Pregenerated sensors for NRIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001520Ensembl transcript IDs: ENSMUST00000001561.12, ENSMUST00000120405.4, ENSMUST00000123867.8, ENSMUST00000147155.8, ENSMUST00000204836.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGACCAGTCAGACACCCAGACATCTGCCACCCAGAAAGGCTACTaGCCGCAGGCCCTCAGCTCAGGGGCTGTACCTTCTAGACCAAGT | + |
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Preference number: 1 (lower is better) Translates to: ADQSDTQTSATQKGY*PQALSSGAVPSRPS Trigger: ACTTGGTCTAGAAGGTACAGCCCCTGAGCTGAGGGCCTGCGGTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCTGACTGGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR GCA 90 bp | ACTCCACGGTCCAGGTCAATGCAGCACTTGAGGGAGAGCAGGGTCTaGAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCACCTGG | + |
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Preference number: 1 (lower is better) Translates to: TPRSRSMQHLRESRV*SPRQNSGLSTSTTW Trigger: CCAGGTGGTGGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGCTGCATTGACCTGGACCGTGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR TCA 90 bp | CCACCCAGCTGTAAGCAGATGGGTACAGGATTAAAGGGGCATGTGTaGGGAAGGCCAGGTTGGGATGGGCTTCAGGCCAGTGGAGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: PPSCKQMGTGLKGHV*GRPGWDGLQASGGS Trigger: ACTGCCTCCACTGGCCTGAAGCCCATCCCAACCTGGCCTTCCTCACACATGCCCCTTTAATCCTGTACCCATCTGCTTACAGCTGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR GCA 90 bp | TGGAGCAGTAGGAGGCAGACTGGGAGGGACATTGTCTCAAAGCGCTaGAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCC | + |
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Preference number: 1 (lower is better) Translates to: WSSRRQTGRDIVSKR*NEGGVRKETRNPTP Trigger: GGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAATGTCCCTCCCAGTCTGCCTCCTACTGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR TCA 90 bp | ATGAAGAAGCAGAGAGGGAGGTGGCCAACTGCGGGGTCAGGGTGGTaGGAAAAGAAATTAATGCAGTGGTCTCCAGATGCCCTGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: MKKQRGRWPTAGSGW*EKKLMQWSPDALLR Trigger: CCTGAGCAGGGCATCTGGAGACCACTGCATTAATTTCTTTTCTCACCACCCTGACCCCGCAGTTGGCCACCTCCCTCTCTGCTTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR GCA 90 bp | AGGGCAGAAGGCAGCAATGAAGAAGCAGAGAGGGAGGTGGCCAACTaGGGGGTCAGGGTGGTGAGAAAAGAAATTAATGCAGTGGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RAEGSNEEAEREVAN*GVRVVRKEINAVVS Trigger: GGAGACCACTGCATTAATTTCTTTTCTCACCACCCTGACCCCGCAGTTGGCCACCTCCCTCTCTGCTTCTTCATTGCTGCCTTCTGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR TCA 90 bp | GTTTGGGTTAGATATATCATTGTCTCTCTTCCCCTAACCACGATTTaGGAGGCTGACCAGTCAGACACCCAGACATCTGCCACCCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VWVRYIIVSLPLTTI*EADQSDTQTSATQK Trigger: TTTCTGGGTGGCAGATGTCTGGGTGTCTGACTGGTCAGCCTCTCAAATCGTGGTTAGGGGAAGAGAGACAATGATATATCTAACCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCAGTTGGTGGCTCAGGTaGCACATCCCCACCGGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RESRVCSPRQNSGLSTSTSWWLR*HIPTGG Trigger: GCCCCCGGTGGGGATGTGGCACCTGAGCCACCAACT...GGTGGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR CAA 90 bp | TGTCGCCCTAGGGACTGGCTGAGACAGTGGTCACTGGCCAGGTTCTaGGTACAGAGGCAGGAAGGGCAGCTCCGAGAAGGGGGCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: CRPRDWLRQWSLARF*VQRQEGQLREGGFQ Trigger: CTGAAAGCCCCCTTCTCGGAGCTGCCCTTCCTGCCTCTGTACCAAGAACCTGGCCAGTGACCACTGTCTCAGCCAGTCCCTAGGGCGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCAGCTCCGAGAAGGGGGCTTTCAGCCGAAGCACTCCACGGTCCAGGTCGCCACTCGAAGCATCTaGTCCTGGCACTTGCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: EGQLREGGFQPKHSTVQVATRSI*SWHLQL Trigger: CAACTGCAAGTGCCAGGACCAGATGCTTCGAGTGGC...GACCTGGACCGTGGAGTGCTTCGGCTGAAAGCCCCCTTCTCGGAGCTGCCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR CAA 90 bp | GGGGCTTTCAGCCGAAGCACTCCACGGTCCAGGTCAATGCAGCACTaGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GAFSRSTPRSRSMQH*RESRVCSPRQNSGL Trigger: CAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGCTGCATTGACCTGGACCGTGGAGTGCTTCGGCTGAAAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR CAA 90 bp | CCTGTGTCCACAGCCACTCGAAGCATCTGGTCCTGGCACTTGCAGTaGACTAGCAGAGCTGGAACCTGTGTCGCACTGGTCCTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PVSTATRSIWSWHLQ*TSRAGTCVALVLLL Trigger: CAGCAGCAGGACCAGTGCGACACAGGTTCCAGCTCTGCTAGTCAACTGCAAGTGCCAGGACCAGATGCTTCGAGTGGCTGTGGACACAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCTCCAGCTGTTCTACCTaGGTTGGTGGCTCAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RESRVCSPRQNSGLSTSTSSCST*VGGSGA Trigger: GGCACCTGAGCCACCAACTCAGGTAGAACAGCTGGA...GGTGGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGTGGTCACTGGCCAGGTTCTTGGTACAGAGGCAGGAAGGGCAGCTCCGTTCTACCTGAGTTGGTaGCTCAGGTGCCACATCCCC | + |
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Preference number: 2 (lower is better) Translates to: ETVVTGQVLGTEAGRAAPFYLSW*LRCHIP Trigger: GGGGATGTGGCACCTGAGCCACCAACTCAGGTAGAA...CGGAGCTGCCCTTCCTGCCTCTGTACCAAGAACCTGGCCAGTGACCACTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCACCTaGGCCGAGCATGCCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: MQHLRESRVCSPRQNSGLSTSTT*AEHATV Trigger: GACTGTGGCATGCTCGGCCCAGGTGGTGGATGTGGA...CAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGCTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACCCTGGCACTTGCAGTTaGCTAGCAGAGCTGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: ALEGEQGLQSQAKFRAVHPGTCS*LAELEP Trigger: AGGTTCCAGCTCTGCTAGTCAACTGCAAGTGCCAGG...GTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR-3UTR CCA 90 bp | AGACACCCAGACATCTGCCACCCAGAAAGGCTACTGACCGCAGGCCCTCAGCTCAGGGATAAGAGAGAATaGGGAACCAGGGCCTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RHPDICHPERLLTAGPQLRDKRE*GTRASE Trigger: CTCTGAGGCCCTGGTTCCCCATTCTCTCTTATCCCT...GAGCTGAGGGCCTGCGGTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTGCGGGGTCAGGGTGGTaGGAAAAGAAATTAATGCAG | + |
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Preference number: 2 (lower is better) Translates to: AAMREESGKRPGTPLPEPAGSGW*EKKLMQ Trigger: CTGCATTAATTTCTTTTCTCACCACCCTGACCCCGC...AGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR CAA 90 bp | GCCCTCAGCTCAGGGGCTGTACCTTCTAGACCAAGTCCTACTTACTaGTCACCCCCACCCAGCTGTAAGCAGATGGGTACAGGATTAAAG | + |
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Preference number: 2 (lower is better) Translates to: ALSSGAVPSRPSPTY*SPPPSCKQMGTGLK Trigger: CTTTAATCCTGTACCCATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTACAGCCCCTGAGCTGAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR CAA 90 bp | TGGTCTGCCTTTAATGGAGCAGTAGGAGGCAGACTGGGAGGGACATaGTCTCAAAGCGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: WSAFNGAVGGRLGGT*SQSAAMREESGKRP Trigger: TGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAATGTCCCTCCCAGTCTGCCTCCTACTGCTCCATTAAAGGCAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR-3UTR TCA 90 bp | GACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGCCTCTACAGCCAGGGTaGAGTCTAGAGCCCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: DQEPHSQSLSKVKKVKKVPLQPG*SLEPIC Trigger: GCAAATGGGCTCTAGACTTCACCCTGGCTGTAGAGG...CACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR-3UTR TCA 90 bp | ACATTGTCTCAAAGCGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCTTAAAGGGGCATGTGTaGGGAAGGCCAGGTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TLSQSAAMREESGKRPGTLKGHV*GRPGWD Trigger: ATCCCAACCTGGCCTTCCTCACACATGCCCCTTTAA...GGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGACTTGGTTGTGCACTTaGGAAGGGATAAGAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: RSQERDQEPHSQSLSKVKTWLCT*EGIREN Trigger: ATTCTCTCTTATCCCTTCCCAAGTGCACAACCAAGT...CTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR-3UTR CCA 90 bp | GTAACTTTGACCTCTACAGCCAGGGTGAAGTCTAGAGCCCATTTGCTGGAGGTCAAGAAATTAATGCAGTaGTCTCCAGATGCCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: VTLTSTARVKSRAHLLEVKKLMQ*SPDALL Trigger: GAGCAGGGCATCTGGAGACCACTGCATTAATTTCTT...GACCTCCAGCAAATGGGCTCTAGACTTCACCCTGGCTGTAGAGGTCAAAGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR CAA 90 bp | AGTGAAGAAAGTGAAGAAAGTGACACTTTCTATGCTGGTTCCTCTTaGGTCTACCATAGGCTTATAGGCTTTGTATTTAGTTCCCATGTA | + |
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Preference number: 2 (lower is better) Translates to: SEESEESDTFYAGSS*VYHRLIGFVFSSHV Trigger: TACATGGGAACTAAATACAAAGCCTATAAGCCTATGGTAGACCAAAGAGGAACCAGCATAGAAAGTGTCACTTTCTTCACTTTCTTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR TCA 72 bp | GTCTCCTGCCCCAGCTCTAACTCCAGCTGTTCTACCTaGGTTGGTGGCTCAGGTGCCACATCCCCACCGGGG | + |
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Preference number: 3 (lower is better) Translates to: VSCPSSNSSCST*VGGSGATSPPG Trigger: CCCCGGTGGGGATGTGGCACCTGAGCCACCAACTCAGGTAGAACAGCTGGAGTTAGAGCTGGGGCAGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR TCA 72 bp | TCAGACACCCAGACATCTGCCACCCAGAAAGGCTACTaGCCGCAGGCCCTCAGCTCAGGGGCTGTACCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SDTQTSATQKGY*PQALSSGAVPS Trigger: AGAAGGTACAGCCCCTGAGCTGAGGGCCTGCGGTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR TCA 72 bp | GGGCTTTTGGGACCCTCTTTCCTAACCCCAGGCGCCTaGGACATCCAGCAGAAATCTGGTTGTGCTGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GLLGPSFLTPGA*DIQQKSGCAGS Trigger: GGACCCAGCACAACCAGATTTCTGCTGGATGTCTCAGGCGCCTGGGGTTAGGAAAGAGGGTCCCAAAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR TCA 72 bp | GCAGACTGGGAGGGACATTGTCTCAAAGCGCTGCAATaGGGGAGGAGTCAGGAAAGAGACCAGGAACCCCAC | + |
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Preference number: 3 (lower is better) Translates to: ADWEGHCLKALQ*GRSQERDQEPH Trigger: GTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAATGTCCCTCCCAGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR TCA 72 bp | CAGAGAGGGAGGTGGCCAACTGCGGGGTCAGGGTGGTaGGAAAAGAAATTAATGCAGTGGTCTCCAGATGCC | + |
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Preference number: 3 (lower is better) Translates to: QRGRWPTAGSGW*EKKLMQWSPDA Trigger: GGCATCTGGAGACCACTGCATTAATTTCTTTTCTCACCACCCTGACCCCGCAGTTGGCCACCTCCCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR GCA 72 bp | AGGAGGCAGACTGGGAGGGACATTGTCTCAAAGCGCTaGAATGAGGGAGGAGTCAGGAAAGAGACCAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: RRQTGRDIVSKR*NEGGVRKETRN Trigger: GTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAATGTCCCTCCCAGTCTGCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR-3UTR CAA 90 bp | GCTTTTGGGACCCTCTTTCCTAACCCCAGGCGCCTGAGACATCCAGCAGAAATCATCTGGTCCTGGCACTaGCAGTTGACTAGCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: AFGTLFPNPRRLRHPAEIIWSWH*QLTSRA Trigger: AGCTCTGCTAGTCAACTGCAAGTGCCAGGACCAGAT...GATTTCTGCTGGATGTCTCAGGCGCCTGGGGTTAGGAAAGAGGGTCCCAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| 3UTR CCA 72 bp | GACTTGGTTGTGCACTTGGGAAGGGATAAGAGAGAATaGGGAACCAGGGCCTCAGAGTCACAGATACTCTCG | + |
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Preference number: 3 (lower is better) Translates to: DLVVHLGRDKRE*GTRASESQILS Trigger: CGAGAGTATCTGTGACTCTGAGGCCCTGGTTCCCCATTCTCTCTTATCCCTTCCCAAGTGCACAACCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAATATGCTGGTTCCTCTTaGGTCTACCATAGGCTTATA | + |
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Preference number: 3 (lower is better) Translates to: MREESGKRPGTPLPEPLEYAGSS*VYHRLI Trigger: TATAAGCCTATGGTAGACCAAAGAGGAACCAGCATA...TTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR TCA 72 bp | AGATATATCATTGTCTCTCTTCCCCTAACCACGATTTaGGAGGCTGACCAGTCAGACACCCAGACATCTGCC | + |
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Preference number: 3 (lower is better) Translates to: RYIIVSLPLTTI*EADQSDTQTSA Trigger: GGCAGATGTCTGGGTGTCTGACTGGTCAGCCTCTCAAATCGTGGTTAGGGGAAGAGAGACAATGATATATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| 3UTR GCA 72 bp | GTGGTGAGAAAAGAAATTAATGCAGTGGTCTCCAGATaGCCTGCTCAGGTAATACCCACTCCACACATTCTT | + |
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Preference number: 3 (lower is better) Translates to: VVRKEINAVVSR*PAQVIPTPHIL Trigger: AAGAATGTGTGGAGTGGGTATTACCTGAGCAGGGCATCTGGAGACCACTGCATTAATTTCTTTTCTCACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR CCA 72 bp | TTTGTATTTAGTTCCCATGTAAGGGACCCAGTTCCCTaGTTTGGGTTAGATATATCATTGTCTCTCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: FVFSSHVRDPVP*FGLDISLSLFP Trigger: GGGGAAGAGAGACAATGATATATCTAACCCAAACCAGGGAACTGGGTCCCTTACATGGGAACTAAATACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR GCA 90 bp | CGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCCCACGGATCAGGGCCTaGAGCAGGGGAGACTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RCNEGGVRKETRNPTPRAPRIRA*SRGDSP Trigger: GGGGGAGTCTCCCCTGCTGCAGGCCCTGATCCGTGG...GGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | TGCCACCCAGAAAGGCTACTGACCGCAGGCCCTCAGCTCAGGGGCTGTACCTTCCGCTGCTGGCTCAGGTaGGCTCGGTCCCGAAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: CHPERLLTAGPQLRGCTFRCWLR*ARSRSE Trigger: TTCGCTTCGGGACCGAGCCCACCTGAGCCAGCAGCG...GAAGGTACAGCCCCTGAGCTGAGGGCCTGCGGTCAGTAGCCTTTCTGGGTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR GCA 90 bp | AGACACCCAGACATCTGCCACCCAGAAAGGCTACTGACCGCAGGCCCTCAGCTCAGTTGGTGGCTCAGGTaGCACATCCCCACCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RHPDICHPERLLTAGPQLSWWLR*HIPTGG Trigger: GCCCCCGGTGGGGATGTGGCACCTGAGCCACCAACT...GAGCTGAGGGCCTGCGGTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR TCA 90 bp | GAGACAGTGGTCACTGGCCAGGTTCTTGGTACAGAGGCAGGAAGGGCAGCTCCGACTGGGTGGCCTGTTTaGGTTGGCGCTGCTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ETVVTGQVLGTEAGRAAPTGWPV*VGAAGS Trigger: TGAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGT...CGGAGCTGCCCTTCCTGCCTCTGTACCAAGAACCTGGCCAGTGACCACTGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| CDS-3UTR GCA 90 bp | GCTTTTGGGACCCTCTTTCCTAACCCCAGGCGCCTGAGACATCCAGCAGAAATCCCACGGATCAGGGCCTaGAGCAGGGGAGACTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: AFGTLFPNPRRLRHPAEIPRIRA*SRGDSP Trigger: GGGGGAGTCTCCCCTGCTGCAGGCCCTGATCCGTGG...GATTTCTGCTGGATGTCTCAGGCGCCTGGGGTTAGGAAAGAGGGTCCCAAAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGGTGCCGAGTCTCTTaGGGCTGTCCAGGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: MREESGKRPGTPLPEPLERCRVS*GCPGAA Trigger: TGCTGCCCCTGGACAGCCTCAAGAGACTCGGCACCT...TTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | AGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCACCTGGGCCACACTGTGTGGCTGCTaGCAGGTCCTTAGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RVCSPRQNSGLSTSTTWATLCGC*QVLRGA Trigger: GGCACCTCTAAGGACCTGCCAGCAGCCACACAGTGT...GGCCCAGGTGGTGGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| CDS-3UTR TCA 90 bp | CAGACACCCAGACATCTGCCACCCAGAAAGGCTACTGACCGCAGGCCCTCAGCTCCTGGCACTTGCAGTTaGCTAGCAGAGCTGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: QTPRHLPPRKATDRRPSAPGTCS*LAELEP Trigger: AGGTTCCAGCTCTGCTAGTCAACTGCAAGTGCCAGG...AGCTGAGGGCCTGCGGTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR TCA 90 bp | AGCAATGAAGAAGCAGAGAGGGAGGTGGCCAACTGCGGGGTCAGGGTGGTGAGAGGTCAATGCAGCACTTaGGGGAGAGCAGGGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SNEEAEREVANCGVRVVRGQCST*GRAGSA Trigger: TGCAGACCCTGCTCTCCCTCAAGTGCTGCATTGACC...TCTCACCACCCTGACCCCGCAGTTGGCCACCTCCCTCTCTGCTTCTTCATTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| CDS-3UTR GCA 90 bp | GACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGCCACGGATCAGGGCCTaGAGCAGGGGAGACTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DQEPHSQSLSKVKKVKKVPRIRA*SRGDSP Trigger: GGGGGAGTCTCCCCTGCTGCAGGCCCTGATCCGTGG...CACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCTCTCTCCTGGCCTCTTaGCCGGTGCTCATGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RESRVCSPRQNSGLSTSTSLLAS*PVLMVF Trigger: GAAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGA...GGTGGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCAGCTCAGGGGCTGTACCTTCTAGACCAAGTCCTACTTACTTGTCACCCACTGGGTGGCCTGTTTaGGTTGGCGCTGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSSGAVPSRPSPTYLSPTGWPV*VGAAGS Trigger: TGAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGT...GGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTACAGCCCCTGAGCTGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR TCA 90 bp | GCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTCTAACCCCAGGCGCCTaGGACATCCAGCAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AAMREESGKRPGTPLPEPLTPGA*DIQQKS Trigger: AGATTTCTGCTGGATGTCTCAGGCGCCTGGGGTTAG...AGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR TCA 90 bp | GAGAGGCTGACCAGTCAGACACCCAGACATCTGCCACCCAGAAAGGCTACTGACTCCAGCTGTTCTACCTaGGTTGGTGGCTCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLTSQTPRHLPPRKATDSSCST*VGGSGA Trigger: GGCACCTGAGCCACCAACTCAGGTAGAACAGCTGGA...GTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCTGACTGGTCAGCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR GCA 90 bp | GCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTATCACACTGTGTGGCTaGAGGTCCTTAGAGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AAMREESGKRPGTPLPEPITLCG*RSLEVP Trigger: CGGCACCTCTAAGGACCTGCAGCCACACAGTGTGAT...AGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR GCA 90 bp | GTACCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGAGTTGGTGGCTCAGGTaGCACATCCCCACCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSRPSPTYLSPPPSCKQSWWLR*HIPTGG Trigger: GCCCCCGGTGGGGATGTGGCACCTGAGCCACCAACT...CTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTCAATGCAGCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATCTCCCTCATCTCTCCTaGCCTCTTGCCCGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSMQHLRESRVCSPRQNLPHLS*PLARCS Trigger: TGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAG...ATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGCTGCATTGACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACTCCACCAGGCGTCTTTaGATCACACTGTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALEGEQGLQSQAKFRAVHSTRRL*ITLCGC Trigger: GCAGCCACACAGTGTGATCCAAAGACGCCTGGTGGA...GTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTGAAATCTGGTTGTGCTaGGTCCCTGTGTCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAMREESGKRPGTPLPEPEIWLC*VPVSTA Trigger: GGCTGTGGACACAGGGACCCAGCACAACCAGATTTC...AGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | GCAGTAGGAGGCAGACTGGGAGGGACATTGTCTCAAAGCGCTGCAATGAGGGAGCACTGGCCAGGTTCTTaGTACAGAGGCAGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVGGRLGGTLSQSAAMREHWPGS*YRGRKG Trigger: GCCCTTCCTGCCTCTGTACCAAGAACCTGGCCAGTG...CTCCCTCATTGCAGCGCTTTGAGACAATGTCCCTCCCAGTCTGCCTCCTACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
||
| 3UTR CAA 72 bp | AGCCGAAGCACTCCACGGTCCAGGTCAATGCAGCACTaGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRSTPRSRSMQH*RESRVCSPRQN Trigger: ATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGCTGCATTGACCTGGACCGTGGAGTGCTTCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTCTCAAAGCGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTGGGTGGCCTGTTTaGGTTGGCGCTGCTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVSKRCNEGGVRKETRNPTGWPV*VGAAGS Trigger: TGAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGT...GGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR GCA 90 bp | AGGTCAATGCAGCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCATGTTTGAGTTGGCGCTaGTGGCTCAGGTGGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSMQHLRESRVCSPRQNSCLSWR*WLRWAR Trigger: CCGAGCCCACCTGAGCCAGCAGCGCCAACTCAAACA...TGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGCTGCATTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCGAGAAGGGGGCTTTCAGCCGAAGCACTCCACGGTCCAGGTCAATGCATCCTTGTGCAAGAACTaGGTGGCCTGTTTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLREGGFQPKHSTVQVNASLCKN*VACLSW Trigger: CCAACTCAAACAGGCCACCCAGTTCTTGCACAAGGA...TGCATTGACCTGGACCGTGGAGTGCTTCGGCTGAAAGCCCCCTTCTCGGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGCTGACCAGTCAGACACCCAGACATCTGCCACCCAGAAAGGCTACTGACTCCACCAGGCGTCTTTaGATCACACTGTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERLTSQTPRHLPPRKATDSTRRL*ITLCGC Trigger: GCAGCCACACAGTGTGATCCAAAGACGCCTGGTGGA...GTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCTGACTGGTCAGCCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | GCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACCTTGCCCGGTGCTCATaGTCTTCTCTGAGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALEGEQGLQSQAKFRAVHLARCS*SSLRSS Trigger: GGAAGATCTCAGAGAAGACCATGAGCACCGGGCAAG...GTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGCCTCTACAGCCAGGGTaGAGTCTAGAGCCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSQERDQEPHSQSLSKVKPLQPG*SLEPIC Trigger: GCAAATGGGCTCTAGACTTCACCCTGGCTGTAGAGG...CTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120405.4 |
||
| CDS-3UTR GCA 90 bp | GTACCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGTGTTTGAGTTGGCGCTaGTGGCTCAGGTGGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSRPSPTYLSPPPSCKQCLSWR*WLRWAR Trigger: CCGAGCCCACCTGAGCCAGCAGCGCCAACTCAAACA...CTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR GCA 90 bp | ATGCAGCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGATCACACTGTGTGGCTaGTGGCAGGTCCTTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MQHLRESRVCSPRQNSGLITLCG*WQVLRG Trigger: ACCTCTAAGGACCTGCCAGCAGCCACACAGTGTGAT...CAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGACACTTTCTCGCTGCTGGCTCAGGTaGGCTCGGTCCCGAAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHSQSLSKVKKVKKVTLSRCWLR*ARSRSE Trigger: TTCGCTTCGGGACCGAGCCCACCTGAGCCAGCAGCG...AGAAAGTGTCACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR TCA 90 bp | CCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGACACTTTCTAGGTGCCGAGTCTCTTaGGGCTGTCCAGGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHSQSLSKVKKVKKVTLSRCRVS*GCPGAA Trigger: TGCTGCCCCTGGACAGCCTCAAGAGACTCGGCACCT...AGAAAGTGTCACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR TCA 90 bp | GTACCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGTCCAGCTGTTCTACCTaGGTTGGTGGCTCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSRPSPTYLSPPPSCKQSSCST*VGGSGA Trigger: GGCACCTGAGCCACCAACTCAGGTAGAACAGCTGGA...CTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR GCA 90 bp | AAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAATGTTTGAGTTGGCGCTaGTGGCTCAGGTGGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KRPGTPLPEPLESEESEECLSWR*WLRWAR Trigger: CCGAGCCCACCTGAGCCAGCAGCGCCAACTCAAACA...TTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR GCA 90 bp | GACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGGGTACAGTCAGCCGAGTCCTTGTaGAAGAACTGGGTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQVLLTCHPHPAVSRWVQSAESL*KNWVAC Trigger: ACAGGCCACCCAGTTCTTGCACAAGGACTCGGCTGA...CTGTACCCATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | AAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAACTCCCTCATCTCTCCTaGCCTCTTGCCCGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRPGTPLPEPLESEESEELPHLS*PLARCS Trigger: TGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAG...TTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | TTGTCTCAAAGCGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCAGCCACTCGAAGCATCTaGTCCTGGCACTTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQSAAMREESGKRPGTPATRSI*SWHLQL Trigger: CAACTGCAAGTGCCAGGACCAGATGCTTCGAGTGGC...TGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | TTGTCTCAAAGCGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCATTCTACCTGAGTTGGTaGCTCAGGTGCCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSAAMREESGKRPGTPFYLSW*LRCHIP Trigger: GGGGATGTGGCACCTGAGCCACCAACTCAGGTAGAA...TGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | CCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGGGTACAGGATTCTACCTGAGTTGGTaGCTCAGGTGCCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPTYLSPPPSCKQMGTGFYLSW*LRCHIP Trigger: GGGGATGTGGCACCTGAGCCACCAACTCAGGTAGAA...TCCTGTACCCATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | TACCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATCCACATCCACCACCTaGGCCGAGCATGCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLLDQVLLTCHPHPAVSRSTSTT*AEHATV Trigger: GACTGTGGCATGCTCGGCCCAGGTGGTGGATGTGGA...TCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | GAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGACACTTCTCCCTCATCTCTCCTaGCCTCTTGCCCGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EPHSQSLSKVKKVKKVTLLPHLS*PLARCS Trigger: TGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAG...AAGTGTCACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CCA 90 bp | CCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGTCCACCAGGCGTCTTTaGATCACACTGTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSRPSPTYLSPPPSCKQMSTRRL*ITLCGC Trigger: GCAGCCACACAGTGTGATCCAAAGACGCCTGGTGGA...CATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | CCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGGCCACTCGAAGCATCTaGTCCTGGCACTTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSRPSPTYLSPPPSCKQMATRSI*SWHLQL Trigger: CAACTGCAAGTGCCAGGACCAGATGCTTCGAGTGGC...CATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAACTGTTCTACCTGAGTTaGTGGCTCAGGTGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: ESGKRPGTPLPEPLESEELFYLS*WLRCHI Trigger: GATGTGGCACCTGAGCCACCAACTCAGGTAGAACAG...TTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| 3UTR CAA 72 bp | TCAGGGGCTGTACCTTCTAGACCAAGTCCTACTTACTaGTCACCCCCACCCAGCTGTAAGCAGATGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SGAVPSRPSPTY*SPPPSCKQMGT Trigger: TGTACCCATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTACAGCCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR TCA 90 bp | AGTTCCCATGTAAGGGACCCAGTTCCCTGGTTTGGGTTAGATATATCATTGTCTGGGAGGTGGCCAACTTaGGGGAGAGCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHVRDPVPWFGLDISLSGRWPT*GRAGSA Trigger: TGCAGACCCTGCTCTCCCTCAAGTTGGCCACCTCCC...AGACAATGATATATCTAACCCAAACCAGGGAACTGGGTCCCTTACATGGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCTGACCAGTCAGACACCCAGACATCTGCCACCCAGAAAGGCTACTGACCTAGAGCCCATTTGCTaGAGGTCCTTTTCTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERLTSQTPRHLPPRKATDLEPIC*RSFSVS Trigger: ACTTACAGAAAAGGACCTCCAGCAAATGGGCTCTAG...GTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCTGACTGGTCAGCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120405.4 |
||
| CDS-3UTR TCA 90 bp | GGACCCAGTTCCCTGGTTTGGGTTAGATATATCATTGTCTCTCTTCCCCTAACCCCTGGCACTTGCAGTTaGCTAGCAGAGCTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GPSSLVWVRYIIVSLPLTPGTCS*LAELEP Trigger: AGGTTCCAGCTCTGCTAGTCAACTGCAAGTGCCAGG...GGTTAGGGGAAGAGAGACAATGATATATCTAACCCAAACCAGGGAACTGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR TCA 90 bp | GAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGACACTTCTAACCCCAGGCGCCTaGGACATCCAGCAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: EPHSQSLSKVKKVKKVTLLTPGA*DIQQKS Trigger: AGATTTCTGCTGGATGTCTCAGGCGCCTGGGGTTAG...AAGTGTCACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR GCA 90 bp | GAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGACACTTTCAGCCGAGTCCTTGTaGAAGAACTGGGTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPHSQSLSKVKKVKKVTLSAESL*KNWVAC Trigger: ACAGGCCACCCAGTTCTTGCACAAGGACTCGGCTGA...AAGTGTCACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR GCA 90 bp | GAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGACACTTATCACACTGTGTGGCTaGAGGTCCTTAGAGGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EPHSQSLSKVKKVKKVTLITLCG*RSLEVP Trigger: CGGCACCTCTAAGGACCTGCAGCCACACAGTGTGAT...AAGTGTCACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | GACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGTTGGATCACACTGTGTaGCTGCAGGTCCTTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQEPHSQSLSKVKKVKKVLDHTV*LQVLRG Trigger: ACCTCTAAGGACCTGCAGCCACACAGTGTGATCCAA...CACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGGTTGGATCACACTGTGTaGCTGCAGGTCCTTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDQVLLTCHPHPAVSRWLDHTV*LQVLRG Trigger: ACCTCTAAGGACCTGCAGCCACACAGTGTGATCCAA...CCATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | TACCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGACTGTTCTACCTGAGTTaGTGGCTCAGGTGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: YLLDQVLLTCHPHPAVSRLFYLS*WLRCHI Trigger: GATGTGGCACCTGAGCCACCAACTCAGGTAGAACAG...TCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGTAAGTGACTTGGTTGTGCACTTGGGAAGGGATAAGAGAGAATGGGGATCCACATCCACCACCTaGGCCGAGCATGCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVSDLVVHLGRDKREWGSTSTT*AEHATV Trigger: GACTGTGGCATGCTCGGCCCAGGTGGTGGATGTGGA...TCCCCATTCTCTCTTATCCCTTCCCAAGTGCACAACCAAGTCACTTACAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGGGATAAGAGAGAATaGGGAACCAGGGCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRPGTPLPEPLESEESEERDKRE*GTRASE Trigger: CTCTGAGGCCCTGGTTCCCCATTCTCTCTTATCCCT...TTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120405.4 |
||
| 3UTR CAA 72 bp | TGGAGGTCCTTTTCTGTAAGTGACTTGGTTGTGCACTaGGGAAGGGATAAGAGAGAATGGGGAACCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRSFSVSDLVVH*GRDKREWGTRA Trigger: GGCCCTGGTTCCCCATTCTCTCTTATCCCTTCCCAAGTGCACAACCAAGTCACTTACAGAAAAGGACCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAATCCTTGTGCAAGAACTaGGTGGCCTGTTTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRPGTPLPEPLESEESEESLCKN*VACLSW Trigger: CCAACTCAAACAGGCCACCCAGTTCTTGCACAAGGA...TTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CCA 90 bp | GTGAGAAAAGAAATTAATGCAGTGGTCTCCAGATGCCCTGCTCAGGTAATACCCGAAATCTGGTTGTGCTaGGTCCCTGTGTCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRKEINAVVSRCPAQVIPEIWLC*VPVSTA Trigger: GGCTGTGGACACAGGGACCCAGCACAACCAGATTTC...GGGTATTACCTGAGCAGGGCATCTGGAGACCACTGCATTAATTTCTTTTCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
||
| CDS-3UTR CCA 90 bp | GGACCCAGTTCCCTGGTTTGGGTTAGATATATCATTGTCTCTCTTCCCCTAACCTCCTTGTGCAAGAACTaGGTGGCCTGTTTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPSSLVWVRYIIVSLPLTSLCKN*VACLSW Trigger: CCAACTCAAACAGGCCACCCAGTTCTTGCACAAGGA...GGTTAGGGGAAGAGAGACAATGATATATCTAACCCAAACCAGGGAACTGGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| 3UTR CAA 72 bp | GAGCCCATTTGCTGGAGGTCCTTTTCTGTAAGTGACTaGGTTGTGCACTTGGGAAGGGATAAGAGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EPICWRSFSVSD*VVHLGRDKREW Trigger: CCATTCTCTCTTATCCCTTCCCAAGTGCACAACCAAGTCACTTACAGAAAAGGACCTCCAGCAAATGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| 3UTR CAA 72 bp | AGTGAAGAAAGTGACACTTTCTATGCTGGTTCCTCTTaGGTCTACCATAGGCTTATAGGCTTTGTATTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SEESDTFYAGSS*VYHRLIGFVFS Trigger: ACTAAATACAAAGCCTATAAGCCTATGGTAGACCAAAGAGGAACCAGCATAGAAAGTGTCACTTTCTTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS TCA 90 bp | CTGTCATGGCCACGGATCAGGGCCTGCAGCAGGGGAGACTCCCCCTaGAGCCGCCTCTGGTTTCCCTCCACCAGGCGTCTTTGGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSWPRIRACSRGDSP*SRLWFPSTRRLWIT Trigger: TGTGATCCAAAGACGCCTGGTGGAGGGAAACCAGAGGCGGCTTCAGGGGGAGTCTCCCCTGCTGCAGGCCCTGATCCGTGGCCATGACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000204836.2 |
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| CDS-3UTR CAA 90 bp | GACATCTGCCACCCAGAAAGGCTACTGACCGCAGGCCCTCAGCTCAGGGGCTGTAACTGGGTGGCCTGTTaGAGTTGGCGCTGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DICHPERLLTAGPQLRGCNWVAC*SWRCWL Trigger: GAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGTT...ACAGCCCCTGAGCTGAGGGCCTGCGGTCAGTAGCCTTTCTGGGTGGCAGATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CAA 90 bp | CGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCAGGGAGGTGGCCAACTaGAGGGAGAGCAGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCNEGGVRKETRNPTPRAREVAN*RESRVC Trigger: GCAGACCCTGCTCTCCCTCAAGTTGGCCACCTCCCT...GGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120405.4 |
||
| CDS GCA 90 bp | GCCGAGTCCTTGTGCAAGAACTGGGTGGCCTGTTTGAGTTGGCGCTaGTGGCTCAGGTGGGCTCGGTCCCGAAGCGAAGCTTCCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AESLCKNWVACLSWR*WLRWARSRSEASCS Trigger: AGAACAGGAAGCTTCGCTTCGGGACCGAGCCCACCTGAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGTTCTTGCACAAGGACTCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000147155.8 |
||
| CDS GCA 90 bp | GAAGAAGCAGAGAGGGAGGTGGCCAACTTGAGGGAGAGCAGGGTCTaGAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EEAEREVANLRESRV*SPRQNSGLSTSTTW Trigger: CCAGGTGGTGGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTTGGCCACCTCCCTCTCTGCTTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120405.4 |
||
| CDS CCA 90 bp | TGCAAGAACTGGGTGGCCTGTTTGAGTTGGCGCTGCTGGCTCAGGTaGGCTCGGTCCCGAAGCGAAGCTTCCTGTTCTTTCCTGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CKNWVACLSWRCWLR*ARSRSEASCSFLES Trigger: AGACTCCAGGAAAGAACAGGAAGCTTCGCTTCGGGACCGAGCCCACCTGAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGTTCTTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000147155.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAGCATCTGGTCCTGGCACTTGCAGTTGACTAGCAGAGCTGGAACCTGTGAGGTGCCGAGTCTCTaGAGGCTGTCCAGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRSIWSWHLQLTSRAGTCEVPSL*RLSRGS Trigger: GCTGCCCCTGGACAGCCTCAAGAGACTCGGCACCTC...ACAGGTTCCAGCTCTGCTAGTCAACTGCAAGTGCCAGGACCAGATGCTTCGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR CAA 90 bp | GCACTTGAGGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACCTCCACCAGGCGTCTTaGGATCACACTGTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALEGEQGLQSQAKFRAVHLHQAS*DHTVWL Trigger: CAGCCACACAGTGTGATCCAAAGACGCCTGGTGGAG...GTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
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| CDS-3UTR CAA 90 bp | GGGAGAGCAGGGTCTGCAGTCCCAGGCAAAATTCAGGGCTGTCCACATCCACCAATCTCTCCTGGCCTCTaGCCCGGTGCTCATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRAGSAVPGKIQGCPHPPISPGL*PGAHGL Trigger: AAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGAT...TGGTGGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS TCA 90 bp | CTGTGTCCACAGCCACTCGAAGCATCTGGTCCTGGCACTTGCAGTTaGCTAGCAGAGCTGGAACCTGTGTCGCACTGGTCCTGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCPQPLEASGPGTCS*LAELEPVSHWSCCC Trigger: ACAGCAGCAGGACCAGTGCGACACAGGTTCCAGCTCTGCTAGTCAACTGCAAGTGCCAGGACCAGATGCTTCGAGTGGCTGTGGACACAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000204836.2 |
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| CDS-3UTR CAA 90 bp | GCTTTTGGGACCCTCTTTCCTAACCCCAGGCGCCTGAGACATCCAGCAGAAATCAACTGGGTGGCCTGTTaGAGTTGGCGCTGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AFGTLFPNPRRLRHPAEINWVAC*SWRCWL Trigger: GAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGTT...GATTTCTGCTGGATGTCTCAGGCGCCTGGGGTTAGGAAAGAGGGTCCCAAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147155.8 |
||
| CDS-3UTR CAA 90 bp | GTACCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGGAGGTGCCGAGTCTCTaGAGGCTGTCCAGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPSRPSPTYLSPPPSCKQEVPSL*RLSRGS Trigger: GCTGCCCCTGGACAGCCTCAAGAGACTCGGCACCTC...CTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CAA 90 bp | CCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGGAGGTGCCGAGTCTCTaGAGGCTGTCCAGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRPSPTYLSPPPSCKQMEVPSL*RLSRGS Trigger: GCTGCCCCTGGACAGCCTCAAGAGACTCGGCACCTC...CATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CAA 90 bp | GAGAGGCTGACCAGTCAGACACCCAGACATCTGCCACCCAGAAAGGCTACTGACTCACTGGCCAGGTTCTaGGTACAGAGGCAGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ERLTSQTPRHLPPRKATDSLARF*VQRQEG Trigger: CCCTTCCTGCCTCTGTACCAAGAACCTGGCCAGTGA...GTCAGTAGCCTTTCTGGGTGGCAGATGTCTGGGTGTCTGACTGGTCAGCCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| CDS CCA 90 bp | TCCTGGAGTCTCCCTCATCTCTCCTGGCCTCTTGCCCGGTGCTCATaGTCTTCTCTGAGATCTTCCCTGTTAGACGCTGAAGTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWSLPHLSWPLARCS*SSLRSSLLDAEVPV Trigger: CACTGGGACTTCAGCGTCTAACAGGGAAGATCTCAGAGAAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAGACTCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123867.8 ENSMUST00000147155.8 |
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| CDS-3UTR CAA 90 bp | ATTGTCTCAAAGCGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCCCAGGTCAGCCGAGTCCTaGTGCAAGAACTGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVSKRCNEGGVRKETRNPRSAES*CKNWVA Trigger: GGCCACCCAGTTCTTGCACAAGGACTCGGCTGACCT...GGGGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS GCA 90 bp | GCTTCCTGTTCTTTCCTGGAGTCTCCCTCATCTCTCCTGGCCTCTTaGCCGGTGCTCATGGTCTTCTCTGAGATCTTCCCTGTTAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: ASCSFLESPSSLLAS*PVLMVFSEIFPVRR Trigger: GCGTCTAACAGGGAAGATCTCAGAGAAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAGACTCCAGGAAAGAACAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123867.8 ENSMUST00000147155.8 |
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| CDS CCA 90 bp | GAAGCGAAGCTTCCTGTTCTTTCCTGGAGTCTCCCTCATCTCTCCTaGCCTCTTGCCCGGTGCTCATGGTCTTCTCTGAGATCTTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAKLPVLSWSLPHLS*PLARCSWSSLRSSL Trigger: CAGGGAAGATCTCAGAGAAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAGACTCCAGGAAAGAACAGGAAGCTTCGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123867.8 ENSMUST00000147155.8 |
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| CDS-3UTR CAA 90 bp | ACATTGTCTCAAAGCGCTGCAATGAGGGAGGAGTCAGGAAAGAGACCAGGAACCAACTGGGTGGCCTGTTaGAGTTGGCGCTGCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSQSAAMREESGKRPGTNWVAC*SWRCWL Trigger: GAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGTT...GGTTCCTGGTCTCTTTCCTGACTCCTCCCTCATTGCAGCGCTTTGAGACAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CAA 90 bp | GTACCTTCTAGACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGAGGTCAGCCGAGTCCTaGTGCAAGAACTGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPSRPSPTYLSPPPSCKQRSAES*CKNWVA Trigger: GGCCACCCAGTTCTTGCACAAGGACTCGGCTGACCT...CTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTCTAGAAGGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CAA 90 bp | GACCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGGGTACAGCTCCACCAGGCGTCTTaGGATCACACTGTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DQVLLTCHPHPAVSRWVQLHQAS*DHTVWL Trigger: CAGCCACACAGTGTGATCCAAAGACGCCTGGTGGAG...CTGTACCCATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CAA 90 bp | AGTGACTTGGTTGTGCACTTGGGAAGGGATAAGAGAGAATGGGGAACCAGGGCCAGGTCAATGCAGCACTaGAGGGAGAGCAGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SDLVVHLGRDKREWGTRARSMQH*RESRVC Trigger: GCAGACCCTGCTCTCCCTCAAGTGCTGCATTGACCT...GGCCCTGGTTCCCCATTCTCTCTTATCCCTTCCCAAGTGCACAACCAAGTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| CDS GCA 90 bp | GTTCTTTCCTGGAGTCTCCCTCATCTCTCCTGGCCTCTTGCCCGGTaGTCATGGTCTTCTCTGAGATCTTCCCTGTTAGACGCTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLSWSLPHLSWPLAR*SWSSLRSSLLDAEV Trigger: GACTTCAGCGTCTAACAGGGAAGATCTCAGAGAAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAGACTCCAGGAAAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123867.8 ENSMUST00000147155.8 |
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| CDS-3UTR CAA 90 bp | ACCAGGGCCTCAGAGTCACAGATACTCTCGGTAGGAATTCCTAGGGCAGAAGGCATCTGGTCCTGGCACTaGCAGTTGACTAGCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TRASESQILSVGIPRAEGIWSWH*QLTSRA Trigger: AGCTCTGCTAGTCAACTGCAAGTGCCAGGACCAGAT...GCCTTCTGCCCTAGGAATTCCTACCGAGAGTATCTGTGACTCTGAGGCCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001561.12 |
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| CDS-3UTR CAA 90 bp | GAGTCAGGAAAGAGACCAGGAACCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAATCTGGTCCTGGCACTaGCAGTTGACTAGCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESGKRPGTPLPEPLESEEIWSWH*QLTSRA Trigger: AGCTCTGCTAGTCAACTGCAAGTGCCAGGACCAGAT...TTCTTCACTTTCGAGAGGCTCTGGGAGTGGGGTTCCTGGTCTCTTTCCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
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| CDS-3UTR CAA 90 bp | CCCCACTCCCAGAGCCTCTCGAAAGTGAAGAAAGTGAAGAAAGTGACACTTTCTCTCCACCAGGCGTCTTaGGATCACACTGTGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHSQSLSKVKKVKKVTLSLHQAS*DHTVWL Trigger: CAGCCACACAGTGTGATCCAAAGACGCCTGGTGGAG...AGAAAGTGTCACTTTCTTCACTTTCTTCACTTTCGAGAGGCTCTGGGAGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 |
||
| CDS-3UTR CAA 90 bp | CCAAGTCCTACTTACTTGTCACCCCCACCCAGCTGTAAGCAGATGGGTACAGGAAAGTCTAGAGCCCATTaGCTGGAGGTCCTTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPTYLSPPPSCKQMGTGKSRAH*LEVLFC Trigger: ACAGAAAAGGACCTCCAGCAAATGGGCTCTAGACTT...TCCTGTACCCATCTGCTTACAGCTGGGTGGGGGTGACAAGTAAGTAGGACTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120405.4 |
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| CDS GCA 90 bp | TTAATAAAGACAATTTATGGAGGTCACATGACAAGCTTTCATGAATaGTTTGGAAGTTTCGAGATGAATGTTCTCTCTTGGTACCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LIKTIYGGHMTSFHE*FGSFEMNVLSWYLS Trigger: AGAGAGGTACCAAGAGAGAACATTCATCTCGAAACTTCCAAAGCATTCATGAAAGCTTGTCATGTGACCTCCATAAATTGTCTTTATTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204836.2 |
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| CDS TCA 72 bp | CCACGGATCAGGGCCTGCAGCAGGGGAGACTCCCCCTaGAGCCGCCTCTGGTTTCCCTCCACCAGGCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PRIRACSRGDSP*SRLWFPSTRRL Trigger: AAGACGCCTGGTGGAGGGAAACCAGAGGCGGCTTCAGGGGGAGTCTCCCCTGCTGCAGGCCCTGATCCGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000147155.8 ENSMUST00000204836.2 |
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| CDS CCA 72 bp | GCTGGAACCTGTGTCGCACTGGTCCTGCTGCTGTCATaGCCACGGATCAGGGCCTGCAGCAGGGGAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGTCVALVLLLS*PRIRACSRGDS Trigger: GGAGTCTCCCCTGCTGCAGGCCCTGATCCGTGGCCATGACAGCAGCAGGACCAGTGCGACACAGGTTCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000204836.2 |
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| CDS TCA 72 bp | CAGCCGAGTCCTTGTGCAAGAACTGGGTGGCCTGTTTaGGTTGGCGCTGCTGGCTCAGGTGGGCTCGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QPSPCARTGWPV*VGAAGSGGLGP Trigger: GGGACCGAGCCCACCTGAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGTTCTTGCACAAGGACTCGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000147155.8 |
||
| CDS GCA 72 bp | CTAGCAGAGCTGGAACCTGTGTCGCACTGGTCCTGCTaGTGTCATGGCCACGGATCAGGGCCTGCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAELEPVSHWSC*CHGHGSGPAAG Trigger: CCCTGCTGCAGGCCCTGATCCGTGGCCATGACAGCAGCAGGACCAGTGCGACACAGGTTCCAGCTCTGCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000204836.2 |
||
| CDS GCA 72 bp | TTGTGCAAGAACTGGGTGGCCTGTTTGAGTTGGCGCTaGTGGCTCAGGTGGGCTCGGTCCCGAAGCGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCKNWVACLSWR*WLRWARSRSEA Trigger: AGCTTCGCTTCGGGACCGAGCCCACCTGAGCCAGCAGCGCCAACTCAAACAGGCCACCCAGTTCTTGCACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 ENSMUST00000147155.8 |
||
| CDS CAA 90 bp | AGACTCCCCCTGAAGCCGCCTCTGGTTTCCCTCCACCAGGCGTCTTaGGATCACACTGTGTGGCTGCAGGTCCTTAGAGGTGCCGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLPLKPPLVSLHQAS*DHTVWLQVLRGAES Trigger: AGACTCGGCACCTCTAAGGACCTGCAGCCACACAGTGTGATCCAAAGACGCCTGGTGGAGGGAAACCAGAGGCGGCTTCAGGGGGAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 |
||
| CDS GCA 72 bp | GTTGGGGTCGGAGATGTCTTGAGGGAGAGCAGGGTCTaGAGTCCCAGGCAAAATTCAGGGCTGTCCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: VGVGDVLRESRV*SPRQNSGLSTS Trigger: GGATGTGGACAGCCCTGAATTTTGCCTGGGACTGCAGACCCTGCTCTCCCTCAAGACATCTCCGACCCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204836.2 |
||
| CDS CAA 72 bp | CTGAAGCCGCCTCTGGTTTCCCTCCACCAGGCGTCTTaGGATCACACTGTGTGGCTGCAGGTCCTTAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LKPPLVSLHQAS*DHTVWLQVLRG Trigger: ACCTCTAAGGACCTGCAGCCACACAGTGTGATCCAAAGACGCCTGGTGGAGGGAAACCAGAGGCGGCTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001561.12 ENSMUST00000120405.4 ENSMUST00000123867.8 |
||
| CDS GCA 72 bp | TGGAGTCTCCCTCATCTCTCCTGGCCTCTTGCCCGGTaGTCATGGTCTTCTCTGAGATCTTCCCTGTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: WSLPHLSWPLAR*SWSSLRSSLLD Trigger: GTCTAACAGGGAAGATCTCAGAGAAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123867.8 ENSMUST00000147155.8 |
||
| CDS GCA 72 bp | TCTTTCCTGGAGTCTCCCTCATCTCTCCTGGCCTCTTaGCCGGTGCTCATGGTCTTCTCTGAGATCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SFLESPSSLLAS*PVLMVFSEIFP Trigger: AGGGAAGATCTCAGAGAAGACCATGAGCACCGGGCAAGAGGCCAGGAGAGATGAGGGAGACTCCAGGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123867.8 ENSMUST00000147155.8 |
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| CDS CAA 90 bp | TCTCTTGGTACCTCTCTCAGGTTCCCTTTCTCTCTTGCAGTTGACTaGTGTTGGGGTCGGAGATGTCTTGAGGGAGAGCAGGGTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLGTSLRFPFSLAVD*CWGRRCLEGEQGLQ Trigger: CTGCAGACCCTGCTCTCCCTCAAGACATCTCCGACCCCAACACAAGTCAACTGCAAGAGAGAAAGGGAACCTGAGAGAGGTACCAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204836.2 |
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| CDS CAA 72 bp | TCTCTCTTGGTACCTCTCTCAGGTTCCCTTTCTCTCTaGCAGTTGACTTGTGTTGGGGTCGGAGATGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLLVPLSGSLSL*QLTCVGVGDVL Trigger: CAAGACATCTCCGACCCCAACACAAGTCAACTGCAAGAGAGAAAGGGAACCTGAGAGAGGTACCAAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204836.2 |
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| CDS GCA 72 bp | ACAATTTATGGAGGTCACATGACAAGCTTTCATGAATaGTTTGGAAGTTTCGAGATGAATGTTCTCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: TIYGGHMTSFHE*FGSFEMNVLSW Trigger: CCAAGAGAGAACATTCATCTCGAAACTTCCAAAGCATTCATGAAAGCTTGTCATGTGACCTCCATAAATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204836.2 |
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