Pregenerated sensors for NRGN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053310Ensembl transcript IDs: ENSMUST00000065668.12
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATTGGGCGCCCTCTGCAGTACGCGCAGCGAAGCGCACCGAGGCTaGGGAGGCAGAGCTGCATGCTGGGCGCGTGGACAGGTGGGCGTG | + |
|
Preference number: 1 (lower is better) Translates to: ALGALCSTRSEAHRG*GGRAACWARGQVGV Trigger: CACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGCAGAGGGCGCCCAATGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR GCA 90 bp | CTGCAGTACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTaGATGCTGGGCGCGTGGACAGGTGGGCGTGAAGCAAAAGGACAT | + |
|
Preference number: 1 (lower is better) Translates to: LQYAQRSAPRLRRQS*MLGAWTGGREAKGH Trigger: ATGTCCTTTTGCTTCACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR CCA 90 bp | ACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTaGGCGCGTGGACAGGTGGGCGTGAAGCAAAAGGACATTTTTGGG | + |
|
Preference number: 1 (lower is better) Translates to: TRSEAHRGCGGRAAC*ARGQVGVKQKDIFG Trigger: CCCAAAAATGTCCTTTTGCTTCACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR GCA 90 bp | AGTACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATaGTGGGCGCGTGGACAGGTGGGCGTGAAGCAAAAGGACATTTTT | + |
|
Preference number: 1 (lower is better) Translates to: STRSEAHRGCGGRAA*WARGQVGVKQKDIF Trigger: AAAAATGTCCTTTTGCTTCACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR CCA 90 bp | CGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGGGCGCGTaGACAGGTGGGCGTGAAGCAAAAGGACATTTTTGGGAGTATGGG | + |
|
Preference number: 1 (lower is better) Translates to: RSAPRLRRQSCMLGA*TGGREAKGHFWEYG Trigger: CCCATACTCCCAAAAATGTCCTTTTGCTTCACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR GCA 90 bp | CGGAAGTCTCCTCCTGCCGGAGCCTCCAGGCGCTCAGGAGGCTTTTaGATAAACAAAGAAGAGCGGGAGGGGCTGCTCTCAGGGTGCGTT | + |
|
Preference number: 1 (lower is better) Translates to: RKSPPAGASRRSGGF*INKEEREGLLSGCV Trigger: AACGCACCCTGAGAGCAGCCCCTCCCGCTCTTCTTTGTTTATGCAAAAGCCTCCTGAGCGCCTGGAGGCTCCGGCAGGAGGAGACTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR GCA 90 bp | GGTGGGAAGGAGGGGCTCACAAACACAGTAGGGAAGTCTTGTCACTaGGAAGGGGACGCGGCATCCGACTCTCCTCTGGAACTTCTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: GGKEGLTNTVGKSCH*EGDAASDSPLELLK Trigger: TTTTAGAAGTTCCAGAGGAGAGTCGGATGCCGCGTCCCCTTCGCAGTGACAAGACTTCCCTACTGTGTTTGTGAGCCCCTCCTTCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGCTATCATGGGGCGGGGCTGCGGAAGTCTCCTCCTGCCGGAGCCTCCAGGGGCAGAGCTGCATGCTaGGCGCGTGGACAGGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RGYHGAGLRKSPPAGASRGRAAC*ARGQVG Trigger: GCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCC...CCTGGAGGCTCCGGCAGGAGGAGACTTCCGCAGCCCCGCCCCATGATAGCCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR GCA 90 bp | ACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGGGCGCGTGGGAAGTCTTGTCACTaGGAAGGGGACGCGGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: TRSEAHRGCGGRAACWARGKSCH*EGDAAS Trigger: GGATGCCGCGTCCCCTTCGCAGTGACAAGACTTCCC...ACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAGTACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGGCTCCTGAAGCTGGCTaGTTGGTGGGAAGGAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LQYAQRSAPRLRRQSCMLAPEAG*LVGRRG Trigger: GCCCCTCCTTCCCACCAACCAGCCAGCTTCAGGAGC...CAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGGGAAGACGAAGCCAGCCTaGGAGAGGGAGTCTCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: AVRAAKRTEAAEAELHAGKTKPA*ERESLG Trigger: TCCCAGAGACTCCCTCTCCCAGGCTGGCTTCGTCTT...CCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGGGAAGCTGGCTGGTTGGTaGGAAGGAGGGGCTCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: AVRAAKRTEAAEAELHAGKLAGW*EGGAHK Trigger: TTTGTGAGCCCCTCCTTCCCACCAACCAGCCAGCTT...CCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR CAA 90 bp | GCGGAAGTCTCCTCCTGCCGGAGCCTCCAGGCGCTCAGGAGGCTTTaGCATAAACAAAGAAGAGCGGGAGGGGCTGCTCTCAGGGTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: AEVSSCRSLQALRRL*HKQRRAGGAALRVR Trigger: ACGCACCCTGAGAGCAGCCCCTCCCGCTCTTCTTTGTTTATGCAAAAGCCTCCTGAGCGCCTGGAGGCTCCGGCAGGAGGAGACTTCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGGGGAGACCACGTTAGACTaGAGAGCTAAAAAGGGCACG | + |
|
Preference number: 2 (lower is better) Translates to: AVRAAKRTEAAEAELHAGETTLD*RAKKGT Trigger: CGTGCCCTTTTTAGCTCTTCAGTCTAACGTGGTCTC...CCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CCA 90 bp | GCTAGGGTGGAAAGACGCGGGCGCCCCCTTTCGTTGCCCACAGAACGAAAGGACCTGAAGCTGGCTGGTTaGTGGGAAGGAGGGGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ARVERRGRPLSLPTERKDLKLAG*WEGGAH Trigger: GTGAGCCCCTCCTTCCCACCAACCAGCCAGCTTCAG...GTCCTTTCGTTCTGTGGGCAACGAAAGGGGGCGCCCGCGTCTTTCCACCCTAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGCTATCATGGGGCGGGGCTGCGGAAGTCTCCTCCTGCCGGAGCCTCCAGGGGTGACAGGCAGGTATaGGATAGGACTTCACTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RGYHGAGLRKSPPAGASRGDRQV*DRTSLS Trigger: GGAAAGTGAAGTCCTATCCCATACCTGCCTGTCACC...CCTGGAGGCTCCGGCAGGAGGAGACTTCCGCAGCCCCGCCCCATGATAGCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR CAA 90 bp | GCTGGTTGGTGGGAAGGAGGGGCTCACAAACACAGTAGGGAAGTCTaGTCACTGCGAAGGGGACGCGGCATCCGACTCTCCTCTGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: AGWWEGGAHKHSREV*SLRRGRGIRLSSGT Trigger: AGTTCCAGAGGAGAGTCGGATGCCGCGTCCCCTTCGCAGTGACAAGACTTCCCTACTGTGTTTGTGAGCCCCTCCTTCCCACCAACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR GCA 72 bp | GCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTaGATGCTGGGCGCGTGGACAGGTGGGCGTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AQRSAPRLRRQS*MLGAWTGGREA Trigger: TGCTTCACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR GCA 72 bp | GCCCTCTGCAGTACGCGCAGCGAAGCGCACCGAGGCTaGGGAGGCAGAGCTGCATGCTGGGCGCGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: ALCSTRSEAHRG*GGRAACWARGQ Trigger: CTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGCAGAGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR GCA 72 bp | AGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATaGTGGGCGCGTGGACAGGTGGGCGTGAAGCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SEAHRGCGGRAA*WARGQVGVKQK Trigger: CTTTTGCTTCACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR CCA 72 bp | GAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTaGGCGCGTGGACAGGTGGGCGTGAAGCAAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EAHRGCGGRAAC*ARGQVGVKQKD Trigger: GTCCTTTTGCTTCACGCCCACCTGTCCACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGCTGCGGAAGTCTCCTCCTGCCGGAGCCTCCAGGCGCTCAGGAGGCTTTTCACAGTAGGGAAGTCTaGTCACTGCGAAGGGGACGC | + |
|
Preference number: 3 (lower is better) Translates to: RGCGSLLLPEPPGAQEAFHSREV*SLRRGR Trigger: GCGTCCCCTTCGCAGTGACAAGACTTCCCTACTGTG...AAAAGCCTCCTGAGCGCCTGGAGGCTCCGGCAGGAGGAGACTTCCGCAGCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR-3UTR CAA 90 bp | GCATGCTGGGCGCGTGGACAGGTGGGCGTGAAGCAAAAGGACATTTTTGGGAGTAAAAAGGGCACGGACTaGGCTACGCCAAGACGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ACWARGQVGVKQKDIFGSKKGTD*ATPRRS Trigger: GCTTCGTCTTGGCGTAGCCAAGTCCGTGCCCTTTTT...ACTCCCAAAAATGTCCTTTTGCTTCACGCCCACCTGTCCACGCGCCCAGCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS-3UTR CCA 90 bp | ACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGGGCGCGTTTCTTCCTCGCCATGTaGCCCCGGAAACTCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRSEAHRGCGGRAACWARFFLAM*PRKLAW Trigger: CCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAA...ACGCGCCCAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTACGCGCAGCGAAGCGCACCGAGGCTGCGGAGGCAGAGCTGCATGCTGAACTCGCCTGGATTTTaGCTGCAGCGGCGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQYAQRSAPRLRRQSCMLNSPGF*LQRRWL Trigger: GAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTT...CAGCATGCAGCTCTGCCTCCGCAGCCTCGGTGCGCTTCGCTGCGCGTACTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS-3UTR GCA 90 bp | CTAGGGTGGAAAGACGCGGGCGCCCCCTTTCGTTGCCCACAGAACGAAAGGACTCGCCTGGATTTTGGCTaGAGCGGCGTTGGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGWKDAGAPFRCPQNERTRLDFG*SGVGSG Trigger: CCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCG...AGTCCTTTCGTTCTGTGGGCAACGAAAGGGGGCGCCCGCGTCTTTCCACCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| 3UTR CAA 72 bp | TGGGAAGGAGGGGCTCACAAACACAGTAGGGAAGTCTaGTCACTGCGAAGGGGACGCGGCATCCGACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WEGGAHKHSREV*SLRRGRGIRLS Trigger: GGAGAGTCGGATGCCGCGTCCCCTTCGCAGTGACAAGACTTCCCTACTGTGTTTGTGAGCCCCTCCTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS-3UTR CCA 90 bp | CACATTCCAACCCAGTATGGTAACATGCACACGCAGAGATTAAAAACCTTCCAGAAGAATATCGTCGTCTaGCTTGGAGCAGGCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIPTQYGNMHTQRLKTFQKNIVV*LGAGAL Trigger: GAGAGCGCCTGCTCCAAGCCAGACGACGATATTCTT...CTGGAAGGTTTTTAATCTCTGCGTGTGCATGTTACCATACTGGGTTGGAATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS-3UTR CAA 90 bp | GGCTATCATGGGGCGGGGCTGCGGAAGTCTCCTCCTGCCGGAGCCTCCAGGCGCAAACTCGCCTGGATTTaGGCTGCAGCGGCGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYHGAGLRKSPPAGASRRKLAWI*AAAALA Trigger: AGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTT...GCGCCTGGAGGCTCCGGCAGGAGGAGACTTCCGCAGCCCCGCCCCATGATAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 90 bp | CCGCTCTTTATCTTCTTCCTCGCCATGTGGCCCCGGAAACTCGCCTaGATTTTGGCTGCAGCGGCGTTGGCTCCGGGATCATCCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLFIFFLAMWPRKLA*ILAAAALAPGSSSG Trigger: CCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAAGATAAAGAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 90 bp | CCCTTCCGGCCACACTCTCCGCTCTTTATCTTCTTCCTCGCCATGTaGCCCCGGAAACTCGCCTGGATTTTGGCTGCAGCGGCGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PFRPHSPLFIFFLAM*PRKLAWILAAAALA Trigger: AGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAAGATAAAGAGCGGAGAGTGTGGCCGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS GCA 90 bp | CTTCTTCCTCGCCATGTGGCCCCGGAAACTCGCCTGGATTTTGGCTaGAGCGGCGTTGGCTCCGGGATCATCCAGCGGGATGTCAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLPRHVAPETRLDFG*SGVGSGIIQRDVKN Trigger: ATTCTTGACATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 90 bp | CCATGTGGCCCCGGAAACTCGCCTGGATTTTGGCTGCAGCGGCGTTaGCTCCGGGATCATCCAGCGGGATGTCAAGAATATCGTCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PCGPGNSPGFWLQRR*LRDHPAGCQEYRRL Trigger: CAGACGACGATATTCTTGACATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 90 bp | TTATCTTCTTCCTCGCCATGTGGCCCCGGAAACTCGCCTGGATTTTaGCTGCAGCGGCGTTGGCTCCGGGATCATCCAGCGGGATGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSSSSPCGPGNSPGF*LQRRWLRDHPAGCQ Trigger: TTGACATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAAGATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS GCA 72 bp | CGCCATGTGGCCCCGGAAACTCGCCTGGATTTTGGCTaGAGCGGCGTTGGCTCCGGGATCATCCAGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RHVAPETRLDFG*SGVGSGIIQRD Trigger: ATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 72 bp | TCCTCGCCATGTGGCCCCGGAAACTCGCCTGGATTTTaGCTGCAGCGGCGTTGGCTCCGGGATCATCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSPCGPGNSPGF*LQRRWLRDHPA Trigger: CGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CAA 72 bp | TTCCTCGCCATGTGGCCCCGGAAACTCGCCTGGATTTaGGCTGCAGCGGCGTTGGCTCCGGGATCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLAMWPRKLAWI*AAAALAPGSSS Trigger: GCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 72 bp | ATCTTCTTCCTCGCCATGTGGCCCCGGAAACTCGCCTaGATTTTGGCTGCAGCGGCGTTGGCTCCGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: IFFLAMWPRKLA*ILAAAALAPGS Trigger: TGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CAA 90 bp | GCCATGTGGCCCCGGAAACTCGCCTGGATTTTGGCTGCAGCGGCGTaGGCTCCGGGATCATCCAGCGGGATGTCAAGAATATCGTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AMWPRKLAWILAAAA*APGSSSGMSRISSS Trigger: AGACGACGATATTCTTGACATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CAA 72 bp | CCCCGGAAACTCGCCTGGATTTTGGCTGCAGCGGCGTaGGCTCCGGGATCATCCAGCGGGATGTCAAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: PRKLAWILAAAA*APGSSSGMSRI Trigger: TATTCTTGACATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CAA 90 bp | TTTATCTTCTTCCTCGCCATGTGGCCCCGGAAACTCGCCTGGATTTaGGCTGCAGCGGCGTTGGCTCCGGGATCATCCAGCGGGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FIFFLAMWPRKLAWI*AAAALAPGSSSGMS Trigger: TGACATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAAGATAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 72 bp | GGGATCATCCAGCGGGATGTCAAGAATATCGTCGTCTaGCTTGGAGCAGGCGCTCTCCGTGCAGCAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GIIQRDVKNIVV*LGAGALRAAVH Trigger: ATGGACTGCTGCACGGAGAGCGCCTGCTCCAAGCCAGACGACGATATTCTTGACATCCCGCTGGATGATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 72 bp | CCCGGAAACTCGCCTGGATTTTGGCTGCAGCGGCGTTaGCTCCGGGATCATCCAGCGGGATGTCAAGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: PGNSPGFWLQRR*LRDHPAGCQEY Trigger: ATATTCTTGACATCCCGCTGGATGATCCCGGAGCCAACGCCGCTGCAGCCAAAATCCAGGCGAGTTTCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||
| CDS CCA 72 bp | CCACACTCTCCGCTCTTTATCTTCTTCCTCGCCATGTaGCCCCGGAAACTCGCCTGGATTTTGGCTGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PHSPLFIFFLAM*PRKLAWILAAA Trigger: CGCTGCAGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGAGGAAGAAGATAAAGAGCGGAGAGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065668.12 |
||