAGGTaGTGCTGGGCCCTTCGCATC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESNPLGR*CWALRI
Trigger: GATGCGAAGGGCCCAGCACAACCTGCCAAGAGGATT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGAATCCTCTTGGCAGGTaGTGCTGGGCCCTTCGCATC +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVNPLGR*CWALRI
Trigger: GATGCGAAGGGCCCAGCACAACCTGCCAAGAGGATT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTA +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNVLGRS*GGHLYV
Trigger: TACATATAAGTGGCCTCCCAATGACCGCCCCAGTAC...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKPTMAM*ASFSAA
Trigger: GGCAGCAGAGAACGATGCCAACATCGCCATAGTGGG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPLGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTTAGCACTGCTGGGTaGCTTCTCCTTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSFSTAG*LLLDHS
Trigger: GCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGTCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQSWLQS*PRKPVL
Trigger: GAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGA...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCACG +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEHIVVF*AAVLAT
Trigger: CGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCATTAAATGTCAGGCTTaGCAGGTGCCCAATGAAATT +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSIKCQA*QVPNEI
Trigger: AATTTCATTGGGCACCTGCAAAGCCTGACATTTAAT...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTTTGTTTGAGCTCCCTTaGATGAGGTTAGCACCGTTT +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRLFELP*MRLAPF
Trigger: AAACGGTGCTAACCTCATCAAAGGGAGCTCAAACAA...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATTGTTTGAGCTCCCTTaGATGAGGTTAGCACCGTTT +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNILFELP*MRLAPF
Trigger: AAACGGTGCTAACCTCATCAAAGGGAGCTCAAACAA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCATATACAAGTCACTCTaGAGGTCTAGATTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSIYKSL*RSRFLA
Trigger: AGCCAGAAATCTAGACCTCAAGAGTGACTTGTATAT...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCAGATGCCAGGCAACCTaGAAAGCCTTCTTTGGCATG +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSRCQAT*KAFFGM
Trigger: CATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATCT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCGCATCCTCTCTCAATTaGCCCATTGCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSASSLN*PIAEES
Trigger: GCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGC...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTA +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEVLGRS*GGHLYV
Trigger: TACATATAAGTGGCCTCCCAATGACCGCCCCAGTAC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATACCTGTAACGTGGCATaGCCACCACTCCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNTCNVA*PPLLVK
Trigger: TTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCACCTGTAACGTGGCATaGCCACCACTCCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSTCNVA*PPLLVK
Trigger: TTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCACG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKHIVVF*AAVLAT
Trigger: CGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCACG +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIHIVVF*AAVLAT
Trigger: CGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLERPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCCAGACCTTCCACATaGTTGTCTTCTTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESARPST*LSSWLQ
Trigger: CTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCATCAGTCCGTTCCTTaGAAGAGTTTTAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: LCLDVILLCFMNACGPHRHQSVP*KSFKGQ
Trigger: CTGTCCTTTAAAACTCTTCAAAGGAACGGACTGATG...ACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATTTCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNFHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGAA...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072671.14
CDS-3UTR CAA 90 bp CTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCTTCTTCTGCAGGGCTTaGATTTTTATAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: LLCFMNACGPHRLLERPSFFCRA*IFIVPD
Trigger: ATCAGGTACTATAAAAATCAAAGCCCTGCAGAAGAA...GCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATCTCTGCACATGCCATaGTTTTTGCAAGGATTGCTA +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNISLHMP*FLQGLL
Trigger: TAGCAATCCTTGCAAAAACAATGGCATGTGCAGAGA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAAGGTGCCCAATGAAATaGGAGGGGACAGAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLERCPMK*EGTEER
Trigger: CCTTTCTTCTGTCCCCTCCAATTTCATTGGGCACCT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTTACTGTGTGGAGATaGCTGGTGTCCCGTGAAATC +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSFTVWR*LVSREI
Trigger: GATTTCACGGGACACCAGCAATCTCCACACAGTAAA...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTTTACTGTGTGGAGATaGCTGGTGTCCCGTGAAATC +
Preference number: 5 (lower is better)
Translates to: FVLCLDVILLCFMNACGPFTVWR*LVSREI
Trigger: GATTTCACGGGACACCAGCAATCTCCACACAGTAAA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAAGATGCCAGGCAACCTaGAAAGCCTTCTTTGGCATG +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLERCQAT*KAFFGM
Trigger: CATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATCT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTAATCCTCTTGGCAGGTaGTGCTGGGCCCTTCGCATC +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTNPLGR*CWALRI
Trigger: GATGCGAAGGGCCCAGCACAACCTGCCAAGAGGATT...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTA +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVLGRS*GGHLYV
Trigger: TACATATAAGTGGCCTCCCAATGACCGCCCCAGTAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTA +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVLGRS*GGHLYV
Trigger: TACATATAAGTGGCCTCCCAATGACCGCCCCAGTAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATTGACCACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTGACCACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGACCACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTTGACCACAGCCCCATaGGACTGTGCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLTTAP*DCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATTTAGCACTGCTGGGTaGCTTCTCCTTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIFSTAG*LLLDHS
Trigger: GCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTAGCACTGCTGGGTaGCTTCTCCTTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKFSTAG*LLLDHS
Trigger: GCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTTTAGCACTGCTGGGTaGCTTCTCCTTGACCACAGC +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPFSTAG*LLLDHS
Trigger: GCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS CCA 90 bp ACCTGTAACGTGGCATTGCCACCACTCCTTGTGAAACGTACTACATaGTATTTCCCATCATTAATGATTGCATTAGACTCTTCGATGGCG +
Preference number: 5 (lower is better)
Translates to: TCNVALPPLLVKRTT*YFPSLMIALDSSMA
Trigger: CGCCATCGAAGAGTCTAATGCAATCATTAATGATGGGAAATACCATGTAGTACGTTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLESFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTGGCCATTTGGCTCCGTaGTACGGAAATCAAATGATA +
Preference number: 5 (lower is better)
Translates to: FVLCLDVILLCFMNACGPGHLAP*YGNQMI
Trigger: TATCATTTGATTTCCGTACAACGGAGCCAAATGGCC...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGAGTGCGTAGTGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKGVRSV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACACTACGCACTCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGAGTGCGTAGTGTGTaGACAGAAATGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGVRSV*TEMVPD
Trigger: GTCAGGTACCATTTCTGTCAACACACTACGCACTCC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGTTTTGCTGTCTCTTTaGAGCAGGATGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEVLLSL*SRMASL
Trigger: GAGTGAAGCCATCCTGCTCAAAAGAGACAGCAAAAC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAGGTGCCCAATGAAATaGGAGGGGACAGAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKRCPMK*EGTEER
Trigger: CCTTTCTTCTGTCCCCTCCAATTTCATTGGGCACCT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCAGGTGCCCAATGAAATaGGAGGGGACAGAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPRCPMK*EGTEER
Trigger: CCTTTCTTCTGTCCCCTCCAATTTCATTGGGCACCT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAGATGCCAGGCAACCTaGAAAGCCTTCTTTGGCATG +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIRCQAT*KAFFGM
Trigger: CATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATCT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAGATGCCAGGCAACCTaGAAAGCCTTCTTTGGCATG +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRCQAT*KAFFGM
Trigger: CATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATCT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTCTCAATTTGCCCATaGCAGAAGAGAGCATCCGAG +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLSICP*QKRASE
Trigger: CTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACTCTCAATTTGCCCATaGCAGAAGAGAGCATCCGAG +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILSICP*QKRASE
Trigger: CTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTCTCAATTTGCCCATaGCAGAAGAGAGCATCCGAG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLSICP*QKRASE
Trigger: CTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCTCTCAATTTGCCCATaGCAGAAGAGAGCATCCGAG +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLSICP*QKRASE
Trigger: CTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAG...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGCATCCTCTCTCAATTaGCCCATTGCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKASSLN*PIAEES
Trigger: GCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGCATCCTCTCTCAATTaGCCCATTGCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESASSLN*PIAEES
Trigger: GCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: QESASTLAESRIIGSFFVICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCAACTCCAATTTTTCCTaGGTGTATGTGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSNSNFS*VYVQLQ
Trigger: CTGGAGCTGCACATACACCAAGGAAAAATTGGAGTT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATAACTCCAATTTTTCCTaGGTGTATGTGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNNSNFS*VYVQLQ
Trigger: CTGGAGCTGCACATACACCAAGGAAAAATTGGAGTT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAACCTGTAACGTGGCATaGCCACCACTCCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKTCNVA*PPLLVK
Trigger: TTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTACCTGTAACGTGGCATaGCCACCACTCCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESTCNVA*PPLLVK
Trigger: TTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGAC +
Preference number: 5 (lower is better)
Translates to: VCLGIRSPFKCILLHCYILGCFS*TTAPLD
Trigger: GTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAG...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS CCA 90 bp AGATGCCAGGCAACCTTGAAAGCCTTCTTTGGCATGGACCAGTTTTaGCAGGGATTTATATGTTTCTTTAGCCACTCCTCCAATATACAA +
Preference number: 5 (lower is better)
Translates to: RCQATLKAFFGMDQF*QGFICFFSHSSNIQ
Trigger: TTGTATATTGGAGGAGTGGCTAAAGAAACATATAAATCCCTGCCAAAACTGGTCCATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESFHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTCCATCCACTGATATaGTCACCTGACGCAGATTCC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKFHPLI*SPDADS
Trigger: GGAATCTGCGTCAGGTGACAATATCAGTGGATGGAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVRQPIK*LLTGDP
Trigger: AGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTAGGATCTCCTTGCTaGGCAAGTCGCGATAATTCC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLGSPC*ASRDNS
Trigger: GGAATTATCGCGACTTGCCAAGCAAGGAGATCCTAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTAGGATCTCCTTGCTaGGCAAGTCGCGATAATTCC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLGSPC*ASRDNS
Trigger: GGAATTATCGCGACTTGCCAAGCAAGGAGATCCTAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTTAGGATCTCCTTGCTaGGCAAGTCGCGATAATTCC +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLGSPC*ASRDNS
Trigger: GGAATTATCGCGACTTGCCAAGCAAGGAGATCCTAA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAGGCCATTTGGCTCCGTaGTACGGAAATCAAATGATA +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEGHLAP*YGNQMI
Trigger: TATCATTTGATTTCCGTACAACGGAGCCAAATGGCC...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATATTCTTCTGCAGGGCTTaGATTTTTATAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: CFMNACGPHRLLERPSNIFFCRA*IFIVPD
Trigger: ATCAGGTACTATAAAAATCAAAGCCCTGCAGAAGAA...TATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TATGAATGCGTGCGGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACTTCTTCTGCAGGGCTTaGATTTTTATAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: YECVRSSPSFRTSQQHKDFFCRA*IFIVPD
Trigger: ATCAGGTACTATAAAAATCAAAGCCCTGCAGAAGAA...GTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACCGCACGCATTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATACCATTCTCCATCATaGACTTTCTTCTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEYHSPS*TFFCRA
Trigger: AGCCCTGCAGAAGAAAGTCAATGATGGAGAATGGTA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTTGCTGTCTCTTTaGAGCAGGATGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKVLLSL*SRMASL
Trigger: GAGTGAAGCCATCCTGCTCAAAAGAGACAGCAAAAC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGTTTTGCTGTCTCTTTaGAGCAGGATGGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESVLLSL*SRMASL
Trigger: GAGTGAAGCCATCCTGCTCAAAAGAGACAGCAAAAC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTTCTCTGCACATGCCATaGTTTTTGCAAGGATTGCTA +
Preference number: 5 (lower is better)
Translates to: FVLCLDVILLCFMNACGPSLHMP*FLQGLL
Trigger: TAGCAATCCTTGCAAAAACAATGGCATGTGCAGAGA...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATTATGAAACTCCAGCCTaGTATGATCACCTGCCATTT +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNYETPA*YDHLPF
Trigger: AAATGGCAGGTGATCATACAAGGCTGGAGTTTCATA...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CAGGAAAGCGCTAGCACTTTGGCTGAATCCAGGATCATAGGTAGCTTCTTTGTGTCTATATCACCATTTTaGCACAAGTCTATGTATGCC +
Preference number: 5 (lower is better)
Translates to: QESASTLAESRIIGSFFVSISPF*HKSMYA
Trigger: GGCATACATAGACTTGTGCAAAAATGGTGATATAGA...CACAAAGAAGCTACCTATGATCCTGGATTCAGCCAAAGTGCTAGCGCTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATTTACTGTGTGGAGATaGCTGGTGTCCCGTGAAATC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIFTVWR*LVSREI
Trigger: GATTTCACGGGACACCAGCAATCTCCACACAGTAAA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTTACTGTGTGGAGATaGCTGGTGTCCCGTGAAATC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKFTVWR*LVSREI
Trigger: GATTTCACGGGACACCAGCAATCTCCACACAGTAAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTGGCTCCCGCAGTGATTaGTGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESGSRSD*CCDFCV
Trigger: GACACAAAAATCACAACACAAATCACTGCGGGAGCC...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTA +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTVLGRS*GGHLYV
Trigger: TACATATAAGTGGCCTCCCAATGACCGCCCCAGTAC...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAAACTCCAATTTTTCCTaGGTGTATGTGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLENSNFS*VYVQLQ
Trigger: CTGGAGCTGCACATACACCAAGGAAAAATTGGAGTT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATACTCTTCTTTTCCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKILFFS*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGAAAAGAAGAGTAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000160800.9
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAAGACCTTCCACATTGTaGTCTTCTTGGCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIRPSTL*SSWLQS
Trigger: GGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATAAGTATTCAGATCCCTaGAACGTGGCAATATACTCT +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNKYSDP*NVAIYS
Trigger: AGAGTATATTGCCACGTTCAAGGGATCTGAATACTT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCAAGTATTCAGATCCCTaGAACGTGGCAATATACTCT +
Preference number: 5 (lower is better)
Translates to: FCVVPRCNTPLLYECVRSKYSDP*NVAIYS
Trigger: AGAGTATATTGCCACGTTCAAGGGATCTGAATACTT...GGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAGGCCATTTGGCTCCGTaGTACGGAAATCAAATGATA +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIGHLAP*YGNQMI
Trigger: TATCATTTGATTTCCGTACAACGGAGCCAAATGGCC...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGGCCATTTGGCTCCGTaGTACGGAAATCAAATGATA +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKGHLAP*YGNQMI
Trigger: TATCATTTGATTTCCGTACAACGGAGCCAAATGGCC...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCGGCCATTTGGCTCCGTaGTACGGAAATCAAATGATA +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPGHLAP*YGNQMI
Trigger: TATCATTTGATTTCCGTACAACGGAGCCAAATGGCC...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATACCATTCTCCATCATaGACTTTCTTCTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKYHSPS*TFFCRA
Trigger: AGCCCTGCAGAAGAAAGTCAATGATGGAGAATGGTA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTACCATTCTCCATCATaGACTTTCTTCTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESYHSPS*TFFCRA
Trigger: AGCCCTGCAGAAGAAAGTCAATGATGGAGAATGGTA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTATTAAATGTCAGGCTTaGCAGGTGCCCAATGAAATT +
Preference number: 5 (lower is better)
Translates to: FVLCLDVILLCFMNACGPIKCQA*QVPNEI
Trigger: AATTTCATTGGGCACCTGCAAAGCCTGACATTTAAT...AGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTGTTTGAGCTCCCTTaGATGAGGTTAGCACCGTTT +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLFELP*MRLAPF
Trigger: AAACGGTGCTAACCTCATCAAAGGGAGCTCAAACAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATTGTTTGAGCTCCCTTaGATGAGGTTAGCACCGTTT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILFELP*MRLAPF
Trigger: AAACGGTGCTAACCTCATCAAAGGGAGCTCAAACAA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTGTTTGAGCTCCCTTaGATGAGGTTAGCACCGTTT +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLFELP*MRLAPF
Trigger: AAACGGTGCTAACCTCATCAAAGGGAGCTCAAACAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTGCATCCTCTCTCAATTaGCCCATTGCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTASSLN*PIAEES
Trigger: GCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGC...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GGTCCTCACCGTCTTTTAGAACGTCCCAGCAACATAAAGACAAGCAGAGTAAATATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: GPHRLLERPSNIKTSRVNICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...ATTTACTCTGCTTGTCTTTATGTTGCTGGGACGTTCTAAAAGACGGTGAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAAACTCCAATTTTTCCTaGGTGTATGTGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKNSNFS*VYVQLQ
Trigger: CTGGAGCTGCACATACACCAAGGAAAAATTGGAGTT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAACTCCAATTTTTCCTaGGTGTATGTGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFINSNFS*VYVQLQ
Trigger: CTGGAGCTGCACATACACCAAGGAAAAATTGGAGTT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAACCTGTAACGTGGCATaGCCACCACTCCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: FKVSWNQNLNEANHRFVITCNVA*PPLLVK
Trigger: TTTCACAAGGAGTGGTGGCAATGCCACGTTACAGGT...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTTCCTTTACTTTTACCTaGGTCGCCCATCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTSFTFT*VAHHQV
Trigger: CACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCATCAGTCCGTTCCTTaGAAGAGTTTTAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESHQSVP*KSFKGQ
Trigger: CTGTCCTTTAAAACTCTTCAAAGGAACGGACTGATG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACATCAGTCCGTTCCTTaGAAGAGTTTTAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKHQSVP*KSFKGQ
Trigger: CTGTCCTTTAAAACTCTTCAAAGGAACGGACTGATG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTCTCTGCACATGCCATaGTTTTTGCAAGGATTGCTA +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESSLHMP*FLQGLL
Trigger: TAGCAATCCTTGCAAAAACAATGGCATGTGCAGAGA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATCTCTGCACATGCCATaGTTTTTGCAAGGATTGCTA +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKSLHMP*FLQGLL
Trigger: TAGCAATCCTTGCAAAAACAATGGCATGTGCAGAGA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTCTGATACAATCTAGATaGACCGTGAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLIQSR*TVSFTR
Trigger: ACGTGTGAAACTCACGGTCAATCTAGATTGTATCAG...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATACTGATACAATCTAGATaGACCGTGAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFILIQSR*TVSFTR
Trigger: ACGTGTGAAACTCACGGTCAATCTAGATTGTATCAG...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAACTGATACAATCTAGATaGACCGTGAGTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKLIQSR*TVSFTR
Trigger: ACGTGTGAAACTCACGGTCAATCTAGATTGTATCAG...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTATGAAACTCCAGCCTaGTATGATCACCTGCCATTT +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESYETPA*YDHLPF
Trigger: AAATGGCAGGTGATCATACAAGGCTGGAGTTTCATA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTATGAAACTCCAGCCTaGTATGATCACCTGCCATTT +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVYETPA*YDHLPF
Trigger: AAATGGCAGGTGATCATACAAGGCTGGAGTTTCATA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATATGAAACTCCAGCCTaGTATGATCACCTGCCATTT +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKYETPA*YDHLPF
Trigger: AAATGGCAGGTGATCATACAAGGCTGGAGTTTCATA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTGGCTCCCGCAGTGATTaGTGTTGTGATTTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTGSRSD*CCDFCV
Trigger: GACACAAAAATCACAACACAAATCACTGCGGGAGCC...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAATATACAAGTCACTCTaGAGGTCTAGATTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEIYKSL*RSRFLA
Trigger: AGCCAGAAATCTAGACCTCAAGAGTGACTTGTATAT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGCTCTCAATTTGCCCATaGCAGAAGAGAGCATCCGAG +
Preference number: 5 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQLSICP*QKRASE
Trigger: CTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAG...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAAATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTAAGTATTCAGATCCCTaGAACGTGGCAATATACTCT +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESKYSDP*NVAIYS
Trigger: AGAGTATATTGCCACGTTCAAGGGATCTGAATACTT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAGTATTCAGATCCCTaGAACGTGGCAATATACTCT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIKYSDP*NVAIYS
Trigger: AGAGTATATTGCCACGTTCAAGGGATCTGAATACTT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCAAGTATTCAGATCCCTaGAACGTGGCAATATACTCT +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPKYSDP*NVAIYS
Trigger: AGAGTATATTGCCACGTTCAAGGGATCTGAATACTT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLELYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TTCAAGGTCTCCTGGAATCAGAATCTCAATGAAGCAAATCACCGATTTGTTATAGGCCATTTGGCTCCGTaGTACGGAAATCAAATGATA +
Preference number: 5 (lower is better)
Translates to: FKVSWNQNLNEANHRFVIGHLAP*YGNQMI
Trigger: TATCATTTGATTTCCGTACAACGGAGCCAAATGGCC...TATAACAAATCGGTGATTTGCTTCATTGAGATTCTGATTCCAGGAGACCTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp GATGTAATACTCCTTTGCTTTATGAATGCGTGCGGTCCTCACCGTCTTTTAGAATTCTTCTGCAGGGCTTaGATTTTTATAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: DVILLCFMNACGPHRLLEFFCRA*IFIVPD
Trigger: ATCAGGTACTATAAAAATCAAAGCCCTGCAGAAGAA...TTCTAAAAGACGGTGAGGACCGCACGCATTCATAAAGCAAAGGAGTATTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTTACCATTCTCCATCATaGACTTTCTTCTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTYHSPS*TFFCRA
Trigger: AGCCCTGCAGAAGAAAGTCAATGATGGAGAATGGTA...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATTAAATGTCAGGCTTaGCAGGTGCCCAATGAAATT +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKIKCQA*QVPNEI
Trigger: AATTTCATTGGGCACCTGCAAAGCCTGACATTTAAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATTAAATGTCAGGCTTaGCAGGTGCCCAATGAAATT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIIKCQA*QVPNEI
Trigger: AATTTCATTGGGCACCTGCAAAGCCTGACATTTAAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATATACAAGTCACTCTaGAGGTCTAGATTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIIYKSL*RSRFLA
Trigger: AGCCAGAAATCTAGACCTCAAGAGTGACTTGTATAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTATCTGTCCACCACCTTaGCTAAAGATATATGTTGTC +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESICPPP*LKIYVV
Trigger: GACAACATATATCTTTAGCAAAGGTGGTGGACAGAT...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS-3UTR CAA 90 bp CTCAATGAAGCAAATCACCGATTTGTTATAATACCTTGGCACAACTGTCTAACTCATCAGTCCGTTCCTTaGAAGAGTTTTAAAGGACAG +
Preference number: 5 (lower is better)
Translates to: LNEANHRFVIIPWHNCLTHQSVP*KSFKGQ
Trigger: CTGTCCTTTAAAACTCTTCAAAGGAACGGACTGATG...AGTTAGACAGTTGTGCCAAGGTATTATAACAAATCGGTGATTTGCTTCATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp CCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAAGTTTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: PPDRIPCLLLYVLHKKESLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...ACTTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTTATATACAACCTCTTaGAGACAGCCCATAAAGTTG +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPLYTTS*RQPIKL
Trigger: CAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATAAAAAGGAAATTCTTCTGCAGGGCTTaGATTTTTATAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: SLLIAFPVFFCMCFIKRKFFCRA*IFIVPD
Trigger: ATCAGGTACTATAAAAATCAAAGCCCTGCAGAAGAA...TTTCCTTTTTATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATTCTTCTGCAGGGCTTaGATTTTTATAGTACCTGAT +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFIFFCRA*IFIVPD
Trigger: ATCAGGTACTATAAAAATCAAAGCCCTGCAGAAGAA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAAGAGTTTTCCCTCCTGATCGCATTCCCTGTCTTCTTTTGTATGTGCTTCATATCTATATCACCATTTTaGCACAAGTCTATGTATGCC +
Preference number: 5 (lower is better)
Translates to: KEFSLLIAFPVFFCMCFISISPF*HKSMYA
Trigger: GGCATACATAGACTTGTGCAAAAATGGTGATATAGA...TATGAAGCACATACAAAAGAAGACAGGGAATGCGATCAGGAGGGAAAACTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTTGGTTTTGTGTTGTGCCTCGATGTAATACTCCTTTGCTTTATGAATGCGTGTCTATATCACCATTTTaGCACAAGTCTATGTATGCC +
Preference number: 5 (lower is better)
Translates to: CWFCVVPRCNTPLLYECVSISPF*HKSMYA
Trigger: GGCATACATAGACTTGTGCAAAAATGGTGATATAGA...CACGCATTCATAAAGCAAAGGAGTATTACATCGAGGCACAACACAAAACCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp AAGACAAGCAGAGTAAATGAAAACACTGCGGATGTTAGGGAATTTTATTGGCCCTCTATATCACCATTTTaGCACAAGTCTATGTATGCC +
Preference number: 5 (lower is better)
Translates to: KTSRVNENTADVREFYWPSISPF*HKSMYA
Trigger: GGCATACATAGACTTGTGCAAAAATGGTGATATAGA...GGGCCAATAAAATTCCCTAACATCCGCAGTGTTTTCATTTACTCTGCTTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS-3UTR CAA 90 bp TGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTCAGAACTCCAATTTTTCCTaGGTGTATGTGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CLGIRSPFKCILLHCYIQNSNFS*VYVQLQ
Trigger: CTGGAGCTGCACATACACCAAGGAAAAATTGGAGTT...CTGAATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CAA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTATATACAAGTCACTCTaGAGGTCTAGATTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VCLGIRSPFKCILLHCYIIYKSL*RSRFLA
Trigger: AGCCAGAAATCTAGACCTCAAGAGTGACTTGTATAT...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS-3UTR CAA 90 bp GTGTGTCTGGGGATAAGATCTCCTTTCAAATGCATTCTTCTTCATTGTTATATTTCTATATCACCATTTTaGCACAAGTCTATGTATGCC +
Preference number: 5 (lower is better)
Translates to: VCLGIRSPFKCILLHCYISISPF*HKSMYA
Trigger: GGCATACATAGACTTGTGCAAAAATGGTGATATAGA...AATATAACAATGAAGAAGAATGCATTTGAAAGGAGATCTTATCCCCAGACACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072671.14
ENSMUST00000160844.10
CDS TCA 72 bp GGCGGCGGATGCGCACGCTGTGCCAGGCGCCGTCGTTaGCCGGCGTGTCGGCCAACAGCGTGGCGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: GGGCARCARRRR*PACRPTAWRAR
Trigger: CCGAGCCCGCCACGCTGTTGGCCGACACGCCGGTCAACGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp AAGGGCTCGCGCTCGCGCACCGAGGCCAGCGTGAGCTaGAGGGCCGCGGCGCGCAGTTCGGGTGGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: KGSRSRTEASVS*RAAARSSGGRP
Trigger: CGGCCTGCCACCCGAACTGCGCGCCGCGGCCCTCAAGCTCACGCTGGCCTCGGTGCGCGAGCGCGAGCCCTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp TCCACTGGCCCTCGGCGCCCGGGAACTCCAGCCCGCTaGCCAGCTCTGCCCAGCAGCCCAGCAGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: STGPRRPGTPAR*PALPSSPAAAA
Trigger: CGCTGCTGCTGCTGGGCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCCCGGGCGCCGAGGGCCAGTGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp CAGCCCTTGAAGGGCTCGCGCTCGCGCACCGAGGCCAGCGTGAGCTaGAGGGCCGCGGCGCGCAGTTCGGGTGGCAGGCCGCCCACGAAG +
Preference number: 6 (lower is better)
Translates to: QPLKGSRSRTEASVS*RAAARSSGGRPPTK
Trigger: CTTCGTGGGCGGCCTGCCACCCGAACTGCGCGCCGCGGCCCTCAAGCTCACGCTGGCCTCGGTGCGCGAGCGCGAGCCCTTCAAGGGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 72 bp CGGCCTGGTCGTCGACCACGGAGCACACGCCCCCGTTaGGGCACACGCCGCCCTCGCCTTCTTCGCCCGCCT +
Preference number: 6 (lower is better)
Translates to: RPGRRPRSTRPR*GTRRPRLLRPP
Trigger: AGGCGGGCGAAGAAGGCGAGGGCGGCGTGTGCCTCAACGGGGGCGTGTGCTCCGTGGTCGACGACCAGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp CTCGGCGCCCGGGAACTCCAGCCCGCTGCCCAGCTCTaGCCAGCAGCCCAGCAGCAGCAGCGACAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: LGARELQPAAQL*PAAQQQQRQAE
Trigger: CTCTGCCTGTCGCTGCTGCTGCTGGGCTGCTGGGCAGAGCTGGGCAGCGGGCTGGAGTTCCCGGGCGCCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp CCCTCGCCTTCTTCGCCCGCCTCGCATGGGCTCCCGCCACCGCTGTaGGGAGGCTCGTCGTCCAGCTTGACCTCGCCGCCGTCCACCGGC +
Preference number: 6 (lower is better)
Translates to: PSPSSPASHGLPPPL*GGSSSSLTSPPSTG
Trigger: GCCGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGCCTCCCAACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAAGAAGGCGAGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 72 bp TCCCGCCACCGCTGTTGGGAGGCTCGTCGTCCAGCTTaGCCTCGCCGCCGTCCACCGGCAGGGCCTGTGACG +
Preference number: 6 (lower is better)
Translates to: SRHRCWEARRPA*PRRRPPAGPVT
Trigger: CGTCACAGGCCCTGCCGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGCCTCCCAACAGCGGTGGCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp CTCCCGCCACCGCTGTTGGGAGGCTCGTCGTCCAGCTaGACCTCGCCGCCGTCCACCGGCAGGGCCTGTGAC +
Preference number: 6 (lower is better)
Translates to: LPPPLLGGSSSS*TSPPSTGRACD
Trigger: GTCACAGGCCCTGCCGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGCCTCCCAACAGCGGTGGCGGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp TCTTCGCCCGCCTCGCATGGGCTCCCGCCACCGCTGTaGGGAGGCTCGTCGTCCAGCTTGACCTCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SSPASHGLPPPL*GGSSSSLTSPP
Trigger: CGGCGGCGAGGTCAAGCTGGACGACGAGCCTCCCAACAGCGGTGGCGGGAGCCCATGCGAGGCGGGCGAAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp CAGTCGCATACGGCCTGGTCGTCGACCACGGAGCACACGCCCCCGTaGAGGCACACGCCGCCCTCGCCTTCTTCGCCCGCCTCGCATGGG +
Preference number: 6 (lower is better)
Translates to: QSHTAWSSTTEHTPP*RHTPPSPSSPASHG
Trigger: CCCATGCGAGGCGGGCGAAGAAGGCGAGGGCGGCGTGTGCCTCAACGGGGGCGTGTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp GTGGCGGGCTCGGCGCAGAAGATGGAGAAGCTGAGCTaGAGGCGGCCGCCGCGCGTCAGGATGAGCTCGAGG +
Preference number: 6 (lower is better)
Translates to: VAGSAQKMEKLS*RRPPRVRMSSR
Trigger: CCTCGAGCTCATCCTGACGCGCGGCGGCCGCCTGCAGCTCAGCTTCTCCATCTTCTGCGCCGAGCCCGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp GTGGTGTTGCGGAACTGGCGGCGGATGCGCACGCTGTaGCAGGCGCCGTCGTTGACCGGCGTGTCGGCCAAC +
Preference number: 6 (lower is better)
Translates to: VVLRNWRRMRTL*QAPSLTGVSAN
Trigger: GTTGGCCGACACGCCGGTCAACGACGGCGCCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCAC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp TCGCATGGGCTCCCGCCACCGCTGTTGGGAGGCTCGTCGTCCAGCTaGACCTCGCCGCCGTCCACCGGCAGGGCCTGTGACGAGTTGACC +
Preference number: 6 (lower is better)
Translates to: SHGLPPPLLGGSSSS*TSPPSTGRACDELT
Trigger: GGTCAACTCGTCACAGGCCCTGCCGGTGGACGGCGGCGAGGTCAAGCTGGACGACGAGCCTCCCAACAGCGGTGGCGGGAGCCCATGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp GGCAGGGCCTGTGACGAGTTGACCCGGACGTCACGGATCCAGCCCTaGAAGGGCTCGCGCTCGCGCACCGAGGCCAGCGTGAGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: GRACDELTRTSRIQP*KGSRSRTEASVSLR
Trigger: CCTCAAGCTCACGCTGGCCTCGGTGCGCGAGCGCGAGCCCTTCAAGGGCTGGATCCGTGACGTCCGGGTCAACTCGTCACAGGCCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp TCCAGCTTGACCTCGCCGCCGTCCACCGGCAGGGCCTGTGACGAGTaGACCCGGACGTCACGGATCCAGCCCTTGAAGGGCTCGCGCTCG +
Preference number: 6 (lower is better)
Translates to: SSLTSPPSTGRACDE*TRTSRIQPLKGSRS
Trigger: CGAGCGCGAGCCCTTCAAGGGCTGGATCCGTGACGTCCGGGTCAACTCGTCACAGGCCCTGCCGGTGGACGGCGGCGAGGTCAAGCTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 72 bp GGAAGCTCATCTCGCTCTCGCAGCACGCGTTCCACTTaGGGAAGCGCGTCCACTGGCCCTCGGCGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: GSSSRSRSTRST*GSASTGPRRPG
Trigger: TCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTGCGAGAGCGAGATGAGCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 72 bp CCACGGAAGCCGGTCCTCGAGCAGTCGCATACGGCCTaGTCGTCGACCACGGAGCACACGCCCCCGTTGAGG +
Preference number: 6 (lower is better)
Translates to: PRKPVLEQSHTA*SSTTEHTPPLR
Trigger: CCTCAACGGGGGCGTGTGCTCCGTGGTCGACGACCAGGCCGTATGCGACTGCTCGAGGACCGGCTTCCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp TGGAAGCTCATCTCGCTCTCGCAGCACGCGTTCCACTaGGGGAAGCGCGTCCACTGGCCCTCGGCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: WKLISLSQHAFH*GKRVHWPSAPG
Trigger: CCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTGCGAGAGCGAGATGAGCTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp ACCTCGCCGCCGTCCACCGGCAGGGCCTGTGACGAGTaGACCCGGACGTCACGGATCCAGCCCTTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: TSPPSTGRACDE*TRTSRIQPLKG
Trigger: GCCCTTCAAGGGCTGGATCCGTGACGTCCGGGTCAACTCGTCACAGGCCCTGCCGGTGGACGGCGGCGAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp ACTTGGCCTCGGCGCGGTCGATGTAGAGCGTGGTGTTaGGGAACTGGCGGCGGATGCGCACGCTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: TWPRRGRCRAWC*GTGGGCARCAR
Trigger: CCTGGCACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTACATCGACCGCGCCGAGGCCAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 72 bp CCACCCACTTGGCCTCGGCGCGGTCGATGTAGAGCGTaGTGTTGCGGAACTGGCGGCGGATGCGCACGCTGT +
Preference number: 6 (lower is better)
Translates to: PPTWPRRGRCRA*CCGTGGGCARC
Trigger: ACAGCGTGCGCATCCGCCGCCAGTTCCGCAACACCACGCTCTACATCGACCGCGCCGAGGCCAAGTGGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp TGTGACGAGTTGACCCGGACGTCACGGATCCAGCCCTaGAAGGGCTCGCGCTCGCGCACCGAGGCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: CDELTRTSRIQP*KGSRSRTEASV
Trigger: CACGCTGGCCTCGGTGCGCGAGCGCGAGCCCTTCAAGGGCTGGATCCGTGACGTCCGGGTCAACTCGTCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp GTCTTCAGCTGGAAGCTCATCTCGCTCTCGCAGCACGCGTTCCACTaGGGGAAGCGCGTCCACTGGCCCTCGGCGCCCGGGAACTCCAGC +
Preference number: 6 (lower is better)
Translates to: VFSWKLISLSQHAFH*GKRVHWPSAPGNSS
Trigger: GCTGGAGTTCCCGGGCGCCGAGGGCCAGTGGACGCGCTTCCCCAAGTGGAACGCGTGCTGCGAGAGCGAGATGAGCTTCCAGCTGAAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp CCTCGTCGTCGAAGTAGAGCACGAGGCCGCGGGCACTaGGCGTCTTCAGCTGGAAGCTCATCTCGCTCTCGC +
Preference number: 6 (lower is better)
Translates to: PRRRSRARGRGH*ASSAGSSSRSR
Trigger: GCGAGAGCGAGATGAGCTTCCAGCTGAAGACGCGCAGTGCCCGCGGCCTCGTGCTCTACTTCGACGACGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp AGCCCGCTGAACACCGTCATGTCCCTGCGCTTGGACTaGACCTCCACCCACTTGGCCTCGGCGCGGTCGATG +
Preference number: 6 (lower is better)
Translates to: SPLNTVMSLRLD*TSTHLASARSM
Trigger: CATCGACCGCGCCGAGGCCAAGTGGGTGGAGGTCAAGTCCAAGCGCAGGGACATGACGGTGTTCAGCGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 72 bp CTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTaGTGGGGTTGGCTGAGCTCGGCTCACAGGGGTCAA +
Preference number: 6 (lower is better)
Translates to: LQSLGMVHGHLL*WGWLSSAHRGQ
Trigger: TTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS CCA 72 bp CAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTaGGGTTGGCTAACCCACCTGAGCTCGGCTCACAGG +
Preference number: 6 (lower is better)
Translates to: QSLGMVHGHLLW*GWLTHLSSAHR
Trigger: CCTGTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS CCA 72 bp CTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTaGTGGGGTTGGCTAACCCACCTGAGCTCGGCTCAC +
Preference number: 6 (lower is better)
Translates to: LQSLGMVHGHLL*WGWLTHLSSAH
Trigger: GTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS CAA 72 bp CCTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTaGGCTAACCCACCTGAGCTCGGCTCACAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: PGYGSRPPTLVG*ANPPELGSQGS
Trigger: TGACCCCTGTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS GCA 72 bp CTGCTGCGACAATCCCCACCACCATGCCAGTGGTACTaGTGGACTCCCGAATCACCTCTGCAGAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: LLRQSPPPCQWY*WTPESPLQSLG
Trigger: ACCCAGGCTCTGCAGAGGTGATTCGGGAGTCCAGCAGTACCACTGGCATGGTGGTGGGGATTGTCGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS CCA 72 bp CAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTaGGGTTGGCTGAGCTCGGCTCACAGGGGTCAATGT +
Preference number: 6 (lower is better)
Translates to: QSLGMVHGHLLW*GWLSSAHRGQC
Trigger: ACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS CCA 72 bp CTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTTaGCTAACCCACCTGAGCTCGGCTCACAGGGGTCAA +
Preference number: 6 (lower is better)
Translates to: LGMVHGHLLWWG*LTHLSSAHRGQ
Trigger: TTGACCCCTGTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS CAA 72 bp CCTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTaGGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCA +
Preference number: 6 (lower is better)
Translates to: PGYGSRPPTLVG*AELGSQGSMSS
Trigger: TGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS CAA 90 bp AGGTGTGCCAGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTCGAGCAGTCGCATACGGCCTGGTCG +
Preference number: 6 (lower is better)
Translates to: RCARPSTLLSSWLQS*PRKPVLEQSHTAWS
Trigger: CGACCAGGCCGTATGCGACTGCTCGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 90 bp TCTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTaGGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTG +
Preference number: 6 (lower is better)
Translates to: SAEPGYGSRPPTLVG*AELGSQGSMSSSSL
Trigger: CAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS CAA 90 bp TCTGCAGAGCCTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTaGGCTAACCCACCTGAGCTCGGCTCACAGGGGTCAATGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SAEPGYGSRPPTLVG*ANPPELGSQGSMSS
Trigger: TGAGGACATTGACCCCTGTGAGCCGAGCTCAGGTGGGTTAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAGGCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS TCA 72 bp GTATGGTTCACGGCCACCTACTCTGGTGGGGTTGGCTaGGCTCGGCTCACAGGGGTCAATGTCCTCATCGTC +
Preference number: 6 (lower is better)
Translates to: VWFTATYSGGVG*ARLTGVNVLIV
Trigger: GACGATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS CCA 72 bp CTGGGTATGGTTCACGGCCACCTACTCTGGTGGGGTTaGCTGAGCTCGGCTCACAGGGGTCAATGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: LGMVHGHLLWWG*LSSAHRGQCPH
Trigger: ATGAGGACATTGACCCCTGTGAGCCGAGCTCAGCCAACCCCACCAGAGTAGGTGGCCGTGAACCATACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072671.14
ENSMUST00000172466.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS GCA 72 bp GACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTTaGCACGGAAGCCGGTCCTCGAGCAGTCGCATACGG +
Preference number: 6 (lower is better)
Translates to: DLPHCCLLGCSP*HGSRSSSSRIR
Trigger: CCGTATGCGACTGCTCGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp GGTGTGCCAGACCTTCCACATTGTTGTCTTCTTGGCTaGAGTCCTTGCCACGGAAGCCGGTCCTCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: GVPDLPHCCLLG*SPCHGSRSSSS
Trigger: ACTGCTCGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp CTTCTGGACAGTGCTAAATCCGATGGCCAGCCTGTCTaGTCGTGTACTGGGGCGGTCATTGGGAGGCCACTT +
Preference number: 6 (lower is better)
Translates to: LLDSAKSDGQPV*SCTGAVIGRPL
Trigger: AAGTGGCCTCCCAATGACCGCCCCAGTACACGAGCAGACAGGCTGGCCATCGGATTTAGCACTGTCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS CCA 72 bp AGCTCGGCTCACAGGGGTCAATGTCCTCATCGTCACTaGGACACTCTGCCGAGGCCACAAGGATGTCATCTG +
Preference number: 6 (lower is better)
Translates to: SSAHRGQCPHRH*DTLPRPQGCHL
Trigger: CAGATGACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGTGAGCCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
ENSMUST00000197268.5
CDS GCA 72 bp CGTAGCTCAAAACCGTTGCCTCTCTCTCACAGGACCTaGCGAGATAGCCTGTTCCGGAGCAATCGCAGACGT +
Preference number: 6 (lower is better)
Translates to: RSSKPLPLSHRT*RDSLFRSNRRR
Trigger: ACGTCTGCGATTGCTCCGGAACAGGCTATCTCGGCAGGTCCTGTGAGAGAGAGGCAACGGTTTTGAGCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp ACAGGGGTCAATGTCCTCATCGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTCATCTGTGGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: TGVNVLIVTGTL*RGHKDVICGLA
Trigger: AGCCAGACCACAGATGACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS GCA 72 bp ACAGGGGTCAATGTCCTCATCGTCACTGGGACACTCTaGCGAGGCCACAAGGATGTCATCTGTGGTCTGCGA +
Preference number: 6 (lower is better)
Translates to: TGVNVLIVTGTL*RGHKDVICGLR
Trigger: TCGCAGACCACAGATGACATCCTTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173917.8
ENSMUST00000197268.5
CDS CCA 72 bp CTAGAAGTGGTCGCCATCAGGATACCATATGCACGCTaGGATCGGAACCGCAAGGACACGTCCTCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: LEVVAIRIPYAR*DRNRKDTSSAS
Trigger: TGAGGCTGAGGACGTGTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTATCCTGATGGCGACCACTTCTAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CCA 72 bp GAGGAACTGTCCACACGCACCAACACGGCTTCCTTCTaGACAGTGCTAAATCCGATGGCCAGCCTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: EELSTRTNTASF*TVLNPMASLSA
Trigger: AGCAGACAGGCTGGCCATCGGATTTAGCACTGTCCAGAAGGAAGCCGTGTTGGTGCGTGTGGACAGTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000196559.5
CDS CAA 72 bp AGACCTTCCACATTGTTGTCTTCTTGGCTGCAGTCCTaGCCACGGAAGCCGGTCCTCGAGCAGTCGCATACG +
Preference number: 6 (lower is better)
Translates to: RPSTLLSSWLQS*PRKPVLEQSHT
Trigger: CGTATGCGACTGCTCGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp CATCAGGTGTGCCAGACCTTCCACATTGTTGTCTTCTaGGCTGCAGTCCTTGCCACGGAAGCCGGTCCTCGA +
Preference number: 6 (lower is better)
Translates to: HQVCQTFHIVVF*AAVLATEAGPR
Trigger: TCGAGGACCGGCTTCCGTGGCAAGGACTGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACCTGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 72 bp TCTCACCGGGAGCTGTGTAGGGAGTGCGTAGTGTGTTaGCAGAAATGGTACCTGACCGTCCATCCCGTTGGA +
Preference number: 6 (lower is better)
Translates to: SHRELCRECVVC*QKWYLTVHPVG
Trigger: TCCAACGGGATGGACGGTCAGGTACCATTTCTGTCAACACACTACGCACTCCCTACACAGCTCCCGGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 72 bp TTGGTGTATGTGCAGCTCCAGGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCACCAACACGGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LVYVQLQVVTQS*GTVHTHQHGFL
Trigger: AAGGAAGCCGTGTTGGTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTACCTGGAGCTGCACATACACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS GCA 72 bp AGAGTCTCTAGAAGTGGTCGCCATCAGGATACCATATaGACGCTGGGATCGGAACCGCAAGGACACGTCCTC +
Preference number: 6 (lower is better)
Translates to: RVSRSGRHQDTI*TLGSEPQGHVL
Trigger: GAGGACGTGTCCTTGCGGTTCCGATCCCAGCGTGCATATGGTATCCTGATGGCGACCACTTCTAGAGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp ATGGCCAGCCTGTCTGCTCGTGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTAATCTGTCCACCACCT +
Preference number: 6 (lower is better)
Translates to: MASLSARVLGRS*GGHLYVICPPP
Trigger: AGGTGGTGGACAGATTACATATAAGTGGCCTCCCAATGACCGCCCCAGTACACGAGCAGACAGGCTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS TCA 72 bp ACTTACTATGTGCAGCTCCAGGTAGTCACCCAGTCCTaGGGAACTGTCCACACGCACCAACACGGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: TYYVQLQVVTQS*GTVHTHQHGFL
Trigger: AAGGAAGCCGTGTTGGTGCGTGTGGACAGTTCCTCAGGACTGGGTGACTACCTGGAGCTGCACATAGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196559.5
CDS GCA 72 bp GATCGGAACCGCAAGGACACGTCCTCAGCCTCAGTGTaGATCACCACCGGAAGCTGGATTTTCATGAACATG +
Preference number: 6 (lower is better)
Translates to: DRNRKDTSSASV*ITTGSWIFMNM
Trigger: CATGTTCATGAAAATCCAGCTTCCGGTGGTGATGCACACTGAGGCTGAGGACGTGTCCTTGCGGTTCCGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp GGGCTGGCCCTGCTCTTTCCCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGTGAGCTGACGCCCTGC +
Preference number: 6 (lower is better)
Translates to: GLALLFPANYYG*LAIEDCELTPC
Trigger: GCAGGGCGTCAGCTCACAATCTTCAATAGCCAAGCAACCATAATAATTGGCGGGAAAGAGCAGGGCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000174331.8
ENSMUST00000197104.2
CDS CAA 72 bp GCAGGTTGTGCTGGGCCCTTCGCATCCTCTCTCAATTaGCCCATTGCAGAAGAGAGCATCCGAGATGAGATC +
Preference number: 6 (lower is better)
Translates to: AGCAGPFASSLN*PIAEESIRDEI
Trigger: GATCTCATCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGCGAAGGGCCCAGCACAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000196559.5
CDS TCA 72 bp CCTCAGTGTGCATCACCACCGGAAGCTGGATTTTCATaGACATGCTCCCGTCGTAGCTCAAAACCGTTGCCT +
Preference number: 6 (lower is better)
Translates to: PQCASPPEAGFS*TCSRRSSKPLP
Trigger: AGGCAACGGTTTTGAGCTACGACGGGAGCATGTTCATGAAAATCCAGCTTCCGGTGGTGATGCACACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp CAGGTTGTGCTGGGCCCTTCGCATCCTCTCTCAATTTaGCCATTGCAGAAGAGAGCATCCGAGATGAGATCT +
Preference number: 6 (lower is better)
Translates to: QVVLGPSHPLSI*PLQKRASEMRS
Trigger: AGATCTCATCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGCGAAGGGCCCAGCACAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000196559.5
CDS CCA 72 bp AAGGCACTTCACCGACCAGCCTCACATTCCCCACTATaGCGATGTTGGCATCGTTCTCTGCTGCCATATTCA +
Preference number: 6 (lower is better)
Translates to: KALHRPASHSPL*RCWHRSLLPYS
Trigger: TGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAATGTGAGGCTGGTCGGTGAAGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS CAA 72 bp TTGTTGGCGCTTTTAGCACTGCTGGGTTGCTTCTCCTaGACCACAGCCCCATTGGACTGTGCTGAGTTACTG +
Preference number: 6 (lower is better)
Translates to: LLALLALLGCFS*TTAPLDCAELL
Trigger: CAGTAACTCAGCACAGTCCAATGGGGCTGTGGTCAAGGAGAAGCAACCCAGCAGTGCTAAAAGCGCCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000173222.2
ENSMUST00000173917.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197268.5
CDS CAA 90 bp CTAAATCCGATGGCCAGCCTGTCTGCTCGTGTACTGGGGCGGTCATaGGGAGGCCACTTATATGTAATCTGTCCACCACCTTTGCTAAAG +
Preference number: 6 (lower is better)
Translates to: LNPMASLSARVLGRS*GGHLYVICPPPLLK
Trigger: CTTTAGCAAAGGTGGTGGACAGATTACATATAAGTGGCCTCCCAATGACCGCCCCAGTACACGAGCAGACAGGCTGGCCATCGGATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS CAA 90 bp GAAGGCACTTCACCGACCAGCCTCACATTCCCCACTATGGCGATGTaGGCATCGTTCTCTGCTGCCATATTCAGAACTTTCAAGCCATTG +
Preference number: 6 (lower is better)
Translates to: EGTSPTSLTFPTMAM*ASFSAAIFRTFKPL
Trigger: CAATGGCTTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAATGTGAGGCTGGTCGGTGAAGTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS CAA 90 bp GGGCGGTCATTGGGAGGCCACTTATATGTAATCTGTCCACCACCTTaGCTAAAGATATATGTTGTCCCAGCGTGTCCGCCTCGCAAGGAT +
Preference number: 6 (lower is better)
Translates to: GRSLGGHLYVICPPP*LKIYVVPACPPRKD
Trigger: ATCCTTGCGAGGCGGACACGCTGGGACAACATATATCTTTAGCAAAGGTGGTGGACAGATTACATATAAGTGGCCTCCCAATGACCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS TCA 72 bp AAACTCCAGCCTTGTATGATCACCTGCCATTTGGCCTaGCCGTCCATCCCGTTGGAAATCCACGTGATACCA +
Preference number: 6 (lower is better)
Translates to: KLQPCMITCHLA*PSIPLEIHVIP
Trigger: TGGTATCACGTGGATTTCCAACGGGATGGACGGTCAGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197224.2
CDS GCA 72 bp CGCCTTGATTTGAACATGAATCCTCTTGGCAGGTTGTaGTGGGCCCTTCGCATCCTCTCTCAATTTGCCCAT +
Preference number: 6 (lower is better)
Translates to: RLDLNMNPLGRL*WALRILSQFAH
Trigger: ATGGGCAAATTGAGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTCAAATCAAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000196559.5
CDS GCA 72 bp GGGCTGGCCCTGCTCTTTCCCGCCAATTATTATGGTTaGTTGGCTATTGAAGATTGTGAGCTGACGCCCTTT +
Preference number: 6 (lower is better)
Translates to: GLALLFPANYYG*LAIEDCELTPF
Trigger: AAAGGGCGTCAGCTCACAATCTTCAATAGCCAAGCAACCATAATAATTGGCGGGAAAGAGCAGGGCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS CCA 72 bp CACCGACCAGCCTCACATTCCCCACTATGGCGATGTTaGCATCGTTCTCTGCTGCCATATTCAGAACTTTCA +
Preference number: 6 (lower is better)
Translates to: HRPASHSPLWRC*HRSLLPYSELS
Trigger: TGAAAGTTCTGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAATGTGAGGCTGGTCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS CAA 90 bp GGGCGGTCATTGGGAGGCCACTTATATGTAATCTGTCCACCACCTTaGCTAAAGATATATGTTGTCCCAGGGTCATTGCAGAGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: GRSLGGHLYVICPPP*LKIYVVPGSLQSGP
Trigger: TGGCCCACTCTGCAATGACCCTGGGACAACATATATCTTTAGCAAAGGTGGTGGACAGATTACATATAAGTGGCCTCCCAATGACCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS GCA 72 bp GGTTGTGCTGGGCCCTTGCAAGTCAGCTTTCATCAATaGAACTTCGCATCCTCTCTCAATTTGCCCATTGCA +
Preference number: 6 (lower is better)
Translates to: GCAGPLQVSFHQ*NFASSLNLPIA
Trigger: TGCAATGGGCAAATTGAGAGAGGATGCGAAGTTGCATTGATGAAAGCTGACTTGCAAGGGCCCAGCACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176118.2
CDS CCA 72 bp AATCATCTGTGGGTGCTTGGCATCCTTCTGATGTCTTaGCTTGCCATGGCTAAACAGGATGAGGCCATTTGG +
Preference number: 6 (lower is better)
Translates to: NHLWVLGILLMS*LAMAKQDEAIW
Trigger: CCAAATGGCCTCATCCTGTTTAGCCATGGCAAGCCAAGACATCAGAAGGATGCCAAGCACCCACAGATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000197224.2
CDS CCA 72 bp CTTGATTTGAACATGAATCCTCTTGGCAGGTTGTGCTaGGCCCTTCGCATCCTCTCTCAATTTGCCCATTGC +
Preference number: 6 (lower is better)
Translates to: LDLNMNPLGRLC*ALRILSQFAHC
Trigger: GCAATGGGCAAATTGAGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTCAAATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000196559.5
CDS CAA 72 bp AAACGCCTTGATTTGAACATGAATCCTCTTGGCAGGTaGTGCTGGGCCCTTCGCATCCTCTCTCAATTTGCC +
Preference number: 6 (lower is better)
Translates to: KRLDLNMNPLGR*CWALRILSQFA
Trigger: GGCAAATTGAGAGAGGATGCGAAGGGCCCAGCACAACCTGCCAAGAGGATTCATGTTCAAATCAAGGCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000196559.5
CDS TCA 72 bp TCAACCTTAATCATCTGTGGGTGCTTGGCATCCTTCTaGTGTCTTGGCTTGCCATGGCTAAACAGGATGAGG +
Preference number: 6 (lower is better)
Translates to: STLIICGCLASF*CLGLPWLNRMR
Trigger: CCTCATCCTGTTTAGCCATGGCAAGCCAAGACATCAGAAGGATGCCAAGCACCCACAGATGATTAAGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000197224.2
CDS GCA 72 bp TCCTTTACTTTTACCTTGGTCGCCCATCATCAGGTGTaGCAGACCTTCCACATTGTTGTCTTCTTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SFTFTLVAHHQV*QTFHIVVFLAA
Trigger: TGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACCTGATGATGGGCGACCAAGGTAAAAGTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp ATACTCTTCTTTTCCTTGGTCGCCCATCATCAGGTGTaGCAGACCTTCCACATTGTTGTCTTCTTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: ILFFSLVAHHQV*QTFHIVVFLAA
Trigger: TGCAGCCAAGAAGACAACAATGTGGAAGGTCTGGCACACCTGATGATGGGCGACCAAGGAAAAGAAGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160800.9
CDS TCA 72 bp TCTCAATTTGCCCATTGCAGAAGAGAGCATCCGAGATaGGATCTGGAAGTCTGCCATTCAAGTCCACAGATG +
Preference number: 6 (lower is better)
Translates to: SQFAHCRREHPR*DLEVCHSSPQM
Trigger: CATCTGTGGACTTGAATGGCAGACTTCCAGATCTCATCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS CAA 72 bp TTGGGAGGCCACTTATATGTAATCTGTCCACCACCTTaGCTAAAGATATATGTTGTCCCAGCGTGTCCGCCT +
Preference number: 6 (lower is better)
Translates to: LGGHLYVICPPP*LKIYVVPACPP
Trigger: AGGCGGACACGCTGGGACAACATATATCTTTAGCAAAGGTGGTGGACAGATTACATATAAGTGGCCTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000159778.8
ENSMUST00000172466.8
ENSMUST00000174337.8
CDS GCA 72 bp CTCTATGTTATGAAACTCCAGCCTTGTATGATCACCTaGCATTTGGCCTGTCATGGCTTGTTGATCATCCAC +
Preference number: 6 (lower is better)
Translates to: LYVMKLQPCMIT*HLACHGLLIIH
Trigger: GTGGATGATCAACAAGCCATGACAGGCCAAATGGCAGGTGATCATACAAGGCTGGAGTTTCATAACATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS GCA 72 bp CACATTCCCCACTATGGCGATGTTGGCATCGTTCTCTaGTGCCATATTCAGAACTTTCAAGCCATTGTAGTA +
Preference number: 6 (lower is better)
Translates to: HIPHYGDVGIVL*CHIQNFQAIVV
Trigger: TACTACAATGGCTTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS GCA 72 bp GCTTTCATCAATGCAACTTCGCATCCTCTCTCAATTTaGCCATTGCAGAAGAGAGCATCCGAGATGAGATCT +
Preference number: 6 (lower is better)
Translates to: AFINATSHPLSI*PLQKRASEMRS
Trigger: AGATCTCATCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGCGAAGTTGCATTGATGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176118.2
CDS CCA 72 bp AGTCCACAGATGCCAGGCAACCTTGAAAGCCTTCTTTaGCATGGACCAGTTTTGGCAGGGATTTATATGTTT +
Preference number: 6 (lower is better)
Translates to: SPQMPGNLESLL*HGPVLAGIYMF
Trigger: AAACATATAAATCCCTGCCAAAACTGGTCCATGCCAAAGAAGGCTTTCAAGGTTGCCTGGCATCTGTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS CAA 72 bp AGCTTTCATCAATGCAACTTCGCATCCTCTCTCAATTaGCCCATTGCAGAAGAGAGCATCCGAGATGAGATC +
Preference number: 6 (lower is better)
Translates to: SFHQCNFASSLN*PIAEESIRDEI
Trigger: GATCTCATCTCGGATGCTCTCTTCTGCAATGGGCAAATTGAGAGAGGATGCGAAGTTGCATTGATGAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176118.2
CDS GCA 72 bp ATTCCCCACTATGGCGATGTTGGCATCGTTCTCTGCTaGCATATTCAGAACTTTCAAGCCATTGTAGTAAAG +
Preference number: 6 (lower is better)
Translates to: IPHYGDVGIVLC*HIQNFQAIVVK
Trigger: CTTTACTACAATGGCTTGAAAGTTCTGAATATGGCAGCAGAGAACGATGCCAACATCGCCATAGTGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
ENSMUST00000197104.2
CDS CAA 72 bp TTTTTATATACAACCTCTTTGAGACAGCCCATAAAGTaGTTACTGACTGGTGACCCTGGAAGGTCGGCTGTG +
Preference number: 6 (lower is better)
Translates to: FLYTTSLRQPIK*LLTGDPGRSAV
Trigger: CACAGCCGACCTTCCAGGGTCACCAGTCAGTAACAACTTTATGGGCTGTCTCAAAGAGGTTGTATATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS CAA 72 bp GTTGTGATTTTTGTGTCGATCTTTACTGTGTGGAGATaGCTGGTGTCCCGTGAAATCATCACATTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: VVIFVSIFTVWR*LVSREIITLCH
Trigger: GTGGCACAATGTGATGATTTCACGGGACACCAGCAATCTCCACACAGTAAAGATCGACACAAAAATCACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
CDS CAA 72 bp GTTTCTTTAGCCACTCCTCCAATATACAAGTCACTCTaGAGGTCTAGATTTCTGGCTCCCGCAGTGATTTGT +
Preference number: 6 (lower is better)
Translates to: VSLATPPIYKSL*RSRFLAPAVIC
Trigger: ACAAATCACTGCGGGAGCCAGAAATCTAGACCTCAAGAGTGACTTGTATATTGGAGGAGTGGCTAAAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
CDS CAA 72 bp TTGGGAGGCCACTTATATGTAATCTGTCCACCACCTTaGCTAAAGATATATGTTGTCCCAGGGTCATTGCAG +
Preference number: 6 (lower is better)
Translates to: LGGHLYVICPPP*LKIYVVPGSLQ
Trigger: CTGCAATGACCCTGGGACAACATATATCTTTAGCAAAGGTGGTGGACAGATTACATATAAGTGGCCTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
ENSMUST00000196559.5
CDS TCA 72 bp AGCTCCATTTTTCAATGCAAGATTGACATAATCAGCTaGTTTCCCTGTGTGAAGCATCAGTCCGTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: SSIFQCKIDIIS*FPCVKHQSVPL
Trigger: CAAAGGAACGGACTGATGCTTCACACAGGGAAATCAGCTGATTATGTCAATCTTGCATTGAAAAATGGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
CDS TCA 72 bp TTTGAGATAAGTCGTAGCAGAAGTATTCAGATCCCTTaGACGTGGCAATATACTCTTCTTTTCCTTGGTCGC +
Preference number: 6 (lower is better)
Translates to: FEISRSRSIQIP*TWQYTLLFLGR
Trigger: GCGACCAAGGAAAAGAAGAGTATATTGCCACGTTCAAGGGATCTGAATACTTCTGCTACGACTTATCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160800.9
CDS CCA 72 bp GTGGCATTGCCACCACTCCTTGTGAAACGTACTACATaGTATTTCCCATCATTAATGATTGCATTAGACTCT +
Preference number: 6 (lower is better)
Translates to: VALPPLLVKRTT*YFPSLMIALDS
Trigger: AGAGTCTAATGCAATCATTAATGATGGGAAATACCATGTAGTACGTTTCACAAGGAGTGGTGGCAATGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000159778.8
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000172466.8
ENSMUST00000174331.8
ENSMUST00000174337.8
CDS CAA 90 bp GATTTATATGTTTCTTTAGCCACTCCTCCAATATACAAGTCACTCTaGAGGTCTAGATTTCTGGCTCCCGCAGTGATTTGTGTTGTGATT +
Preference number: 6 (lower is better)
Translates to: DLYVSLATPPIYKSL*RSRFLAPAVICVVI
Trigger: AATCACAACACAAATCACTGCGGGAGCCAGAAATCTAGACCTCAAGAGTGACTTGTATATTGGAGGAGTGGCTAAAGAAACATATAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000176118.2
CDS CAA 72 bp TACCATTCTCCATCATTGACTTTCTTCTGCAGGGCTTaGATTTTTATAGTACCTGATCCCATGTCTAAGAGG +
Preference number: 6 (lower is better)
Translates to: YHSPSLTFFCRA*IFIVPDPMSKR
Trigger: CCTCTTAGACATGGGATCAGGTACTATAAAAATCAAAGCCCTGCAGAAGAAAGTCAATGATGGAGAATGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160800.9
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8
ENSMUST00000197224.2
CDS TCA 72 bp TTTGAGATAAGTCGTAGCAGAAGTATTCAGATCCCTTaGACGTGGCAATATACTCTTCTTTTCCTTTACTTT +
Preference number: 6 (lower is better)
Translates to: FEISRSRSIQIP*TWQYTLLFLYF
Trigger: AAAGTAAAGGAAAAGAAGAGTATATTGCCACGTTCAAGGGATCTGAATACTTCTGCTACGACTTATCTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000054059.15
ENSMUST00000072671.14
ENSMUST00000160844.10
ENSMUST00000161402.10
ENSMUST00000174331.8