Pregenerated sensors for NRIP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034825Ensembl transcript IDs: ENSMUST00000033331.7, ENSMUST00000041460.13, ENSMUST00000207400.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCTGCCTaGAGGGTTCACTCCCCATTTCAGTCTCAGGAAAGTCTCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: LPSLYRGLASLYFPA*RVHSPFQSQESLPG Trigger: ACCTGGGAGACTTTCCTGAGACTGAAATGGGGAGTGAACCCTCCAGGCAGGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR GCA 90 bp | CTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCTaGCTGGAGGGTTCACTCCCCATTTCAGTCTCAGGAAAGTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: LSPFPVPRACQPLLP*LEGSLPISVSGKSP Trigger: GGGAGACTTTCCTGAGACTGAAATGGGGAGTGAACCCTCCAGGCAGGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR GCA 90 bp | CACTATGTAGACCAGGCTGGTCTCATATCTGCCTGCCCCTGCCTCTaGCTTCTGGGTGCTGGTGTTAAAGGCATATGCTACATCCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: HYVDQAGLISACPCL*LLGAGVKGICYIQL Trigger: CAGCTGGATGTAGCATATGCCTTTAACACCAGCACCCAGAAGGCAGAGGCAGGGGCAGGCAGATATGAGACCAGCCTGGTCTACATAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR GCA 90 bp | GCCTGCCCCTGCCTCTGCCTTCTGGGTGCTGGTGTTAAAGGCATATaGTACATCCAGCTGTTAATGGTTCTTAATGCTGCCGGCTACCTT | + |
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Preference number: 1 (lower is better) Translates to: ACPCLCLLGAGVKGI*YIQLLMVLNAAGYL Trigger: AAGGTAGCCGGCAGCATTAAGAACCATTAACAGCTGGATGTAGCATATGCCTTTAACACCAGCACCCAGAAGGCAGAGGCAGGGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CCA 90 bp | TGGAGCTGTGCACCTGTGCACACTCACAGAGGCCAGAGGAACATGTaGGTGTCATGTCATCTATTCCTCTACCACACTTCACTTGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: WSCAPVHTHRGQRNM*VSCHLFLYHTSLGS Trigger: GGAACCAAGTGAAGTGTGGTAGAGGAATAGATGACATGACACCCACATGTTCCTCTGGCCTCTGTGAGTGTGCACAGGTGCACAGCTCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CCA 90 bp | ATTCCTCTCTCTCTTTTGGTTAGACTGGAAGCTAGAAAGTTCCATTaGGGTCTCAGGTGTGTGTGGGACAATGCCCAGCTTTTGTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: IPLSLLVRLEARKFH*GLRCVWDNAQLLFG Trigger: CCCAAACAAAAGCTGGGCATTGTCCCACACACACCTGAGACCCCAATGGAACTTTCTAGCTTCCAGTCTAACCAAAAGAGAGAGAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CCA 90 bp | CCTCAAATTAAAATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTaGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCC | + |
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Preference number: 1 (lower is better) Translates to: PQIKMEIPGCASSAS*MRCVLRSETGLLLP Trigger: GGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCATTTTAATTTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR TCA 90 bp | GGCAGGCTGATTTCTATGAGTTTGAGGCTTGTCTCATCTACATATTaGGTTTCAGGCCAGCCTAGCCCACATAATAAGATCCTGTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GRLISMSLRLVSSTY*VSGQPSPHNKILSH Trigger: ATGAGACAGGATCTTATTATGTGGGCTAGGCTGGCCTGAAACTCAATATGTAGATGAGACAAGCCTCAAACTCATAGAAATCAGCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR GCA 90 bp | TTCTCTTGTTCATTGAGAGACTGTTTCATCTTTGTAGCCTGTTTTTaGACCCTCTCATCTTCCCTGTGGTGTGTGTCCATGTGTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: FSCSLRDCFIFVACF*TLSSSLWCVSMCVC Trigger: ACAGACACACATGGACACACACCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCTCAATGAACAAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR TCA 90 bp | GAAACTGTAAGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAATaGCGAGTCACAGGCAGGCTGATTTCTATGAGTTTGAGGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: ETVRVVNLAAFKKHQ*RVTGRLISMSLRLV Trigger: GACAAGCCTCAAACTCATAGAAATCAGCCTGCCTGTGACTCGTCATTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCTTACAGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CCA 90 bp | GCATTACTAAACCCCAAGACTTCCTATAGTTATCTTGAAGCATTTTaGGTATCTCTATTATACCTAGGGACTCAAGTAATTTGGTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: ALLNPKTSYSYLEAF*VSLLYLGTQVIWLE Trigger: TTCTAACCAAATTACTTGAGTCCCTAGGTATAATAGAGATACCCAAAATGCTTCAAGATAACTATAGGAAGTCTTGGGGTTTAGTAATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTGGAGCTGTGCACCTGTaGACACTCACAGAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTGAVHL*TLTEAR Trigger: TCTGGCCTCTGTGAGTGTGCACAGGTGCACAGCTCC...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCCCACTCAGCATACTCTaGCTCTTCCTTCTATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: AGYLSPFPVPRACQPLLPPLSIL*LFLLFW Trigger: CCAGAATAGAAGGAAGAGGCAGAGTATGCTGAGTGG...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCATCAGGTCTGGATTCTaGTTGTCTTCTGCCATGACT | + |
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Preference number: 2 (lower is better) Translates to: AGYLSPFPVPRACQPLLPIRSGF*LSSAMT Trigger: AGTCATGGCAGAAGACAAGCAGAATCCAGACCTGAT...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTTTGTAGCCTGTTTTTaGACCCTCTCATCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTFVACF*TLSSSL Trigger: CAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAA...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCAAAATCAATGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTGGGCCTGCCCCTGCCTCTaGCTTCTGGGTGCTGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: KGQNQCLFQEPEKSWPYWACPCL*LLGAGV Trigger: AACACCAGCACCCAGAAGGCAGAGGCAGGGGCAGGC...CCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCATTGATTTTGGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCGACAGACATTCTGACTaGTCCTTAGGGGTAATCAAT | + |
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Preference number: 2 (lower is better) Translates to: AGYLSPFPVPRACQPLLPDRHSD*SLGVIN Trigger: ATTGATTACCCCTAAGGACCAGTCAGAATGTCTGTC...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTACTCAGTCTGTCAACCTaGTGTGTGTGTGCACATGCG | + |
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Preference number: 2 (lower is better) Translates to: WMRCVLRSETGLLLPRDLLSLST*CVCAHA Trigger: CGCATGTGCACACACACACCAGGTTGACAGACTGAG...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGCCCTGCAGGATGTACTaGAGGGAAGGACTTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: MEIPGCASSASWMRCVLRPCRMY*REGLGP Trigger: TGGACCAAGTCCTTCCCTCCAGTACATCCTGCAGGG...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTAGGTCTCAGGTGTGTGTaGGACAATGCCCAGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: WMRCVLRSETGLLLPRDLGLRCV*DNAQLL Trigger: CAAAAGCTGGGCATTGTCCCACACACACCTGAGACC...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCCAAAATCAATGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTGGGGAGCCTCAGGAAGGTaGAGGTTCCTCCCACACAAG | + |
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Preference number: 2 (lower is better) Translates to: KGQNQCLFQEPEKSWPYWGASGR*RFLPHK Trigger: CTTGTGTGGGAGGAACCTGCACCTTCCTGAGGCTCC...CCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCATTGATTTTGGCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTAGAGCCTGCAGTCTGCTaGTGTGATGAACAAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: WMRCVLRSETGLLLPRDLEPAVC*CDEQKC Trigger: GCACTTTTGTTCATCACAGCAGCAGACTGCAGGCTC...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGCTCAGTCTGTCAACCTaGTGTGTGTGTGCACATGCG | + |
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Preference number: 2 (lower is better) Translates to: MEIPGCASSASWMRCVLRLSLST*CVCAHA Trigger: CGCATGTGCACACACACACCAGGTTGACAGACTGAG...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTACTTTACTTCCCTGCCTaGAGGGTTCACTCCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: WMRCVLRSETGLLLPRDLLYFPA*RVHSPF Trigger: AAATGGGGAGTGAACCCTCCAGGCAGGGAAGTAAAG...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | GCACCTGTGCACACTCACAGAGGCCAGAGGAACATGTGGGTGTCATGTCATCTATTACCCCTCCTTTCTTaGACTTTAACCTTCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: APVHTHRGQRNMWVSCHLLPLLS*TLTFLP Trigger: AGGCAGGAAGGTTAAAGTGCAAGAAAGGAGGGGTAA...TAGATGACATGACACCCACATGTTCCTCTGGCCTCTGTGAGTGTGCACAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTCAGGAACTAATAATATaGCTTCCTATCTGTGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTQELII*LPICGF Trigger: GAAACCACAGATAGGAAGGCATATTATTAGTTCCTG...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTCTCTTTTGGTTAGACTaGAAGCTAGAAAGTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTLFWLD*KLESSI Trigger: AATGGAACTTTCTAGCTTCCAGTCTAACCAAAAGAG...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | GGTATGTGCAGAGCAAGGAAAAAGGAAAGTCAGAAGACATCCCTTCCTCAAATTGGAGCTGTGCACCTGTaGACACTCACAGAGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GMCRARKKESQKTSLPQIGAVHL*TLTEAR Trigger: TCTGGCCTCTGTGAGTGTGCACAGGTGCACAGCTCC...AATTTGAGGAAGGGATGTCTTCTGACTTTCCTTTTTCCTTGCTCTGCACATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | CACAGGGACAACTACATTGTCAGTGGTGTCTCAGGAACTAATAATATGCCTTCCCCCTGCAGGATGTACTaGAGGGAAGGACTTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: HRDNYIVSGVSGTNNMPSPCRMY*REGLGP Trigger: TGGACCAAGTCCTTCCCTCCAGTACATCCTGCAGGG...GGAAGGCATATTATTAGTTCCTGAGACACCACTGACAATGTAGTTGTCCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCAAAATCAATGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTGGGGTCTCAGGTGTGTGTaGGACAATGCCCAGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: KGQNQCLFQEPEKSWPYWGLRCV*DNAQLL Trigger: CAAAAGCTGGGCATTGTCCCACACACACCTGAGACC...CCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCATTGATTTTGGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGATTTGTATGAGTGCATaGAGCTGTGCACCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: MEIPGCASSASWMRCVLRICMSA*SCAPVH Trigger: GTGCACAGGTGCACAGCTCCATGCACTCATACAAAT...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CAA 90 bp | TCTGAGCGGGAAGAAGCCCCTGCAGGATGTACTGGAGGGAAGGACTaGGTCCATAGCAAGTTGCTATTGTATTTAGTTCAAACCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SEREEAPAGCTGGKD*VHSKLLLYLVQTQF Trigger: AAACTGGGTTTGAACTAAATACAATAGCAACTTGCTATGGACCAAGTCCTTCCCTCCAGTACATCCTGCAGGGGCTTCTTCCCGCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CAA 90 bp | ACAAGCCATCTCTCTATCTCTAGTGCTGTGATGGAACCCAGGACCTaGTGTACATTAGACAAGCAGGCCACCACAAAGCCACATCCATTA | + |
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Preference number: 2 (lower is better) Translates to: TSHLSISSAVMEPRT*CTLDKQATTKPHPL Trigger: TAATGGATGTGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGTTCCATCACAGCACTAGAGATAGAGAGATGGCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTCTCCCAGGTAGACTTCCCCACTCAGCATACTCTGCCTCTTCCTTCTATATCAGGTCTGGATTCTaGTTGTCTTCTGCCATGACT | + |
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Preference number: 2 (lower is better) Translates to: ESLPGRLPHSAYSASSFYIRSGF*LSSAMT Trigger: AGTCATGGCAGAAGACAAGCAGAATCCAGACCTGAT...ATAGAAGGAAGAGGCAGAGTATGCTGAGTGGGGAAGTCTACCTGGGAGACTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCAAAATCAATGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTGGGCTAGAAAGTTCCATTaGGGTCTCAGGTGTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: KGQNQCLFQEPEKSWPYWARKFH*GLRCVW Trigger: CCACACACACCTGAGACCCCAATGGAACTTTCTAGC...CCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCATTGATTTTGGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CAA 90 bp | GCCCCTGCAGGATGTACTGGAGGGAAGGACTTGGTCCATAGCAAGTaGCTATTGTATTTAGTTCAAACCCAGTTTTCTCAGTCTGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: APAGCTGGKDLVHSK*LLYLVQTQFSQSVN Trigger: GTTGACAGACTGAGAAAACTGGGTTTGAACTAAATACAATAGCAACTTGCTATGGACCAAGTCCTTCCCTCCAGTACATCCTGCAGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | TATGACATGGAGTCCAGTTCACCCATTGGTTCTATTCCCAGATTAGAAAATAACGGTCTCATATCTGCCTaGCCCTGCCTCTGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: YDMESSSPIGSIPRLENNGLISA*PCLCLL Trigger: CAGAAGGCAGAGGCAGGGGCAGGCAGATATGAGACC...GTTATTTTCTAATCTGGGAATAGAACCAATGGGTGAACTGGACTCCATGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGTTTGGATATCAGGTCTaGATTCTGCTTGTCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: MEIPGCASSASWMRCVLRFGYQV*ILLVFC Trigger: GCAGAAGACAAGCAGAATCCAGACCTGATATCCAAA...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTAGGGGTAATCAATATCCCACAGGGACAACTACATTGTCAGTGGTGTCTATTTGTATGAGTGCATaGAGCTGTGCACCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: VLRGNQYPTGTTTLSVVSICMSA*SCAPVH Trigger: GTGCACAGGTGCACAGCTCCATGCACTCATACAAAT...AGACACCACTGACAATGTAGTTGTCCCTGTGGGATATTGATTACCCCTAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR CCA 90 bp | TATGACATGGAGTCCAGTTCACCCATTGGTTCTATTCCCAGATTAGAAAATAACGAACCTGAGAAGTCCTaGCCTTACTGGCCCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: YDMESSSPIGSIPRLENNEPEKS*PYWPPG Trigger: TCCTGGGGGCCAGTAAGGCCAGGACTTCTCAGGTTC...GTTATTTTCTAATCTGGGAATAGAACCAATGGGTGAACTGGACTCCATGTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CAA 90 bp | GCAGGATGTACTGGAGGGAAGGACTTGGTCCATAGCAAGTTGCTATaGTATTTAGTTCAAACCCAGTTTTCTCAGTCTGTCAACCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: AGCTGGKDLVHSKLL*YLVQTQFSQSVNLV Trigger: CACCAGGTTGACAGACTGAGAAAACTGGGTTTGAACTAAATACAATAGCAACTTGCTATGGACCAAGTCCTTCCCTCCAGTACATCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR CAA 90 bp | CTTCTCTTGTTCATTGAGAGACTGTTTCATCTTTGTAGCCTGTTTTaGCACCCTCTCATCTTCCCTGTGGTGTGTGTCCATGTGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LLLFIERLFHLCSLF*HPLIFPVVCVHVCL Trigger: CAGACACACATGGACACACACCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCTCAATGAACAAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTACTACTTGAATCTTTGTaGCATGTAACAAGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: WMRCVLRSETGLLLPRDLLLESL*HVTRQT Trigger: TGTCTGTCTTGTTACATGTCACAAAGATTCAAGTAG...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| 3UTR-3UTR GCA 90 bp | GCTTATGAAGCAAGCACTCTTAATAAACAAGCCATCTCTCTATCTCTAGTGCTGAACCTGGTGTGTGTGTaGACATGCGCACACGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: AYEASTLNKQAISLSLVLNLVCV*TCAHAS Trigger: TGAAGCGTGTGCGCATGTGCACACACACACCAGGTT...CAGCACTAGAGATAGAGAGATGGCTTGTTTATTAAGAGTGCTTGCTTCATAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGTGCAGAGCAAGGAAAAAGGAAAGTCAGAAGACATCCCTTCCTCAAATTGCTAGAAAGTTCCATTaGGGTCTCAGGTGTGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GMCRARKKESQKTSLPQIARKFH*GLRCVW Trigger: CCACACACACCTGAGACCCCAATGGAACTTTCTAGC...AATTTGAGGAAGGGATGTCTTCTGACTTTCCTTTTTCCTTGCTCTGCACATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTAATGCCTTCCTATCTGTaGTTTCTTTCTTCTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: WMRCVLRSETGLLLPRDLMPSYL*FLSSLV Trigger: AACAAGAGAAGAAAGAAACCACAGATAGGAAGGCAT...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR GCA 90 bp | TATGACATGGAGTCCAGTTCACCCATTGGTTCTATTCCCAGATTAGAAAATAACAACCTGGTGTGTGTGTaGACATGCGCACACGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: YDMESSSPIGSIPRLENNNLVCV*TCAHAS Trigger: TGAAGCGTGTGCGCATGTGCACACACACACCAGGTT...GTTATTTTCTAATCTGGGAATAGAACCAATGGGTGAACTGGACTCCATGTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAGACAGAAACTGTAAGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAAGGAGCCTCAGGAAGGTaGAGGTTCCTCCCACACAAG | + |
|
Preference number: 2 (lower is better) Translates to: EETETVRVVNLAAFKKHQGASGR*RFLPHK Trigger: CTTGTGTGGGAGGAACCTGCACCTTCCTGAGGCTCC...TTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCTTACAGTTTCTGTCTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACTGTTTCATCTTTGTAGCCTGTTTTTGCACCCTCTCATCTTCCCTGTGGAGCAAGTGTTATCTATaGAGAAGTAGAACCTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RDCFIFVACFCTLSSSLWSKCYL*RSRTWQ Trigger: CTGCCAGGTTCTACTTCTCCATAGATAACACTTGCT...CCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTACTCTTCCTTCTATTCTaGACTACTGTGGTTTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: WMRCVLRSETGLLLPRDLLFLLF*TTVVFI Trigger: AATAAAAACCACAGTAGTCCAGAATAGAAGGAAGAG...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR TCA 90 bp | GAAGAGACAGAAACTGTAAGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAATTGAGACCGTCTCCCTaGCTGGCCTGGAACTCACTA | + |
|
Preference number: 2 (lower is better) Translates to: EETETVRVVNLAAFKKHQLRPSP*LAWNSL Trigger: TAGTGAGTTCCAGGCCAGTCAGGGAGACGGTCTCAA...TTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCTTACAGTTTCTGTCTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAGACAGAAACTGTAAGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAACCTGCCTCTGCCTTCTaGGTGCTGGTGTTAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: EETETVRVVNLAAFKKHQPASAF*VLVLKA Trigger: TGCCTTTAACACCAGCACCCAGAAGGCAGAGGCAGG...TTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCTTACAGTTTCTGTCTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR TCA 90 bp | AGAGACTGTTTCATCTTTGTAGCCTGTTTTTGCACCCTCTCATCTTCCCTGTGGGCCCCTACACTGGATTaGTTAATAAAAAGCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: RDCFIFVACFCTLSSSLWAPTLD*LIKSKF Trigger: GAATTTGCTTTTTATTAATCAATCCAGTGTAGGGGC...CCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGTGCAGAGCAAGGAAAAAGGAAAGTCAGAAGACATCCCTTCCTCAAATTTTTGGATATCAGGTCTaGATTCTGCTTGTCTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GMCRARKKESQKTSLPQIFGYQV*ILLVFC Trigger: GCAGAAGACAAGCAGAATCCAGACCTGATATCCAAA...AATTTGAGGAAGGGATGTCTTCTGACTTTCCTTTTTCCTTGCTCTGCACATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR TCA 90 bp | GGTATGTGCAGAGCAAGGAAAAAGGAAAGTCAGAAGACATCCCTTCCTCAAATTGCCCCTACACTGGATTaGTTAATAAAAAGCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: GMCRARKKESQKTSLPQIAPTLD*LIKSKF Trigger: GAATTTGCTTTTTATTAATCAATCCAGTGTAGGGGC...AATTTGAGGAAGGGATGTCTTCTGACTTTCCTTTTTCCTTGCTCTGCACATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCATACTCTGCCTCTTCCTTCTATTCTGGACTACTGTGGTTTTTATTTTTCTTCCTCTCTCTCTTTTaGTTAGACTGGAAGCTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SAYSASSFYSGLLWFLFFFLSLF*LDWKLE Trigger: TTCTAGCTTCCAGTCTAACCAAAAGAGAGAGAGGAA...GAAAAATAAAAACCACAGTAGTCCAGAATAGAAGGAAGAGGCAGAGTATGCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | GGTATGTGCAGAGCAAGGAAAAAGGAAAGTCAGAAGACATCCCTTCCTCAAATTCAGATCAGGGAATACTaGACAGTTTTAAAGGTTATT | + |
|
Preference number: 2 (lower is better) Translates to: GMCRARKKESQKTSLPQIQIREY*TVLKVI Trigger: AATAACCTTTAAAACTGTCCAGTATTCCCTGATCTG...AATTTGAGGAAGGGATGTCTTCTGACTTTCCTTTTTCCTTGCTCTGCACATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCATACTCTGCCTCTTCCTTCTATTCTGGACTACTGTGGTTTTTATTTTTCCTCTTTTGGTTAGACTaGAAGCTAGAAAGTTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SAYSASSFYSGLLWFLFFLFWLD*KLESSI Trigger: AATGGAACTTTCTAGCTTCCAGTCTAACCAAAAGAG...GAAAAATAAAAACCACAGTAGTCCAGAATAGAAGGAAGAGGCAGAGTATGCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CCA 90 bp | TATGACATGGAGTCCAGTTCACCCATTGGTTCTATTCCCAGATTAGAAAATAACATGCCTTCCTATCTGTaGTTTCTTTCTTCTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: YDMESSSPIGSIPRLENNMPSYL*FLSSLV Trigger: AACAAGAGAAGAAAGAAACCACAGATAGGAAGGCAT...GTTATTTTCTAATCTGGGAATAGAACCAATGGGTGAACTGGACTCCATGTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR GCA 72 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTaGCAGCCTTTACTTCCCTGCCTGGAGGGTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: AGYLSPFPVPRA*QPLLPCLEGSL Trigger: GAGTGAACCCTCCAGGCAGGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR GCA 72 bp | TTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCTaGCTGGAGGGTTCACTCCCCATTTCAGTCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPVPRACQPLLP*LEGSLPISVSG Trigger: TCCTGAGACTGAAATGGGGAGTGAACCCTCCAGGCAGGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | CTGTACCGAGGGCTTGCCAGCCTTTACTTCCCTGCCTaGAGGGTTCACTCCCCATTTCAGTCTCAGGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LYRGLASLYFPA*RVHSPFQSQES Trigger: ACTTTCCTGAGACTGAAATGGGGAGTGAACCCTCCAGGCAGGGAAGTAAAGGCTGGCAAGCCCTCGGTACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | TGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTaGCCCCCAGGAAATCCAACCAGAGACACTAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLFQEPEKSWPY*PPGNPTRDTRR Trigger: CCTTCTAGTGTCTCTGGTTGGATTTCCTGGGGGCCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR TCA 72 bp | GGAGGAATCCAGTTCCTCTCCTCCAAGTCCCCAGCCTaGAAGGTATTTCTACTACACAAGAGTAAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGIQFLSSKSPA*KVFLLHKSKGS Trigger: GCTGCCCTTACTCTTGTGTAGTAGAAATACCTTTCAGGCTGGGGACTTGGAGGAGAGGAACTGGATTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | GCACCTGTGCACACTCACAGAGGCCAGAGGAACATGTaGGTGTCATGTCATCTATTCCTCTACCACACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: APVHTHRGQRNM*VSCHLFLYHTS Trigger: TGAAGTGTGGTAGAGGAATAGATGACATGACACCCACATGTTCCTCTGGCCTCTGTGAGTGTGCACAGGTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTCATAGCAAGTTGCTATaGTATTTAGTTCAAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTHSKLL*YLVQTQ Trigger: CTGGGTTTGAACTAAATACAATAGCAACTTGCTATG...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR GCA 72 bp | AGTGTGTGTAGGAATTTGTATGAGTGCATGGAGCTGTaGACCTGTGCACACTCACAGAGGCCAGAGGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SVCRNLYECMEL*TCAHSQRPEEH Trigger: ATGTTCCTCTGGCCTCTGTGAGTGTGCACAGGTGCACAGCTCCATGCACTCATACAAATTCCTACACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGACCTTGTGTACATTAGACAAGCAGGCCACCACAAAGCCACATCCATTAGCAGCATAAGAGCCTaGGTTTGGATATCAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TQDLVYIRQAGHHKATSISSIRA*VWISGL Trigger: CAGACCTGATATCCAAACCAAGGCTCTTATGCTGCT...AATGGATGTGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR TCA 72 bp | CTCATCTTCCCTGTGGTGTGTGTCCATGTGTGTCTGTaGGTGTGTGTAGGAATTTGTATGAGTGCATGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LIFPVVCVHVCL*VCVGICMSAWS Trigger: GCTCCATGCACTCATACAAATTCCTACACACACTCACAGACACACATGGACACACACCACAGGGAAGATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR GCA 72 bp | AAAGTTCCATTGGGGTCTCAGGTGTGTGTGGGACAATaGCCAGCTTTTGTTTGGGTACTAGGATCCAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: KVPLGSQVCVGQ*PAFVWVLGSKW Trigger: CCATTTGGATCCTAGTACCCAAACAAAAGCTGGGCATTGTCCCACACACACCTGAGACCCCAATGGAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR GCA 72 bp | TGCCTCTGCCTTCTGGGTGCTGGTGTTAAAGGCATATaGTACATCCAGCTGTTAATGGTTCTTAATGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CLCLLGAGVKGI*YIQLLMVLNAA Trigger: GGCAGCATTAAGAACCATTAACAGCTGGATGTAGCATATGCCTTTAACACCAGCACCCAGAAGGCAGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | TCTCTTTTGGTTAGACTGGAAGCTAGAAAGTTCCATTaGGGTCTCAGGTGTGTGTGGGACAATGCCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLVRLEARKFH*GLRCVWDNAQL Trigger: AAGCTGGGCATTGTCCCACACACACCTGAGACCCCAATGGAACTTTCTAGCTTCCAGTCTAACCAAAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGATTCCTCTCTCTCTTTaGGTTAGACTGGAAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: MEIPGCASSASWMRCVLRIPLSL*VRLEAR Trigger: TCTAGCTTCCAGTCTAACCAAAAGAGAGAGAGGAAT...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCCAAAATCAATGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTGGACAGGGACAACTACATaGTCAGTGGTGTCTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGQNQCLFQEPEKSWPYWTGTTT*SVVSQE Trigger: TTCCTGAGACACCACTGACAATGTAGTTGTCCCTGT...CCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCATTGATTTTGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | TCTCAGGTGTGTGTGGGACAATGCCCAGCTTTTGTTTaGGTACTAGGATCCAAATGGCAGTCTTCATGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SQVCVGQCPAFV*VLGSKWQSSCL Trigger: TAAGCATGAAGACTGCCATTTGGATCCTAGTACCCAAACAAAAGCTGGGCATTGTCCCACACACACCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR GCA 72 bp | TCATTGAGAGACTGTTTCATCTTTGTAGCCTGTTTTTaGACCCTCTCATCTTCCCTGTGGTGTGTGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SLRDCFIFVACF*TLSSSLWCVSM Trigger: CATGGACACACACCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCTCAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | TCTTCCTGTCTATTCCTCTCTCTCTTTTGGTTAGACTaGAAGCTAGAAAGTTCCATTGGGGTCTCAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSCLFLSLFWLD*KLESSIGVSGV Trigger: CACACCTGAGACCCCAATGGAACTTTCTAGCTTCCAGTCTAACCAAAAGAGAGAGAGGAATAGACAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR TCA 72 bp | GAAGATTCAGATGGTGAGAATGAACTGAGTGAGCTATaGCATGGAGTCCAGTTCACCCATTGGTTCTATTCC | + |
|
Preference number: 3 (lower is better) Translates to: EDSDGENELSEL*HGVQFTHWFYS Trigger: GGAATAGAACCAATGGGTGAACTGGACTCCATGTCATAGCTCACTCAGTTCATTCTCACCATCTGAATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | TTTGTGACATGTAACAAGACAGACAGACATTCTGACTaGTCCTTAGGGGTAATCAATATCCCACAGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: FVTCNKTDRHSD*SLGVINIPQGQ Trigger: TTGTCCCTGTGGGATATTGATTACCCCTAAGGACCAGTCAGAATGTCTGTCTGTCTTGTTACATGTCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | CCCCAGTCCACTGAGATGGGTCAGATCAGGGAATACTaGACAGTTTTAAAGGTTATTCTGGTTTCTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PQSTEMGQIREY*TVLKVILVSLF Trigger: AAACAAAGAAACCAGAATAACCTTTAAAACTGTCCAGTATTCCCTGATCTGACCCATCTCAGTGGACTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | TATGACATGGAGTCCAGTTCACCCATTGGTTCTATTCCCAGATTAGAAAATAACCTTTGTAGCCTGTTTTaGCACCCTCTCATCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YDMESSSPIGSIPRLENNLCSLF*HPLIFP Trigger: AGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAG...GTTATTTTCTAATCTGGGAATAGAACCAATGGGTGAACTGGACTCCATGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTTAGGGGTAATCAATATCCCACAGGGACAACTACATTGTCAGTGGTGTCTGGTTTCTTTCTTCTCTaGTTCATTGAGAGACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLRGNQYPTGTTTLSVVSGFFLL*FIERLF Trigger: AAACAGTCTCTCAATGAACAAGAGAAGAAAGAAACC...AGACACCACTGACAATGTAGTTGTCCCTGTGGGATATTGATTACCCCTAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCCAAAATCAATGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTGGGGTTTCTTTCTTCTCTaGTTCATTGAGAGACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KGQNQCLFQEPEKSWPYWGFFLL*FIERLF Trigger: AAACAGTCTCTCAATGAACAAGAGAAGAAAGAAACC...CCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCATTGATTTTGGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR TCA 72 bp | GCCATGTATTCATCCTGGTACCATATAGTACCCAACTaGAAAAGGCCAAAATCAATGCCTCTTTCAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: AMYSSWYHIVPN*KRPKSMPLSRT Trigger: GGTTCTTGAAAGAGGCATTGATTTTGGCCTTTTTCAGTTGGGTACTATATGGTACCAGGATGAATACATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGGACAACTACATTGTCAGTGGTGTCTCAGGAACTAATAATATGCCTTCCCATAGCAAGTTGCTATaGTATTTAGTTCAAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HRDNYIVSGVSGTNNMPSHSKLL*YLVQTQ Trigger: CTGGGTTTGAACTAAATACAATAGCAACTTGCTATG...GGAAGGCATATTATTAGTTCCTGAGACACCACTGACAATGTAGTTGTCCCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | GGTATGTGCAGAGCAAGGAAAAAGGAAAGTCAGAAGACATCCCTTCCTCAAATTAGGGACTCAAGTAATTaGGTTAGAAGATTCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: GMCRARKKESQKTSLPQIRDSSN*VRRFRW Trigger: CCATCTGAATCTTCTAACCAAATTACTTGAGTCCCT...AATTTGAGGAAGGGATGTCTTCTGACTTTCCTTTTTCCTTGCTCTGCACATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGACAGAAACTGTAAGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAAAGCAGCATAAGAGCCTaGGTTTGGATATCAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EETETVRVVNLAAFKKHQSSIRA*VWISGL Trigger: CAGACCTGATATCCAAACCAAGGCTCTTATGCTGCT...TTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCTTACAGTTTCTGTCTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR TCA 72 bp | TTTCCCTATCTCTACTTCCAGCTACTTGAATCTTTGTaGCATGTAACAAGACAGACAGACATTCTGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FPYLYFQLLESL*HVTRQTDILTG Trigger: ACCAGTCAGAATGTCTGTCTGTCTTGTTACATGTCACAAAGATTCAAGTAGCTGGAAGTAGAGATAGGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR TCA 72 bp | ATTTCTATGAGTTTGAGGCTTGTCTCATCTACATATTaGGTTTCAGGCCAGCCTAGCCCACATAATAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: ISMSLRLVSSTY*VSGQPSPHNKI Trigger: GATCTTATTATGTGGGCTAGGCTGGCCTGAAACTCAATATGTAGATGAGACAAGCCTCAAACTCATAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR TCA 72 bp | AGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAATaGCGAGTCACAGGCAGGCTGATTTCTATGAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RVVNLAAFKKHQ*RVTGRLISMSL Trigger: CAAACTCATAGAAATCAGCCTGCCTGTGACTCGTCATTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | TGGGTATCTCTATTATACCTAGGGACTCAAGTAATTTaGTTAGAAGATTCAGATGGTGAGAATGAACTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: WVSLLYLGTQVI*LEDSDGENELS Trigger: ACTCAGTTCATTCTCACCATCTGAATCTTCTAACCAAATTACTTGAGTCCCTAGGTATAATAGAGATACCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CCA 72 bp | AACCCCAAGACTTCCTATAGTTATCTTGAAGCATTTTaGGTATCTCTATTATACCTAGGGACTCAAGTAATT | + |
|
Preference number: 3 (lower is better) Translates to: NPKTSYSYLEAF*VSLLYLGTQVI Trigger: AATTACTTGAGTCCCTAGGTATAATAGAGATACCCAAAATGCTTCAAGATAACTATAGGAAGTCTTGGGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTACGAGCCCAGCTTTTTaGGGCCGTCCAGGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTTSPAF*GRPGAA Trigger: TGCTGCCCCTGGACGGCCTCAAAAAGCTGGGCTCGT...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | TGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTaGCCAGCCTTTACTTCCCTGCCTGGAGGGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CRLPFSLPCTEG*PAFTSLPGGFT Trigger: AGTGAACCCTCCAGGCAGGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCCTGAGTCCTTGTGGATaGACTGCACCGCCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGYLSPFPVPRACQPLLPLSPCG*TAPPAS Trigger: TGAAGCAGGCGGTGCAGTTCATCCACAAGGACTCAG...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCACAGGTTGGTTTCCATaGGGCGCCTCTGCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: AGYLSPFPVPRACQPLLPTGWFP*GASAEC Trigger: ACATTCTGCAGAGGCGCCTCATGGAAACCAACCTGT...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCTCCCAGGTAGACTTCCCCACTCAGCATACTCTGCCTCTTCCTTCTATTTCATCCGGCGCTGCTaGCGCAGGGACGCCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLPGRLPHSAYSASSFYFIRRC*RRDAAS Trigger: GGAAGCGGCGTCCCTGCGGCAGCAGCGCCGGATGAA...ATAGAAGGAAGAGGCAGAGTATGCTGAGTGGGGAAGTCTACCTGGGAGACTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR CCA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCTCAACCACAGCTGCTTaGCAATCCAGACGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGYLSPFPVPRACQPLLPSTTAA*QSRRRE Trigger: TTCTCTCCGTCTGGATTGCCAAGCAGCTGTGGTTGA...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGACCTTGTGTACATTAGACAAGCAGGCCACCACAAAGCCACATCCATTACGAGCCCAGCTTTTTaGGGCCGTCCAGGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQDLVYIRQAGHHKATSITSPAF*GRPGAA Trigger: TGCTGCCCCTGGACGGCCTCAAAAAGCTGGGCTCGT...AATGGATGTGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGATGAACTGCACCGCCTaGTTCATCCGGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MEIPGCASSASWMRCVLRMNCTA*FIRRCC Trigger: GCAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCAT...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCTCCCAGGTAGACTTCCCCACTCAGCATACTCTGCCTCTTCCTTCTATATGAACTGCACCGCCTaGTTCATCCGGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESLPGRLPHSAYSASSFYMNCTA*FIRRCC Trigger: GCAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCAT...ATAGAAGGAAGAGGCAGAGTATGCTGAGTGGGGAAGTCTACCTGGGAGACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCTTCCCAGCACACTaGCAAGACACTAAAATCATG | + |
|
Preference number: 4 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTSFPAH*QDTKIM Trigger: CATGATTTTAGTGTCTTGCCAGTGTGCTGGGAAGGA...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGACCTTGTGTACATTAGACAAGCAGGCCACCACAAAGCCACATCCATTTCCTTGTGGATGAACTaGACCGCCTGCTTCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TQDLVYIRQAGHHKATSISLWMN*TACFIR Trigger: CCGGATGAAGCAGGCGGTGCAGTTCATCCACAAGGA...AATGGATGTGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTCCAACTACTTTGAGATaGCGTGGTAGAGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTPTTLR*RGRESF Trigger: AAAGCTTTCTCTACCACGGCATCTCAAAGTAGTTGG...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | TCAGCATACTCTGCCTCTTCCTTCTATTCTGGACTACTGTGGTTTTTATTTTTCTTCATCCGGCGCTGCTaGCGCAGGGACGCCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAYSASSFYSGLLWFLFFFIRRC*RRDAAS Trigger: GGAAGCGGCGTCCCTGCGGCAGCAGCGCCGGATGAA...GAAAAATAAAAACCACAGTAGTCCAGAATAGAAGGAAGAGGCAGAGTATGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR CCA 90 bp | GAGAGACTGTTTCATCTTTGTAGCCTGTTTTTGCACCCTCTCATCTTCCCTGTGTCGGCTGAGTCCTTGTaGATGAACTGCACCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERLFHLCSLFLHPLIFPVSAESL*MNCTAC Trigger: GCAGGCGGTGCAGTTCATCCACAAGGACTCAGCCGA...CACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTACACAGGCTGAGGAGATaGGATTATATTGACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WMRCVLRSETGLLLPRDLHRLRR*DYIDSQ Trigger: CTGGCTGTCAATATAATCTCATCTCCTCAGCCTGTG...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | CTCTCTATCTCTAGTGCTGTGATGGAACCCAGGACCTaGTGTACATTAGACAAGCAGGCCACCACAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSISSAVMEPRT*CTLDKQATTKP Trigger: TGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGTTCCATCACAGCACTAGAGATAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | GCTTATGAAGCAAGCACTCTTAATAAACAAGCCATCTCTCTATCTCTAGTGCTGTGCGGCCGCCCTCGGTaGGGAGTCCTGAGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: AYEASTLNKQAISLSLVLCGRPR*GVLSKT Trigger: TGTTTTACTCAGGACTCCTCACCGAGGGCGGCCGCA...CAGCACTAGAGATAGAGAGATGGCTTGTTTATTAAGAGTGCTTGCTTCATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033331.7 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTATCTGTCCACACAGGCTaGGGAGATGAGATTATATTG | + |
|
Preference number: 4 (lower is better) Translates to: WMRCVLRSETGLLLPRDLSVHTG*GDEIIL Trigger: CAATATAATCTCATCTCCTCAGCCTGTGTGGACAGA...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGACCTTGTGTACATTAGACAAGCAGGCCACCACAAAGCCACATCCATTGGAGAGAACCCACTGTaGTCATTAGGTGCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TQDLVYIRQAGHHKATSIGENPL*SLGAQS Trigger: AGATTGAGCACCTAATGATCACAGTGGGTTCTCTCC...AATGGATGTGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | AGAGACTGTTTCATCTTTGTAGCCTGTTTTTGCACCCTCTCATCTTCCCTGTGGTCCATGAGGCGCCTCTaGAGAATGTTATGGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDCFIFVACFCTLSSSLWSMRRL*RMLWGC Trigger: GCAACCCCATAACATTCTGCAGAGGCGCCTCATGGA...CCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGCCCACAATCAGCCGGTaGTTGTCCAAGTTTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: MEIPGCASSASWMRCVLRPTISR*LSKFMM Trigger: CATCATAAACTTGGACAAGCACCGGCTGATTGTGGG...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR CCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTATCCTTCCCAGCACACTaGCAAGACACTAAAATCATG | + |
|
Preference number: 4 (lower is better) Translates to: WMRCVLRSETGLLLPRDLSFPAH*QDTKIM Trigger: CATGATTTTAGTGTCTTGCCAGTGTGCTGGGAAGGA...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR CCA 90 bp | GCACCTGTGCACACTCACAGAGGCCAGAGGAACATGTGGGTGTCATGTCATCTAATTAGGTGCTCAATCTaGCCAACTACTTTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: APVHTHRGQRNMWVSCHLIRCSI*PTTLRC Trigger: GCATCTCAAAGTAGTTGGCCAGATTGAGCACCTAAT...TAGATGACATGACACCCACATGTTCCTCTGGCCTCTGTGAGTGTGCACAGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | GGGTGTCATGTCATCTATTCCTCTACCACACTTCACTaGGTTCCTTTAAGGCAAGGACTCTGGAGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCHVIYSSTTLH*VPLRQGLWRHS Trigger: GGAGTGTCTCCAGAGTCCTTGCCTTAAAGGAACCAAGTGAAGTGTGGTAGAGGAATAGATGACATGACACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR CCA 90 bp | GCTTATGAAGCAAGCACTCTTAATAAACAAGCCATCTCTCTATCTCTAGTGCTGTCGGCTGAGTCCTTGTaGATGAACTGCACCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AYEASTLNKQAISLSLVLSAESL*MNCTAC Trigger: GCAGGCGGTGCAGTTCATCCACAAGGACTCAGCCGA...CAGCACTAGAGATAGAGAGATGGCTTGTTTATTAAGAGTGCTTGCTTCATAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR CCA 90 bp | GTCCTTAGGGGTAATCAATATCCCACAGGGACAACTACATTGTCAGTGGTGTCTTCAACCACAGCTGCTTaGCAATCCAGACGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLRGNQYPTGTTTLSVVSSTTAA*QSRRRE Trigger: TTCTCTCCGTCTGGATTGCCAAGCAGCTGTGGTTGA...AGACACCACTGACAATGTAGTTGTCCCTGTGGGATATTGATTACCCCTAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTAGAGATGAGATTATATTaGCAGCCAGTGTCAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WMRCVLRSETGLLLPRDLEMRLY*QPVSTK Trigger: TTTGGTTGACACTGGCTGTCAATATAATCTCATCTC...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | GAGAGACTGTTTCATCTTTGTAGCCTGTTTTTGCACCCTCTCATCTTCCCTGTGCACAGGCTGAGGAGATaGGATTATATTGACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERLFHLCSLFLHPLIFPVHRLRR*DYIDSQ Trigger: CTGGCTGTCAATATAATCTCATCTCCTCAGCCTGTG...CACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGCCAACTACTTTGAGATaGCGTGGTAGAGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MEIPGCASSASWMRCVLRPTTLR*RGRESF Trigger: AAAGCTTTCTCTACCACGGCATCTCAAAGTAGTTGG...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | CACAGGGACAACTACATTGTCAGTGGTGTCTCAGGAACTAATAATATGCCTTCCGGAGAGAACCCACTGTaGTCATTAGGTGCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HRDNYIVSGVSGTNNMPSGENPL*SLGAQS Trigger: AGATTGAGCACCTAATGATCACAGTGGGTTCTCTCC...GGAAGGCATATTATTAGTTCCTGAGACACCACTGACAATGTAGTTGTCCCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAACTACATTGTCAGTGGTGTCTCAGGAACTAATAATATGCCTTCCCCCACAATCAGCCGGTaGTTGTCCAAGTTTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HRDNYIVSGVSGTNNMPSPTISR*LSKFMM Trigger: CATCATAAACTTGGACAAGCACCGGCTGATTGTGGG...GGAAGGCATATTATTAGTTCCTGAGACACCACTGACAATGTAGTTGTCCCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | GCTGGAAAACAAAGAAAGCAGCATAAGAGCCTTGGTTaGGATATCAGGTCTGGATTCTGCTTGTCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGKQRKQHKSLG*DIRSGFCLSSA Trigger: GGCAGAAGACAAGCAGAATCCAGACCTGATATCCAAACCAAGGCTCTTATGCTGCTTTCTTTGTTTTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | TCAGCATACTCTGCCTCTTCCTTCTATTCTGGACTACTGTGGTTTTTATTTTTCTCCATGAGGCGCCTCTaGAGAATGTTATGGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAYSASSFYSGLLWFLFFSMRRL*RMLWGC Trigger: GCAACCCCATAACATTCTGCAGAGGCGCCTCATGGA...GAAAAATAAAAACCACAGTAGTCCAGAATAGAAGGAAGAGGCAGAGTATGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | TTCATTGAGAGACTGTTTCATCTTTGTAGCCTGTTTTaGCACCCTCTCATCTTCCCTGTGGTGTGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIERLFHLCSLF*HPLIFPVVCVH Trigger: ATGGACACACACCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCTCAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | GTCCTTAGGGGTAATCAATATCCCACAGGGACAACTACATTGTCAGTGGTGTCTCCTTCAGACTTAGCCTaGTTGAATTTGTTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLRGNQYPTGTTTLSVVSPSDLA*LNLLVL Trigger: TAAGACCAACAAATTCAATCAGGCTAAGTCTGAAGG...AGACACCACTGACAATGTAGTTGTCCCTGTGGGATATTGATTACCCCTAAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCAAAATCAATGCCTCTTTCAAGAACCTGAGAAGTCCTGGCCTTACTGGCCTTCAGACTTAGCCTaGTTGAATTTGTTGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGQNQCLFQEPEKSWPYWPSDLA*LNLLVL Trigger: TAAGACCAACAAATTCAATCAGGCTAAGTCTGAAGG...CCAGTAAGGCCAGGACTTCTCAGGTTCTTGAAAGAGGCATTGATTTTGGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR GCA 90 bp | CACAGGGACAACTACATTGTCAGTGGTGTCTCAGGAACTAATAATATGCCTTCCACTGTGATCATTAGGTaGTCAATCTGGCCAACTACT | + |
|
Preference number: 4 (lower is better) Translates to: HRDNYIVSGVSGTNNMPSTVIIR*SIWPTT Trigger: AGTAGTTGGCCAGATTGAGCACCTAATGATCACAGT...GGAAGGCATATTATTAGTTCCTGAGACACCACTGACAATGTAGTTGTCCCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | ACTGGAGGGAAGGACTTGGTCCATAGCAAGTTGCTATaGTATTTAGTTCAAACCCAGTTTTCTCAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGGKDLVHSKLL*YLVQTQFSQSV Trigger: GACAGACTGAGAAAACTGGGTTTGAACTAAATACAATAGCAACTTGCTATGGACCAAGTCCTTCCCTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | GGATGTACTGGAGGGAAGGACTTGGTCCATAGCAAGTaGCTATTGTATTTAGTTCAAACCCAGTTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCTGGKDLVHSK*LLYLVQTQFSQ Trigger: CTGAGAAAACTGGGTTTGAACTAAATACAATAGCAACTTGCTATGGACCAAGTCCTTCCCTCCAGTACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| CDS-3UTR TCA 90 bp | GCTTATGAAGCAAGCACTCTTAATAAACAAGCCATCTCTCTATCTCTAGTGCTGTCTGTCCACACAGGCTaGGGAGATGAGATTATATTG | + |
|
Preference number: 4 (lower is better) Translates to: AYEASTLNKQAISLSLVLSVHTG*GDEIIL Trigger: CAATATAATCTCATCTCCTCAGCCTGTGTGGACAGA...CAGCACTAGAGATAGAGAGATGGCTTGTTTATTAAGAGTGCTTGCTTCATAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | TTAAGGCTGGAAAACAAAGAAAGCAGCATAAGAGCCTaGGTTTGGATATCAGGTCTGGATTCTGCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLENKESSIRA*VWISGLDSACL Trigger: AAGACAAGCAGAATCCAGACCTGATATCCAAACCAAGGCTCTTATGCTGCTTTCTTTGTTTTCCAGCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
||
| 3UTR CAA 72 bp | CTTAGGGGTAATCAATATCCCACAGGGACAACTACATaGTCAGTGGTGTCTCAGGAACTAATAATATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRGNQYPTGTTT*SVVSQELIICL Trigger: AAGGCATATTATTAGTTCCTGAGACACCACTGACAATGTAGTTGTCCCTGTGGGATATTGATTACCCCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR GCA 90 bp | GCTTATGAAGCAAGCACTCTTAATAAACAAGCCATCTCTCTATCTCTAGTGCTGACTGTGATCATTAGGTaGTCAATCTGGCCAACTACT | + |
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Preference number: 4 (lower is better) Translates to: AYEASTLNKQAISLSLVLTVIIR*SIWPTT Trigger: AGTAGTTGGCCAGATTGAGCACCTAATGATCACAGT...CAGCACTAGAGATAGAGAGATGGCTTGTTTATTAAGAGTGCTTGCTTCATAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR TCA 90 bp | TATGACATGGAGTCCAGTTCACCCATTGGTTCTATTCCCAGATTAGAAAATAACGAGATGAGATTATATTaGCAGCCAGTGTCAACCAAA | + |
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Preference number: 4 (lower is better) Translates to: YDMESSSPIGSIPRLENNEMRLY*QPVSTK Trigger: TTTGGTTGACACTGGCTGTCAATATAATCTCATCTC...GTTATTTTCTAATCTGGGAATAGAACCAATGGGTGAACTGGACTCCATGTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCCGCATGTCTGTCTCCTaGCGGCCGCCCTCGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: AGYLSPFPVPRACQPLLPRMSVS*RPPSVR Trigger: CCTCACCGAGGGCGGCCGCAAGGAGACAGACATGCG...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | TGCTGCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTAGGTCGGCTGAGTCCTaGTGGATGAACTGCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: CCRLPFSLPCTEGLPAFTRSAES*WMNCTA Trigger: GGCGGTGCAGTTCATCCACAAGGACTCAGCCGACCT...AGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GCCGGCTACCTTTCTCCCTTCCCTGTACCGAGGGCTTGCCAGCCTTTACTTCCCCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: AGYLSPFPVPRACQPLLPRSLDR*VSMRRL Trigger: GAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCG...GGGAAGTAAAGGCTGGCAAGCCCTCGGTACAGGGAAGGGAGAAAGGTAGCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTACGCATGTCTGTCTCCTaGCGGCCGCCCTCGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: WMRCVLRSETGLLLPRDLRMSVS*RPPSVR Trigger: CCTCACCGAGGGCGGCCGCAAGGAGACAGACATGCG...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS GCA 90 bp | CGAGTGCTCCGGAGCTTAGACAGGTTGGTTTCCATGAGGCGCCTCTaGAGAATGTTATGGGGTTGCGTGTCCTTGGACGAGCCCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RVLRSLDRLVSMRRL*RMLWGCVSLDEPSF Trigger: AAAGCTGGGCTCGTCCAAGGACACGCAACCCCATAACATTCTGCAGAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCGGAGCACTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | TGGATGCGGTGTGTGTTAAGGAGTGAGACAGGTCTGCTACTTCCCAGGGACTTAAGGTCGGCTGAGTCCTaGTGGATGAACTGCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: WMRCVLRSETGLLLPRDLRSAES*WMNCTA Trigger: GGCGGTGCAGTTCATCCACAAGGACTCAGCCGACCT...TAAGTCCCTGGGAAGTAGCAGACCTGTCTCACTCCTTAACACACACCGCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GCACCTGTGCACACTCACAGAGGCCAGAGGAACATGTGGGTGTCATGTCATCTACGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: APVHTHRGQRNMWVSCHLRSLDR*VSMRRL Trigger: GAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCG...TAGATGACATGACACCCACATGTTCCTCTGGCCTCTGTGAGTGTGCACAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GAAAGTCTCCCAGGTAGACTTCCCCACTCAGCATACTCTGCCTCTTCCTTCTATTGGGGTTGCGTGTCCTaGGACGAGCCCAGCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: ESLPGRLPHSAYSASSFYWGCVS*DEPSFL Trigger: CAAAAAGCTGGGCTCGTCCAAGGACACGCAACCCCA...ATAGAAGGAAGAGGCAGAGTATGCTGAGTGGGGAAGTCTACCTGGGAGACTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS GCA 90 bp | GCTGCTTGGCAATCCAGACGGAGAGAACCCACTGTGATCATTAGGTaGTCAATCTGGCCAACTACTTTGAGATGCCGTGGTAGAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: AAWQSRRREPTVIIR*SIWPTTLRCRGRES Trigger: GCTTTCTCTACCACGGCATCTCAAAGTAGTTGGCCAGATTGAGCACCTAATGATCACAGTGGGTTCTCTCCGTCTGGATTGCCAAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | ATGGAAATCCCTGGATGTGCATCTTCAGCTTCCTGGATGCGGTGTGTGTTAAGGATCAACCACAGCTGCTaGGCAATCCAGACGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: MEIPGCASSASWMRCVLRINHSC*AIQTER Trigger: TCTCTCCGTCTGGATTGCCAAGCAGCTGTGGTTGAT...CCTTAACACACACCGCATCCAGGAAGCTGAAGATGCACATCCAGGGATTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GAAAGTCTCCCAGGTAGACTTCCCCACTCAGCATACTCTGCCTCTTCCTTCTATATCAACCACAGCTGCTaGGCAATCCAGACGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: ESLPGRLPHSAYSASSFYINHSC*AIQTER Trigger: TCTCTCCGTCTGGATTGCCAAGCAGCTGTGGTTGAT...ATAGAAGGAAGAGGCAGAGTATGCTGAGTGGGGAAGTCTACCTGGGAGACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS TCA 90 bp | GATGCCGTGGTAGAGAAAGCTTTTCCCCTTCATGCTTGTGAGATTTaGCATGGTCCTTTAGTCCCAATCTGTCCACACAGGCTGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: DAVVEKAFPLHACEI*HGPLVPICPHRLRR Trigger: TCTCCTCAGCCTGTGTGGACAGATTGGGACTAAAGGACCATGTCAAATCTCACAAGCATGAAGGGGAAAAGCTTTCTCTACCACGGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS CCA 90 bp | CAATCCAGACGGAGAGAACCCACTGTGATCATTAGGTGCTCAATCTaGCCAACTACTTTGAGATGCCGTGGTAGAGAAAGCTTTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: QSRRREPTVIIRCSI*PTTLRCRGRESFSP Trigger: AGGGGAAAAGCTTTCTCTACCACGGCATCTCAAAGTAGTTGGCCAGATTGAGCACCTAATGATCACAGTGGGTTCTCTCCGTCTGGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GAAGAGACAGAAACTGTAAGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAAGACGAGCCCAGCTTTTaGAGGCCGTCCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: EETETVRVVNLAAFKKHQDEPSF*RPSRGS Trigger: GCTGCCCCTGGACGGCCTCAAAAAGCTGGGCTCGTC...TTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCTTACAGTTTCTGTCTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | ACCCAGGACCTTGTGTACATTAGACAAGCAGGCCACCACAAAGCCACATCCATTGGAGATGAGATTATATaGACAGCCAGTGTCAACCAA | + |
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Preference number: 5 (lower is better) Translates to: TQDLVYIRQAGHHKATSIGDEII*TASVNQ Trigger: TTGGTTGACACTGGCTGTCAATATAATCTCATCTCC...AATGGATGTGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | ACCCAGGACCTTGTGTACATTAGACAAGCAGGCCACCACAAAGCCACATCCATTTATGCTTCTGAAGTGTaGTCGTCATTCACAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: TQDLVYIRQAGHHKATSIYASEV*SSFTET Trigger: AGTTTCTGTGAATGACGACAACACTTCAGAAGCATA...AATGGATGTGGCTTTGTGGTGGCCTGCTTGTCTAATGTACACAAGGTCCTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GAAGAGACAGAAACTGTAAGAGTAGTTAACTTGGCAGCATTTAAAAAGCATCAATGGGGTTGCGTGTCCTaGGACGAGCCCAGCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: EETETVRVVNLAAFKKHQWGCVS*DEPSFL Trigger: CAAAAAGCTGGGCTCGTCCAAGGACACGCAACCCCA...TTGATGCTTTTTAAATGCTGCCAAGTTAACTACTCTTACAGTTTCTGTCTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | GAGAGACTGTTTCATCTTTGTAGCCTGTTTTTGCACCCTCTCATCTTCCCTGTGGGAGATGAGATTATATaGACAGCCAGTGTCAACCAA | + |
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Preference number: 5 (lower is better) Translates to: ERLFHLCSLFLHPLIFPVGDEII*TASVNQ Trigger: TTGGTTGACACTGGCTGTCAATATAATCTCATCTCC...CACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS-3UTR CAA 90 bp | AGAGACTGTTTCATCTTTGTAGCCTGTTTTTGCACCCTCTCATCTTCCCTGTGGTATGCTTCTGAAGTGTaGTCGTCATTCACAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: RDCFIFVACFCTLSSSLWYASEV*SSFTET Trigger: AGTTTCTGTGAATGACGACAACACTTCAGAAGCATA...CCACAGGGAAGATGAGAGGGTGCAAAAACAGGCTACAAAGATGAAACAGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS CAA 90 bp | CGGCGCTGCTGCCGCAGGGACGCCGCTTCCCGCATGTCTGTCTCCTaGCGGCCGCCCTCGGTGAGGAGTCCTGTCCACGCCGCGGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: RRCCRRDAASRMSVS*RPPSVRSPVHAAAD Trigger: ATCGGCCGCGGCGTGGACAGGACTCCTCACCGAGGGCGGCCGCAAGGAGACAGACATGCGGGAAGCGGCGTCCCTGCGGCAGCAGCGCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041460.13 |
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| CDS CAA 72 bp | TGCCGCAGGGACGCCGCTTCCCGCATGTCTGTCTCCTaGCGGCCGCCCTCGGTGAGGAGTCCTGTCCACGCC | + |
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Preference number: 6 (lower is better) Translates to: CRRDAASRMSVS*RPPSVRSPVHA Trigger: GGCGTGGACAGGACTCCTCACCGAGGGCGGCCGCAAGGAGACAGACATGCGGGAAGCGGCGTCCCTGCGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041460.13 |
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| CDS GCA 72 bp | TGGATGAACTGCACCGCCTGCTTCATCCGGCGCTGCTaGCGCAGGGACGCCGCTTCCCGCATGTCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: WMNCTACFIRRC*RRDAASRMSVS Trigger: GGAGACAGACATGCGGGAAGCGGCGTCCCTGCGGCAGCAGCGCCGGATGAAGCAGGCGGTGCAGTTCATCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 ENSMUST00000207400.2 |
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| CDS CAA 72 bp | GCCCAAGGGACACGAGTGCTCCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTCGTGTCCTTGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: AQGTRVLRSLDR*VSMRRLVSLDE Trigger: CTCGTCCAAGGACACGAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCGGAGCACTCGTGTCCCTTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207400.2 |
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| CDS CAA 90 bp | GTCTTAGAGGCCCAAGGGACACGAGTGCTCCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTCGTGTCCTTGGACGAGCCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VLEAQGTRVLRSLDR*VSMRRLVSLDEPSF Trigger: AAAGCTGGGCTCGTCCAAGGACACGAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCGGAGCACTCGTGTCCCTTGGGCCTCTAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207400.2 |
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| CDS CAA 90 bp | GTCTTAGAGGCCCAAGGGACACGAGTGCTCCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTCTGCAGAATGTTATGGGGTTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VLEAQGTRVLRSLDR*VSMRRLCRMLWGCV Trigger: CACGCAACCCCATAACATTCTGCAGAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCGGAGCACTCGTGTCCCTTGGGCCTCTAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS CAA 72 bp | GCCCAAGGGACACGAGTGCTCCGGAGCTTAGACAGGTaGGTTTCCATGAGGCGCCTCTGCAGAATGTTATGG | + |
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Preference number: 6 (lower is better) Translates to: AQGTRVLRSLDR*VSMRRLCRMLW Trigger: CCATAACATTCTGCAGAGGCGCCTCATGGAAACCAACCTGTCTAAGCTCCGGAGCACTCGTGTCCCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS GCA 72 bp | CAATCCAGACGGAGAGAACCCACTGTGATCATTAGGTaGTCAATCTGGCCAACTACTTTGAGATGCCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: QSRRREPTVIIR*SIWPTTLRCRG Trigger: ACCACGGCATCTCAAAGTAGTTGGCCAGATTGAGCACCTAATGATCACAGTGGGTTCTCTCCGTCTGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS CCA 72 bp | CGGAGAGAACCCACTGTGATCATTAGGTGCTCAATCTaGCCAACTACTTTGAGATGCCGTGGTAGAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RREPTVIIRCSI*PTTLRCRGRES Trigger: GCTTTCTCTACCACGGCATCTCAAAGTAGTTGGCCAGATTGAGCACCTAATGATCACAGTGGGTTCTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS GCA 72 bp | ATCATTAGGTGCTCAATCTGGCCAACTACTTTGAGATaGCGTGGTAGAGAAAGCTTTTCCCCTTCATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: IIRCSIWPTTLR*RGRESFSPSCL Trigger: CAAGCATGAAGGGGAAAAGCTTTCTCTACCACGGCATCTCAAAGTAGTTGGCCAGATTGAGCACCTAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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| CDS CAA 72 bp | ACTGTGATCATTAGGTGCTCAATCTGGCCAACTACTTaGAGATGCCGTGGTAGAGAAAGCTTTTCCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TVIIRCSIWPTT*RCRGRESFSPS Trigger: TGAAGGGGAAAAGCTTTCTCTACCACGGCATCTCAAAGTAGTTGGCCAGATTGAGCACCTAATGATCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033331.7 ENSMUST00000041460.13 |
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