Pregenerated sensors for NRSN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048978Ensembl transcript IDs: ENSMUST00000057866.13, ENSMUST00000167305.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAACATCAGAGCTTATTCAGTCTCAGAATGGAAAATTACATGGTaGAGAGAAAAGAGCTACACTGGAGGGATGACAGTGCAGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GNIRAYSVSEWKITW*REKSYTGGMTVQFW Trigger: CCAGAACTGCACTGTCATCCCTCCAGTGTAGCTCTTTTCTCTCCACCATGTAATTTTCCATTCTGAGACTGAATAAGCTCTGATGTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR TCA 90 bp | TACTCTGCTCAGTGCTTTCAAGTAACACAGAAAATGATACAACATTaGTACACCAGAGACACTAGTTCAAGAGGGGCTTGTGGAACCCAC | + |
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Preference number: 1 (lower is better) Translates to: YSAQCFQVTQKMIQH*YTRDTSSRGACGTH Trigger: GTGGGTTCCACAAGCCCCTCTTGAACTAGTGTCTCTGGTGTATCAATGTTGTATCATTTTCTGTGTTACTTGAAAGCACTGAGCAGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR TCA 90 bp | AATGGAAAATTACATGGTGGAGAGAAAAGAGCTACACTGGAGGGATaGCAGTGCAGTTCTGGTTGGGCCCATTCACATGTGTTATTTACT | + |
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Preference number: 1 (lower is better) Translates to: NGKLHGGEKRATLEG*QCSSGWAHSHVLFT Trigger: AGTAAATAACACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCTCCAGTGTAGCTCTTTTCTCTCCACCATGTAATTTTCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR TCA 90 bp | GAAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTaGGAGAATACCAGAGTCAGACTTTCCCTTCTCCTCTGCCTAATC | + |
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Preference number: 1 (lower is better) Translates to: EDYVYTQRQNSKEHS*ENTRVRLSLLLCLI Trigger: GATTAGGCAGAGGAGAAGGGAAAGTCTGACTCTGGTATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCACGTTGACGACTGGTAGGCTGGTCTACTCTGCTCAGTGCTTTCAAGTAAAACGAGGATGCATGTaGATCAGAGAGGGGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: WVTLTTGRLVYSAQCFQVKRGCM*IREGRP Trigger: AGGCCTCCCCTCTCTGATTCACATGCATCCTCGTTT...TACTTGAAAGCACTGAGCAGAGTAGACCAGCCTACCAGTCGTCAACGTGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATACCCCAACAGGAAACCATCACAAGATCCTCAGGAAAGAGACTCAGTGACGCATGTAAGTCTGCATaGCACCCTGTCCAGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TIPQQETITRSSGKRLSDACKSA*HPVQPH Trigger: GTGGGGCTGGACAGGGTGTCATGCAGACTTACATGC...GTCACTGAGTCTCTTTCCTGAGGATCTTGTGATGGTTTCCTGTTGGGGTATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR TCA 90 bp | TATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATACCAGAGTCAGCATGTAAGTCTGCATaGCACCCTGTCCAGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: YTHKDKTLRSTVERIPESACKSA*HPVQPH Trigger: GTGGGGCTGGACAGGGTGTCATGCAGACTTACATGC...TGACTCTGGTATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGACCATACCCCAACAGGAAACCATCACAAGATCCTCAGGAAAGAGACTCAGCTGGAGGAAACAAAATaGCTTACAAAGGACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: SDHTPTGNHHKILRKETQLEETK*LTKDTD Trigger: ATCAGTGTCCTTTGTAAGTCATTTTGTTTCCTCCAG...CTGAGTCTCTTTCCTGAGGATCTTGTGATGGTTTCCTGTTGGGGTATGGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGATGACAGTGCAGTTCTGGTTGGGCCCATTCACATGTGTTATTTACTGTTGCTTTCCCTTCTCCTCTaGCTAATCTACATTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RDDSAVLVGPIHMCYLLLLSLLL*LIYIFR Trigger: TCTGAAAATGTAGATTAGGCAGAGGAGAAGGGAAAG...CAACAGTAAATAACACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR-3UTR TCA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATAAAACGAGGATGCATGTaGATCAGAGAGGGGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: KTMYTHKDKTLRSTVERIKRGCM*IREGRP Trigger: AGGCCTCCCCTCTCTGATTCACATGCATCCTCGTTT...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR TCA 90 bp | TATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATACCAGAGTCAACATCCACTGTCACCTaGAGTGCATGTAAGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: YTHKDKTLRSTVERIPESTSTVT*SACKSA Trigger: TGCAGACTTACATGCACTTCAGGTGACAGTGGATGT...TGACTCTGGTATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGATGAAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTTCCCACTCTCATTGTTaGTACTGCCTTTACCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: VEMKTMYTHKDKTLRSTVSHSHC*YCLYQD Trigger: ATCTTGGTAAAGGCAGTATCAACAATGAGAGTGGGA...AACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTTCATCTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATACTGGAGGAAACAAAATaGCTTACAAAGGACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: KTMYTHKDKTLRSTVERILEETK*LTKDTD Trigger: ATCAGTGTCCTTTGTAAGTCATTTTGTTTCCTCCAG...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGATGAAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTACTGTTTTTAGATGCTaGCTAAATGTATACTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VEMKTMYTHKDKTLRSTVTVFRC*LNVYSH Trigger: GTGGGAGTATACATTTAGGCAGCATCTAAAAACAGT...AACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTTCATCTCAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR GCA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATAACTGTTTTTAGATGCTaGCTAAATGTATACTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: KTMYTHKDKTLRSTVERITVFRC*LNVYSH Trigger: GTGGGAGTATACATTTAGGCAGCATCTAAAAACAGT...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATATCTATAGAAACACATTaGCATCATCCAATCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: KTMYTHKDKTLRSTVERISIETH*HHPICL Trigger: CAAGCAGATTGGATGATGCCAATGTGTTTCTATAGA...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR TCA 72 bp | TTACATGGTGGAGAGAAAAGAGCTACACTGGAGGGATaGCAGTGCAGTTCTGGTTGGGCCCATTCACATGTG | + |
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Preference number: 3 (lower is better) Translates to: LHGGEKRATLEG*QCSSGWAHSHV Trigger: CACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCTCCAGTGTAGCTCTTTTCTCTCCACCATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR TCA 72 bp | AAAATAGCAGAGTTGGAGGTGCCAGGAGTCCAGTTCTaGCCATACCCCAACAGGAAACCATCACAAGATCCT | + |
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Preference number: 3 (lower is better) Translates to: KIAELEVPGVQF*PYPNRKPSQDP Trigger: AGGATCTTGTGATGGTTTCCTGTTGGGGTATGGTCAGAACTGGACTCCTGGCACCTCCAACTCTGCTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR CCA 72 bp | ATGGAAAATTACATGGTGGAGAGAAAAGAGCTACACTaGAGGGATGACAGTGCAGTTCTGGTTGGGCCCATT | + |
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Preference number: 3 (lower is better) Translates to: MENYMVERKELH*RDDSAVLVGPI Trigger: AATGGGCCCAACCAGAACTGCACTGTCATCCCTCCAGTGTAGCTCTTTTCTCTCCACCATGTAATTTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR-3UTR CAA 90 bp | AGGGATGACAGTGCAGTTCTGGTTGGGCCCATTCACATGTGTTATTTACTGTTGCTCCCACTCTCATTGTaGATACTGCCTTTACCAAGA | + |
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Preference number: 3 (lower is better) Translates to: RDDSAVLVGPIHMCYLLLLPLSL*ILPLPR Trigger: TCTTGGTAAAGGCAGTATCAACAATGAGAGTGGGAG...CAACAGTAAATAACACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR-3UTR CAA 90 bp | TACACTGGAGGGATGACAGTGCAGTTCTGGTTGGGCCCATTCACATGTGTTATTAAATGCTTTTTAAGGTaGACACCACCTTGGGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: YTGGMTVQFWLGPFTCVIKCFLR*TPPWGF Trigger: GAAACCCCAAGGTGGTGTCAACCTTAAAAAGCATTT...AATAACACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCTCCAGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR-3UTR CAA 90 bp | TACATGGTGGAGAGAAAAGAGCTACACTGGAGGGATGACAGTGCAGTTCTGGTTCTCTATAGAAACACATaGGCATCATCCAATCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: YMVERKELHWRDDSAVLVLYRNT*ASSNLL Trigger: AAGCAGATTGGATGATGCCAATGTGTTTCTATAGAG...AACCAGAACTGCACTGTCATCCCTCCAGTGTAGCTCTTTTCTCTCCACCATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR TCA 72 bp | ATCCAATCTGCTTGGTTGGGTATTTTGGGTAAATACTaGAAAATAGCAGAGTTGGAGGTGCCAGGAGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: IQSAWLGILGKY*KIAELEVPGVQ Trigger: CTGGACTCCTGGCACCTCCAACTCTGCTATTTTTCAGTATTTACCCAAAATACCCAACCAAGCAGATTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR TCA 72 bp | GTATACACACAAAGACAAAACTCTAAGGAGCACAGTTaGGAGAATACCAGAGTCAGACTTTCCCTTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VYTQRQNSKEHS*ENTRVRLSLLL Trigger: GAGGAGAAGGGAAAGTCTGACTCTGGTATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR CCA 72 bp | AGAGCTTATTCAGTCTCAGAATGGAAAATTACATGGTaGAGAGAAAAGAGCTACACTGGAGGGATGACAGTG | + |
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Preference number: 3 (lower is better) Translates to: RAYSVSEWKITW*REKSYTGGMTV Trigger: CACTGTCATCCCTCCAGTGTAGCTCTTTTCTCTCCACCATGTAATTTTCCATTCTGAGACTGAATAAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| 3UTR TCA 72 bp | AGATGCTGCCTAAATGTATACTCCCACTCTCATTGTTaGTACTGCCTTTACCAAGATTCCAAAACTGGCGAT | + |
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Preference number: 3 (lower is better) Translates to: RCCLNVYSHSHC*YCLYQDSKTGD Trigger: ATCGCCAGTTTTGGAATCTTGGTAAAGGCAGTATCAACAATGAGAGTGGGAGTATACATTTAGGCAGCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR CCA 72 bp | TTTGAGAATAGCATACTCGTCTCTATAGAAACACATTaGCATCATCCAATCTGCTTGGTTGGGTATTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: FENSILVSIETH*HHPICLVGYFG Trigger: CCCAAAATACCCAACCAAGCAGATTGGATGATGCCAATGTGTTTCTATAGAGACGAGTATGCTATTCTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR CAA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATACTCCCACTCTCATTGTaGATACTGCCTTTACCAAGA | + |
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Preference number: 3 (lower is better) Translates to: KTMYTHKDKTLRSTVERILPLSL*ILPLPR Trigger: TCTTGGTAAAGGCAGTATCAACAATGAGAGTGGGAG...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR CAA 90 bp | TATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATACCAGAGTCACTCTATAGAAACACATaGGCATCATCCAATCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: YTHKDKTLRSTVERIPESLYRNT*ASSNLL Trigger: AAGCAGATTGGATGATGCCAATGTGTTTCTATAGAG...TGACTCTGGTATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGAGATGAAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTATCCAATCTGCTTGGTaGGGTATTTTGGGTAAATAC | + |
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Preference number: 3 (lower is better) Translates to: VEMKTMYTHKDKTLRSTVIQSAW*GILGKY Trigger: GTATTTACCCAAAATACCCAACCAAGCAGATTGGAT...AACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTTCATCTCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGAGATGAAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTCTTGGGGTTTCTTATTaGAGAATAGCATACTCGTCT | + |
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Preference number: 3 (lower is better) Translates to: VEMKTMYTHKDKTLRSTVLGVSY*RIAYSS Trigger: AGACGAGTATGCTATTCTCAAATAAGAAACCCCAAG...AACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTTCATCTCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | GAAATAGGCATGGAAGACAGCACCACACGGAGGGATCAGAAAAACCTATTAGAGCAGCCTGGGCTCGCCTaGACCCACAGGTGTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EIGMEDSTTRRDQKNLLEQPGLA*THRCCC Trigger: GCAGCAACACCTGTGGGTCCAGGCGAGCCCAGGCTG...CTCTAATAGGTTTTTCTGATCCCTCCGTGTGGTGCTGTCTTCCATGCCTATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR GCA 90 bp | GAAATAGGCATGGAAGACAGCACCACACGGAGGGATCAGAAAAACCTATTAGAGTGGATGTACCCCCGATaGAGAAGAGCACAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: EIGMEDSTTRRDQKNLLEWMYPR*RRAQPP Trigger: CGGGGGCTGTGCTCTTCTGCATCGGGGGTACATCCA...CTCTAATAGGTTTTTCTGATCCCTCCGTGTGGTGCTGTCTTCCATGCCTATTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR TCA 90 bp | TGGGTCACGTTGACGACTGGTAGGCTGGTCTACTCTGCTCAGTGCTTTCAAGTAGTGTGTCCACCACCATaGAATCAGCTTCGCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: WVTLTTGRLVYSAQCFQVVCPPP*NQLRQK Trigger: CTTTTGGCGAAGCTGATTTCATGGTGGTGGACACAC...TACTTGAAAGCACTGAGCAGAGTAGACCAGCCTACCAGTCGTCAACGTGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR TCA 90 bp | TACACTGGAGGGATGACAGTGCAGTTCTGGTTGGGCCCATTCACATGTGTTATTGACCTTCCAGAATACTaGGCTCCACCTGTTAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: YTGGMTVQFWLGPFTCVIDLPEY*APPVRR Trigger: TCGCCTAACAGGTGGAGCTCAGTATTCTGGAAGGTC...AATAACACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCTCCAGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| CDS-3UTR TCA 90 bp | ACCATACCCCAACAGGAAACCATCACAAGATCCTCAGGAAAGAGACTCAGTGACGACCTTCCAGAATACTaGGCTCCACCTGTTAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: TIPQQETITRSSGKRLSDDLPEY*APPVRR Trigger: TCGCCTAACAGGTGGAGCTCAGTATTCTGGAAGGTC...GTCACTGAGTCTCTTTCCTGAGGATCTTGTGATGGTTTCCTGTTGGGGTATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | TCTGACCATACCCCAACAGGAAACCATCACAAGATCCTCAGGAAAGAGACTCAGGATCTTGGTGTCCCCTaGGCCTGGAGCTTTAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: SDHTPTGNHHKILRKETQDLGVP*AWSFSD Trigger: ATCACTAAAGCTCCAGGCCCAGGGGACACCAAGATC...CTGAGTCTCTTTCCTGAGGATCTTGTGATGGTTTCCTGTTGGGGTATGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR TCA 90 bp | TCTGACCATACCCCAACAGGAAACCATCACAAGATCCTCAGGAAAGAGACTCAGAGACAGTGCCTGAGATaGGTCCGACCTTCCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: SDHTPTGNHHKILRKETQRQCLR*VRPSRI Trigger: TATTCTGGAAGGTCGGACTCATCTCAGGCACTGTCT...CTGAGTCTCTTTCCTGAGGATCTTGTGATGGTTTCCTGTTGGGGTATGGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | GTTGAGATGAAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTCAGCCTGGGCTCGCCTaGACCCACAGGTGTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VEMKTMYTHKDKTLRSTVQPGLA*THRCCC Trigger: GCAGCAACACCTGTGGGTCCAGGCGAGCCCAGGCTG...AACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTTCATCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | TGGGTCACGTTGACGACTGGTAGGCTGGTCTACTCTGCTCAGTGCTTTCAAGTACTGTTAGGCGATCTCTaGATCTGGAAATCATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: WVTLTTGRLVYSAQCFQVLLGDL*IWKSSS Trigger: TGAGGATGATTTCCAGATCCAGAGATCGCCTAACAG...TACTTGAAAGCACTGAGCAGAGTAGACCAGCCTACCAGTCGTCAACGTGACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | AGGGATGACAGTGCAGTTCTGGTTGGGCCCATTCACATGTGTTATTTACTGTTGGATCTTGGTGTCCCCTaGGCCTGGAGCTTTAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RDDSAVLVGPIHMCYLLLDLGVP*AWSFSD Trigger: ATCACTAAAGCTCCAGGCCCAGGGGACACCAAGATC...CAACAGTAAATAACACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| CDS-3UTR CCA 90 bp | TCTGACCATACCCCAACAGGAAACCATCACAAGATCCTCAGGAAAGAGACTCAGGGCGATCTCTGGATCTaGAAATCATCCTCATACTCC | + |
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Preference number: 4 (lower is better) Translates to: SDHTPTGNHHKILRKETQGDLWI*KSSSYS Trigger: GGAGTATGAGGATGATTTCCAGATCCAGAGATCGCC...CTGAGTCTCTTTCCTGAGGATCTTGTGATGGTTTCCTGTTGGGGTATGGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR TCA 90 bp | GAAATAGGCATGGAAGACAGCACCACACGGAGGGATCAGAAAAACCTATTAGAGAGAGGCTGCACATTCTaGACTCTGGACAAAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: EIGMEDSTTRRDQKNLLERGCTF*TLDKVT Trigger: TGTCACTTTGTCCAGAGTTCAGAATGTGCAGCCTCT...CTCTAATAGGTTTTTCTGATCCCTCCGTGTGGTGCTGTCTTCCATGCCTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR GCA 90 bp | GTTAAAAGTCTAACATCTGGATCAAAATCAGGGAACTGCAATTCTAGGAACACATGGATGTACCCCCGATaGAGAAGAGCACAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: VKSLTSGSKSGNCNSRNTWMYPR*RRAQPP Trigger: CGGGGGCTGTGCTCTTCTGCATCGGGGGTACATCCA...TGTGTTCCTAGAATTGCAGTTCCCTGATTTTGATCCAGATGTTAGACTTTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | GAAATAGGCATGGAAGACAGCACCACACGGAGGGATCAGAAAAACCTATTAGAGGGCGATCTCTGGATCTaGAAATCATCCTCATACTCC | + |
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Preference number: 4 (lower is better) Translates to: EIGMEDSTTRRDQKNLLEGDLWI*KSSSYS Trigger: GGAGTATGAGGATGATTTCCAGATCCAGAGATCGCC...CTCTAATAGGTTTTTCTGATCCCTCCGTGTGGTGCTGTCTTCCATGCCTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | GTTGAGATGAAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGTAGGCACCCTGCCATaGATGTACCCCCGATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VEMKTMYTHKDKTLRSTVVGTLP*MYPRCR Trigger: TCTGCATCGGGGGTACATCCATGGCAGGGTGCCTAC...AACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTTCATCTCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | GTTAAAAGTCTAACATCTGGATCAAAATCAGGGAACTGCAATTCTAGGAACACAGTAGGCACCCTGCCATaGATGTACCCCCGATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VKSLTSGSKSGNCNSRNTVGTLP*MYPRCR Trigger: TCTGCATCGGGGGTACATCCATGGCAGGGTGCCTAC...TGTGTTCCTAGAATTGCAGTTCCCTGATTTTGATCCAGATGTTAGACTTTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR TCA 90 bp | GTTAAAAGTCTAACATCTGGATCAAAATCAGGGAACTGCAATTCTAGGAACACACACAAAGACAGTGCCTaGGATGAGTCCGACCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VKSLTSGSKSGNCNSRNTHKDSA*DESDLP Trigger: TGGAAGGTCGGACTCATCTCAGGCACTGTCTTTGTG...TGTGTTCCTAGAATTGCAGTTCCCTGATTTTGATCCAGATGTTAGACTTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR GCA 90 bp | ACCATACCCCAACAGGAAACCATCACAAGATCCTCAGGAAAGAGACTCAGTGACATGGGCTTTAATGTCTaGGATTCGCTCTTTAAACTT | + |
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Preference number: 4 (lower is better) Translates to: TIPQQETITRSSGKRLSDMGFNV*DSLFKL Trigger: AAGTTTAAAGAGCGAATCGCAGACATTAAAGCCCAT...GTCACTGAGTCTCTTTCCTGAGGATCTTGTGATGGTTTCCTGTTGGGGTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR GCA 90 bp | AGGGATGACAGTGCAGTTCTGGTTGGGCCCATTCACATGTGTTATTTACTGTTGATGGGCTTTAATGTCTaGGATTCGCTCTTTAAACTT | + |
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Preference number: 4 (lower is better) Translates to: RDDSAVLVGPIHMCYLLLMGFNV*DSLFKL Trigger: AAGTTTAAAGAGCGAATCGCAGACATTAAAGCCCAT...CAACAGTAAATAACACATGTGAATGGGCCCAACCAGAACTGCACTGTCATCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057866.13 |
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| CDS-3UTR TCA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATAAGACAGTGCCTGAGATaGGTCCGACCTTCCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: KTMYTHKDKTLRSTVERIRQCLR*VRPSRI Trigger: TATTCTGGAAGGTCGGACTCATCTCAGGCACTGTCT...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | TATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATACCAGAGTCAGCTTTAGTGATGGGCTaGGTATGGGCTTTAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: YTHKDKTLRSTVERIPESALVMG*VWALMS Trigger: AGACATTAAAGCCCATACCCAGCCCATCACTAAAGC...TGACTCTGGTATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR TCA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATAAGAGGCTGCACATTCTaGACTCTGGACAAAGTGACA | + |
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Preference number: 4 (lower is better) Translates to: KTMYTHKDKTLRSTVERIRGCTF*TLDKVT Trigger: TGTCACTTTGTCCAGAGTTCAGAATGTGCAGCCTCT...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | GTTAAAAGTCTAACATCTGGATCAAAATCAGGGAACTGCAATTCTAGGAACACAGCTTTAGTGATGGGCTaGGTATGGGCTTTAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: VKSLTSGSKSGNCNSRNTALVMG*VWALMS Trigger: AGACATTAAAGCCCATACCCAGCCCATCACTAAAGC...TGTGTTCCTAGAATTGCAGTTCCCTGATTTTGATCCAGATGTTAGACTTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CCA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATACTTTGGAATAGCTCTTaGCAAACACAGACATCAGTA | + |
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Preference number: 4 (lower is better) Translates to: KTMYTHKDKTLRSTVERILWNSS*QTQTSV Trigger: TACTGATGTCTGTGTTTGCCAAGAGCTATTCCAAAG...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS GCA 90 bp | CAAACACAGACATCAGTAGGCACCCTGCCATGGATGTACCCCCGATaGAGAAGAGCACAGCCCCCGCCAGCTTGCATGTGTCCAGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: QTQTSVGTLPWMYPR*RRAQPPPACMCPGR Trigger: GCGCCCTGGACACATGCAAGCTGGCGGGGGCTGTGCTCTTCTGCATCGGGGGTACATCCATGGCAGGGTGCCTACTGATGTCTGTGTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS GCA 90 bp | CCATGGATGTACCCCCGATGCAGAAGAGCACAGCCCCCGCCAGCTTaGATGTGTCCAGGGCGCCGTTGTACTTCACAGCATGTGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PWMYPRCRRAQPPPA*MCPGRRCTSQHVCP Trigger: TGGACACACATGCTGTGAAGTACAACGGCGCCCTGGACACATGCAAGCTGGCGGGGGCTGTGCTCTTCTGCATCGGGGGTACATCCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CCA 90 bp | TGGAATAGCTCTTGGCAAACACAGACATCAGTAGGCACCCTGCCATaGATGTACCCCCGATGCAGAAGAGCACAGCCCCCGCCAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: WNSSWQTQTSVGTLP*MYPRCRRAQPPPAC Trigger: GCAAGCTGGCGGGGGCTGTGCTCTTCTGCATCGGGGGTACATCCATGGCAGGGTGCCTACTGATGTCTGTGTTTGCCAAGAGCTATTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CCA 90 bp | ACAGGGATCTTGGTGTCCCCTGGGCCTGGAGCTTTAGTGATGGGCTaGGTATGGGCTTTAATGTCTGCGATTCGCTCTTTAAACTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TGILVSPGPGALVMG*VWALMSAIRSLNFC Trigger: ACAGAAGTTTAAAGAGCGAATCGCAGACATTAAAGCCCATACCCAGCCCATCACTAAAGCTCCAGGCCCAGGGGACACCAAGATCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CAA 90 bp | GAAATAGGCATGGAAGACAGCACCACACGGAGGGATCAGAAAAACCTATTAGAGAAAGTGACAGGGATCTaGGTGTCCCCTGGGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: EIGMEDSTTRRDQKNLLEKVTGI*VSPGPG Trigger: TCCAGGCCCAGGGGACACCAAGATCCCTGTCACTTT...CTCTAATAGGTTTTTCTGATCCCTCCGTGTGGTGCTGTCTTCCATGCCTATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CCA 90 bp | ACCTTCCAGAATACTGAGCTCCACCTGTTAGGCGATCTCTGGATCTaGAAATCATCCTCATACTCCCAGATAGAGGCAGTGCAGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: TFQNTELHLLGDLWI*KSSSYSQIEAVQSS Trigger: TGAGGACTGCACTGCCTCTATCTGGGAGTATGAGGATGATTTCCAGATCCAGAGATCGCCTAACAGGTGGAGCTCAGTATTCTGGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS-3UTR CAA 90 bp | AAGACTATGTATACACACAAAGACAAAACTCTAAGGAGCACAGTTGAGAGAATAAAAGTGACAGGGATCTaGGTGTCCCCTGGGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: KTMYTHKDKTLRSTVERIKVTGI*VSPGPG Trigger: TCCAGGCCCAGGGGACACCAAGATCCCTGTCACTTT...TATTCTCTCAACTGTGCTCCTTAGAGTTTTGTCTTTGTGTGTATACATAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CAA 72 bp | GTACCCCCGATGCAGAAGAGCACAGCCCCCGCCAGCTaGCATGTGTCCAGGGCGCCGTTGTACTTCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPPMQKSTAPAS*HVSRAPLYFTA Trigger: TGCTGTGAAGTACAACGGCGCCCTGGACACATGCAAGCTGGCGGGGGCTGTGCTCTTCTGCATCGGGGGTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CAA 90 bp | GCCATGGATGTACCCCCGATGCAGAAGAGCACAGCCCCCGCCAGCTaGCATGTGTCCAGGGCGCCGTTGTACTTCACAGCATGTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AMDVPPMQKSTAPAS*HVSRAPLYFTACVS Trigger: GGACACACATGCTGTGAAGTACAACGGCGCCCTGGACACATGCAAGCTGGCGGGGGCTGTGCTCTTCTGCATCGGGGGTACATCCATGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS GCA 72 bp | TACCCCCGATGCAGAAGAGCACAGCCCCCGCCAGCTTaGATGTGTCCAGGGCGCCGTTGTACTTCACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: YPRCRRAQPPPA*MCPGRRCTSQH Trigger: ATGCTGTGAAGTACAACGGCGCCCTGGACACATGCAAGCTGGCGGGGGCTGTGCTCTTCTGCATCGGGGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS GCA 72 bp | ACATCAGTAGGCACCCTGCCATGGATGTACCCCCGATaGAGAAGAGCACAGCCCCCGCCAGCTTGCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: TSVGTLPWMYPR*RRAQPPPACMC Trigger: ACACATGCAAGCTGGCGGGGGCTGTGCTCTTCTGCATCGGGGGTACATCCATGGCAGGGTGCCTACTGATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CAA 90 bp | CAGAAGAGCACAGCCCCCGCCAGCTTGCATGTGTCCAGGGCGCCGTaGTACTTCACAGCATGTGTGTCCACCACCATGAAATCAGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: QKSTAPASLHVSRAP*YFTACVSTTMKSAS Trigger: CGAAGCTGATTTCATGGTGGTGGACACACATGCTGTGAAGTACAACGGCGCCCTGGACACATGCAAGCTGGCGGGGGCTGTGCTCTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CAA 72 bp | ACAGCCCCCGCCAGCTTGCATGTGTCCAGGGCGCCGTaGTACTTCACAGCATGTGTGTCCACCACCATGAAA | + |
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Preference number: 6 (lower is better) Translates to: TAPASLHVSRAP*YFTACVSTTMK Trigger: TTTCATGGTGGTGGACACACATGCTGTGAAGTACAACGGCGCCCTGGACACATGCAAGCTGGCGGGGGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CCA 72 bp | TTGGTGTCCCCTGGGCCTGGAGCTTTAGTGATGGGCTaGGTATGGGCTTTAATGTCTGCGATTCGCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LVSPGPGALVMG*VWALMSAIRSL Trigger: TAAAGAGCGAATCGCAGACATTAAAGCCCATACCCAGCCCATCACTAAAGCTCCAGGCCCAGGGGACACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS TCA 72 bp | CGCCGTTGTACTTCACAGCATGTGTGTCCACCACCATaGAATCAGCTTCGCCAAAAGCTTCGATTTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRCTSQHVCPPP*NQLRQKLRFWG Trigger: CCCCCAAAATCGAAGCTTTTGGCGAAGCTGATTTCATGGTGGTGGACACACATGCTGTGAAGTACAACGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CCA 72 bp | AATACTGAGCTCCACCTGTTAGGCGATCTCTGGATCTaGAAATCATCCTCATACTCCCAGATAGAGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: NTELHLLGDLWI*KSSSYSQIEAV Trigger: CACTGCCTCTATCTGGGAGTATGAGGATGATTTCCAGATCCAGAGATCGCCTAACAGGTGGAGCTCAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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| CDS CCA 72 bp | TTCCAGAATACTGAGCTCCACCTGTTAGGCGATCTCTaGATCTGGAAATCATCCTCATACTCCCAGATAGAG | + |
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Preference number: 6 (lower is better) Translates to: FQNTELHLLGDL*IWKSSSYSQIE Trigger: CTCTATCTGGGAGTATGAGGATGATTTCCAGATCCAGAGATCGCCTAACAGGTGGAGCTCAGTATTCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057866.13 ENSMUST00000167305.2 |
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