Pregenerated sensors for NRN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039114Ensembl transcript IDs: ENSMUST00000037623.15, ENSMUST00000122286.2, ENSMUST00000223611.2, ENSMUST00000224323.2, ENSMUST00000224960.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCGGCTGATTCCCACGTGGACACCACTCTTGAAGTCATTCCCCTaGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: HRLIPTWTPLLKSFP*PSPFPSRFPIRRSP Trigger: TGGGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR CCA 90 bp | TGGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATTCCCACGTaGACACCACTCTTGAAGTCATTCCCCTGGCCTTCTCCTTTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: WKKDVSMIIHRLIPT*TPLLKSFPWPSPFP Trigger: GGGAAAAGGAGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR CCA 90 bp | TCTGGAGGAGAAATGTGCAGTGGAAATGATCAAAACAAGGTACTGTaGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATTCCCACG | + |
|
Preference number: 1 (lower is better) Translates to: SGGEMCSGNDQNKVL*KKDVSMIIHRLIPT Trigger: CGTGGGAATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAGTACCTTGTTTTGATCATTTCCACTGCACATTTCTCCTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGTGGACCTGAACGAGGGGCATCGACAATAGCAGGTGAAACCGGCCCCTCATGCTCGCTCGCTCACTaGTCGGTAACATTTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSGPERGASTIAGETGPSCSLAH*SVTFGK Trigger: TTTGCCAAATGTTACCGATCAGTGAGCGAGCGAGCA...TGAGGGGCCGGTTTCACCTGCTATTGTCGATGCCCCTCGTTCAGGTCCACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR CAA 90 bp | GTGAGCATGATTATTCACCGGCTGATTCCCACGTGGACACCACTCTaGAAGTCATTCCCCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VSMIIHRLIPTWTPL*KSFPWPSPFPSRFP Trigger: GGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCCATCATTCTTGCTCGCTCGCTCACTaGTCGGTAACATTTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PGLLLFPLAFPLGGAHHSCSLAH*SVTFGK Trigger: TTTGCCAAATGTTACCGATCAGTGAGCGAGCGAGCA...AGAATGATGGGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATTCCCCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCGCCCAGGGCCATTCCTaGGATTCTTTTGCCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: SHSPGLLLFPLAFPLGGAAQGHS*DSFAKI Trigger: TATTTTGGCAAAAGAATCTCAGGAATGGCCCTGGGC...GGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGTGGACCTGAACGAGGGGCATCGACAATAGCAGGTGAAACCGGCCCCTCAAATGTGCAGTGGAAATaGTCAAAACAAGGTACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GSGPERGASTIAGETGPSNVQWK*SKQGTV Trigger: CACAGTACCTTGTTTTGATCATTTCCACTGCACATT...TGAGGGGCCGGTTTCACCTGCTATTGTCGATGCCCCTCGTTCAGGTCCACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR CCA 90 bp | GACCGGTCCTCCAGTGCATGTAGTAAAGGCCTTGCTCTTAATTTGAAAACGACCTTCCCCCAAGAATTCTaGAACCTCGGCGGAGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DRSSSACSKGLALNLKTTFPQEF*NLGGGN Trigger: GTTTCCTCCGCCGAGGTTCCAGAATTCTTGGGGGAA...GGTCGTTTTCAAATTAAGAGCAAGGCCTTTACTACATGCACTGGAGGACCGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224323.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGCATGATTATTCACCGGCTGATTCCCACGTGGACACCACTCTTGAAGTCATTAGACGGACTAAAAGGTaGGGTCCGATTTTGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EHDYSPADSHVDTTLEVIRRTKR*GPILAV Trigger: CACAGCCAAAATCGGACCTCACCTTTTAGTCCGTCT...AATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGCATGATTATTCACCGGCTGATTCCCACGTGGACACCACTCTTGAAGTCATTGCCCAGGGCCATTCCTaGGATTCTTTTGCCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: EHDYSPADSHVDTTLEVIAQGHS*DSFAKI Trigger: TATTTTGGCAAAAGAATCTCAGGAATGGCCCTGGGC...AATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTGGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATTCCCACGTGGACTCCTCAGAGAACGAATaGCTATTCCTCTCGATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TVEERREHDYSPADSHVDSSENE*LFLSIS Trigger: GGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGA...GTCCACGTGGGAATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCATGATTATTCACCGGCTGATTCCCACGTGGACACCACTCTTGAAGTCATTTCCTCAGAGAACGAATaGCTATTCCTCTCGATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: EHDYSPADSHVDTTLEVISSENE*LFLSIS Trigger: GGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGA...AATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAACAAGGTACTGTGGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATTTGAAGTCATTCCCCTaGCCTTCTCCTTTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKQGTVEERREHDYSPADLKSFP*PSPFPS Trigger: AGAGGGAAAAGGAGAAGGCCAGGGGAATGACTTCAA...ATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAGTACCTTGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAACAAGGTACTGTGGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATTCCTCAGAGAACGAATaGCTATTCCTCTCGATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SKQGTVEERREHDYSPADSSENE*LFLSIS Trigger: GGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGA...ATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAGTACCTTGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAATCCTCAGAGAACGAATaGCTATTCCTCTCGATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TGFPTIPYECFQHHRESQSSENE*LFLSIS Trigger: GGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGA...TTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR CCA 72 bp | ATTCCCACGTGGACACCACTCTTGAAGTCATTCCCCTaGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: IPTWTPLLKSFP*PSPFPSRFPIR Trigger: CCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR CCA 72 bp | GACGTGAGCATGATTATTCACCGGCTGATTCCCACGTaGACACCACTCTTGAAGTCATTCCCCTGGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DVSMIIHRLIPT*TPLLKSFPWPS Trigger: AGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTCACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| 3UTR CCA 72 bp | GAAATGTGCAGTGGAAATGATCAAAACAAGGTACTGTaGAAGAAAGACGTGAGCATGATTATTCACCGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EMCSGNDQNKVL*KKDVSMIIHRL Trigger: CAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAGTACCTTGTTTTGATCATTTCCACTGCACATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTGATTCCCACGTGGACACCACTCTTGAAGTCATTCCCCTGGCCTTCTCCTACCCCGCCGCCCCGTTaGTGCTGCCGCAGAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLIPTWTPLLKSFPWPSPTPPPR*CCRRVR Trigger: TCGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGT...AGGAGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTGAGTGTGGGACCCCGCCGCCCCGTTaGTGCTGCCGCAGAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRTNGYSSRFPGAWCECGTPPPR*CCRRVR Trigger: TCGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGT...CCCACACTCACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTGATTCCCACGTGGACACCACTCTTGAAGTCATTCCCCTGGCCTTCTCCTCCGCCCCGTTGCTGCTaGCGCAGAGTTCGAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIPTWTPLLKSFPWPSPPPRCC*RRVRIS Trigger: GCTTATTCGAACTCTGCGGCAGCAGCAACGGGGCGG...AGGAGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | AGTCATTCCCCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCCCGCCGCCCCGTTGCTaGTGCCGCAGAGTTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SHSPGLLLFPLAFPLGGAPPPRC*CRRVRI Trigger: TATTCGAACTCTGCGGCAGCAGCAACGGGGCGGCGG...GGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTGAGTGTGGGGGCCCTGCGGGTAGTTaGCCATGCTGTCGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRTNGYSSRFPGAWCECGGPAGS*PCCRPA Trigger: AGCTGGGCGACAGCATGGCCAACTACCCGCAGGGCC...CCCACACTCACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | AGTCATTCCCCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCCCGCCCCGTTGCTGCTaGCGCAGAGTTCGAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSPGLLLFPLAFPLGGAPPRCC*RRVRIS Trigger: GCTTATTCGAACTCTGCGGCAGCAGCAACGGGGCGG...GGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGCATGATTATTCACCGGCTGATTCCCACGTGGACACCACTCTTGAAGTCAACCCCGCCGCCCCGTTaGTGCTGCCGCAGAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSMIIHRLIPTWTPLLKSTPPPR*CCRRVR Trigger: TCGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGT...TGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | CAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTCCGCCGCCCCGTTGCTaGTGCCGCAGAGTTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: QRPQRTNGYSSRFPGAWCPPPRC*CRRVRI Trigger: TATTCGAACTCTGCGGCAGCAGCAACGGGGCGGCGG...ACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | CAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTATCACACTTGCCCGCTaGTCTCACGGCCTGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRPQRTNGYSSRFPGAWCITLAR*SHGLHQ Trigger: CTGGTGCAGGCCGTGAGAGCAGCGGGCAAGTGTGAT...ACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | ATCACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGCCGCCGCCCCGTTGCTaGTGCCGCAGAGTTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ITTSSENEWLFLSISGSMPPPRC*CRRVRI Trigger: TATTCGAACTCTGCGGCAGCAGCAACGGGGCGGCGG...CATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | AATCACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGCCCTGCGGGTAGTTaGCCATGCTGTCGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NHNVLRERMAIPLDFREHGPAGS*PCCRPA Trigger: AGCTGGGCGACAGCATGGCCAACTACCCGCAGGGCC...ATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTGAGTAGACTGCATCACACTTaGCCGCTGCTCTCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRERMAIPLDFREHGVSRLHHT*PLLSRP Trigger: AGGCCGTGAGAGCAGCGGGCAAGTGTGATGCAGTCT...ACTCACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | CGGCTGATTCCCACGTGGACACCACTCTTGAAGTCATTCCCCTGGCCTTCTCCTAAAGCCCTTAAAGACTaGATCACACTTGCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIPTWTPLLKSFPWPSPKALKD*ITLARC Trigger: GCAGCGGGCAAGTGTGATGCAGTCTTTAAGGGCTTT...AGGAGAAGGCCAGGGGAATGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037623.15 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | AGTCATTCCCCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCAAAGCCCTTAAAGACTaGATCACACTTGCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSPGLLLFPLAFPLGGAKALKD*ITLARC Trigger: GCAGCGGGCAAGTGTGATGCAGTCTTTAAGGGCTTT...GGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037623.15 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTGAGTGTGGGTCTTTCGCCCCTTCCTaGCAATCCGTAAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRTNGYSSRFPGAWCECGSFAPS*QSVRAV Trigger: CACAGCTCTTACGGATTGCCAGGAAGGGGCGAAAGA...CCCACACTCACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCCATCATTCTATGTGCACACGGTCTTaGTGTTCGTCTTGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLLLFPLAFPLGGAHHSMCTRS*CSSCRP Trigger: TGGACGACAAGACGAACATCAAGACCGTGTGCACAT...AGAATGATGGGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | CACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTGACCGTGCAGCTGTaGAAATCCTCCCAGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: HNVLRERMAIPLDFREHGVTVQL*KSSQYV Trigger: CACATACTGGGAGGATTTCCACAGCTGCACGGTCAC...ACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTGAGTTCTTTCGCCCCTTCCTaGCAATCCGTAAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLRERMAIPLDFREHGVSSFAPS*QSVRAV Trigger: CACAGCTCTTACGGATTGCCAGGAAGGGGCGAAAGA...ACTCACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | CACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTTCTTTCGCCCCTTCCTaGCAATCCGTAAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HNVLRERMAIPLDFREHGSFAPS*QSVRAV Trigger: CACAGCTCTTACGGATTGCCAGGAAGGGGCGAAAGA...ACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | CACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTATGTGCACACGGTCTTaGTGTTCGTCTTGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNVLRERMAIPLDFREHGMCTRS*CSSCRP Trigger: TGGACGACAAGACGAACATCAAGACCGTGTGCACAT...ACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | CAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTATGTGCACACGGTCTTaGTGTTCGTCTTGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRPQRTNGYSSRFPGAWCMCTRS*CSSCRP Trigger: TGGACGACAAGACGAACATCAAGACCGTGTGCACAT...ACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCATCACACTTGCCCGCTaGTCTCACGGCCTGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPQSHMSVFNITENHNVLITLAR*SHGLHQ Trigger: CTGGTGCAGGCCGTGAGAGCAGCGGGCAAGTGTGAT...GAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCCCGCCCCGTTGCTGCTaGCGCAGAGTTCGAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPQSHMSVFNITENHNVLPPRCC*RRVRIS Trigger: GCTTATTCGAACTCTGCGGCAGCAGCAACGGGGCGG...GAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | CGCTCACTGATCGGTAACATTTGGCAAATAAAACACAAGGAATCAAACACAATTACCCCGCCGCCCCGTTaGTGCTGCCGCAGAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLIGNIWQIKHKESNTITPPPR*CCRRVR Trigger: TCGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGT...AATTGTGTTTGATTCCTTGTGTTTTATTTGCCAAATGTTACCGATCAGTGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | CGCTCACTGATCGGTAACATTTGGCAAATAAAACACAAGGAATCAAACACAATTGGCCCTGCGGGTAGTTaGCCATGCTGTCGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLIGNIWQIKHKESNTIGPAGS*PCCRPA Trigger: AGCTGGGCGACAGCATGGCCAACTACCCGCAGGGCC...AATTGTGTTTGATTCCTTGTGTTTTATTTGCCAAATGTTACCGATCAGTGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037623.15 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTCAGCAGGGTCATCCAGACAGTTTGGTGAGCAGGTGAATTTATCACCTTCTTTCGCCCCTTCCTaGCAATCCGTAAGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MKSAGSSRQFGEQVNLSPSFAPS*QSVRAV Trigger: CACAGCTCTTACGGATTGCCAGGAAGGGGCGAAAGA...AGGTGATAAATTCACCTGCTCACCAAACTGTCTGGATGACCCTGCTGACTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGCATGATTATTCACCGGCTGATTCCCACGTGGACACCACTCTTGAAGTCACTTGAGCAAACAGTCTaGAAAGCCCTTAAAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSMIIHRLIPTWTPLLKSLEQTV*KALKDC Trigger: GCAGTCTTTAAGGGCTTTTCAGACTGTTTGCTCAAG...TGACTTCAAGAGTGGTGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037623.15 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTGAGTAGCTGCCTTGGATGTTaGGGTTTTTCGATTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRERMAIPLDFREHGVSSCLGC*GFSILF Trigger: GAAAAGAATCGAAAAACCTCAACATCCAAGGCAGCT...ACTCACACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | GAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCAATCACACTTGCCCGCTaGTCTCACGGCCTGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETGFPTIPYECFQHHRESITLAR*SHGLHQ Trigger: CTGGTGCAGGCCGTGAGAGCAGCGGGCAAGTGTGAT...TGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACCGCCCCGTTGCTGCTaGCGCAGAGTTCGAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGFPTIPYECFQHHRESQPPRCC*RRVRIS Trigger: GCTTATTCGAACTCTGCGGCAGCAGCAACGGGGCGG...TTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAACAAGGTACTGTGGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATTGCTGTCGCCCAGCTTaGGCAAACAGTCTGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQGTVEERREHDYSPADCCRPA*ANSLKS Trigger: GCTTTTCAGACTGTTTGCTCAAGCTGGGCGACAGCA...ATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAGTACCTTGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037623.15 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCCATCATTCTTCATGAGCTGCCTTGGATGTTaGGGTTTTTCGATTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPFPSRFPIRRSPSFFMSCLGC*GFSILF Trigger: GAAAAGAATCGAAAAACCTCAACATCCAAGGCAGCT...CATGAAGAATGATGGGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGAAGACGGACTAAAAGGTGAGGTCCGATTTTGGCTGTGCTCGCTCGCTTCGAATAAGCTGCCTTaGATGTTGAGGTTTTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FCEDGLKGEVRFWLCSLASNKLP*MLRFFD Trigger: ATCGAAAAACCTCAACATCCAAGGCAGCTTATTCGA...AGCGAGCGAGCACAGCCAAAATCGGACCTCACCTTTTAGTCCGTCTTCACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | AATCACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATAGCTGCCTTGGATGTTaGGGTTTTTCGATTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHNVLRERMAIPLDFREHSCLGC*GFSILF Trigger: GAAAAGAATCGAAAAACCTCAACATCCAAGGCAGCT...ATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | CCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCAGACACCGCGAGGATCAGTaGAATATATCTGCCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQSHMSVFNITENHNVLRHREDQ*NISAVQ Trigger: TTGAACGGCAGATATATTTCACTGATCCTCGCGGTG...TCTGAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037623.15 |
||
| CDS-3UTR GCA 90 bp | CTTGTGATCTATACCGTTGGATATTCAGGTATTACTGTATGTGTAACAGCTAAAAGACTGCATCACACTTaGCCGCTGCTCTCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVIYTVGYSGITVCVTAKRLHHT*PLLSRP Trigger: AGGCCGTGAGAGCAGCGGGCAAGTGTGATGCAGTCT...TTTAGCTGTTACACATACAGTAATACCTGAATATCCAACGGTATAGATCACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037623.15 ENSMUST00000224323.2 |
||
| CDS-3UTR GCA 90 bp | ACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCAGAGAAAAGCCCTTAAAGACTaGATCACACTTGCCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIPYECFQHHRESQRPQRKALKD*ITLARC Trigger: GCAGCGGGCAAGTGTGATGCAGTCTTTAAGGGCTTT...TCTCTGAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | GAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCAGTGACCGTGCAGCTGTaGAAATCCTCCCAGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETGFPTIPYECFQHHRESVTVQL*KSSQYV Trigger: CACATACTGGGAGGATTTCCACAGCTGCACGGTCAC...TGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | ACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCAGAGACTTGAGCAAACAGTCTaGAAAGCCCTTAAAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIPYECFQHHRESQRPQRLEQTV*KALKDC Trigger: GCAGTCTTTAAGGGCTTTTCAGACTGTTTGCTCAAG...TCTCTGAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGAGAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAATGTGCACACGGTCTTaGTGTTCGTCTTGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KREKQDFPQSHMSVFNITMCTRS*CSSCRP Trigger: TGGACGACAAGACGAACATCAAGACCGTGTGCACAT...TGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTCTCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAACTTGAGCAAACAGTCTaGAAAGCCCTTAAAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RETGFPTIPYECFQHHRELEQTV*KALKDC Trigger: GCAGTCTTTAAGGGCTTTTCAGACTGTTTGCTCAAG...TTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR TCA 90 bp | CGCTCACTGATCGGTAACATTTGGCAAATAAAACACAAGGAATCAAACACAATTAGCTGCCTTGGATGTTaGGGTTTTTCGATTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLIGNIWQIKHKESNTISCLGC*GFSILF Trigger: GAAAAGAATCGAAAAACCTCAACATCCAAGGCAGCT...AATTGTGTTTGATTCCTTGTGTTTTATTTGCCAAATGTTACCGATCAGTGAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCGAATAAGCTGCCTTaGATGTTGAGGTTTTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RETGFPTIPYECFQHHRESNKLP*MLRFFD Trigger: ATCGAAAAACCTCAACATCCAAGGCAGCTTATTCGA...TTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | GAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCATCGAATAAGCTGCCTTaGATGTTGAGGTTTTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETGFPTIPYECFQHHRESSNKLP*MLRFFD Trigger: ATCGAAAAACCTCAACATCCAAGGCAGCTTATTCGA...TGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CCA 90 bp | CGCTCACTGATCGGTAACATTTGGCAAATAAAACACAAGGAATCAAACACAATTTCGAATAAGCTGCCTTaGATGTTGAGGTTTTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSLIGNIWQIKHKESNTISNKLP*MLRFFD Trigger: ATCGAAAAACCTCAACATCCAAGGCAGCTTATTCGA...AATTGTGTTTGATTCCTTGTGTTTTATTTGCCAAATGTTACCGATCAGTGAGCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | CACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTAAGACTGCATCACACTaGCCCGCTGCTCTCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HNVLRERMAIPLDFREHGKTASH*PAALTA Trigger: GGCCGTGAGAGCAGCGGGCAAGTGTGATGCAGTCTT...ACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAACAAGGTACTGTGGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATGACCCCGCCGCCCCGTaGCTGCTGCCGCAGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SKQGTVEERREHDYSPADDPAAP*LLPQSS Trigger: CGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGTC...ATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAGTACCTTGTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | CCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCAGAGACCCCGCCGCCCCGTaGCTGCTGCCGCAGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PQSHMSVFNITENHNVLRDPAAP*LLPQSS Trigger: CGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGTC...TCTGAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAGAATTCTGGAACCTCGGCGGAGGAAACAAAACGACACCCCATTTCAAACAAGACTGCATCACACTaGCCCGCTGCTCTCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKNSGTSAEETKRHPISNKTASH*PAALTA Trigger: GGCCGTGAGAGCAGCGGGCAAGTGTGATGCAGTCTT...GTTTGAAATGGGGTGTCGTTTTGTTTCCTCCGCCGAGGTTCCAGAATTCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | GAATCACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCAGTCTTGATGTTCGTCTaGTCGTCCAGGCCCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESQRPQRTNGYSSRFPGAVLMFV*SSRPCG Trigger: CCCGCAGGGCCTGGACGACAAGACGAACATCAAGAC...TGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGGACCCCGCCGCCCCGTaGCTGCTGCCGCAGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: REKQDFPQSHMSVFNITEDPAAP*LLPQSS Trigger: CGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGTC...CTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | AGTCATTCCCCTGGCCTTCTCCTTTTCCCTCTCGCTTTCCCATTAGGAGGAGCCTATGTGCACACGGTCTaGATGTTCGTCTTGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHSPGLLLFPLAFPLGGAYVHTV*MFVLSS Trigger: GGACGACAAGACGAACATCAAGACCGTGTGCACATA...GGCTCCTCCTAATGGGAAAGCGAGAGGGAAAAGGAGAAGGCCAGGGGAATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGTGGACCTGAACGAGGGGCATCGACAATAGCAGGTGAAACCGGCCCCTCAAAGCTGCCTTGGATGTaGAGGTTTTTCGATTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSGPERGASTIAGETGPSKLPWM*RFFDSF Trigger: AAAAGAATCGAAAAACCTCAACATCCAAGGCAGCTT...TGAGGGGCCGGTTTCACCTGCTATTGTCGATGCCCCTCGTTCAGGTCCACTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | CGCTCACTGATCGGTAACATTTGGCAAATAAAACACAAGGAATCAAACACAATTGACCCCGCCGCCCCGTaGCTGCTGCCGCAGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSLIGNIWQIKHKESNTIDPAAP*LLPQSS Trigger: CGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGTC...AATTGTGTTTGATTCCTTGTGTTTTATTTGCCAAATGTTACCGATCAGTGAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | ACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGTTCCTCACTCCCTCCTaGTCTCTCAACACTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTSSENEWLFLSISGSMVFLTPS*SLNTSS Trigger: GGAGGAAGTGTTGAGAGACAAGGAGGGAGTGAGGAA...CACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGGAAGAAAGACGTGAGCATGATTATTCACCGGCTGATTCCCACGTGGACATTCCTCACTCCCTCCTaGTCTCTCAACACTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWKKDVSMIIHRLIPTWTFLTPS*SLNTSS Trigger: GGAGGAAGTGTTGAGAGACAAGGAGGGAGTGAGGAA...TGTCCACGTGGGAATCAGCCGGTGAATAATCATGCTCACGTCTTTCTTCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | GAATCACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATATGTGCACACGGTCTaGATGTTCGTCTTGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESQRPQRTNGYSSRFPGAYVHTV*MFVLSS Trigger: GGACGACAAGACGAACATCAAGACCGTGTGCACATA...TGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGTGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGGTCTTGATGTTCGTCTaGTCGTCCAGGCCCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: REKQDFPQSHMSVFNITEVLMFV*SSRPCG Trigger: CCCGCAGGGCCTGGACGACAAGACGAACATCAAGAC...CTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAAACAGGATTTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAAAAGACTGCATCACACTaGCCCGCTGCTCTCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RETGFPTIPYECFQHHREKTASH*PAALTA Trigger: GGCCGTGAGAGCAGCGGGCAAGTGTGATGCAGTCTT...TTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAAATCCTGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | ACAACGTCCTCAGAGAACGAATGGCTATTCCTCTCGATTTCCGGGAGCATGGTGAAGCTGCCTTGGATGTaGAGGTTTTTCGATTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTSSENEWLFLSISGSMVKLPWM*RFFDSF Trigger: AAAAGAATCGAAAAACCTCAACATCCAAGGCAGCTT...CACCATGCTCCCGGAAATCGAGAGGAATAGCCATTCGTTCTCTGAGGACGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCTATGTGCACACGGTCTaGATGTTCGTCTTGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPQSHMSVFNITENHNVLYVHTV*MFVLSS Trigger: GGACGACAAGACGAACATCAAGACCGTGTGCACATA...GAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAGGTTCCCATGAAGTCAGCAGGGTCATCCAGACAGTTTGGTGAGCAGGTGAAGCTGCCTTGGATGTaGAGGTTTTTCGATTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IKVPMKSAGSSRQFGEQVKLPWM*RFFDSF Trigger: AAAAGAATCGAAAAACCTCAACATCCAAGGCAGCTT...CACCTGCTCACCAAACTGTCTGGATGACCCTGCTGACTTCATGGGAACCTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224323.2 |
||
| CDS-3UTR CAA 90 bp | ACAATCCCATATGAGTGTTTTCAACATCACAGAGAATCACAACGTCCTCAGAGAAAGCTGCCTTGGATGTaGAGGTTTTTCGATTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TIPYECFQHHRESQRPQRKLPWM*RFFDSF Trigger: AAAAGAATCGAAAAACCTCAACATCCAAGGCAGCTT...TCTCTGAGGACGTTGTGATTCTCTGTGATGTTGAAAACACTCATATGGGATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 |
||
| CDS GCA 72 bp | CGGAAAGCGCCGGGAGCAGGGACCCCGCCGCCCCGTTaGTGCTGCCGCAGAGTTCGAATAAGCTGCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RKAPGAGTPPPR*CCRRVRISCLG Trigger: TCCAAGGCAGCTTATTCGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGTCCCTGCTCCCGGCGCTTTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 ENSMUST00000224960.2 |
||
| CDS CAA 72 bp | ACGGAAAGCGCCGGGAGCAGGGACCCCGCCGCCCCGTaGCTGCTGCCGCAGAGTTCGAATAAGCTGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TESAGSRDPAAP*LLPQSSNKLPW Trigger: CCAAGGCAGCTTATTCGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGTCCCTGCTCCCGGCGCTTTCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 ENSMUST00000224960.2 |
||
| CDS CAA 90 bp | ACCAGGAGCACGGAAAGCGCCGGGAGCAGGGACCCCGCCGCCCCGTaGCTGCTGCCGCAGAGTTCGAATAAGCTGCCTTGGATGTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRSTESAGSRDPAAP*LLPQSSNKLPWMLR Trigger: CCTCAACATCCAAGGCAGCTTATTCGAACTCTGCGGCAGCAGCAACGGGGCGGCGGGGTCCCTGCTCCCGGCGCTTTCCGTGCTCCTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 ENSMUST00000224960.2 |
||
| CDS CCA 72 bp | TCCTGGCAATCCGTAAGAGCTGTGACCGTGCAGCTGTaGAAATCCTCCCAGTATGTGCACACGGTCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SWQSVRAVTVQL*KSSQYVHTVLM Trigger: CATCAAGACCGTGTGCACATACTGGGAGGATTTCCACAGCTGCACGGTCACAGCTCTTACGGATTGCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 ENSMUST00000224960.2 |
||
| CDS CCA 72 bp | TTTCTCAGTTTATCCCACATATCTTTCGCCCCTTCCTaGCAATCCGTAAGAGCTGTGACCGTGCAGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLSLSHISFAPS*QSVRAVTVQLW Trigger: CCACAGCTGCACGGTCACAGCTCTTACGGATTGCCAGGAAGGGGCGAAAGATATGTGGGATAAACTGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037623.15 ENSMUST00000122286.2 ENSMUST00000223611.2 ENSMUST00000224323.2 ENSMUST00000224960.2 |
||